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Search of human proteins with 209977067
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|209977067 OTU domain containing 5 isoform c [Homo sapiens]
(349 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|209977067 OTU domain containing 5 isoform c [Homo sapiens] 716 0.0
gi|209977021 OTU domain containing 5 isoform b [Homo sapiens] 716 0.0
gi|209977019 OTU domain containing 5 isoform b [Homo sapiens] 716 0.0
gi|33457350 OTU domain containing 5 isoform a [Homo sapiens] 709 0.0
gi|223941923 OTU domain containing 1 [Homo sapiens] 55 9e-08
gi|149192871 OTU domain containing 3 [Homo sapiens] 52 6e-07
gi|46409282 OTU domain containing 6A [Homo sapiens] 47 3e-05
gi|157364937 OTU domain containing 6B [Homo sapiens] 42 6e-04
gi|239752744 PREDICTED: hypothetical protein [Homo sapiens] 39 0.007
gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi... 39 0.009
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 36 0.045
gi|124430752 kinesin family member 26B [Homo sapiens] 36 0.045
gi|4507379 TATA box binding protein [Homo sapiens] 36 0.059
gi|239750958 PREDICTED: hypothetical protein XP_002347630 [Homo ... 35 0.077
gi|239745364 PREDICTED: hypothetical protein XP_002343480 [Homo ... 35 0.077
gi|42476164 POU class 2 homeobox 1 [Homo sapiens] 35 0.100
gi|31543452 PX domain containing serine/threonine kinase [Homo s... 35 0.100
gi|238908524 hypothetical protein LOC389333 [Homo sapiens] 35 0.13
gi|169214926 PREDICTED: similar to IQ motif and SEC7 domain-cont... 35 0.13
gi|113428915 PREDICTED: similar to IQ motif and SEC7 domain-cont... 35 0.13
gi|156630992 OTU domain containing 4 protein isoform 3 [Homo sap... 34 0.17
gi|8923779 OTU domain containing 4 protein isoform 2 [Homo sapiens] 34 0.17
gi|40807496 OTU domain containing 4 protein isoform 1 [Homo sapi... 34 0.17
gi|116734702 homeobox D13 [Homo sapiens] 34 0.22
gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens] 34 0.22
gi|219275578 SIX homeobox 2 [Homo sapiens] 34 0.22
gi|32484977 angiomotin like 2 [Homo sapiens] 34 0.22
gi|87116683 proline/serine-rich coiled-coil 2 [Homo sapiens] 33 0.29
gi|111120318 NK6 transcription factor related, locus 1 [Homo sap... 33 0.38
gi|56118234 proline rich 6 [Homo sapiens] 33 0.38
>gi|209977067 OTU domain containing 5 isoform c [Homo sapiens]
Length = 349
Score = 716 bits (1847), Expect = 0.0
Identities = 349/349 (100%), Positives = 349/349 (100%)
Query: 1 MKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNN 60
MKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNN
Sbjct: 1 MKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNN 60
Query: 61 CHGNHIEMQAMAEMYNRPVEVYQYSTEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPN 120
CHGNHIEMQAMAEMYNRPVEVYQYSTEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPN
Sbjct: 61 CHGNHIEMQAMAEMYNRPVEVYQYSTEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPN 120
Query: 121 KATIGVGLGLPSFKPGFAEQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQV 180
KATIGVGLGLPSFKPGFAEQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQV
Sbjct: 121 KATIGVGLGLPSFKPGFAEQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQV 180
