Search of human proteins with 211904185

Search of human proteins with 211904185

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|211904185 hypothetical protein LOC387890 [Homo sapiens]
         (109 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|211904185 hypothetical protein LOC387890 [Homo sapiens]            225   7e-60
gi|110578657 LOST1 [Homo sapiens]                                      84   3e-17
gi|156523246 proline-rich transmembrane protein 2 [Homo sapiens]       82   9e-17
gi|157743286 transmembrane protein 90A [Homo sapiens]                  41   2e-04
gi|13376347 hypothetical protein LOC79953 [Homo sapiens]               40   4e-04
gi|113421234 PREDICTED: similar to NG5 protein [Homo sapiens]          36   0.008
gi|113420954 PREDICTED: similar to NG5 protein [Homo sapiens]          36   0.008
gi|154707844 transmembrane protein 91 isoform a [Homo sapiens]         35   0.010
gi|70608168 interferon induced transmembrane protein 5 [Homo sap...    35   0.017
gi|169178462 PREDICTED: similar to NG5 protein [Homo sapiens]          33   0.038
gi|148612842 interferon-induced transmembrane protein 3 (1-8U) [...    32   0.11 
gi|150010589 interferon induced transmembrane protein 1 (9-27) [...    31   0.19 
gi|151101191 interferon induced transmembrane protein 2 (1-8D) [...    31   0.24 
gi|77681565 NG5 protein [Homo sapiens]                                 30   0.42 
gi|194272161 1D-myo-inositol-trisphosphate 3-kinase B [Homo sapi...    28   2.1  
gi|7662270 synaptic vesicle protein 2B homolog [Homo sapiens]          27   3.5  
gi|7669532 neuregulin 2 isoform 4 [Homo sapiens]                       27   4.6  
gi|20270327 transmembrane 4 L six family member 18 [Homo sapiens]      26   7.9  

>gi|211904185 hypothetical protein LOC387890 [Homo sapiens]
          Length = 109

 Score =  225 bits (573), Expect = 7e-60
 Identities = 109/109 (100%), Positives = 109/109 (100%)

Query: 1   MSQYAPSPDFKRALDSSPEANTEDDKTEEDVPMPKNYLWLTIVSCFCPAYPINIVALVFS 60
           MSQYAPSPDFKRALDSSPEANTEDDKTEEDVPMPKNYLWLTIVSCFCPAYPINIVALVFS
Sbjct: 1   MSQYAPSPDFKRALDSSPEANTEDDKTEEDVPMPKNYLWLTIVSCFCPAYPINIVALVFS 60

Query: 61  IMSLNSYNDGDYEGARRLGRNAKWVAIASIIIGLLIIGISCAVHFTRNA 109
           IMSLNSYNDGDYEGARRLGRNAKWVAIASIIIGLLIIGISCAVHFTRNA
Sbjct: 61  IMSLNSYNDGDYEGARRLGRNAKWVAIASIIIGLLIIGISCAVHFTRNA 109


>gi|110578657 LOST1 [Homo sapiens]
          Length = 177

 Score = 83.6 bits (205), Expect = 3e-17
 Identities = 40/102 (39%), Positives = 64/102 (62%)

Query: 5   APSPDFKRALDSSPEANTEDDKTEEDVPMPKNYLWLTIVSCFCPAYPINIVALVFSIMSL 64
           AP P       S   ++       +D   P++YL L +V+CFCP +P+N++ L+ SIMS 
Sbjct: 72  APLPRSPSRASSRRASSIATTSYAQDQEAPRDYLILAVVACFCPVWPLNLIPLIISIMSR 131

Query: 65  NSYNDGDYEGARRLGRNAKWVAIASIIIGLLIIGISCAVHFT 106
           +S   G+ +GARRLGR A+ ++I  II+G++II ++  V+FT
Sbjct: 132 SSMQQGNVDGARRLGRLARLLSITLIIMGIVIIMVAVTVNFT 173


>gi|156523246 proline-rich transmembrane protein 2 [Homo sapiens]
          Length = 340

