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Search of human proteins with 20357547
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|20357547 ATPase, H+ transporting, lysosomal 14kD, V1 subunit
F [Homo sapiens]
(119 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|20357547 ATPase, H+ transporting, lysosomal 14kD, V1 subunit ... 238 1e-63
gi|150417981 glucocorticoid receptor DNA binding factor 1 [Homo ... 28 1.6
gi|29789405 hypothetical protein LOC284565 [Homo sapiens] 27 3.6
gi|34452732 phosphatidylinositol-3,4,5-trisphosphate-dependent R... 26 6.1
gi|190358504 SHC SH2-domain binding protein 1 [Homo sapiens] 26 6.1
gi|148922937 guanine nucleotide binding protein (G protein), gam... 26 6.1
gi|148922892 guanine nucleotide binding protein (G protein), gam... 26 6.1
gi|4758450 guanine nucleotide binding protein (G protein), gamma... 26 6.1
gi|224589132 hypothetical protein LOC100132406 [Homo sapiens] 26 7.9
gi|239741309 PREDICTED: hypothetical protein XP_002344485 [Homo ... 26 7.9
gi|169162915 PREDICTED: hypothetical protein LOC728841 [Homo sap... 26 7.9
gi|62243658 PI-3-kinase-related kinase SMG-1 [Homo sapiens] 26 7.9
>gi|20357547 ATPase, H+ transporting, lysosomal 14kD, V1 subunit F
[Homo sapiens]
Length = 119
Score = 238 bits (606), Expect = 1e-63
Identities = 119/119 (100%), Positives = 119/119 (100%)
Query: 1 MAGRGKLIAVIGDEDTVTGFLLGGIGELNKNRHPNFLVVEKDTTINEIEDTFRQFLNRDD 60
MAGRGKLIAVIGDEDTVTGFLLGGIGELNKNRHPNFLVVEKDTTINEIEDTFRQFLNRDD
Sbjct: 1 MAGRGKLIAVIGDEDTVTGFLLGGIGELNKNRHPNFLVVEKDTTINEIEDTFRQFLNRDD 60
Query: 61 IGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPYDAAKDSILRRARGMFTAEDLR 119
IGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPYDAAKDSILRRARGMFTAEDLR
Sbjct: 61 IGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPYDAAKDSILRRARGMFTAEDLR 119
>gi|150417981 glucocorticoid receptor DNA binding factor 1 [Homo
sapiens]
Length = 1499
Score = 28.1 bits (61), Expect = 1.6
Identities = 14/60 (23%), Positives = 28/60 (46%)
Query: 35 NFLVVEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSK 94
N + EKD T+N + + F + ++ N I + H ++ +Q + A+ E+ K
Sbjct: 1304 NLDLAEKDFTVNTVAGAMKSFFSELPDPLVPYNMQIDLVEAHKINDREQKLHALKEVLKK 1363
>gi|29789405 hypothetical protein LOC284565 [Homo sapiens]
Length = 670
Score = 26.9 bits (58), Expect = 3.6
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 39 VEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPY 98
+EK + E +D L+R+ L+++ E+++ +LD + LE+P PY
Sbjct: 406 IEKYQEVEEDQDPSCPRLSRE-----LLDEKEPEVLQDSLDRCYSTPSDYLELPDLGQPY 460
Query: 99 DAAKDSILRRARGMFTAED 117
+A S+ + G+ A D
Sbjct: 461 SSAVYSLEEQYLGLALAVD 479
>gi|34452732 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac
exchange factor 1 [Homo sapiens]
Length = 1659
Score = 26.2 bits (56), Expect = 6.1
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 12 GDEDTVTGFLLGGIGELNKNRHPNFLVVEKDTTINEIEDTFRQFLNRDDIGIILINQYIA 71
G D G G +G+ ++R +FL+ ++D EI+D + Q + D+ + + QY+
Sbjct: 1044 GLHDGSFGPASGTLGQ--EDRGLSFLLKQED---REIQDAYLQLFTKLDVALKEMKQYVT 1098
Query: 72 EMVR 75
++ R
Sbjct: 1099 QINR 1102
>gi|190358504 SHC SH2-domain binding protein 1 [Homo sapiens]
Length = 672
Score = 26.2 bits (56), Expect = 6.1
Identities = 9/31 (29%), Positives = 23/31 (74%)
Query: 27 ELNKNRHPNFLVVEKDTTINEIEDTFRQFLN 57
++ ++R P+ L+V+ +++ E+++R+FLN
Sbjct: 233 DILEDRVPSGLIVDYHNLLSQCEESYRKFLN 263
>gi|148922937 guanine nucleotide binding protein (G protein), gamma
4 [Homo sapiens]
Length = 75
Score = 26.2 bits (56), Expect = 6.1
Identities = 12/60 (20%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 43 TTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPYDAAK 102