Query: 181 ARESYLQWLRDQEKQARQVRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSP 240
ARESYLQWLRDQEKQARQVRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSP
Sbjct: 181 ARESYLQWLRDQEKQARQVRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSP 240
Query: 241 EHPELHAELGMKPPSPGTVLALAKPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRAL 300
EHPELHAELGMKPPSPGTVLALAKPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRAL
Sbjct: 241 EHPELHAELGMKPPSPGTVLALAKPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRAL 300
Query: 301 IQQMSPSAFGLNDWDDDEILASVLAVSQQEYLDSMKKNKVHRDPPPDKS 349
IQQMSPSAFGLNDWDDDEILASVLAVSQQEYLDSMKKNKVHRDPPPDKS
Sbjct: 301 IQQMSPSAFGLNDWDDDEILASVLAVSQQEYLDSMKKNKVHRDPPPDKS 349
>gi|209977021 OTU domain containing 5 isoform b [Homo sapiens]
Length = 566
Score = 716 bits (1847), Expect = 0.0
Identities = 349/349 (100%), Positives = 349/349 (100%)
Query: 1 MKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNN 60
MKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNN
Sbjct: 218 MKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNN 277
Query: 61 CHGNHIEMQAMAEMYNRPVEVYQYSTEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPN 120
CHGNHIEMQAMAEMYNRPVEVYQYSTEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPN
Sbjct: 278 CHGNHIEMQAMAEMYNRPVEVYQYSTEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPN 337
Query: 121 KATIGVGLGLPSFKPGFAEQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQV 180
KATIGVGLGLPSFKPGFAEQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQV
Sbjct: 338 KATIGVGLGLPSFKPGFAEQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQV 397
Query: 181 ARESYLQWLRDQEKQARQVRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSP 240
ARESYLQWLRDQEKQARQVRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSP
Sbjct: 398 ARESYLQWLRDQEKQARQVRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSP 457
Query: 241 EHPELHAELGMKPPSPGTVLALAKPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRAL 300
EHPELHAELGMKPPSPGTVLALAKPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRAL
Sbjct: 458 EHPELHAELGMKPPSPGTVLALAKPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRAL 517
Query: 301 IQQMSPSAFGLNDWDDDEILASVLAVSQQEYLDSMKKNKVHRDPPPDKS 349
IQQMSPSAFGLNDWDDDEILASVLAVSQQEYLDSMKKNKVHRDPPPDKS
Sbjct: 518 IQQMSPSAFGLNDWDDDEILASVLAVSQQEYLDSMKKNKVHRDPPPDKS 566
>gi|209977019 OTU domain containing 5 isoform b [Homo sapiens]
Length = 566
Score = 716 bits (1847), Expect = 0.0
Identities = 349/349 (100%), Positives = 349/349 (100%)
Query: 1 MKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNN 60
MKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNN
Sbjct: 218 MKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNN 277
Query: 61 CHGNHIEMQAMAEMYNRPVEVYQYSTEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPN 120
CHGNHIEMQAMAEMYNRPVEVYQYSTEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPN
Sbjct: 278 CHGNHIEMQAMAEMYNRPVEVYQYSTEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPN 337
Query: 121 KATIGVGLGLPSFKPGFAEQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQV 180
KATIGVGLGLPSFKPGFAEQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQV
