Search of human proteins with 211904142

Search of human proteins with 211904142

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|211904142 DAZ associated protein 2 isoform d [Homo sapiens]
         (136 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|211904142 DAZ associated protein 2 isoform d [Homo sapiens]        295   1e-80
gi|7661886 DAZ associated protein 2 isoform a [Homo sapiens]          278   1e-75
gi|211904135 DAZ associated protein 2 isoform b [Homo sapiens]        270   3e-73
gi|211904149 DAZ associated protein 2 isoform f [Homo sapiens]        187   2e-48
gi|211904145 DAZ associated protein 2 isoform e [Homo sapiens]        169   6e-43
gi|211904140 DAZ associated protein 2 isoform c [Homo sapiens]        139   7e-34
gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens]             42   2e-04
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin...    42   2e-04
gi|150417989 cyclin K isoform 1 [Homo sapiens]                         41   3e-04
gi|118344450 cell death inducing protein [Homo sapiens]                41   3e-04
gi|163965366 nascent polypeptide-associated complex alpha subuni...    40   4e-04
gi|50345997 E1A binding protein p300 [Homo sapiens]                    38   0.003
gi|24430132 WW domain binding protein 2 [Homo sapiens]                 37   0.004
gi|21703710 scotin [Homo sapiens]                                      37   0.005
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ...    37   0.005
gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 ...    37   0.005
gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [...    37   0.005
gi|116256338 SEC31 homolog A isoform 1 [Homo sapiens]                  37   0.006
gi|41349441 SEC31 homolog A isoform 2 [Homo sapiens]                   37   0.006
gi|41349439 SEC31 homolog A isoform 1 [Homo sapiens]                   37   0.006
gi|21536320 heterogeneous nuclear ribonucleoprotein U-like 1 iso...    36   0.008
gi|21536326 heterogeneous nuclear ribonucleoprotein U-like 1 iso...    36   0.008
gi|57165375 glutamate receptor, ionotropic, N-methyl D-aspartate...    36   0.008
gi|57165373 glutamate receptor, ionotropic, N-methyl D-aspartate...    36   0.008
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap...    36   0.011
gi|239744142 PREDICTED: hypothetical protein isoform 1 [Homo sap...    36   0.011
gi|239744140 PREDICTED: hypothetical protein [Homo sapiens]            36   0.011
gi|169191513 PREDICTED: hypothetical protein isoform 1 [Homo sap...    36   0.011
gi|33356148 formin-like 1 [Homo sapiens]                               36   0.011
gi|150170710 hypothetical protein LOC728118 [Homo sapiens]             36   0.011

>gi|211904142 DAZ associated protein 2 isoform d [Homo sapiens]
          Length = 136

 Score =  295 bits (754), Expect = 1e-80
 Identities = 136/136 (100%), Positives = 136/136 (100%)

Query: 1   MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSESVAVGPLGSTIPMAYY 60
           MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSESVAVGPLGSTIPMAYY
Sbjct: 1   MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSESVAVGPLGSTIPMAYY 60

Query: 61  PVGPIYPPGSTVLVEGGYDAGARFGAGATAGNIPPPPPGCPPNAAQLAVMQGANVLVTQR 120
           PVGPIYPPGSTVLVEGGYDAGARFGAGATAGNIPPPPPGCPPNAAQLAVMQGANVLVTQR
Sbjct: 61  PVGPIYPPGSTVLVEGGYDAGARFGAGATAGNIPPPPPGCPPNAAQLAVMQGANVLVTQR 120

Query: 121 KGNFFMGGSDGGYTIW 136
           KGNFFMGGSDGGYTIW
Sbjct: 121 KGNFFMGGSDGGYTIW 136


>gi|7661886 DAZ associated protein 2 isoform a [Homo sapiens]
          Length = 168

 Score =  278 bits (711), Expect = 1e-75
 Identities = 136/168 (80%), Positives = 136/168 (80%), Gaps = 32/168 (19%)

Query: 1   MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSE---------------- 44
           MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSE                
Sbjct: 1   MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT 60

Query: 45  ----------------SVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGA 88
                           SVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGA
Sbjct: 61  MSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGA 120

Query: 89  TAGNIPPPPPGCPPNAAQLAVMQGANVLVTQRKGNFFMGGSDGGYTIW 136
           TAGNIPPPPPGCPPNAAQLAVMQGANVLVTQRKGNFFMGGSDGGYTIW
Sbjct: 121 TAGNIPPPPPGCPPNAAQLAVMQGANVLVTQRKGNFFMGGSDGGYTIW 168


>gi|211904135 DAZ associated protein 2 isoform b [Homo sapiens]
          Length = 146

 Score =  270 bits (690), Expect = 3e-73
 Identities = 127/146 (86%), Positives = 130/146 (89%), Gaps = 10/146 (6%)

Query: 1   MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSE----------SVAVGP 50
           MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSE          +  V  
Sbjct: 1   MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT 60