T+I++ Q + + ++Q A+++ + +AH + P ++ +P+ E+P+ K
Sbjct: 11 TSISQARKAVEQLKMEACMDRVKVSQAAADLLAYC-EAHVREDPLIIPVPASENPFREKK 69
>gi|148922892 guanine nucleotide binding protein (G protein), gamma
4 [Homo sapiens]
Length = 75
Score = 26.2 bits (56), Expect = 6.1
Identities = 12/60 (20%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 43 TTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPYDAAK 102
T+I++ Q + + ++Q A+++ + +AH + P ++ +P+ E+P+ K
Sbjct: 11 TSISQARKAVEQLKMEACMDRVKVSQAAADLLAYC-EAHVREDPLIIPVPASENPFREKK 69
>gi|4758450 guanine nucleotide binding protein (G protein), gamma 4
[Homo sapiens]
Length = 75
Score = 26.2 bits (56), Expect = 6.1
Identities = 12/60 (20%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 43 TTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPYDAAK 102
T+I++ Q + + ++Q A+++ + +AH + P ++ +P+ E+P+ K
Sbjct: 11 TSISQARKAVEQLKMEACMDRVKVSQAAADLLAYC-EAHVREDPLIIPVPASENPFREKK 69
>gi|224589132 hypothetical protein LOC100132406 [Homo sapiens]
Length = 3628
Score = 25.8 bits (55), Expect = 7.9
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 39 VEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPY 98
+EK + E +D L+R+ L+++ E+++ +LD + LE+P PY
Sbjct: 677 IEKYQEVEEDQDPSCPRLSRE-----LLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPY 731
Query: 99 DAAKDSILRRARGM 112
+A S+ + G+
Sbjct: 732 SSAVYSLEEQYLGL 745
Score = 25.8 bits (55), Expect = 7.9
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 39 VEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPY 98
+EK + E +D L+R+ L+++ E+++ +LD + LE+P PY
Sbjct: 921 IEKYQEVEEDQDPSCPRLSRE-----LLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPY 975
Query: 99 DAAKDSILRRARGM 112
+A S+ + G+
Sbjct: 976 SSAVYSLEEQYLGL 989
Score = 25.8 bits (55), Expect = 7.9
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 39 VEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPY 98
+EK + E +D L+R+ L+++ E+++ +LD + LE+P PY
Sbjct: 1165 IEKYQEVEEDQDPSCPRLSRE-----LLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPY 1219
Query: 99 DAAKDSILRRARGM 112
+A S+ + G+
Sbjct: 1220 SSAVYSLEEQYLGL 1233
Score = 25.8 bits (55), Expect = 7.9
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 39 VEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPY 98
+EK + E +D L+R+ L+++ E+++ +LD + LE+P PY
Sbjct: 1655 IEKYQEVEEDQDPSCPRLSRE-----LLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPY 1709
Query: 99 DAAKDSILRRARGM 112
+A S+ + G+
Sbjct: 1710 SSAVYSLEEQYLGL 1723
Score = 25.8 bits (55), Expect = 7.9
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 39 VEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPY 98
+EK + E +D L+R+ L+++ E+++ +LD + LE+P PY
Sbjct: 1899 IEKYQEVEEDQDPSCPRLSRE-----LLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPY 1953
Query: 99 DAAKDSILRRARGM 112
+A S+ + G+
Sbjct: 1954 SSAVYSLEEQYLGL 1967
Score = 25.8 bits (55), Expect = 7.9
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 39 VEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPY 98
+EK + E +D L+R+ L+++ E+++ +LD + LE+P PY
Sbjct: 2143 IEKYQEVEEDQDPSCPRLSRE-----LLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPY 2197
Query: 99 DAAKDSILRRARGM 112
+A S+ + G+
Sbjct: 2198 SSAVYSLEEQYLGL 2211
Score = 25.8 bits (55), Expect = 7.9
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 39 VEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPY 98
+EK + E +D L+R+ L+++ E+++ +LD + LE+P PY
Sbjct: 2387 IEKYQEVEEDQDPSCPRLSRE-----LLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPY 2441
Query: 99 DAAKDSILRRARGM 112
+A S+ + G+
Sbjct: 2442 SSAVYSLEEQYLGL 2455
Score = 25.8 bits (55), Expect = 7.9
