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Search of human proteins with 20143935
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|20143935 relaxin 2 isoform 2 [Homo sapiens]
(117 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|20143935 relaxin 2 isoform 2 [Homo sapiens] 240 2e-64
gi|20143933 relaxin 2 isoform 1 preproprotein [Homo sapiens] 145 7e-36
gi|5902052 relaxin 1 preproprotein [Homo sapiens] 129 6e-31
gi|38569396 insulin-like 6 precursor [Homo sapiens] 44 3e-05
gi|38569233 insulin-like 5 precursor [Homo sapiens] 36 0.006
gi|18254464 relaxin 3 preproprotein [Homo sapiens] 35 0.017
gi|239753559 PREDICTED: hypothetical protein XP_002345696 [Homo ... 33 0.037
gi|239748103 PREDICTED: hypothetical protein [Homo sapiens] 33 0.037
gi|239741999 PREDICTED: hypothetical protein XP_002342370 [Homo ... 33 0.037
gi|38327535 insulin-like 3 precursor [Homo sapiens] 30 0.53
gi|4557669 interleukin 4 receptor alpha chain isoform a precurso... 28 1.2
gi|14210524 BCL2-related ovarian killer [Homo sapiens] 28 2.0
gi|22902136 osterix [Homo sapiens] 27 4.5
gi|239755922 PREDICTED: similar to Uncharacterized protein FLJ42... 27 4.5
gi|239750440 PREDICTED: hypothetical protein XP_002347362 [Homo ... 27 4.5
gi|239744742 PREDICTED: hypothetical protein XP_002343249 [Homo ... 27 4.5
gi|147904264 asparagine-linked glycosylation 10 homolog (yeast, ... 27 4.5
gi|61966697 asparagine-linked glycosylation 10 homolog B [Homo s... 27 4.5
gi|21328446 hormone-sensitive lipase [Homo sapiens] 26 5.9
gi|126032350 protein kinase, DNA-activated, catalytic polypeptid... 26 5.9
gi|13654237 protein kinase, DNA-activated, catalytic polypeptide... 26 5.9
gi|113430845 PREDICTED: similar to protein kinase, DNA-activated... 26 5.9
gi|160707881 formin 2 [Homo sapiens] 26 7.7
gi|40806187 ADAM metallopeptidase with thrombospondin type 1 mot... 26 7.7
>gi|20143935 relaxin 2 isoform 2 [Homo sapiens]
Length = 117
Score = 240 bits (612), Expect = 2e-64
Identities = 117/117 (100%), Positives = 117/117 (100%)
Query: 1 MPRLFFFHLLGVCLLLNQFSRAVADSWMEEVIKLCGRELVRAQIAICGMSTWSKRSLSQE 60
MPRLFFFHLLGVCLLLNQFSRAVADSWMEEVIKLCGRELVRAQIAICGMSTWSKRSLSQE
Sbjct: 1 MPRLFFFHLLGVCLLLNQFSRAVADSWMEEVIKLCGRELVRAQIAICGMSTWSKRSLSQE 60
Query: 61 DAPQTPRPVAGDFIQTVSLGISPDGGKALRTGSCFTREFLGALSKLCHPSSTKIQKP 117
DAPQTPRPVAGDFIQTVSLGISPDGGKALRTGSCFTREFLGALSKLCHPSSTKIQKP
Sbjct: 61 DAPQTPRPVAGDFIQTVSLGISPDGGKALRTGSCFTREFLGALSKLCHPSSTKIQKP 117
>gi|20143933 relaxin 2 isoform 1 preproprotein [Homo sapiens]
Length = 185
Score = 145 bits (366), Expect = 7e-36
Identities = 70/70 (100%), Positives = 70/70 (100%)
Query: 1 MPRLFFFHLLGVCLLLNQFSRAVADSWMEEVIKLCGRELVRAQIAICGMSTWSKRSLSQE 60
MPRLFFFHLLGVCLLLNQFSRAVADSWMEEVIKLCGRELVRAQIAICGMSTWSKRSLSQE