Sbjct: 338 KATIGVGLGLPSFKPGFAEQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQV 397
Query: 181 ARESYLQWLRDQEKQARQVRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSP 240
ARESYLQWLRDQEKQARQVRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSP
Sbjct: 398 ARESYLQWLRDQEKQARQVRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSP 457
Query: 241 EHPELHAELGMKPPSPGTVLALAKPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRAL 300
EHPELHAELGMKPPSPGTVLALAKPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRAL
Sbjct: 458 EHPELHAELGMKPPSPGTVLALAKPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRAL 517
Query: 301 IQQMSPSAFGLNDWDDDEILASVLAVSQQEYLDSMKKNKVHRDPPPDKS 349
IQQMSPSAFGLNDWDDDEILASVLAVSQQEYLDSMKKNKVHRDPPPDKS
Sbjct: 518 IQQMSPSAFGLNDWDDDEILASVLAVSQQEYLDSMKKNKVHRDPPPDKS 566
>gi|33457350 OTU domain containing 5 isoform a [Homo sapiens]
Length = 571
Score = 709 bits (1831), Expect = 0.0
Identities = 349/354 (98%), Positives = 349/354 (98%), Gaps = 5/354 (1%)
Query: 1 MKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNN 60
MKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNN
Sbjct: 218 MKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNN 277
Query: 61 CHGNHIEMQAMAEMYNRPVEVYQYST-----EPINTFHGIHQNEDEPIRVSYHRNIHYNS 115
CHGNHIEMQAMAEMYNRPVEVYQYST EPINTFHGIHQNEDEPIRVSYHRNIHYNS
Sbjct: 278 CHGNHIEMQAMAEMYNRPVEVYQYSTGTSAVEPINTFHGIHQNEDEPIRVSYHRNIHYNS 337
Query: 116 VVNPNKATIGVGLGLPSFKPGFAEQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEA 175
VVNPNKATIGVGLGLPSFKPGFAEQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEA
Sbjct: 338 VVNPNKATIGVGLGLPSFKPGFAEQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEA 397
Query: 176 IEEQVARESYLQWLRDQEKQARQVRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRS 235
IEEQVARESYLQWLRDQEKQARQVRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRS
Sbjct: 398 IEEQVARESYLQWLRDQEKQARQVRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRS 457
Query: 236 SASSPEHPELHAELGMKPPSPGTVLALAKPPSPCAPGTSSQFSAGADRATSPLVSLYPAL 295
SASSPEHPELHAELGMKPPSPGTVLALAKPPSPCAPGTSSQFSAGADRATSPLVSLYPAL
Sbjct: 458 SASSPEHPELHAELGMKPPSPGTVLALAKPPSPCAPGTSSQFSAGADRATSPLVSLYPAL 517
Query: 296 ECRALIQQMSPSAFGLNDWDDDEILASVLAVSQQEYLDSMKKNKVHRDPPPDKS 349
ECRALIQQMSPSAFGLNDWDDDEILASVLAVSQQEYLDSMKKNKVHRDPPPDKS
Sbjct: 518 ECRALIQQMSPSAFGLNDWDDDEILASVLAVSQQEYLDSMKKNKVHRDPPPDKS 571
>gi|223941923 OTU domain containing 1 [Homo sapiens]
Length = 481
Score = 55.1 bits (131), Expect = 9e-08
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 6/119 (5%)
Query: 4 DGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHG 63
DG CL+RAV+ VYGDQ +H +R+ + Y+ + D+FS + D +I ++
Sbjct: 317 DGNCLYRAVSKTVYGDQSLHRELREQTVHYIADHLDHFSPLIEGDVGEFIIAAAQDGAWA 376
Query: 64 NHIEMQAMAEMYNRPVEVY---QYSTEPINT---FHGIHQNEDEPIRVSYHRNIHYNSV 116
+ E+ AM +M N + + + + ++T + G + I +S+ N HY++V
Sbjct: 377 GYPELLAMGQMLNVNIHLTTGGRLESPTVSTMIHYLGPEDSLRPSIWLSWLSNGHYDAV 435
>gi|149192871 OTU domain containing 3 [Homo sapiens]
Length = 398
Score = 52.4 bits (124), Expect = 6e-07
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
Query: 4 DGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTED--FTTYINRKRKNNC 61