Query: 51  LGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGATAGNIPPPPPGCPPNAAQLAVM 110
           + + IPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGATAGNIPPPPPGCPPNAAQLAVM
Sbjct: 61  MSAAIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGATAGNIPPPPPGCPPNAAQLAVM 120

Query: 111 QGANVLVTQRKGNFFMGGSDGGYTIW 136
           QGANVLVTQRKGNFFMGGSDGGYTIW
Sbjct: 121 QGANVLVTQRKGNFFMGGSDGGYTIW 146


>gi|211904149 DAZ associated protein 2 isoform f [Homo sapiens]
          Length = 153

 Score =  187 bits (475), Expect = 2e-48
 Identities = 94/126 (74%), Positives = 94/126 (74%), Gaps = 32/126 (25%)

Query: 1   MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSE---------------- 44
           MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSE                
Sbjct: 1   MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT 60

Query: 45  ----------------SVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGA 88
                           SVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGA
Sbjct: 61  MSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGA 120

Query: 89  TAGNIP 94
           TAGNIP
Sbjct: 121 TAGNIP 126


>gi|211904145 DAZ associated protein 2 isoform e [Homo sapiens]
          Length = 86

 Score =  169 bits (428), Expect = 6e-43
 Identities = 86/136 (63%), Positives = 86/136 (63%), Gaps = 50/136 (36%)

Query: 1   MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSESVAVGPLGSTIPMAYY 60
           MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSE                
Sbjct: 1   MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSE---------------- 44

Query: 61  PVGPIYPPGSTVLVEGGYDAGARFGAGATAGNIPPPPPGCPPNAAQLAVMQGANVLVTQR 120
                                             PPPPGCPPNAAQLAVMQGANVLVTQR
Sbjct: 45  ----------------------------------PPPPGCPPNAAQLAVMQGANVLVTQR 70

Query: 121 KGNFFMGGSDGGYTIW 136
           KGNFFMGGSDGGYTIW
Sbjct: 71  KGNFFMGGSDGGYTIW 86


>gi|211904140 DAZ associated protein 2 isoform c [Homo sapiens]
          Length = 207

 Score =  139 bits (350), Expect = 7e-34
 Identities = 70/103 (67%), Positives = 70/103 (67%), Gaps = 32/103 (31%)

Query: 1   MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSE---------------- 44
           MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSE                
Sbjct: 1   MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT 60

Query: 45  ----------------SVAVGPLGSTIPMAYYPVGPIYPPGST 71
                           SVAVGPLGSTIPMAYYPVGPIYPP ST
Sbjct: 61  MSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPAST 103


>gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens]
          Length = 1970

 Score = 42.0 bits (97), Expect = 2e-04
 Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 6/64 (9%)

Query: 8    PTQPTY-PVQPPGNPVYPQTLHLPQAPPYTDAPPAYSESVAVGPLGSTIPMAYYPVGPIY 66
            PT P+Y P  P  +P  P+  + PQ+P YT + P+YS S    P  S     Y P  P Y
Sbjct: 1792 PTSPSYSPTSPSYSPSSPR--YTPQSPTYTPSSPSYSPS---SPSYSPTSPKYTPTSPSY 1846

Query: 67   PPGS 70
             P S
Sbjct: 1847 SPSS 1850



 Score = 39.3 bits (90), Expect = 0.001
 Identities = 27/69 (39%), Positives = 32/69 (46%), Gaps = 13/69 (18%)

Query: 8    PTQPTY----PVQPPGNPVYPQT--LHLPQAPPYTDAPPAYSESVAVGPLGSTIPMAYYP 61
            PT PTY    PV  P +P Y  T   + P +P Y+   P YS +    P GST    Y P
Sbjct: 1890 PTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT---SPKGST----YSP 1942

Query: 62   VGPIYPPGS 70
              P Y P S
Sbjct: 1943 TSPGYSPTS 1951



 Score = 36.6 bits (83), Expect = 0.006
 Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 3/63 (4%)

Query: 8    PTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSESVAVGPLGSTIPMAYYPVGPIYP 67
            PT P Y  + PG        + P +P Y+   P+YS +    P  S    +Y P  P Y 
Sbjct: 1595 PTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPT---SPNYSPTSPSYSPTSPSYS 1651

Query: 68   PGS 70
            P S
Sbjct: 1652 PTS 1654


>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
           tract binding protein associated) [Homo sapiens]
          Length = 707

 Score = 41.6 bits (96), Expect = 2e-04
 Identities = 32/102 (31%), Positives = 38/102 (37%), Gaps = 16/102 (15%)

Query: 6   QYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSESVAVGPLGSTIPMAYYPVGPI 65
           Q P Q   P QPP +P  P     P  PP   + P  ++     P   + P A     P 
Sbjct: 76  QPPPQQPPPHQPPPHP-QPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPA 134

Query: 66  YPPGSTVLVEGGYDAGARFGAGATAGNIPPP-----PPGCPP 102
            PP S          GA  G+G      PPP     PPG PP
Sbjct: 135 TPPTS----------GAPPGSGPGPTPTPPPAVTSAPPGAPP 166



