BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|209571533 solute carrier family 46, member 3 isoform b [Homo sapiens] (463 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|209571533 solute carrier family 46, member 3 isoform b [Homo ... 926 0.0 gi|32401447 solute carrier family 46, member 3 isoform a [Homo s... 921 0.0 gi|31543204 proton-coupled folate transporter [Homo sapiens] 223 3e-58 gi|223029454 solute carrier family 46, member 2 [Homo sapiens] 160 2e-39 gi|94721311 hippocampus abundant transcript-like 1 [Homo sapiens] 40 0.004 gi|217416366 major facilitator superfamily domain containing 9 [... 35 0.14 gi|39753965 hippocampus abundant transcript 1 [Homo sapiens] 35 0.14 gi|47933389 solute carrier family 2, member 9 protein isoform 2 ... 33 0.55 gi|47933387 solute carrier family 2, member 9 protein isoform 1 ... 33 0.55 gi|22748751 solute carrier family 43, member 2 [Homo sapiens] 33 0.71 gi|4557803 Niemann-Pick disease, type C1 precursor [Homo sapiens] 32 1.2 gi|45504369 solute carrier family 24, member 5 [Homo sapiens] 32 1.6 gi|45269141 multimerin 1 [Homo sapiens] 31 2.7 gi|24497490 solute carrier family 22 member 4 [Homo sapiens] 30 3.5 gi|68223315 CD47 antigen isoform 3 precursor [Homo sapiens] 30 4.6 gi|38683836 CD47 antigen isoform 2 precursor [Homo sapiens] 30 4.6 gi|4502673 CD47 antigen isoform 1 precursor [Homo sapiens] 30 4.6 gi|4507011 glucose transporter 4 [Homo sapiens] 30 6.0 gi|239748531 PREDICTED: similar to hCG1820960 [Homo sapiens] 30 6.0 gi|52317194 olfactory receptor, family 2, subfamily D, member 3 ... 30 6.0 >gi|209571533 solute carrier family 46, member 3 isoform b [Homo sapiens] Length = 463 Score = 926 bits (2394), Expect = 0.0 Identities = 463/463 (100%), Positives = 463/463 (100%) Query: 1 MKILFVEPAIFLSAFAMTLTGPLTTQYVYRRIWEETGNYTFSSDSNISECEKNKSSPIFA 60 MKILFVEPAIFLSAFAMTLTGPLTTQYVYRRIWEETGNYTFSSDSNISECEKNKSSPIFA Sbjct: 1 MKILFVEPAIFLSAFAMTLTGPLTTQYVYRRIWEETGNYTFSSDSNISECEKNKSSPIFA 60 Query: 61 FQEEVQKKVSRFNLQMDISGLIPGLVSTFILLSISDHYGRKFPMILSSVGALATSVWLCL 120 FQEEVQKKVSRFNLQMDISGLIPGLVSTFILLSISDHYGRKFPMILSSVGALATSVWLCL Sbjct: 61 FQEEVQKKVSRFNLQMDISGLIPGLVSTFILLSISDHYGRKFPMILSSVGALATSVWLCL 120 Query: 121 LCYFAFPFQLLIASTFIGAFCGNYTTFWGACFAYIVDQCKEHKQKTIRIAIIDFLLGLVT 180 LCYFAFPFQLLIASTFIGAFCGNYTTFWGACFAYIVDQCKEHKQKTIRIAIIDFLLGLVT Sbjct: 121 LCYFAFPFQLLIASTFIGAFCGNYTTFWGACFAYIVDQCKEHKQKTIRIAIIDFLLGLVT 180 Query: 181 GLTGLSSGYFIRELGFEWSFLIIAVSLAVNLIYILFFLGDPVKECSSQNVTMSCSEGFKN 240 