DG CLFRA+ DQ+ G H R+ +DY++K + F +V +D F ++ K
Sbjct: 73 DGNCLFRALGDQLEGHSRNHLKHRQETVDYMIKQREDFEPFVEDDIPFEKHVASLAKPGT 132
Query: 62 HGNHIEMQAMAEMYNRPVEVYQYSTEPINTFHGIHQNEDEPIRVSYHRNIHYNSV--VNP 119
+ + A A + V ++Q + P+ G ++ + ++Y HY+SV +N
Sbjct: 133 FAGNDAIVAFARNHQLNVVIHQLNA-PLWQIRGTEKSSVRELHIAYRYGEHYDSVRRIND 191
Query: 120 N 120
N
Sbjct: 192 N 192
>gi|46409282 OTU domain containing 6A [Homo sapiens]
Length = 288
Score = 47.0 bits (110), Expect = 3e-05
Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 31/134 (23%)
Query: 4 DGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNAD----YFSNYVT------EDFTTYI 53
DG C++RA+ DQ+ + E++R Y+ K+ D +FSN T +DF Y
Sbjct: 149 DGHCMYRAIQDQLVFSVSV-EMLRCRTASYMKKHVDEFLPFFSNPETSDSFGYDDFMIYC 207
Query: 54 NRKRKNNCHGNHIEMQAMAEMYNRPVEVYQ-----------YSTEPINTFHGIHQNEDEP 102
+ + G +E++A++ + P+EV Q Y +PI +
Sbjct: 208 DNIVRTTAWGGQLELRALSHVLKTPIEVIQADSPTLIIGEEYVKKPIILVY--------- 258
Query: 103 IRVSYHRNIHYNSV 116
+R +Y HYNSV
Sbjct: 259 LRYAYSLGEHYNSV 272
>gi|157364937 OTU domain containing 6B [Homo sapiens]
Length = 323
Score = 42.4 bits (98), Expect = 6e-04
Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 20/130 (15%)
Query: 4 DGACLFRAVADQVYGDQ----------DMHEVVRKHCMDYL--MKNADYFSNYVTEDFTT 51
DG C+++A+ DQ+ E ++ H D+L + N + Y E+F
Sbjct: 185 DGHCMYKAIEDQLKEKDCALTVVALRSQTAEYMQSHVEDFLPFLTNPNTGDMYTPEEFQK 244
Query: 52 YINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYSTEPINTFHGIHQNEDEPIRVSYHRNI 111
Y G +E++A++ + P+E+ Q + PI + +P+ + Y R+
Sbjct: 245 YCEDIVNTAAWGGQLELRALSHILQTPIEIIQADSPPIIVG---EEYSKKPLILVYMRHA 301
Query: 112 -----HYNSV 116
HYNSV
Sbjct: 302 YGLGEHYNSV 311
>gi|239752744 PREDICTED: hypothetical protein [Homo sapiens]
Length = 361
Score = 38.9 bits (89), Expect = 0.007
Identities = 29/87 (33%), Positives = 35/87 (40%), Gaps = 11/87 (12%)
Query: 201 GPSQPRKASATCSSATAAASSGLEEW--------TSRSPRQRSSASSPEHPELHAELGMK 252
GP P + + +AA W TS SPR+ + ELH ELG+
Sbjct: 63 GPRSPLPLTCKRKRSASAALPAAMHWNDAFWPALTSTSPRREKCGAFAAGLELHRELGLH 122
Query: 253 PPSPGTVLALAKPPSPCAP-GTSSQFS 278
P G A A P PCAP SQ S
Sbjct: 123 PLQAGA--AAAHTPYPCAPKSADSQLS 147
>gi|7662238 apoptotic chromatin condensation inducer 1 [Homo
sapiens]
Length = 1341
Score = 38.5 bits (88), Expect = 0.009
Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 27/157 (17%)
Query: 127 GLGLPSFKPGFAEQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYL 186
G +P KP + +M KT + EQ++LE R T + EA + +AR+
Sbjct: 308 GEEIPRVKP----EEMMDERPKTRSQ---EQEVLERGGRFT--RSQEEARKSHLARQQQE 358
Query: 187 QWLR------DQEKQARQVRG-------PSQPRKASATCSSATAAA--SSGLEEWTSRSP 231
+ ++ ++E++ + +G PS PR ++ A + EE T
Sbjct: 359 KEMKTTSPLEEEEREIKSSQGLKEKSKSPSPPRLTEDRKKASLVALPEQTASEEETPPPL 418
Query: 232 RQRSSASSPEHPELHAELGMKP---PSPGTVLALAKP 265
+ ++S P HP+LH+E ++P P+P ++ L+ P
Sbjct: 419 LTKEASSPPPHPQLHSEEEIEPMEGPAPPVLIQLSPP 455
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 36.2 bits (82), Expect = 0.045
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Query: 190 RDQEKQARQVRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSPEHPELHAEL 249
+ Q R G SQP+ S T + ++SS + S++P ++S +SS HP++ +
Sbjct: 789 KSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSG- 847