 Score = 30.0 bits (66), Expect = 0.61
 Identities = 38/147 (25%), Positives = 51/147 (34%), Gaps = 34/147 (23%)

Query: 5   GQYPTQPTYPVQ-PPGNPV-YPQTLHLPQAPPYTDAPPAYSESV------------AVGP 50
           G  PT P      PPG P   P +  +P  PP    PP    +V              GP
Sbjct: 148 GPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGP 207

Query: 51  LGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGATAG---NIPP--------PPPG 99
            G  +P    P G     G  +   GG+      G G   G   + PP        PPPG
Sbjct: 208 KGGKMPGGPKPGG-----GPGLSTPGGHPKPPHRGGGEPRGGRQHHPPYHQQHHQGPPPG 262

Query: 100 CPPNAAQLAVMQG----ANVLVTQRKG 122
            P   ++  +       AN+ + +R G
Sbjct: 263 GPGGRSEEKISDSEGFKANLSLLRRPG 289


>gi|150417989 cyclin K isoform 1 [Homo sapiens]
          Length = 580

 Score = 41.2 bits (95), Expect = 3e-04
 Identities = 29/96 (30%), Positives = 35/96 (36%), Gaps = 4/96 (4%)

Query: 7   YPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSESVAVGPLGSTIPMAYYPVGPIY 66
           YP  P  P  PP    +P     P  P Y   PP Y+ +    P    +P  +    P +
Sbjct: 478 YPPNPPPPPVPPPPASFPPPAIPPPTPGYPPPPPTYNPNFPPPP--PRLPPTH--AVPPH 533

Query: 67  PPGSTVLVEGGYDAGARFGAGATAGNIPPPPPGCPP 102
           PP    L    Y   A    G      P PPPG PP
Sbjct: 534 PPPGLGLPPASYPPPAVPPGGQPPVPPPIPPPGMPP 569



 Score = 32.3 bits (72), Expect = 0.12
 Identities = 30/95 (31%), Positives = 32/95 (33%), Gaps = 21/95 (22%)

Query: 11  PTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSESVAVGPLGSTIPMAYYPVGPIYPPGS 70
           P+Y   PP    Y    HLP  P     PP         P  S  P A  P  P YPP  
Sbjct: 456 PSYGALPPA---YGPPAHLPYHPHVY--PPNPPPPPVPPPPASFPPPAIPPPTPGYPPPP 510

Query: 71  TVLVEGGYDAGARFGAGATAGNIPPPPPGCPPNAA 105
                  Y+            N PPPPP  PP  A
Sbjct: 511 PT-----YNP-----------NFPPPPPRLPPTHA 529



 Score = 27.7 bits (60), Expect = 3.0
 Identities = 27/98 (27%), Positives = 38/98 (38%), Gaps = 16/98 (16%)

Query: 17  PPGNPVYPQTLHLPQAPPYTDAPPAYSESVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEG 76
           PP  P +P  +H P  PP    PP    S  +  + +T   + Y  G  Y    +++   
Sbjct: 402 PP--PAHPAPVHQP--PPLPHRPPPPPPSSYMTGMSTT---SSYMSGEGYQSLQSMMKTE 454

Query: 77  GYDAGARFGAGATAGNIP---------PPPPGCPPNAA 105
           G   GA   A     ++P         PPPP  PP  A
Sbjct: 455 GPSYGALPPAYGPPAHLPYHPHVYPPNPPPPPVPPPPA 492


>gi|118344450 cell death inducing protein [Homo sapiens]
          Length = 208

 Score = 40.8 bits (94), Expect = 3e-04
 Identities = 35/114 (30%), Positives = 43/114 (37%), Gaps = 31/114 (27%)

Query: 14  PVQPPGNPVYPQTLHLPQAPPYTDAPPAYSESVAVGPLGSTIPMAYYPVGPIYPPGSTVL 73
           P +PPG+P+ PQ   +P   P+  A   Y       P G   PM YYP GP Y PG    
Sbjct: 53  PYEPPGHPM-PQPGFIP---PHMSADGTYMPPGFYPPPGPHPPMGYYPPGP-YTPG---- 103

Query: 74  VEGGYDAGARFGAGATAGNIPPPPPGCPPNAAQLAVMQGANVLVTQRKGNFFMG 127
                                 P PG   + A + V  GA   VT  +G  F G
Sbjct: 104 ----------------------PYPGPGGHTATVLVPSGAATTVTVLQGEIFEG 135


>gi|163965366 nascent polypeptide-associated complex alpha subunit
            isoform a [Homo sapiens]
          Length = 2078

 Score = 40.4 bits (93), Expect = 4e-04
 Identities = 32/104 (30%), Positives = 38/104 (36%), Gaps = 8/104 (7%)