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 39 VEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPY 98
+EK + E +D L+R+ L+++ E+++ +LD + LE+P PY
Sbjct: 2631 IEKYQEVEEDQDPSCPRLSRE-----LLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPY 2685
Query: 99 DAAKDSILRRARGM 112
+A S+ + G+
Sbjct: 2686 SSAVYSLEEQYLGL 2699
Score = 25.8 bits (55), Expect = 7.9
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 39 VEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPY 98
+EK + E +D L+R+ L+++ E+++ +LD + LE+P PY
Sbjct: 2875 IEKYQEVEEDQDPSCPRLSRE-----LLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPY 2929
Query: 99 DAAKDSILRRARGM 112
+A S+ + G+
Sbjct: 2930 SSAVYSLEEQYLGL 2943
Score = 25.8 bits (55), Expect = 7.9
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 39 VEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPY 98
+EK + E +D L+R+ L+++ E+++ +LD + LE+P PY
Sbjct: 3194 IEKYQEVEEDQDPSCPRLSRE-----LLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPY 3248
Query: 99 DAAKDSILRRARGM 112
+A S+ + G+
Sbjct: 3249 SSAVYSLEEQYLGL 3262
Score = 25.8 bits (55), Expect = 7.9
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 39 VEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPY 98
+EK + E +D L+R+ L+++ E+++ +LD + LE+P PY
Sbjct: 3438 IEKYQEVEEDQDPSCPRLSRE-----LLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPY 3492
Query: 99 DAAKDSILRRARGM 112
+A S+ + G+
Sbjct: 3493 SSAVYSLEEQYLGL 3506
>gi|239741309 PREDICTED: hypothetical protein XP_002344485 [Homo
sapiens]
Length = 4621
Score = 25.8 bits (55), Expect = 7.9
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 39 VEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPY 98
+EK + E +D L+R+ L+++ E+++ +LD + LE+P PY
Sbjct: 677 IEKYQEVEEDQDPSCPRLSRE-----LLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPY 731
Query: 99 DAAKDSILRRARGM 112
+A S+ + G+
Sbjct: 732 SSAVYSLEEQYLGL 745
Score = 25.8 bits (55), Expect = 7.9
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 39 VEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPY 98
+EK + E +D L+R+ L+++ E+++ +LD + LE+P PY
Sbjct: 921 IEKYQEVEEDQDPSCPRLSRE-----LLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPY 975
Query: 99 DAAKDSILRRARGM 112
+A S+ + G+
Sbjct: 976 SSAVYSLEEQYLGL 989
Score = 25.8 bits (55), Expect = 7.9
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 39 VEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPY 98
+EK + E +D L+R+ L+++ E+++ +LD + LE+P PY
Sbjct: 1165 IEKYQEVEEDQDPSCPRLSRE-----LLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPY 1219
Query: 99 DAAKDSILRRARGM 112
+A S+ + G+
Sbjct: 1220 SSAVYSLEEQYLGL 1233
Score = 25.8 bits (55), Expect = 7.9
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 39 VEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPY 98
+EK + E +D L+R+ L+++ E+++ +LD + LE+P PY
Sbjct: 1409 IEKYQEVEEDQDPSCPRLSRE-----LLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPY 1463
Query: 99 DAAKDSILRRARGM 112
+A S+ + G+
Sbjct: 1464 SSAVYSLEEQYLGL 1477
Score = 25.8 bits (55), Expect = 7.9
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 39 VEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPY 98
+EK + E +D L+R+ L+++ E+++ +LD + LE+P PY
Sbjct: 1653 IEKYQEVEEDQDPSCPRLSRE-----LLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPY 1707
Query: 99 DAAKDSILRRARGM 112
+A S+ + G+
Sbjct: 1708 SSAVYSLEEQYLGL 1721
Score = 25.8 bits (55), Expect = 7.9
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 39 VEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPY 98
+EK + E +D L+R+ L+++ E+++ +LD + LE+P PY
Sbjct: 1897 IEKYQEVEEDQDPSCPRLSRE-----LLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPY 1951
Query: 99 DAAKDSILRRARGM 112
+A S+ + G+