 Score = 82.0 bits (201), Expect = 9e-17
 Identities = 36/76 (47%), Positives = 55/76 (72%)

Query: 29  EDVPMPKNYLWLTIVSCFCPAYPINIVALVFSIMSLNSYNDGDYEGARRLGRNAKWVAIA 88
           E    P++Y+ L I+SCFCP +P+NIVA  +++MS NS   GD +GA+RLGR AK ++I 
Sbjct: 260 EGTQKPRDYIILAILSCFCPMWPVNIVAFAYAVMSRNSLQQGDVDGAQRLGRVAKLLSIV 319

Query: 89  SIIIGLLIIGISCAVH 104
           +++ G+LII  SC ++
Sbjct: 320 ALVGGVLIIIASCVIN 335


>gi|157743286 transmembrane protein 90A [Homo sapiens]
          Length = 238

 Score = 41.2 bits (95), Expect = 2e-04
 Identities = 24/98 (24%), Positives = 51/98 (52%), Gaps = 4/98 (4%)

Query: 15  DSSPEANTEDDKTEEDVPMP-KNYLWLTIVSCFCPAYPINIVALVFSIMSLNSYNDGDYE 73
           + S   +TE +  +  + +P +++L LT+ S  C  +P+ I A  FS  +  + + GD+ 
Sbjct: 138 EESDATSTESESEDNFLTLPPRDHLGLTLFSMLCCFWPLGIAAFYFSQGTSKAISKGDFR 197

Query: 74  GARRLGRNAKWVAIASIIIG---LLIIGISCAVHFTRN 108
            A    R A ++A  +I +G    + + ++ A + ++N
Sbjct: 198 LASTTSRRALFLATLAIAVGAGLYVAVVVALAAYMSQN 235


>gi|13376347 hypothetical protein LOC79953 [Homo sapiens]
          Length = 258

 Score = 40.0 bits (92), Expect = 4e-04
 Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 2/91 (2%)

Query: 14  LDSSPEANTEDDKTEEDVPMPKNYLWLTIVSCFCPAYPINIVALVFSIMSLNSYNDGDYE 73
           L+S   ++TE +     +P P+++L L++ S  C  +P+ I A   S  +  +   GD  
Sbjct: 159 LESDYSSDTESEDNFLMMP-PRDHLGLSVFSMLCCFWPLGIAAFYLSHETNKAVAKGDLH 217

Query: 74  GARRLGRNAKWVAIASIIIGL-LIIGISCAV 103
            A    R A ++A+ SI IG  + +G++ A+
Sbjct: 218 QASTSSRRALFLAVLSITIGTGVYVGVAVAL 248


>gi|113421234 PREDICTED: similar to NG5 protein [Homo sapiens]
          Length = 288

 Score = 35.8 bits (81), Expect = 0.008
 Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 2/82 (2%)

Query: 16  SSPEANTEDDKTEEDVPMPKNYLWLTI-VSCFCPAYPINIVALVFSIMSLNSYNDGDYEG 74
           + P A      T E  P+PK+Y+  ++ V+ FC      ++A+V+S  +  +   GD   
Sbjct: 193 NGPMAGVPGPATVEHRPLPKDYMMESVLVTLFC-CLLTGLIAIVYSHEARAALGRGDLAQ 251

Query: 75  ARRLGRNAKWVAIASIIIGLLI 96
           A    R A+ + + S++ G+ +
Sbjct: 252 AEEASRKARSLVLFSLLFGVFV 273


>gi|113420954 PREDICTED: similar to NG5 protein [Homo sapiens]
          Length = 288

 Score = 35.8 bits (81), Expect = 0.008
 Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 2/82 (2%)

Query: 16  SSPEANTEDDKTEEDVPMPKNYLWLTI-VSCFCPAYPINIVALVFSIMSLNSYNDGDYEG 74
           + P A      T E  P+PK+Y+  ++ V+ FC      ++A+V+S  +  +   GD   
Sbjct: 193 NGPMAGVPGPATVEHRPLPKDYMMESVLVTLFC-CLLTGLIAIVYSHEARAALGRGDLAQ 251