GLTGLSSGYFIRELGFEWSFLIIAVSLAVNLIYILFFLGDPVKECSSQNVTMSCSEGFKN Sbjct: 181 GLTGLSSGYFIRELGFEWSFLIIAVSLAVNLIYILFFLGDPVKECSSQNVTMSCSEGFKN 240 Query: 241 LFYRTYMLFKNASGKRRFLLCLLLFTVITYFFVVIGIAPIFILYELDSPLCWNEVFIGYG 300 LFYRTYMLFKNASGKRRFLLCLLLFTVITYFFVVIGIAPIFILYELDSPLCWNEVFIGYG Sbjct: 241 LFYRTYMLFKNASGKRRFLLCLLLFTVITYFFVVIGIAPIFILYELDSPLCWNEVFIGYG 300 Query: 301 SALGSASFLTSFLGIWLFSYCMEDIHMAFIGIFTTMTGMAMTAFASTTLMMFLARVPFLF 360 SALGSASFLTSFLGIWLFSYCMEDIHMAFIGIFTTMTGMAMTAFASTTLMMFLARVPFLF Sbjct: 301 SALGSASFLTSFLGIWLFSYCMEDIHMAFIGIFTTMTGMAMTAFASTTLMMFLARVPFLF 360 Query: 361 TIVPFSVLRSMLSKVVRSTEQGTLFACIAFLETLGGVTAVSTFNGIYSATVAWYPGFTFL 420 TIVPFSVLRSMLSKVVRSTEQGTLFACIAFLETLGGVTAVSTFNGIYSATVAWYPGFTFL Sbjct: 361 TIVPFSVLRSMLSKVVRSTEQGTLFACIAFLETLGGVTAVSTFNGIYSATVAWYPGFTFL 420 Query: 421 LSAGLLLLPAISLCVVKCTSWNEGSYELLIQEESSEDASDRAC 463 LSAGLLLLPAISLCVVKCTSWNEGSYELLIQEESSEDASDRAC Sbjct: 421 LSAGLLLLPAISLCVVKCTSWNEGSYELLIQEESSEDASDRAC 463 >gi|32401447 solute carrier family 46, member 3 isoform a [Homo sapiens] Length = 461 Score = 921 bits (2381), Expect = 0.0 Identities = 461/461 (100%), Positives = 461/461 (100%) Query: 1 MKILFVEPAIFLSAFAMTLTGPLTTQYVYRRIWEETGNYTFSSDSNISECEKNKSSPIFA 60 MKILFVEPAIFLSAFAMTLTGPLTTQYVYRRIWEETGNYTFSSDSNISECEKNKSSPIFA Sbjct: 1 MKILFVEPAIFLSAFAMTLTGPLTTQYVYRRIWEETGNYTFSSDSNISECEKNKSSPIFA 60 Query: 61 FQEEVQKKVSRFNLQMDISGLIPGLVSTFILLSISDHYGRKFPMILSSVGALATSVWLCL 120 FQEEVQKKVSRFNLQMDISGLIPGLVSTFILLSISDHYGRKFPMILSSVGALATSVWLCL Sbjct: 61 FQEEVQKKVSRFNLQMDISGLIPGLVSTFILLSISDHYGRKFPMILSSVGALATSVWLCL 120 Query: 121 LCYFAFPFQLLIASTFIGAFCGNYTTFWGACFAYIVDQCKEHKQKTIRIAIIDFLLGLVT 180 LCYFAFPFQLLIASTFIGAFCGNYTTFWGACFAYIVDQCKEHKQKTIRIAIIDFLLGLVT Sbjct: 121 LCYFAFPFQLLIASTFIGAFCGNYTTFWGACFAYIVDQCKEHKQKTIRIAIIDFLLGLVT 180 Query: 181 GLTGLSSGYFIRELGFEWSFLIIAVSLAVNLIYILFFLGDPVKECSSQNVTMSCSEGFKN 240 GLTGLSSGYFIRELGFEWSFLIIAVSLAVNLIYILFFLGDPVKECSSQNVTMSCSEGFKN Sbjct: 181 GLTGLSSGYFIRELGFEWSFLIIAVSLAVNLIYILFFLGDPVKECSSQNVTMSCSEGFKN 240 Query: 241 LFYRTYMLFKNASGKRRFLLCLLLFTVITYFFVVIGIAPIFILYELDSPLCWNEVFIGYG 300 LFYRTYMLFKNASGKRRFLLCLLLFTVITYFFVVIGIAPIFILYELDSPLCWNEVFIGYG Sbjct: 241 LFYRTYMLFKNASGKRRFLLCLLLFTVITYFFVVIGIAPIFILYELDSPLCWNEVFIGYG 300 Query: 301 SALGSASFLTSFLGIWLFSYCMEDIHMAFIGIFTTMTGMAMTAFASTTLMMFLARVPFLF 360 SALGSASFLTSFLGIWLFSYCMEDIHMAFIGIFTTMTGMAMTAFASTTLMMFLARVPFLF Sbjct: 301 SALGSASFLTSFLGIWLFSYCMEDIHMAFIGIFTTMTGMAMTAFASTTLMMFLARVPFLF 360 Query: 361 TIVPFSVLRSMLSKVVRSTEQGTLFACIAFLETLGGVTAVSTFNGIYSATVAWYPGFTFL 420 