Query: 8    PTQPTY-PVQPPGNPVYPQTLHLPQAPPYTDAPPAYSESVAVGPLGSTIPMAYYPVGPIY 66
            PT P   P  P G P  P     P  P  T   P  S +    P G++ P A  P  P  
Sbjct: 986  PTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKG 1045

Query: 67   PPGSTVLVEGGYDAGARF-----GAGATAG--NIPPPPPGCPPN 103
             P +T L +G     A       G  AT      P PP   PP+
Sbjct: 1046 SPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPS 1089



 Score = 32.0 bits (71), Expect = 0.16
 Identities = 26/93 (27%), Positives = 30/93 (32%), Gaps = 12/93 (12%)

Query: 8    PTQPTYPV-QPPGNPVYPQTLHLPQAPPYTDAPPAYSESVAVGPLGSTIPMAYYPVGPIY 66
            PT P   +  P G P  P     P  PP    P          P G+ +P A  P  P  
Sbjct: 1057 PTTPAATLPSPKGGPATPSLKGAP-TPPAATPPSPKGGPATPSPKGAPMPPAATPPSP-- 1113

Query: 67   PPGSTVLVEGGYDAGARFGAGATAGNIPPPPPG 99
                    +GG       GA  T    PP P G
Sbjct: 1114 --------KGGLATPPHKGAPTTPAATPPSPKG 1138



 Score = 29.6 bits (65), Expect = 0.79
 Identities = 28/99 (28%), Positives = 33/99 (33%), Gaps = 13/99 (13%)

Query: 4    KGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSESVAV-GPLGSTIPMAYYPV 62
            KG   T    P  P G    P     P  P  T  PP+    +A   P G+    A  P 
Sbjct: 1169 KGAPTTPAATPPSPKGGLATPSPKGAPTTPAAT--PPSPKGGLATPSPKGAPTTPAATPP 1226

Query: 63   GPIYPPGSTVLVEGGYDAGARFGAGATAGNIPPPPPGCP 101
             P          +GG    +  GA  T    PP P G P
Sbjct: 1227 SP----------KGGLATPSPKGAPTTPAATPPSPKGGP 1255



 Score = 28.1 bits (61), Expect = 2.3
 Identities = 26/98 (26%), Positives = 35/98 (35%), Gaps = 20/98 (20%)

Query: 11   PTYPVQPP---GNPVYPQTLHLPQAPPYTDA--------PPAYSESVAV-GPLGSTIPMA 58
            PT P   P   G P  P +   P  P  T +        PP+     A+  P G     A
Sbjct: 1347 PTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPA 1406

Query: 59   YYPVGPIYPPGSTVLVEGGYDAGARFGAGATAGNIPPP 96
              P+ P   P + V  EG         A  + G++ PP
Sbjct: 1407 VIPLSPKKAPATPVTREG--------AATPSKGDLTPP 1436


>gi|50345997 E1A binding protein p300 [Homo sapiens]
          Length = 2414

 Score = 37.7 bits (86), Expect = 0.003
 Identities = 35/115 (30%), Positives = 41/115 (35%), Gaps = 26/115 (22%)

Query: 8    PTQPTYPV-QPPGNPVYPQTLHLPQAPPYTDAPPAYSESVAVGPLGSTIPMAYYPVGPIY 66
            P  PT P  Q P  P  PQ    PQ  P    PP    + A GP+      A   V P  
Sbjct: 1852 PATPTTPTGQQPTTPQTPQPTSQPQPTPPNSMPPYLPRTQAAGPVSQ--GKAAGQVTPPT 1909

Query: 67   PPGSTVLVEGGYDAGARFGAGATAGNIPPPPPGCPPNAAQLAVMQGANVLVTQRK 121
            PP +                        PP PG PP A ++A MQ      TQR+
Sbjct: 1910 PPQTA----------------------QPPLPGPPPAAVEMA-MQIQRAAETQRQ 1941


>gi|24430132 WW domain binding protein 2 [Homo sapiens]
          Length = 261

 Score = 37.4 bits (85), Expect = 0.004
 Identities = 33/114 (28%), Positives = 39/114 (34%), Gaps = 32/114 (28%)

Query: 3   SKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSESVAVGPLGSTIPMAYYPV 62
           + G YP  P YP  PP    YP        PP  D    Y +           P   YP 
Sbjct: 160 ANGMYPCPPGYPYPPPPPEFYP-------GPPMMDGAMGYVQP----------PPPPYP- 201

Query: 63  GPIYPPGSTVLVEGGYDAGARFGAGATAG--------------NIPPPPPGCPP 102
           GP+ PP S   V     A A+    A +               + PPPPP  PP
Sbjct: 202 GPMEPPVSGPDVPSTPAAEAKAAEAAASAYYNPGNPHNVYMPTSQPPPPPYYPP 255


>gi|21703710 scotin [Homo sapiens]
          Length = 240

 Score = 37.0 bits (84), Expect = 0.005
 Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 2/45 (4%)