Query: 75  ARRLGRNAKWVAIASIIIGLLI 96
           A    R A+ + + S++ G+ +
Sbjct: 252 AEEASRKARSLVLFSLLFGVFV 273


>gi|154707844 transmembrane protein 91 isoform a [Homo sapiens]
          Length = 172

 Score = 35.4 bits (80), Expect = 0.010
 Identities = 22/99 (22%), Positives = 42/99 (42%), Gaps = 7/99 (7%)

Query: 6   PSPDFKRALDSSPEANTEDDKTEEDVPMPKNYLWLTIVSCFCPAYPINIVALVFSIMSLN 65
           P P     + SS   +  D  +     +P ++L L + S  C  +P+ I A   +  +  
Sbjct: 64  PRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQKTNK 123

Query: 66  SYNDGDYEGARRLGRNAKWVAIASIIIGLLIIGISCAVH 104
           ++  GD +GA    R A        ++G+L +G+    +
Sbjct: 124 AWAKGDIQGAGAASRRA-------FLLGVLAVGLGVCTY 155


>gi|70608168 interferon induced transmembrane protein 5 [Homo
           sapiens]
          Length = 132

 Score = 34.7 bits (78), Expect = 0.017
 Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 7/85 (8%)

Query: 32  PMPKNYL-WLTIVSCFCPAYPINIVALVFSIMSLNSYNDGDYEGARRLGRNAK----WVA 86
           P P+++L W    + +     +  +AL +SI + +    GD E ARR G  AK      A
Sbjct: 31  PPPRDHLIWSVFSTLYLNLCCLGFLALAYSIKARDQKVVGDLEAARRFGSKAKCYNILAA 90

Query: 87  IASIIIGLLIIG--ISCAVHFTRNA 109
           + +++  LL++G  ++ A+H  R A
Sbjct: 91  MWTLVPPLLLLGLVVTGALHLARLA 115


>gi|169178462 PREDICTED: similar to NG5 protein [Homo sapiens]
          Length = 93

 Score = 33.5 bits (75), Expect = 0.038
 Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 2/71 (2%)

Query: 27 TEEDVPMPKNYLWLTI-VSCFCPAYPINIVALVFSIMSLNSYNDGDYEGARRLGRNAKWV 85
          T E  P+PK+Y+  ++ V+ FC      ++A+V+S  +  +   GD   A    R A+ +
Sbjct: 9  TVEHRPLPKDYMMESVLVTLFC-CLLTGLIAIVYSHEARAALGRGDLAQAEEASRKARSL 67

Query: 86 AIASIIIGLLI 96
           + S++ G+ +
Sbjct: 68 VLFSLLFGVFV 78


>gi|148612842 interferon-induced transmembrane protein 3 (1-8U)
           [Homo sapiens]
          Length = 133

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 16/67 (23%), Positives = 33/67 (49%)

Query: 30  DVPMPKNYLWLTIVSCFCPAYPINIVALVFSIMSLNSYNDGDYEGARRLGRNAKWVAIAS 89
           +  +P + +W    + F     +  +A  +S+ S +    GD  GA+     AK + I +
Sbjct: 51  ETSVPDHVVWSLFNTLFMNPCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWA 110

Query: 90  IIIGLLI 96
           +I+G+L+
Sbjct: 111 LILGILM 117


>gi|150010589 interferon induced transmembrane protein 1 (9-27)
          [Homo sapiens]
          Length = 125

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 16/67 (23%), Positives = 33/67 (49%)

Query: 30 DVPMPKNYLWLTIVSCFCPAYPINIVALVFSIMSLNSYNDGDYEGARRLGRNAKWVAIAS 89
          +  +P + +W    + F     +  +A  +S+ S +    GD  GA+     AK + I +
Sbjct: 30 ETSVPDHVVWSLFNTLFLNWCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWA 89