TIVPFSVLRSMLSKVVRSTEQGTLFACIAFLETLGGVTAVSTFNGIYSATVAWYPGFTFL Sbjct: 361 TIVPFSVLRSMLSKVVRSTEQGTLFACIAFLETLGGVTAVSTFNGIYSATVAWYPGFTFL 420 Query: 421 LSAGLLLLPAISLCVVKCTSWNEGSYELLIQEESSEDASDR 461 LSAGLLLLPAISLCVVKCTSWNEGSYELLIQEESSEDASDR Sbjct: 421 LSAGLLLLPAISLCVVKCTSWNEGSYELLIQEESSEDASDR 461 >gi|31543204 proton-coupled folate transporter [Homo sapiens] Length = 459 Score = 223 bits (568), Expect = 3e-58 Identities = 146/431 (33%), Positives = 221/431 (51%), Gaps = 22/431 (5%) Query: 6 VEPAIFLSAFAMTLTGPLTTQYVYRRIWEETGNYTFSSDSNISECEKNKSSPIFAFQEEV 65 VEP +FL+ FA+ L GPLTTQY++ R + G ++ C + P +EV Sbjct: 25 VEPLVFLANFALVLQGPLTTQYLWHRFSADLG---YNGTRQRGGCSNRSADPTM---QEV 78 Query: 66 QKKVSRFNLQMDISGLIPGLVSTFILLSISDHYGRKFPMILSSVGALATSVWLCLLCYFA 125 + S + L M++ G + GL S+ +L + SD GR+ ++L+S+G L + L+ F Sbjct: 79 ETLTSHWTLYMNVGGFLVGLFSSTLLGAWSDSVGRRPLLVLASLGLLLQA----LVSVFV 134 Query: 126 FPFQLLIASTFIG----AFCGNYTTFWGACFAYIVDQCKEHKQKTIRIAIIDFLLGLVTG 181 QL + +G A G++ A FA + D + +T R+A+++ +G+ Sbjct: 135 VQLQLHVGYFVLGRILCALLGDFGGLLAASFASVAD-VSSSRSRTFRMALLEASIGVAGM 193 Query: 182 LTGLSSGYFIRELGFEWSFLIIAVSLAVNLIYILFFLGDPVKECSSQNV-TMSCSEGFKN 240 L L G+++R G+ F + L +Y F G+ +KE S + T Sbjct: 194 LASLLGGHWLRAQGYANPFWLALALLIAMTLYAAFCFGETLKEPKSTRLFTFRHHRSIVQ 253 Query: 241 LFYRTYMLFKNASGKRRFLLCLLLFTVITYFFVVIGIAPIFILYELDSPLCWNEVFIGYG 300 L+ S K L L +F VIT F G I LYEL +PLCW+ IGYG Sbjct: 254 LYVAPA---PEKSRKHLALYSLAIFVVITVHF---GAQDILTLYELSTPLCWDSKLIGYG 307 Query: 301 SALGSASFLTSFLGIWLFSYCMEDIHMAFIGIFTTMTGMAMTAFASTTLMMFLARVPFLF 360 SA +LTS L + L YC+ D +A IG+ + GM + AFA+ T +MF Sbjct: 308 SAAQHLPYLTSLLALKLLQYCLADAWVAEIGLAFNILGMVVFAFATITPLMFTGYGLLFL 367 Query: 361 TIVPFSVLRSMLSKVVRSTEQGTLFACIAFLETLGGVTAVSTFNGIYSATVAWYPGFTFL 420 ++V V+R+ LSK+VR TEQG LF+ +A + +L +TA FN +Y AT+ + GF FL Sbjct: 368 SLVITPVIRAKLSKLVRETEQGALFSAVACVNSLAMLTASGIFNSLYPATLNFMKGFPFL 427 Query: 421 LSAGLLLLPAI 431 L AGLLL+PA+ Sbjct: 428 LGAGLLLIPAV 438 >gi|223029454 solute carrier family 46, member 2 [Homo sapiens] Length = 475 Score = 160 bits (406), Expect = 2e-39 Identities = 112/401 (27%), Positives = 193/401 (48%), Gaps = 22/401 (5%) Query: 56 SPIFAFQEEVQKKVSRFNLQMDISGLIPGLVSTFILLSISDHYGRKFPMILSSVGALATS 115 SP A +++ Q+ +S F + ++ + L+S + L +SD Y RK + +S +G L + Sbjct: 61 SPRGALEDQQQRAISNFYIIYNLVVGLSPLLSAYGLGWLSDRYHRKISICMSLLGFLLSR 120 Query: 116 VWLCLLCYFAFPFQLLIASTFIGAFCGNYTTFWGACFAYIVDQCKEHKQKTIRIAIIDFL 175 + L L +P ++L + + G ++ FW A + ++++R+ +ID + Sbjct: 121 LGLLLKVLLDWPVEVLYGAAALNGLFGGFSAFWSGVMA-LGSLGSSEGRRSVRLILIDLM 