Query: 250 GMKPPSPGTVLALAKPPSPCAPGTSSQFSAGAD 282
PP G++ + P S F + D
Sbjct: 848 --TPPRQGSITSPQANEQSVTPQRRSCFESSPD 878
Score = 32.3 bits (72), Expect = 0.65
Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 18/108 (16%)
Query: 193 EKQARQVRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSPEHPELHAELGMK 252
+++ R S +S++ SS+++++SS +S S SS+SSP
Sbjct: 2602 KRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSP-----------S 2650
Query: 253 PPSPGTVLALAKPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRAL 300
P PG AL KP SP P G R+ SP + + R+L
Sbjct: 2651 PAKPGP-QALPKPASPKKP------PPGERRSRSPRKPIDSLRDSRSL 2691
>gi|124430752 kinesin family member 26B [Homo sapiens]
Length = 2108
Score = 36.2 bits (82), Expect = 0.045
Identities = 31/89 (34%), Positives = 39/89 (43%), Gaps = 10/89 (11%)
Query: 205 PRKASATCSSATAAASSGLEEWTSRSPRQRSSASSPEHPELHAELGMKPPSPGTVLALAK 264
P +AS + AA +S L E ++ E PEL A + SP A A
Sbjct: 956 PEQASRGPRLSQAAGASPLSESDKEDNGSEGQLTNREGPELPASKMQRSHSPVPAAAPAH 1015
Query: 265 PPSPCA----PGTSSQFSAGADRATSPLV 289
PSP + PG+SSQ SA SPLV
Sbjct: 1016 SPSPASPRSVPGSSSQHSA------SPLV 1038
>gi|4507379 TATA box binding protein [Homo sapiens]
Length = 339
Score = 35.8 bits (81), Expect = 0.059
Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 174 EAIEEQVARESYLQWLRDQEKQARQVRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQ 233
E + Q ++ Q + Q++Q +Q + Q ++ A A++ +++ TS+ Q
Sbjct: 53 EEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAAAVQQSTSQQATQ 112
Query: 234 RSSASSPEHPELHAELGMKPPSPGTVLALAKPPSPCAPGT 273
+S +P+ H++ P PGT P +P P T
Sbjct: 113 GTSGQAPQL--FHSQTLTTAPLPGTTPLYPSPMTPMTPIT 150
>gi|239750958 PREDICTED: hypothetical protein XP_002347630 [Homo
sapiens]
Length = 229
Score = 35.4 bits (80), Expect = 0.077
Identities = 30/92 (32%), Positives = 38/92 (41%), Gaps = 10/92 (10%)
Query: 200 RGPSQ---PRKASATCSSATAAASSGLEEWTSRSPRQRSSASSPEHPELHAELGMKPPSP 256
RGP Q PR A+ + + A SGL + R AS P P E G PP P
Sbjct: 7 RGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPE-GPGPPRP 65
Query: 257 GTVLALAKPPSPCAPGTSSQFSAGADRATSPL 288
T P + G S+ SAG + + PL
Sbjct: 66 AT------PSARRPQGLSAGVSAGPAQRSRPL 91
>gi|239745364 PREDICTED: hypothetical protein XP_002343480 [Homo
sapiens]
Length = 229
Score = 35.4 bits (80), Expect = 0.077
Identities = 30/92 (32%), Positives = 38/92 (41%), Gaps = 10/92 (10%)
Query: 200 RGPSQ---PRKASATCSSATAAASSGLEEWTSRSPRQRSSASSPEHPELHAELGMKPPSP 256
RGP Q PR A+ + + A SGL + R AS P P E G PP P
Sbjct: 7 RGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPE-GPGPPRP 65
Query: 257 GTVLALAKPPSPCAPGTSSQFSAGADRATSPL 288
T P + G S+ SAG + + PL
Sbjct: 66 AT------PSARRPQGLSAGVSAGPAQRSRPL 91
>gi|42476164 POU class 2 homeobox 1 [Homo sapiens]
Length = 743
Score = 35.0 bits (79), Expect = 0.100
Identities = 34/177 (19%), Positives = 76/177 (42%), Gaps = 23/177 (12%)
Query: 136 GFAEQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRDQEKQ 195
G + + + +I+T+ +E+ LE++K ++ E T A + + +E W ++ ++
Sbjct: 375 GLSRRRKKRTSIETNIRVALEKSFLENQKPTSE-EITMIADQLNMEKEVIRVWFCNRRQK 433
Query: 196 ARQVRGPSQPRKASA--------------------TCSSATAAASSGLEEWTSRSPRQRS 235
+++ PS +S+ T S+AT S + TS + S
Sbjct: 434 EKRINPPSSGGTSSSPIKAIFPSPTSLVATTPSLVTSSAATTLTVSPVLPLTSAAVTNLS 493