Query: 90 IIIGLLI 96
          +I+G+L+
Sbjct: 90 LILGILM 96


>gi|151101191 interferon induced transmembrane protein 2 (1-8D)
           [Homo sapiens]
          Length = 132

 Score = 30.8 bits (68), Expect = 0.24
 Identities = 15/67 (22%), Positives = 32/67 (47%)

Query: 30  DVPMPKNYLWLTIVSCFCPAYPINIVALVFSIMSLNSYNDGDYEGARRLGRNAKWVAIAS 89
           +  +P + +W    + F     +  +A  +S+ S +    GD  GA+     AK + I +
Sbjct: 50  ETSVPDHVVWSLFNTLFMNTCCLGFIAFAYSVKSRDRKMVGDVTGAQAYASTAKCLNIWA 109

Query: 90  IIIGLLI 96
           +I+G+ +
Sbjct: 110 LILGIFM 116


>gi|77681565 NG5 protein [Homo sapiens]
          Length = 306

 Score = 30.0 bits (66), Expect = 0.42
 Identities = 13/61 (21%), Positives = 30/61 (49%)

Query: 34  PKNYLWLTIVSCFCPAYPINIVALVFSIMSLNSYNDGDYEGARRLGRNAKWVAIASIIIG 93
           P +Y+ + +++  C  +P  I+A+  ++    +   GD   A    R A+  +  S+ +G
Sbjct: 220 PHDYMPIAVLTTICCFWPTGIIAIFKAVQVRTALARGDMVSAEIASREARNFSFISLAVG 279

Query: 94  L 94
           +
Sbjct: 280 I 280


>gi|194272161 1D-myo-inositol-trisphosphate 3-kinase B [Homo
           sapiens]
          Length = 946

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 10/35 (28%), Positives = 20/35 (57%)

Query: 10  FKRALDSSPEANTEDDKTEEDVPMPKNYLWLTIVS 44
           +++ ++  PEA TE++K +  V  P+   W   +S
Sbjct: 770 YQKMIEVDPEAPTEEEKAQRAVTKPRYMQWRETIS 804


>gi|7662270 synaptic vesicle protein 2B homolog [Homo sapiens]
          Length = 683

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 4  YAPSPDFKRALDSSPEANTEDDKTE 28
          YAPS  + R  +S+PE + + D TE
Sbjct: 13 YAPSDGYYRGNESNPEEDAQSDVTE 37


>gi|7669532 neuregulin 2 isoform 4 [Homo sapiens]
          Length = 852

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 15/65 (23%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 43  VSCFCPAYPINIVALVFSIMSLNSYNDGDYEGARRLGRNAKWVAIASIIIGLLIIGISCA 102
           +SC CP          F++++ + +   + + A  L +  + + I  I + LL++GI C 
Sbjct: 368 LSCKCPVGYTGDRCQQFAMVNFSKHLGFELKEAEELYQK-RVLTITGICVALLVVGIVCV 426

Query: 103 VHFTR 107
           V + +
Sbjct: 427 VAYCK 431


>gi|20270327 transmembrane 4 L six family member 18 [Homo sapiens]
          Length = 201

 Score = 25.8 bits (55), Expect = 7.9
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 5/65 (7%)

Query: 36  NYLWLTIVSCFCPAYPINIVALVFSIMSLNSYNDGDYEGARRLGRNAKWVAIASIIIGLL 95
           NY+W     CF       I+ L+ + + L   N+ +Y+  +    + K+V + SII   L
Sbjct: 45  NYVWYFEGICFS-----GIMMLIVTTVLLVLENNNNYKCCQSENCSKKYVTLLSIIFSSL 99

Query: 96  IIGIS 100
            I  S
Sbjct: 100 GIAFS 104


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.136    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,263,176
Number of Sequences: 37866
Number of extensions: 163348
Number of successful extensions: 532
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 516
Number of HSP's gapped (non-prelim): 18
length of query: 109
length of database: 18,247,518
effective HSP length: 79
effective length of query: 30
effective length of database: 15,256,104
effective search space: 457683120
effective search space used: 457683120
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.