179 Query: 176 LGLVTGLTGLSSGYFIRELGFEWSFLIIAVSLAVN-----LIYILFFLGDP--VKECSSQ 228 LGL ++SG+ +++ +I + +V+ L+Y L L P V + S + Sbjct: 180 LGLAGFCGSMASGHLFKQMAGHSGQGLILTACSVSCASFALLYSLLVLKVPESVAKPSQE 239 Query: 229 NVTMSCSEGFKNLFYRT---------YMLFKNAS-GK---RRFLLCLLLFTVITYFFVVI 275 + G YRT Y + S GK + + LL I Y V+ Sbjct: 240 LPAVDTVSGTVGT-YRTLDPDQLDQQYAVGHPPSPGKAKPHKTTIALLFVGAIIYDLAVV 298 Query: 276 GIAPIFILYELDSPLCWNEVFIGYGSALGSASFLTSFLGIWLFSYCMEDIHMAFIGIFTT 335 G + L+ L PL WN+V +GYG A G F+TSFLG+ +FS C D M IG+ + Sbjct: 299 GTVDVIPLFVLREPLGWNQVQVGYGMAAGYTIFITSFLGVLVFSRCFRDTTMIMIGMVSF 358 Query: 336 MTGMAMTAFASTTLMMFLARVPFLFTIVPFSVLRSMLSKVVRSTEQGTLFACIAFLETLG 395 +G + AF T M ++AR LF ++P + +RS +SK+++ + G +F + L Sbjct: 359 GSGALLLAFVKETYMFYIARAVMLFALIPVTTIRSAMSKLIKGSSYGKVFVILQLSLALT 418 Query: 396 GVTAVSTFNGIYSATVAWYPGFTFLLSAGLLLLPAISLCVV 436 GV + +N IY T+ + G F LS+ L L I + +V Sbjct: 419 GVVTSTLYNKIYQLTMDMFVGSCFALSSFLSFLAIIPISIV 459 >gi|94721311 hippocampus abundant transcript-like 1 [Homo sapiens] Length = 506 Score = 40.0 bits (92), Expect = 0.004 Identities = 76/327 (23%), Positives = 133/327 (40%), Gaps = 53/327 (16%) Query: 78 ISGLIPGLVSTFILLS------ISDHYGRKFPMILSSVGALATSVWLCLLCYFAFPFQLL 131 ++GLI G+ LS +SD +GRK P +L +V + FP L+ Sbjct: 81 MNGLIQGVKGLLSFLSAPLIGALSDVWGRK-PFLLGTV------------FFTCFPIPLM 127 Query: 132 IASTF----IGAFCGNYTTFWGACFAYIVDQCKEHKQKTIRIAI-IDFLLGLVTGLTGLS 186 S + + + G ++ + FAY+ D +EH++ T + F LV+ + Sbjct: 128 RISPWWYFAMISVSGVFSVTFSVIFAYVADVTQEHERSTAYGWVSATFAASLVS--SPAI 185 Query: 187 SGYFIRELGFEWSFLIIAVSLAVNLIYILFFLGDPVKECSSQNVTMSCSEGFKNLFYRTY 246 Y G L++ V+ V L+ I F L V S E + + + Sbjct: 186 GAYLSASYG---DSLVVLVATVVALLDICFIL---------VAVPESLPEKMRPVSWGAQ 233 Query: 247 MLFKNAS--------GKRRFLLCLLLFTVITYFFVVIGIAPIFILYELDSPLCWNEVFIG 298 + +K A GK +L L+ TV + G F LY L + + V I Sbjct: 234 ISWKQADPFASLKKVGKDSTVL-LICITVFLSYLPEAGQYSSFFLY-LRQVIGFGSVKIA 291 Query: 299 -YGSALGSASFL--TSFLGIWLFSYCMEDIHMAFIGIFTTMTGMAMTAFASTTLMMFLAR 355 + + +G S + T+FL I + S + + + +G+ M +A F S MM+ A Sbjct: 292 AFIAMVGILSIVAQTAFLSILMRS--LGNKNTVLLGLGFQMLQLAWYGFGSQAWMMWAAG 349 Query: 356 VPFLFTIVPFSVLRSMLSKVVRSTEQG 382 + + F + +++S+ S +QG Sbjct: 350 TVAAMSSITFPAISALVSRNAESDQQG 376 >gi|217416366 major facilitator superfamily domain containing 9 [Homo sapiens] Length = 474 Score = 35.0 bits (79), Expect = 0.14 Identities = 42/149 (28%), Positives = 60/149 (40%), Gaps = 12/149 (8%) Query: 252 ASGKRRFLLCLLLFTVITYFFVVIGIAPIFILYELD---SPLCWNEVFIGYGSALGSASF 