Query: 236 SASSPEHPELHAE--LGMKPPSPGTVLALAKPPSPCAPGTSSQFSAGADRATSPLVS 290
+ + + + PP+ V + + PSP A ++S+ S+ ++ +T+ S
Sbjct: 494 VTGTSDTTSNNTATVISTAPPASSAVTSPSLSPSPSASASTSEASSASETSTTQTTS 550
>gi|31543452 PX domain containing serine/threonine kinase [Homo
sapiens]
Length = 578
Score = 35.0 bits (79), Expect = 0.100
Identities = 31/140 (22%), Positives = 60/140 (42%), Gaps = 20/140 (14%)
Query: 132 SFKPGFAEQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRD 191
S KP F + +K A++ ++E IE++++E++K+ A + E
Sbjct: 404 SEKPQFKIPTKLKEALRIAKEC-IEKRLIEEQKQIHQHRRLTRAQSHHGSEE-------- 454
Query: 192 QEKQARQVRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSPEHPELHAELGM 251
E++ R++ + ++++ S EE +++ +SA S L +
Sbjct: 455 -ERKKRKILARKKSKRSALENS----------EEHSAKYSNSNNSAGSGASSPLTSPSSP 503
Query: 252 KPPSPGTVLALAKPPSPCAP 271
PPS + AL PP P P
Sbjct: 504 TPPSTSGISALPPPPPPPPP 523
>gi|238908524 hypothetical protein LOC389333 [Homo sapiens]
Length = 1015
Score = 34.7 bits (78), Expect = 0.13
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 19/125 (15%)
Query: 166 ATDWEATNEAIEEQVARESYLQWLRDQEKQARQVRGPSQPR-KASATCSSATAAASSGLE 224
+++WE N A+EE V+R S + Q Q V G P +A + +A + +E
Sbjct: 434 SSEWENQNPAVEETVSRRSPSPPILSQWNQC--VAGERSPSLEAPSLWEIPHSAVADAVE 491
Query: 225 EWTSRSPRQRSSASSPEHP----ELHAELGMKPPSPGTVLALAK------------PPSP 268
+S SP +P+ P + P PG+ +A + PP+P
Sbjct: 492 PRSSPSPPAFFPWEAPDRPIGTWGPSPQETWDPMGPGSSIAFTQEAQNGLTQEELAPPTP 551
Query: 269 CAPGT 273
APGT
Sbjct: 552 SAPGT 556
>gi|169214926 PREDICTED: similar to IQ motif and SEC7
domain-containing protein 3 [Homo sapiens]
Length = 185
Score = 34.7 bits (78), Expect = 0.13
Identities = 38/141 (26%), Positives = 59/141 (41%), Gaps = 16/141 (11%)
Query: 178 EQVARESYLQWLRDQEKQARQVRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRSSA 237
++++ E+ W Q QA+ G P A + ATA A++ + + QRS+A
Sbjct: 44 DELSTENRSLWEHQQLLQAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAA 103
Query: 238 S---SPEHP--ELHAELGMKPPSPGTVLALAKPPSPCAPGTSSQFSAGADRATSPLVSLY 292
+ +P+ P + H +L ++ P G P SP Q G A +
Sbjct: 104 APHPAPDRPPRQHHGQL-LEQPQRGPGSRAHTPQSP-------QKHLGTQGAVTDKEKER 155
Query: 293 PALECR---ALIQQMSPSAFG 310
P C AL+Q SPSA G
Sbjct: 156 PPSCCAAAGALLQHKSPSALG 176
>gi|113428915 PREDICTED: similar to IQ motif and SEC7
domain-containing protein 3 [Homo sapiens]
Length = 185
Score = 34.7 bits (78), Expect = 0.13
Identities = 38/141 (26%), Positives = 59/141 (41%), Gaps = 16/141 (11%)
Query: 178 EQVARESYLQWLRDQEKQARQVRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRSSA 237
++++ E+ W Q QA+ G P A + ATA A++ + + QRS+A
Sbjct: 44 DELSTENRSLWEHQQLLQAQPPPGLVPPSSAPLPAAPATAPAAAARAQEPLQDQGQRSAA 103
Query: 238 S---SPEHP--ELHAELGMKPPSPGTVLALAKPPSPCAPGTSSQFSAGADRATSPLVSLY 292
+ +P+ P + H +L ++ P G P SP Q G A +
Sbjct: 104 APHPAPDRPPRQHHGQL-LEQPQRGPGSRAHTPQSP-------QKHLGTQGAVTDKEKER 155
Query: 293 PALECR---ALIQQMSPSAFG 310
P C AL+Q SPSA G
Sbjct: 156 PPSCCAAAGALLQHKSPSALG 176
>gi|156630992 OTU domain containing 4 protein isoform 3 [Homo
sapiens]
Length = 1049
Score = 34.3 bits (77), Expect = 0.17
Identities = 20/88 (22%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Query: 30 CMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYSTEP- 88