Query: 6   QYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSESVAVGP 50
           QYP  P YP QP G P Y +TL    A PY  + P Y+ +    P
Sbjct: 194 QYP--PPYPAQPMGPPAYHETLAGGAAAPYPASQPPYNPAYMDAP 236


>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3
           [Homo sapiens]
          Length = 1125

 Score = 37.0 bits (84), Expect = 0.005
 Identities = 31/95 (32%), Positives = 37/95 (38%), Gaps = 29/95 (30%)

Query: 8   PTQPTYPVQPPGNPV-YPQTLHLPQAPPYTDAPPAYSESVAVGPLGSTIPMAYYPVGPIY 66
           P     PV  P  PV  P T+  PQ PP+   PP          +G+  P A+ P   I 
Sbjct: 657 PIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPV---------VGALQPPAFTPPLGIP 707

Query: 67  PPGSTVLVEGGYDAGARFGAGATAGNIPPPPPGCP 101
           PPG              FG G     +PPPPP  P
Sbjct: 708 PPG--------------FGPG-----VPPPPPPPP 723



 Score = 29.6 bits (65), Expect = 0.79
 Identities = 36/132 (27%), Positives = 48/132 (36%), Gaps = 34/132 (25%)

Query: 5   GQYPTQPTYPVQPPG-NPVYPQTLHLPQAPPY-----TDAPPAYSESVAVGPL------- 51
           G  P  P  P   PG NP++     LP  PP         PP ++  +++  L       
Sbjct: 714 GVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNLVSGARGN 773

Query: 52  ----------GSTIPMA---YYPVGPIYPPGSTVLVEG-------GYDAGARFGAGATAG 91
                     GS +P A     P  P+  P S +  +G       G  A +    GA  G
Sbjct: 774 AESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPG 833

Query: 92  NIP-PPPPGCPP 102
            IP   PPG PP
Sbjct: 834 LIPLQRPPGMPP 845



 Score = 29.3 bits (64), Expect = 1.0
 Identities = 26/86 (30%), Positives = 31/86 (36%), Gaps = 12/86 (13%)

Query: 16  QPPGNPVYPQTLHLPQAPPYTDAPPAYSESVAVGPLGSTIPMAYYPVGPIYPPGSTVLVE 75
           +PPG P  P     P  PP    P         GP G  +P  +   GP +PP    +  
Sbjct: 839 RPPGMPP-PHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGP-FPPHGPFVRP 896

Query: 76  GGYDAGARFGAGATAGNIPPPPPGCP 101
           GG       G G      P P PG P
Sbjct: 897 GGMP-----GLGG-----PGPGPGGP 912


>gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2
           [Homo sapiens]
          Length = 1132

 Score = 37.0 bits (84), Expect = 0.005
 Identities = 31/95 (32%), Positives = 37/95 (38%), Gaps = 29/95 (30%)

Query: 8   PTQPTYPVQPPGNPV-YPQTLHLPQAPPYTDAPPAYSESVAVGPLGSTIPMAYYPVGPIY 66
           P     PV  P  PV  P T+  PQ PP+   PP          +G+  P A+ P   I 
Sbjct: 642 PIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPV---------VGALQPPAFTPPLGIP 692

Query: 67  PPGSTVLVEGGYDAGARFGAGATAGNIPPPPPGCP 101
           PPG              FG G     +PPPPP  P
Sbjct: 693 PPG--------------FGPG-----VPPPPPPPP 708



 Score = 29.3 bits (64), Expect = 1.0
 Identities = 26/86 (30%), Positives = 31/86 (36%), Gaps = 12/86 (13%)

Query: 16  QPPGNPVYPQTLHLPQAPPYTDAPPAYSESVAVGPLGSTIPMAYYPVGPIYPPGSTVLVE 75
           +PPG P  P     P  PP    P         GP G  +P  +   GP +PP    +  
Sbjct: 846 RPPGMPP-PHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGP-FPPHGPFVRP 903

Query: 76  GGYDAGARFGAGATAGNIPPPPPGCP 101
           GG       G G      P P PG P
Sbjct: 904 GGMP-----GLGG-----PGPGPGGP 919


>gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1
           [Homo sapiens]
          Length = 1147

 Score = 37.0 bits (84), Expect = 0.005
 Identities = 31/95 (32%), Positives = 37/95 (38%), Gaps = 29/95 (30%)

Query: 8   PTQPTYPVQPPGNPV-YPQTLHLPQAPPYTDAPPAYSESVAVGPLGSTIPMAYYPVGPIY 66
           P     PV  P  PV  P T+  PQ PP+   PP          +G+  P A+ P   I 
Sbjct: 657 PIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPV---------VGALQPPAFTPPLGIP 707

Query: 67  PPGSTVLVEGGYDAGARFGAGATAGNIPPPPPGCP 101
           PPG              FG G     +PPPPP  P
Sbjct: 708 PPG--------------FGPG-----VPPPPPPPP 723



 Score = 29.3 bits (64), Expect = 1.0
 Identities = 26/86 (30%), Positives = 31/86 (36%), Gaps = 12/86 (13%)