308 A G RRFLLCL L + F V + + P+ L+ SP V YG F Sbjct: 39 AVGARRFLLCLYLVGFLDLFGVSM-VVPLLSLHVKSLGASPTVAGIVGSSYGIL---QLF 94 Query: 309 LTSFLGIWLFSYCMEDIHMAFIGIFTTMTGMAMTAFASTTLMMFLARVPFLFTIVPFSVL 368 ++ +G W S + I + G + A+ + LARVP S+ Sbjct: 95 SSTLVGCW--SDVVGRRSSLLACILLSALGYLLLGAATNVFLFVLARVPAGIFKHTLSIS 152 Query: 369 RSMLSKVVRSTEQGTLFACIAFLETLGGV 397 R++LS VV E+ + I T GV Sbjct: 153 RALLSDVVPEKERPLV---IGHFNTASGV 178 >gi|39753965 hippocampus abundant transcript 1 [Homo sapiens] Length = 490 Score = 35.0 bits (79), Expect = 0.14 Identities = 66/330 (20%), Positives = 125/330 (37%), Gaps = 35/330 (10%) Query: 78 ISGLIPGLVSTFILLS------ISDHYGRKFPMILS------SVGALATSVWLCLLCYFA 125 ++GLI G+ LS +SD +GRK ++L+ + + S W YFA Sbjct: 73 MNGLIQGVKGLLSFLSAPLIGALSDVWGRKSFLLLTVFFTCAPIPLMKISPWW----YFA 128 Query: 126 FPFQLLIASTFIGAFCGNYTTFWGACFAYIVDQCKEHKQK-TIRIAIIDFLLGLVTGLTG 184 + + G + + FAY+ D +EH++ + F LVT + Sbjct: 129 -----------VISVSGVFAVTFSVVFAYVADITQEHERSMAYGLVSATFAASLVT--SP 175 Query: 185 LSSGYFIRELGFEWSFLIIAVSLAVNLIYILFFLGDPVKECSSQNVTMSCSEGFKNLFYR 244 Y R G L++ ++ A+ L+ I F L V E + + S G + + Sbjct: 176 AIGAYLGRVYG---DSLVVVLATAIALLDICFIL-VAVPESLPEKM-RPASWGAPISWEQ 230 Query: 245 TYMLFKNASGKRRFLLCLLLFTVITYFFVVIGIAPIFILYELDSPLCWNEVFIGYGSALG 304 + ++ L+ TV + G F LY E + + LG Sbjct: 231 ADPFASLKKVGQDSIVLLICITVFLSYLPEAGQYSSFFLYLRQIMKFSPESVAAFIAVLG 290 Query: 305 SASFLTSFLGIWLFSYCMEDIHMAFIGIFTTMTGMAMTAFASTTLMMFLARVPFLFTIVP 364 S + + + L + + + +G+ + +A F S MM+ A + + Sbjct: 291 ILSIIAQTIVLSLLMRSIGNKNTILLGLGFQILQLAWYGFGSEPWMMWAAGAVAAMSSIT 350 Query: 365 FSVLRSMLSKVVRSTEQGTLFACIAFLETL 394 F + +++S+ + +QG + I + L Sbjct: 351 FPAVSALVSRTADADQQGVVQGMITGIRGL 380 >gi|47933389 solute carrier family 2, member 9 protein isoform 2 [Homo sapiens] Length = 511 Score = 33.1 bits (74), Expect = 0.55 Identities = 41/147 (27%), Positives = 60/147 (40%), Gaps = 16/147 (10%) Query: 82 IPGLVSTFILLSISDHYGRKFPMILSSVGALATSVWLCLLCYF-AFPFQLLIASTFIGAF 140 I GLV T I+ I GRK ++ ++ A S L + C A F++LI FI Sbjct: 90 IGGLVGTLIVKMIGKVLGRKHTLLANN--GFAISAALLMACSLQAGAFEMLIVGRFIMGI 147 Query: 141 CGNYTTFWGACFAYIVDQCKEHKQKTIR-----IAIIDFLLGLVTG-LTGLSSGYFIREL 194 G G + + E K IR + I +G+ TG L GL +E Sbjct: 148 DG------GVALSVLPMYLSEISPKEIRGSLGQVTAIFICIGVFTGQLLGLPE-LLGKES 200 Query: 195 GFEWSFLIIAVSLAVNLIYILFFLGDP 221 + + F +I V V L+ + F P Sbjct: 201 TWPYLFGVIVVPAVVQLLSLPFLPDSP 227 >gi|47933387 solute carrier family 2, member 9 protein isoform 1 [Homo sapiens] Length = 540 Score = 33.1 bits (74), Expect = 0.55 Identities = 41/147 (27%), Positives = 60/147 (40%), Gaps = 16/147 (10%) Query: 82 IPGLVSTFILLSISDHYGRKFPMILSSVGALATSVWLCLLCYF-AFPFQLLIASTFIGAF 140 I GLV T I+ I GRK ++ ++ A S L + C A F++LI FI Sbjct: 119 IGGLVGTLIVKMIGKVLGRKHTLLANN--GFAISAALLMACSLQAGAFEMLIVGRFIMGI 176 Query: 141 CGNYTTFWGACFAYIVDQCKEHKQKTIR-----IAIIDFLLGLVTG-LTGLSSGYFIREL 194 G G + + E K IR + I +G+ TG L GL +E Sbjct: 177 DG------GVALSVLPMYLSEISPKEIRGSLGQVTAIFICIGVFTGQLLGLPE-LLGKES 229 Query: 195 GFEWSFLIIAVSLAVNLIYILFFLGDP 221 + + F +I V V L+ + F P Sbjct: 230 TWPYLFGVIVVPAVVQLLSLPFLPDSP 256 >gi|22748751 solute carrier family 43, member 2 [Homo sapiens] Length = 569 Score = 32.7 bits (73), Expect = 0.71 Identities = 30/130 (23%), Positives = 52/130 (40%), Gaps = 12/130 (9%) Query: 340 AMTAFASTTLMMFLARVPFLFTIVPFSVLRSMLSKVVRS---TEQGTLFACIAFLETLGG 396 AM AFA T L++ V L +P +L +L +VR + G L+A + G Sbjct: 424 AMRAFAFTNLLLVGFGVTCLIPNLPLQILSFILHTIVRGFIHSAVGGLYAAVYPSTQFGS 483 Query: 397 VTAVSTF---------NGIYSATVAWYPGFTFLLSAGLLLLPAISLCVVKCTSWNEGSYE 447 +T + + ++ A + G ++ GLLLL + C+ E Sbjct: 484 LTGLQSLISALFALLQQPLFLAMMGPLQGDPLWVNVGLLLLSLLGFCLPLYLICYRRQLE 543 Query: 448 LLIQEESSED 457 +Q+ +D Sbjct: 544 RQLQQRQEDD 553 >gi|4557803 Niemann-Pick disease, type C1 precursor [Homo sapiens] Length = 1278 Score = 32.0 bits (71), Expect = 1.2 Identities = 47/199 (23%), Positives = 79/199 (39%), Gaps = 32/199 (16%) Query: 203 IAVSLAVNLIYILFFLGDPVKECSSQNVTMSCSEGFKNLFYRTYMLFKNASGKRRFL--- 259 + +S A+ +YI LG +K C V S G + +L A F Sbjct: 624 VVISYAIMFLYISLALGH-IKSCRRLLVDSKVSLGIAGILI---VLSSVACSLGVFSYIG 679 Query: 260 --LCLLLFTVITYFFVVIGIAPIFIL---YELDSPLCWNEVFIGYGSALGSAS---FLTS 311 L L++ VI + + +G+ IFIL Y+ D L + G LG + FL+S Sbjct: 680 LPLTLIVIEVIPFLVLAVGVDNIFILVQAYQRDERLQGETLDQQLGRVLGEVAPSMFLSS 739 Query: 312 FLGIWLFSYCMEDIHMAFIGIFTTMTGM-AMTAFASTTLMM-FLARVPFLFTIVPFSVLR 369 F F F+G + M + + FA + + FL ++ +++ + R Sbjct: 740 FSETVAF----------FLGALSVMPAVHTFSLFAGLAVFIDFLLQITCFVSLLGLDIKR 789 Query: 370 SMLSKV-----VRSTEQGT 383 +++ VR E GT Sbjct: 790 QEKNRLDIFCCVRGAEDGT 808 >gi|45504369 solute carrier family 24, member 5 [Homo sapiens] Length = 500 Score = 31.6 bits (70), Expect = 1.6 Identities = 36/168 (21%), Positives = 66/168 (39%), Gaps = 26/168 (15%) Query: 262 LLLFTVITYFFVVIGIAPIFILYELDSPLCWNEVFIGYGSALGSASFLTSFLGIWLFSYC 321 ++ F +I Y F+ I I + Y L S +E +G + +F+ + Sbjct: 70 IIYFLIIVYMFMAISI--VCDEYFLPSLEIISES-LGLSQDVAGTTFMAA-------GSS 119 Query: 322 MEDIHMAFIGIFTTMTGMAMTAFASTTLMMFLARVPFLFTIVPFSVLRSMLSKVVRSTEQ 