C+ YL +N + F ++ F Y+ R +E+ A++ MY + +Y+ EP
Sbjct: 3 CIHYLRENREKFEAFIEGSFEEYLKRLENPQEWVGQVEISALSLMYRKDFIIYR---EPN 59
Query: 89 INTFHGIHQNEDEPIRVSYHRNIHYNSV 116
++ N E + + + HY+ V
Sbjct: 60 VSPSQVTENNFPEKVLLCFSNGNHYDIV 87
>gi|8923779 OTU domain containing 4 protein isoform 2 [Homo sapiens]
Length = 145
Score = 34.3 bits (77), Expect = 0.17
Identities = 20/88 (22%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Query: 30 CMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYSTEP- 88
C+ YL +N + F ++ F Y+ R +E+ A++ MY + +Y+ EP
Sbjct: 3 CIHYLRENREKFEAFIEGSFEEYLKRLENPQEWVGQVEISALSLMYRKDFIIYR---EPN 59
Query: 89 INTFHGIHQNEDEPIRVSYHRNIHYNSV 116
++ N E + + + HY+ V
Sbjct: 60 VSPSQVTENNFPEKVLLCFSNGNHYDIV 87
>gi|40807496 OTU domain containing 4 protein isoform 1 [Homo
sapiens]
Length = 1048
Score = 34.3 bits (77), Expect = 0.17
Identities = 20/88 (22%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Query: 30 CMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYSTEP- 88
C+ YL +N + F ++ F Y+ R +E+ A++ MY + +Y+ EP
Sbjct: 3 CIHYLRENREKFEAFIEGSFEEYLKRLENPQEWVGQVEISALSLMYRKDFIIYR---EPN 59
Query: 89 INTFHGIHQNEDEPIRVSYHRNIHYNSV 116
++ N E + + + HY+ V
Sbjct: 60 VSPSQVTENNFPEKVLLCFSNGNHYDIV 87
>gi|116734702 homeobox D13 [Homo sapiens]
Length = 343
Score = 33.9 bits (76), Expect = 0.22
Identities = 29/86 (33%), Positives = 36/86 (41%), Gaps = 8/86 (9%)
Query: 201 GPSQPRKASATCSSATAAASS------GLEEWTSRSPRQRSSASSPEHPELHAELGMKPP 254
G R A+A ++A AAA++ G E T S SSA PE A + P
Sbjct: 51 GTHSGRAAAAAAAAAAAAAAASGFAYPGTSERTGSSSSSSSSAVVAARPE--APPAKECP 108
Query: 255 SPGTVLALAKPPSPCAPGTSSQFSAG 280
+P A A PPS A G F G
Sbjct: 109 APTPAAAAAAPPSAPALGYGYHFGNG 134
>gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens]
Length = 2115
Score = 33.9 bits (76), Expect = 0.22
Identities = 35/117 (29%), Positives = 51/117 (43%), Gaps = 6/117 (5%)
Query: 127 GLGLPSFKPGFAEQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVA-RESY 185
G G S G E + K +E S +EQQ + +++A E + EA A R+S
Sbjct: 1104 GSGAQSEAAGRTEPTGPKLEALRAEVSKLEQQCQKQQEQADSLERSLEAERASRAERDSA 1163
Query: 186 LQWLRDQEKQARQVRGPSQPRKASATCSSATAAA-----SSGLEEWTSRSPRQRSSA 237
L+ L+ Q ++ Q G SQ ASA A S +EW ++ R R A
Sbjct: 1164 LETLQGQLEEKAQELGHSQSALASAQRELAAFRTKVQDHSKAEDEWKAQVARGRQEA 1220
>gi|219275578 SIX homeobox 2 [Homo sapiens]
Length = 291
Score = 33.9 bits (76), Expect = 0.22
Identities = 22/97 (22%), Positives = 41/97 (42%), Gaps = 3/97 (3%)
Query: 188 WLRDQEKQARQVRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSPEHPELHA 247
W +++ ++ R + ++ +S SG S S +++ + +P+H
Sbjct: 171 WFKNRRQRDRAAEAKERENNENSNSNSHNPLNGSGKSVLGS-SEDEKTPSGTPDHSSSSP 229
Query: 248 ELGMKPPSPG--TVLALAKPPSPCAPGTSSQFSAGAD 282
L + PP PG ++ +L PP P A GAD
Sbjct: 230 ALLLSPPPPGLPSLHSLGHPPGPSAVPVPVPGGGGAD 266
>gi|32484977 angiomotin like 2 [Homo sapiens]
Length = 780
Score = 33.9 bits (76), Expect = 0.22
Identities = 39/186 (20%), Positives = 79/186 (42%), Gaps = 31/186 (16%)
Query: 139 EQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVA-RESYLQWLRDQEKQ-- 195
+ +L++++ + S S + +L R + E+ + + Q+ +++ ++ L+ + ++
Sbjct: 595 DTTLIRHSPQPSPSSSFNEGLLTGGHRHQEMESRLKVLHAQILEKDAVIKVLQQRSRRDP 654