Sbjct: 1952 SSAVYSLEEQYLGL 1965
Score = 25.8 bits (55), Expect = 7.9
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 39 VEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPY 98
+EK + E +D L+R+ L+++ E+++ +LD + LE+P PY
Sbjct: 2141 IEKYQEVEEDQDPSCPRLSRE-----LLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPY 2195
Query: 99 DAAKDSILRRARGM 112
+A S+ + G+
Sbjct: 2196 SSAVYSLEEQYLGL 2209
Score = 25.8 bits (55), Expect = 7.9
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 39 VEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPY 98
+EK + E +D L+R+ L+++ E+++ +LD + LE+P PY
Sbjct: 2385 IEKYQEVEEDQDPSCPRLSRE-----LLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPY 2439
Query: 99 DAAKDSILRRARGM 112
+A S+ + G+
Sbjct: 2440 SSAVYSLEEQYLGL 2453
Score = 25.8 bits (55), Expect = 7.9
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 39 VEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPY 98
+EK + E +D L+R+ L+++ E+++ +LD + LE+P PY
Sbjct: 2629 IEKYQEVEEDQDPSCPRLSRE-----LLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPY 2683
Query: 99 DAAKDSILRRARGM 112
+A S+ + G+
Sbjct: 2684 SSAVYSLEEQYLGL 2697
Score = 25.8 bits (55), Expect = 7.9
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 39 VEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPY 98
+EK + E +D L+R+ L+++ E+++ +LD + LE+P PY
Sbjct: 3380 IEKYQEVEEDQDPSCPRLSRE-----LLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPY 3434
Query: 99 DAAKDSILRRARGM 112
+A S+ + G+
Sbjct: 3435 SSAVYSLEEQYLGL 3448
Score = 25.8 bits (55), Expect = 7.9
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 39 VEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPY 98
+EK + E +D L+R+ L+++ E+++ +LD + LE+P PY
Sbjct: 3624 IEKYQEVEEDQDPSCPRLSRE-----LLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPY 3678
Query: 99 DAAKDSILRRARGM 112
+A S+ + G+
Sbjct: 3679 SSAVYSLEEQYLGL 3692
Score = 25.8 bits (55), Expect = 7.9
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 39 VEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPY 98
+EK + E +D L+R+ L+++ E+++ +LD + LE+P PY
Sbjct: 3868 IEKYQEVEEDQDPSCPRLSRE-----LLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPY 3922
Query: 99 DAAKDSILRRARGM 112
+A S+ + G+
Sbjct: 3923 SSAVYSLEEQYLGL 3936
Score = 25.8 bits (55), Expect = 7.9
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 39 VEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPY 98
+EK + E +D L+R+ L+++ E+++ +LD + LE+P PY
Sbjct: 4112 IEKYQEVEEDQDPSCPRLSRE-----LLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPY 4166
Query: 99 DAAKDSILRRARGM 112
+A S+ + G+
Sbjct: 4167 SSAVYSLEEQYLGL 4180
Score = 25.8 bits (55), Expect = 7.9
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 39 VEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPY 98
+EK + E +D L+R+ L+++ E+++ +LD + LE+P PY
Sbjct: 4356 IEKYQEVEEDQDPSCPRLSRE-----LLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPY 4410
Query: 99 DAAKDSILRRARGM 112
+A S+ + G+
Sbjct: 4411 SSAVYSLEEQYLGL 4424
>gi|169162915 PREDICTED: hypothetical protein LOC728841 [Homo
sapiens]
Length = 3815
Score = 25.8 bits (55), Expect = 7.9
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 39 VEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPY 98
+EK + E +D L+R+ L+++ E+++ +LD + LE+P PY
Sbjct: 426 IEKYQEVEEDQDPSCPRLSRE-----LLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPY 480
Query: 99 DAAKDSILRRARGM 112
+A S+ + G+
Sbjct: 481 SSAVYSLEEQYLGL 494
Score = 25.8 bits (55), Expect = 7.9
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 39 VEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPY 98
+EK + E +D L+R+ L+++ E+++ +LD + LE+P PY