381 ++ AF+G+F T + ++ + + + ++ +LS V + Sbjct: 120 APELVTAFLGVFITKGDIGISTILGSAI----------YNLLGICAACGLLSNTVSTLSC 169 Query: 382 GTLFA-CIAFLETLGGVTAVSTFNGIYSATVAWYPGFTFLLSAGLLLL 428 LF C A+ ++A + IY V WY G LL GL +L Sbjct: 170 WPLFRDCAAYT-----ISAAAVLGIIYDNQVYWYEGALLLLIYGLYVL 212 >gi|45269141 multimerin 1 [Homo sapiens] Length = 1228 Score = 30.8 bits (68), Expect = 2.7 Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 3/66 (4%) Query: 286 LDSPLCWNEVFIGYGSALG--SASFLTSFLGIWLFSYCMEDIHMAFIGIFTTMTGMAMTA 343 + P+ +N + + YG++ + F +LG+++F Y +E A I F + G+ A Sbjct: 1113 IPGPILFNNLDVNYGASYTPRTGKFRIPYLGVYVFKYTIESF-SAHISGFLVVDGIDKLA 1171 Query: 344 FASTTL 349 F S + Sbjct: 1172 FESENI 1177 >gi|24497490 solute carrier family 22 member 4 [Homo sapiens] Length = 551 Score = 30.4 bits (67), Expect = 3.5 Identities = 35/150 (23%), Positives = 67/150 (44%), Gaps = 9/150 (6%) Query: 186 SSGYFIRELGFEWSFLIIAVSLAVNLIYILFFLGDPVKECSSQNVTMSCSEGFKNLFYRT 245 S ++ + EW+ L+ + V L LFF+G V S + +S G KN+ + T Sbjct: 120 SQDVYLSTVVTEWN-LVCEDNWKVPLTTSLFFVG--VLLGSFVSGQLSDRFGRKNVLFAT 176 Query: 246 YMLFKNASGKRRFLLCLLLFTVITYFFVVIGIAPI---FILYELDSPLCWNEVFIGYGSA 302 + S + F + +FTV+ FV++G+ I + + L + + V I + + Sbjct: 177 MAVQTGFSFLQIFSISWEMFTVL---FVIVGMGQISNYVVAFILGTEILGKSVRIIFSTL 233 Query: 303 LGSASFLTSFLGIWLFSYCMEDIHMAFIGI 332 F ++ + LF+Y + D M + + Sbjct: 234 GVCTFFAVGYMLLPLFAYFIRDWRMLLLAL 263 >gi|68223315 CD47 antigen isoform 3 precursor [Homo sapiens] Length = 312 Score = 30.0 bits (66), Expect = 4.6 Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 6/86 (6%) Query: 197 EWSFLIIAVSLAVNLIYILFFLGDPVKECSSQNVT----MSCSEGFKNLFYRTYMLFKNA 252 E + ++ L + +I I+ + E S +N T + S G L + Y +F A Sbjct: 174 EKTIALLVAGLVITVIVIVGAILFVPGEYSLKNATGLGLIVTSTGILILLH--YYVFSTA 231 Query: 253 SGKRRFLLCLLLFTVITYFFVVIGIA 278 G F++ +L+ VI Y V+G++ Sbjct: 232 IGLTSFVIAILVIQVIAYILAVVGLS 257 >gi|38683836 CD47 antigen isoform 2 precursor [Homo sapiens] Length = 305 Score = 30.0 bits (66), Expect = 4.6 Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 6/86 (6%) Query: 197 EWSFLIIAVSLAVNLIYILFFLGDPVKECSSQNVT----MSCSEGFKNLFYRTYMLFKNA 252 E + ++ L + +I I+ + E S +N T + S G L + Y +F A Sbjct: 174 EKTIALLVAGLVITVIVIVGAILFVPGEYSLKNATGLGLIVTSTGILILLH--YYVFSTA 231 Query: 253 SGKRRFLLCLLLFTVITYFFVVIGIA 278 G F++ +L+ VI Y V+G++ Sbjct: 232 IGLTSFVIAILVIQVIAYILAVVGLS 257 >gi|4502673 CD47 antigen isoform 1 precursor [Homo sapiens] Length = 323 Score = 30.0 bits (66), Expect = 4.6 Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 6/86 (6%) Query: 197 EWSFLIIAVSLAVNLIYILFFLGDPVKECSSQNVT----MSCSEGFKNLFYRTYMLFKNA 252 E + ++ L + +I I+ + E S +N T + S G L + Y +F A Sbjct: 174 EKTIALLVAGLVITVIVIVGAILFVPGEYSLKNATGLGLIVTSTGILILLH--YYVFSTA 231 Query: 253 SGKRRFLLCLLLFTVITYFFVVIGIA 278 G F++ +L+ VI Y V+G++ Sbjct: 232 IGLTSFVIAILVIQVIAYILAVVGLS 257 >gi|4507011 glucose transporter 4 [Homo sapiens] Length = 509 Score = 29.6 bits (65), Expect = 6.0 Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 2/62 (3%) Query: 82 IPGLVSTFILLSISDHYGRKFPMILSSVGALATSVWLCLLCYFAFPFQLLIASTF-IGAF 140 + G++S+F++ IS GRK M++++V A+ L L A +++LI F IGA+ Sbjct: 90 VGGMISSFLIGIISQWLGRKRAMLVNNVLAVLGGS-LMGLANAAASYEMLILGRFLIGAY 148 Query: 141 CG 142 G Sbjct: 149 SG 150 >gi|239748531 PREDICTED: similar to hCG1820960 [Homo sapiens] Length = 86 Score = 29.6 bits (65), Expect = 6.0 Identities = 12/24 (50%), Positives = 18/24 (75%) Query: 273 VVIGIAPIFILYELDSPLCWNEVF 296 +V G AP+FIL+E D PL ++E + Sbjct: 1 MVCGYAPLFILFEKDPPLMFSEEY 24 >gi|52317194 olfactory receptor, family 2, subfamily D, member 3 [Homo sapiens] Length = 330 Score = 29.6 bits (65), Expect = 6.0 Identities = 33/159 (20%), Positives = 59/159 (37%), Gaps = 5/159 (3%) Query: 235 SEGFKNLFYRTYMLFKNASGKRRFLLCLLLFTVITYFFVVIGIAPIFILYELDSPLCWNE 294 S G +N + + +F S + + L + +I Y V+G I IL LDS L Sbjct: 16 SMGEENQTFVSKFIFLGLSQDLQTQILLFILFLIIYLLTVLGNQLIIILIFLDSRLHTPM 75 Query: 295 VFIGYGSALGSASFLTSFLGIWLFSYCMEDIHMAFIGIFTTMTGMAMTAFASTTLMMFLA 354 F + F TS + L + ++ ++F G T + + L+ ++ Sbjct: 76 YFFLRNLSFADLCFSTSIVPQVLVHFLVKRKTISFYGCMTQIIVFLLVGCTECALLAVMS 135 Query: 355 RVPFLFTIVPFSVLRSMLSKV-----VRSTEQGTLFACI 388 ++ P M +V RS G L + + Sbjct: 136 YDRYVAVCKPLYYSTIMTQRVCLWLSFRSWASGALVSLV 174 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.329 0.141 0.437 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 15,429,454 Number of Sequences: 37866 Number of extensions: 612432 Number of successful extensions: 1712 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 14 Number of HSP's that attempted gapping in prelim test: 1698 Number of HSP's gapped (non-prelim): 24 length of query: 463 length of database: 18,247,518 effective HSP length: 106 effective length of query: 357 effective length of database: 14,233,722 effective search space: 5081438754 effective search space used: 5081438754 T: 11 A: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.8 bits) S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.