Query: 196 ARQVRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSPEH------------- 242
+ ++G +P K+ S AAA++G + W S +R +A +P
Sbjct: 655 GKAIQGSLRPAKS---VPSVFAAAAAGTQGWQGLSSSERQTADAPARLTTADRAPTEEPV 711
Query: 243 ----PELHAELGMKP-------PSPGTVLALAKPPSPCAPGTSSQFSAGADR-ATSPLVS 290
P HA+ G + P T L P +SSQ +A D ATS +
Sbjct: 712 VTAPPAAHAKHGSRDGSTQTEGPPDSTSTCLPPEPDSLLGCSSSQRAASLDSVATSRVQD 771
Query: 291 LYPALE 296
L +E
Sbjct: 772 LSDMVE 777
>gi|87116683 proline/serine-rich coiled-coil 2 [Homo sapiens]
Length = 1989
Score = 33.5 bits (75), Expect = 0.29
Identities = 45/177 (25%), Positives = 70/177 (39%), Gaps = 24/177 (13%)
Query: 138 AEQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRDQEKQAR 197
A+Q+L K K ++ ++QQ +++++ D E EE+ RE ++ +RD Q
Sbjct: 427 AKQALRKQQTKAWKK--LQQQKEQERQKEEDQRKQAEE-EERRKREEEIRKIRDLSNQEE 483
Query: 198 Q-------VRGPSQPRKASA------------TCSSATAAASSGLEEWTSRSPRQRSS-A 237
Q V G + R S+ T S EE + + SS A
Sbjct: 484 QYNRFMKLVGGKRRSRSKSSDPDLRRSLDKQPTDSGGGIYQYDNYEEVAMDTDSETSSPA 543
Query: 238 SSPEHPELHAELGMKPPSPGTVLALAKPPSPCA-PGTSSQFSAGADRATSPLVSLYP 293
SP P +E + SP L+L PP + P S + G + PL L P
Sbjct: 544 PSPVQPPFFSECSLGYFSPAPSLSLPPPPQVSSLPPLSQPYVEGLCVSLEPLPPLPP 600
>gi|111120318 NK6 transcription factor related, locus 1 [Homo
sapiens]
Length = 367
Score = 33.1 bits (74), Expect = 0.38
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 230 SPRQRSSASSPEHP-ELHAELGMKPPSPGTVLALAKPPSPCAPGTSSQFSAGADRATSPL 288
S SS+SSP P H G+KPP+ G + +L PP + T + R + P+
Sbjct: 50 SSSSSSSSSSPSPPLGTHNPGGLKPPATGGLSSLGSPPQQLSAATPHGINDILSRPSMPV 109
Query: 289 VS 290
S
Sbjct: 110 AS 111
Score = 30.0 bits (66), Expect = 3.2
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 16/91 (17%)
Query: 201 GPSQPRKASATCSSATAAASSGLEEWTSRS---------PRQRSSASSPEHPELHAELGM 251
G S +SA+ SSA+AAA++ + S PR S + P P L+
Sbjct: 122 GSSSSSSSSASASSASAAAAAAAAAAAAASSPAGLLAGLPRFSSLSPPPPPPGLYFS--- 178
Query: 252 KPPSPGTVLALAKPPSPCA--PGTSSQFSAG 280
PS V A+ + P P A PG + F G
Sbjct: 179 --PSAAAVAAVGRYPKPLAELPGRTPIFWPG 207
>gi|56118234 proline rich 6 [Homo sapiens]
Length = 272
Score = 33.1 bits (74), Expect = 0.38
Identities = 28/110 (25%), Positives = 42/110 (38%), Gaps = 22/110 (20%)
Query: 190 RDQEKQARQVRGPSQPRKASATCSSATAAA-----------------SSGLEEWTSRSPR 232
R + A ++RG + ++A +SA AA S +E+ S PR
Sbjct: 3 RSRSSAAAKLRGQKRSGASAAPAASAAAALAPSATRTRRSASQAGSKSQAVEKPPSEKPR 62
Query: 233 QRSSASSPEHPELHAELGMKPPSPGTVLALAKPPSPCAPGTSSQFSAGAD 282
R S+ P E +PP P L PP P P T + ++ D
Sbjct: 63 LRRSS-----PRAQEEGPGEPPPPELALLPPPPPPPPTPATPTSSASNLD 107
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.127 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,783,713
Number of Sequences: 37866
Number of extensions: 676585
Number of successful extensions: 3648
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 227
Number of HSP's that attempted gapping in prelim test: 3458
Number of HSP's gapped (non-prelim): 418
length of query: 349
length of database: 18,247,518
effective HSP length: 103
effective length of query: 246
effective length of database: 14,347,320
effective search space: 3529440720
effective search space used: 3529440720
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.