Sbjct: 670 IEKYQEVEEDQDPSCPRLSRE-----LLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPY 724
Query: 99 DAAKDSILRRARGM 112
+A S+ + G+
Sbjct: 725 SSAVYSLEEQYLGL 738
Score = 25.8 bits (55), Expect = 7.9
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 39 VEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPY 98
+EK + E +D L+R+ L+++ E+++ +LD + LE+P PY
Sbjct: 914 IEKYQEVEEDQDPSCPRLSRE-----LLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPY 968
Query: 99 DAAKDSILRRARGM 112
+A S+ + G+
Sbjct: 969 SSAVYSLEEQYLGL 982
Score = 25.8 bits (55), Expect = 7.9
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 39 VEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPY 98
+EK + E +D L+R+ L+++ E+++ +LD + LE+P PY
Sbjct: 1665 IEKYQEVEEDQDPSCPRLSRE-----LLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPY 1719
Query: 99 DAAKDSILRRARGM 112
+A S+ + G+
Sbjct: 1720 SSAVYSLEEQYLGL 1733
Score = 25.8 bits (55), Expect = 7.9
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 39 VEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPY 98
+EK + E +D L+R+ L+++ E+++ +LD + LE+P PY
Sbjct: 1909 IEKYQEVEEDQDPSCPRLSRE-----LLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPY 1963
Query: 99 DAAKDSILRRARGM 112
+A S+ + G+
Sbjct: 1964 SSAVYSLEEQYLGL 1977
Score = 25.8 bits (55), Expect = 7.9
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 39 VEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPY 98
+EK + E +D L+R+ L+++ E+++ +LD + LE+P PY
Sbjct: 2153 IEKYQEVEEDQDPSCPRLSRE-----LLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPY 2207
Query: 99 DAAKDSILRRARGM 112
+A S+ + G+
Sbjct: 2208 SSAVYSLEEQYLGL 2221
Score = 25.8 bits (55), Expect = 7.9
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 39 VEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPY 98
+EK + E +D L+R+ L+++ E+++ +LD + LE+P PY
Sbjct: 2397 IEKYQEVEEDQDPSCPRLSRE-----LLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPY 2451
Query: 99 DAAKDSILRRARGM 112
+A S+ + G+
Sbjct: 2452 SSAVYSLEEQYLGL 2465
Score = 25.8 bits (55), Expect = 7.9
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 39 VEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPY 98
+EK + E +D L+R+ L+++ E+++ +LD + LE+P PY
Sbjct: 2810 IEKYQEVEEDQDPSCPRLSRE-----LLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPY 2864
Query: 99 DAAKDSILRRARGM 112
+A S+ + G+
Sbjct: 2865 SSAVYSLEEQYLGL 2878
Score = 25.8 bits (55), Expect = 7.9
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 39 VEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPY 98
+EK + E +D L+R+ L+++ E+++ +LD + LE+P PY
Sbjct: 3561 IEKYQEVEEDQDPSCPRLSRE-----LLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPY 3615
Query: 99 DAAKDSILRRARGM 112
+A S+ + G+
Sbjct: 3616 SSAVYSLEEQYLGL 3629
>gi|62243658 PI-3-kinase-related kinase SMG-1 [Homo sapiens]
Length = 3661
Score = 25.8 bits (55), Expect = 7.9
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 43 TTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALD 79
T++ E+ FRQ + + + ++ +Y E + H LD
Sbjct: 2852 TSLQELNSNFRQIIFPEALRCLMKGEYTLESMLHELD 2888
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.140 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,984,263
Number of Sequences: 37866
Number of extensions: 143386
Number of successful extensions: 427
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 380
Number of HSP's gapped (non-prelim): 55
length of query: 119
length of database: 18,247,518
effective HSP length: 88
effective length of query: 31
effective length of database: 14,915,310
effective search space: 462374610
effective search space used: 462374610
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.