Query: 16  QPPGNPVYPQTLHLPQAPPYTDAPPAYSESVAVGPLGSTIPMAYYPVGPIYPPGSTVLVE 75
           +PPG P  P     P  PP    P         GP G  +P  +   GP +PP    +  
Sbjct: 861 RPPGMPP-PHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGP-FPPHGPFVRP 918

Query: 76  GGYDAGARFGAGATAGNIPPPPPGCP 101
           GG       G G      P P PG P
Sbjct: 919 GGMP-----GLGG-----PGPGPGGP 934


>gi|116256338 SEC31 homolog A isoform 1 [Homo sapiens]
          Length = 1220

 Score = 36.6 bits (83), Expect = 0.006
 Identities = 30/103 (29%), Positives = 43/103 (41%), Gaps = 10/103 (9%)

Query: 10  QPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAY-SESVAVGPLGSTIPMAYYPVGPIYPP 68
           +P  PV PP +  YP T ++  A  YT     Y ++  A  P  S  P   +P     PP
Sbjct: 894 RPQQPVAPPTSNAYPNTPYISSASSYTGQSQLYAAQHQASSPTSS--PATSFPP----PP 947

Query: 69  GSTVLVEGGYDAGARFGAGATAGNIPPPPPGCPPNAAQLAVMQ 111
            S    + G   G      ++A  +PP   G  P A++L   Q
Sbjct: 948 SSGASFQHG---GPGAPPSSSAYALPPGTTGTLPAASELPASQ 987


>gi|41349441 SEC31 homolog A isoform 2 [Homo sapiens]
          Length = 1181

 Score = 36.6 bits (83), Expect = 0.006
 Identities = 30/103 (29%), Positives = 43/103 (41%), Gaps = 10/103 (9%)

Query: 10  QPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAY-SESVAVGPLGSTIPMAYYPVGPIYPP 68
           +P  PV PP +  YP T ++  A  YT     Y ++  A  P  S  P   +P     PP
Sbjct: 855 RPQQPVAPPTSNAYPNTPYISSASSYTGQSQLYAAQHQASSPTSS--PATSFPP----PP 908

Query: 69  GSTVLVEGGYDAGARFGAGATAGNIPPPPPGCPPNAAQLAVMQ 111
            S    + G   G      ++A  +PP   G  P A++L   Q
Sbjct: 909 SSGASFQHG---GPGAPPSSSAYALPPGTTGTLPAASELPASQ 948


>gi|41349439 SEC31 homolog A isoform 1 [Homo sapiens]
          Length = 1220

 Score = 36.6 bits (83), Expect = 0.006
 Identities = 30/103 (29%), Positives = 43/103 (41%), Gaps = 10/103 (9%)

Query: 10  QPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAY-SESVAVGPLGSTIPMAYYPVGPIYPP 68
           +P  PV PP +  YP T ++  A  YT     Y ++  A  P  S  P   +P     PP
Sbjct: 894 RPQQPVAPPTSNAYPNTPYISSASSYTGQSQLYAAQHQASSPTSS--PATSFPP----PP 947

Query: 69  GSTVLVEGGYDAGARFGAGATAGNIPPPPPGCPPNAAQLAVMQ 111
            S    + G   G      ++A  +PP   G  P A++L   Q
Sbjct: 948 SSGASFQHG---GPGAPPSSSAYALPPGTTGTLPAASELPASQ 987


>gi|21536320 heterogeneous nuclear ribonucleoprotein U-like 1
           isoform d [Homo sapiens]
          Length = 756

 Score = 36.2 bits (82), Expect = 0.008
 Identities = 34/118 (28%), Positives = 42/118 (35%), Gaps = 12/118 (10%)

Query: 2   NSKGQY---PTQPTYPVQPPGNPVYPQTLHLPQAPPYTDA--PPAYSESVAVGPLGSTIP 56
           N++G Y   P Q   P QPP  P  P     P  P Y+ A  PP  S       +  +  
Sbjct: 583 NNRGSYNRAPQQQPPPQQPP--PPQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSA 640

Query: 57  MAYYPVGPIYPPGSTVLVEGGYDAGARFGAGATAGNIPPPPPGCPPNAAQLAVMQGAN 114
               P    Y P      +  Y+ G     G + G   PPPP  PP A       G N
Sbjct: 641 NTSTPTVSSYSPPQPSYSQPPYNQG-----GYSQGYTAPPPPPPPPPAYNYGSYGGYN 693


>gi|21536326 heterogeneous nuclear ribonucleoprotein U-like 1
           isoform a [Homo sapiens]
          Length = 856

 Score = 36.2 bits (82), Expect = 0.008
 Identities = 34/118 (28%), Positives = 42/118 (35%), Gaps = 12/118 (10%)

Query: 2   NSKGQY---PTQPTYPVQPPGNPVYPQTLHLPQAPPYTDA--PPAYSESVAVGPLGSTIP 56
           N++G Y   P Q   P QPP  P  P     P  P Y+ A  PP  S       +  +  
Sbjct: 683 NNRGSYNRAPQQQPPPQQPP--PPQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSA 740

