Guide to the Human Genome
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Name: GAMT Sequence: fasta or formatted (269aa) NCBI GI: 20336212
Description:

guanidinoacetate N-methyltransferase isoform b

Referenced in:

Amino Acid Biosynthesis and Selected Derivatives

Other entries for this name:
alt prot [236aa] guanidinoacetate N-methyltransferase isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.8         29           4
 C cysteine            1.5          4           1
 D aspartate           4.1         11           1
 E glutamate           6.3         17           2
 F phenylalanine       3.3          9           1
 G glycine            10.0         27           2
 H histidine           3.7         10           1
 I isoleucine          4.8         13           2
 K lysine              3.7         10           1
 L leucine             8.9         24           2
 M methionine          2.2          6           1
 N asparagine          2.2          6           1
 P proline             8.6         23           2
 Q glutamine           2.6          7           1
 R arginine            3.3          9           1
 S serine              4.8         13           2
 T threonine           5.6         15           1
 V valine              6.3         17           1
 W tryptophan          4.5         12           1
 Y tyrosine            2.6          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   guanidinoacetate N-methyltransferase isoform b [Homo... 
GAMT                  0.690   guanidinoacetate N-methyltransferase isoform a 
YIF1B                 0.016   Yip1 interacting factor homolog B isoform 7 
LOC100292050          0.011   PREDICTED: hypothetical protein XP_002344942 
LOC100290814          0.011   PREDICTED: hypothetical protein XP_002347710 
LOC100287593          0.011   PREDICTED: hypothetical protein XP_002344133 
PKP2                  0.011   plakophilin 2 isoform 2b 
RGS7                  0.009   regulator of G-protein signaling 7 
SMC2                  0.009   structural maintenance of chromosomes 2 
SMC2                  0.009   structural maintenance of chromosomes 2 
SMC2                  0.009   structural maintenance of chromosomes 2 
LOC730456             0.007   PREDICTED: hypothetical protein 
LOC100292796          0.007   PREDICTED: hypothetical protein 
LOC730456             0.007   PREDICTED: hypothetical protein 
LOC100287763          0.007   PREDICTED: hypothetical protein 
LOC100287763          0.007   PREDICTED: hypothetical protein XP_002342429 
FBLIM1                0.005   filamin-binding LIM protein-1 isoform b 
LOC100128895          0.005   PREDICTED: hypothetical protein 
LOC100128895          0.005   PREDICTED: hypothetical protein 
LOC100128895          0.005   PREDICTED: hypothetical protein 
ZNF429                0.005   zinc finger protein 429 
ZNF831                0.005   zinc finger protein 831 
NSMCE4A               0.005   non-SMC element 4 homolog A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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