Query: 57  MAYYPVGPIYPPGSTVLVEGGYDAGARFGAGATAGNIPPPPPGCPPNAAQLAVMQGAN 114
               P    Y P      +  Y+ G     G + G   PPPP  PP A       G N
Sbjct: 741 NTSTPTVSSYSPPQPSYSQPPYNQG-----GYSQGYTAPPPPPPPPPAYNYGSYGGYN 793


>gi|57165375 glutamate receptor, ionotropic, N-methyl
           D-aspartate-associated protein 1 [Homo sapiens]
          Length = 371

 Score = 36.2 bits (82), Expect = 0.008
 Identities = 36/103 (34%), Positives = 41/103 (39%), Gaps = 17/103 (16%)

Query: 7   YPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAP---PAYSESVAVGPLGSTIPMAYYPVG 63
           YP  P  P+ P   P YP   + PQ PP+  +P   P Y      GP  S  P   YP G
Sbjct: 21  YPGGPQPPMPPYAQPPYPGAPY-PQ-PPFQPSPYGQPGYPH----GP--SPYPQGGYPQG 72

Query: 64  PIYPPG---STVLVEGGYDAGARFGAGATAGNIPPPPPGCPPN 103
           P YP G        + GY  G     G   G  P  P   PPN
Sbjct: 73  P-YPQGGYPQGPYPQEGYPQGPYPQGGYPQGPYPQSP--FPPN 112



 Score = 33.9 bits (76), Expect = 0.042
 Identities = 32/90 (35%), Positives = 35/90 (38%), Gaps = 14/90 (15%)

Query: 13  YPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSESVAVGPLGSTIPMAYYPVG-PIYPPGST 71
           YP   PG P  PQ    P  PPY  A P Y  +    P     P    P G P YP G +
Sbjct: 14  YPPPNPGYPGGPQ----PPMPPY--AQPPYPGAPYPQP-----PFQPSPYGQPGYPHGPS 62

Query: 72  VLVEGGYDAGARFGAGATAGNIPPPPPGCP 101
              +GGY  G     G   G  P P  G P
Sbjct: 63  PYPQGGYPQGPYPQGGYPQG--PYPQEGYP 90


>gi|57165373 glutamate receptor, ionotropic, N-methyl
           D-aspartate-associated protein 1 [Homo sapiens]
          Length = 371

 Score = 36.2 bits (82), Expect = 0.008
 Identities = 36/103 (34%), Positives = 41/103 (39%), Gaps = 17/103 (16%)

Query: 7   YPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAP---PAYSESVAVGPLGSTIPMAYYPVG 63
           YP  P  P+ P   P YP   + PQ PP+  +P   P Y      GP  S  P   YP G
Sbjct: 21  YPGGPQPPMPPYAQPPYPGAPY-PQ-PPFQPSPYGQPGYPH----GP--SPYPQGGYPQG 72

Query: 64  PIYPPG---STVLVEGGYDAGARFGAGATAGNIPPPPPGCPPN 103
           P YP G        + GY  G     G   G  P  P   PPN
Sbjct: 73  P-YPQGGYPQGPYPQEGYPQGPYPQGGYPQGPYPQSP--FPPN 112



 Score = 33.9 bits (76), Expect = 0.042
 Identities = 32/90 (35%), Positives = 35/90 (38%), Gaps = 14/90 (15%)

Query: 13  YPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSESVAVGPLGSTIPMAYYPVG-PIYPPGST 71
           YP   PG P  PQ    P  PPY  A P Y  +    P     P    P G P YP G +
Sbjct: 14  YPPPNPGYPGGPQ----PPMPPY--AQPPYPGAPYPQP-----PFQPSPYGQPGYPHGPS 62

Query: 72  VLVEGGYDAGARFGAGATAGNIPPPPPGCP 101
              +GGY  G     G   G  P P  G P
Sbjct: 63  PYPQGGYPQGPYPQGGYPQG--PYPQEGYP 90


>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
           sapiens]
          Length = 505

 Score = 35.8 bits (81), Expect = 0.011
 Identities = 29/98 (29%), Positives = 36/98 (36%), Gaps = 27/98 (27%)

Query: 8   PTQPTYPVQPPGNPVYPQTLHLPQAPP---YTDAPPAYSESVAVGPLGSTIPMAYYPVGP 64
           P++      PP  P  P ++ +P  PP   Y   PPA   S   GP     P +   VGP
Sbjct: 314 PSRAPTAAPPPPPPSRP-SVAVPPPPPNRMYPPPPPALPSSAPSGP--PPPPPSVLGVGP 370

Query: 65  IYPPGSTVLVEGGYDAGARFGAGATAGNIPPPPPGCPP 102
           + PP                         PPPPPG PP
Sbjct: 371 VAPPPPPP---------------------PPPPPGPPP 387


>gi|239744142 PREDICTED: hypothetical protein isoform 1 [Homo
           sapiens]
          Length = 629

 Score = 35.8 bits (81), Expect = 0.011
 Identities = 33/93 (35%), Positives = 38/93 (40%), Gaps = 19/93 (20%)

Query: 18  PGNPVYPQTLHLPQAPPYTDAPPAYSESVAVGPLGSTIPMAYYPVGPIYPP---GSTVLV 74
           P      QTL L QAP    AP A    V   P    + +A  PV P+      G T   
Sbjct: 213 PVKAAQAQTLVLTQAPLVWQAPGALCGGVVCPP---PLLLAAAPVVPVMAAQVVGGTQAC 269

Query: 75  EGGYDAGARFGAGATAGNIPPPPPGCPPNAAQL 107
           EGG+  G           +P PPP  PP AAQL
Sbjct: 270 EGGWSQG-----------LPLPPP--PPPAAQL 289


>gi|239744140 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 878

 Score = 35.8 bits (81), Expect = 0.011
 Identities = 33/93 (35%), Positives = 38/93 (40%), Gaps = 19/93 (20%)

Query: 18  PGNPVYPQTLHLPQAPPYTDAPPAYSESVAVGPLGSTIPMAYYPVGPIYPP---GSTVLV 74
           P      QTL L QAP    AP A    V   P    + +A  PV P+      G T   
Sbjct: 213 PVKAAQAQTLVLTQAPLVWQAPGALCGGVVCPP---PLLLAAAPVVPVMAAQVVGGTQAC 269

Query: 75  EGGYDAGARFGAGATAGNIPPPPPGCPPNAAQL 107
           EGG+  G           +P PPP  PP AAQL
Sbjct: 270 EGGWSQG-----------LPLPPP--PPPAAQL 289


>gi|169191513 PREDICTED: hypothetical protein isoform 1 [Homo
           sapiens]
          Length = 878

 Score = 35.8 bits (81), Expect = 0.011
 Identities = 33/93 (35%), Positives = 38/93 (40%), Gaps = 19/93 (20%)

Query: 18  PGNPVYPQTLHLPQAPPYTDAPPAYSESVAVGPLGSTIPMAYYPVGPIYPP---GSTVLV 74
           P      QTL L QAP    AP A    V   P    + +A  PV P+      G T   
Sbjct: 213 PVKAAQAQTLVLTQAPLVWQAPGALCGGVVCPP---PLLLAAAPVVPVMAAQVVGGTQAC 269

Query: 75  EGGYDAGARFGAGATAGNIPPPPPGCPPNAAQL 107
           EGG+  G           +P PPP  PP AAQL
Sbjct: 270 EGGWSQG-----------LPLPPP--PPPAAQL 289


>gi|33356148 formin-like 1 [Homo sapiens]
          Length = 1100

 Score = 35.8 bits (81), Expect = 0.011
 Identities = 30/98 (30%), Positives = 33/98 (33%), Gaps = 16/98 (16%)

Query: 8   PTQPTYPVQPPGNPVYPQTLHLP-QAPPYTDAPPAYSESVAVGPLGSTIPMAYYPVGPIY 66
           P     P  PP  P  P     P  APP     P   E     PL   +P    P  P  
Sbjct: 536 PAPGAAPPPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLPGDLPPPPPPPPP-- 593

Query: 67  PPGSTVLVEGGYDAGARFGAGATAGNIPPPPPGCPPNA 104
           PPG+              G        PPPPPG PP+A
Sbjct: 594 PPGTD-------------GPVPPPPPPPPPPPGGPPDA 618


>gi|150170710 hypothetical protein LOC728118 [Homo sapiens]
          Length = 878

 Score = 35.8 bits (81), Expect = 0.011
 Identities = 33/93 (35%), Positives = 38/93 (40%), Gaps = 19/93 (20%)

Query: 18  PGNPVYPQTLHLPQAPPYTDAPPAYSESVAVGPLGSTIPMAYYPVGPIYPP---GSTVLV 74
           P      QTL L QAP    AP A    V   P    + +A  PV P+      G T   
Sbjct: 213 PVKAAQAQTLVLTQAPLVWQAPGALCGGVVCPP---PLLLAAAPVVPVMAAQVVGGTQAC 269

Query: 75  EGGYDAGARFGAGATAGNIPPPPPGCPPNAAQL 107
           EGG+  G           +P PPP  PP AAQL
Sbjct: 270 EGGWSQG-----------LPLPPP--PPPAAQL 289


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.138    0.446 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,355,042
Number of Sequences: 37866
Number of extensions: 535072
Number of successful extensions: 4695
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 169
Number of HSP's successfully gapped in prelim test: 425
Number of HSP's that attempted gapping in prelim test: 3311
Number of HSP's gapped (non-prelim): 1577
length of query: 136
length of database: 18,247,518
effective HSP length: 91
effective length of query: 45
effective length of database: 14,801,712
effective search space: 666077040
effective search space used: 666077040
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.