Sbjct: 1 MPRLFFFHLLGVCLLLNQFSRAVADSWMEEVIKLCGRELVRAQIAICGMSTWSKRSLSQE 60
Query: 61 DAPQTPRPVA 70
DAPQTPRPVA
Sbjct: 61 DAPQTPRPVA 70
>gi|5902052 relaxin 1 preproprotein [Homo sapiens]
Length = 185
Score = 129 bits (323), Expect = 6e-31
Identities = 62/70 (88%), Positives = 64/70 (91%)
Query: 1 MPRLFFFHLLGVCLLLNQFSRAVADSWMEEVIKLCGRELVRAQIAICGMSTWSKRSLSQE 60
MPRLF FHLL CLLLNQFSRAVA W ++VIKLCGRELVRAQIAICGMSTWSKRSLSQE
Sbjct: 1 MPRLFLFHLLEFCLLLNQFSRAVAAKWKDDVIKLCGRELVRAQIAICGMSTWSKRSLSQE 60
Query: 61 DAPQTPRPVA 70
DAPQTPRPVA
Sbjct: 61 DAPQTPRPVA 70
>gi|38569396 insulin-like 6 precursor [Homo sapiens]
Length = 213
Score = 43.9 bits (102), Expect = 3e-05
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 1 MPRLFFFHLLGVCLLLNQFSRAVADSWMEEVIKLCGRELVRAQIAICGMSTWSKRSLSQE 60
MPRL LL + LLL +FSR ++D + KLCGR LV+ +CG + WS+ +E
Sbjct: 1 MPRLLRLSLLWLGLLLVRFSRELSD--ISSARKLCGRYLVKEIEKLCGHANWSQFRFEEE 58
>gi|38569233 insulin-like 5 precursor [Homo sapiens]
Length = 135
Score = 36.2 bits (82), Expect = 0.006
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 22 AVADSWMEEVIKLCGRELVRAQIAICGMSTWSKRSLSQEDAPQTPRPVAGDFIQ 75
A+++ +E ++LCG E +R I IC S W + QE PQ + G+ Q
Sbjct: 16 AISEVRSKESVRLCGLEYIRTVIYICASSRWRRH---QEGIPQAQQAETGNSFQ 66
>gi|18254464 relaxin 3 preproprotein [Homo sapiens]
Length = 142
Score = 34.7 bits (78), Expect = 0.017
Identities = 19/62 (30%), Positives = 27/62 (43%)
Query: 1 MPRLFFFHLLGVCLLLNQFSRAVADSWMEEVIKLCGRELVRAQIAICGMSTWSKRSLSQE 60
M R LL V +L + ++LCGRE +RA I CG S W + +
Sbjct: 1 MARYMLLLLLAVWVLTGELWPGAEARAAPYGVRLCGREFIRAVIFTCGGSRWRRSDILAH 60
Query: 61 DA 62
+A
Sbjct: 61 EA 62
>gi|239753559 PREDICTED: hypothetical protein XP_002345696 [Homo
sapiens]
Length = 366
Score = 33.5 bits (75), Expect = 0.037
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 30 EVIKLCGRELVRAQIAICGMSTWSKRSLSQEDAPQTPRPVAGDFIQTVSLGISPDGGKAL 89
+VI+LCG +L R ++ CG +T Q D +T +P GD + I G K L
Sbjct: 64 DVIELCGNQLSRLRLQ-CGKATNGIEGTHQADQAETGQPCVGDPSCHDNAAIMDSGPKEL 122
Query: 90 RTG 92
G
Sbjct: 123 TPG 125
>gi|239748103 PREDICTED: hypothetical protein [Homo sapiens]
Length = 366
Score = 33.5 bits (75), Expect = 0.037
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 30 EVIKLCGRELVRAQIAICGMSTWSKRSLSQEDAPQTPRPVAGDFIQTVSLGISPDGGKAL 89
+VI+LCG +L R ++ CG +T Q D +T +P GD + I G K L
Sbjct: 64 DVIELCGNQLSRLRLQ-CGKATNGIEGTHQADQAETGQPCVGDPSCHDNAAIMDSGPKEL 122
Query: 90 RTG 92
G
Sbjct: 123 TPG 125
>gi|239741999 PREDICTED: hypothetical protein XP_002342370 [Homo
sapiens]
Length = 366
Score = 33.5 bits (75), Expect = 0.037
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 30 EVIKLCGRELVRAQIAICGMSTWSKRSLSQEDAPQTPRPVAGDFIQTVSLGISPDGGKAL 89
+VI+LCG +L R ++ CG +T Q D +T +P GD + I G K L
Sbjct: 64 DVIELCGNQLSRLRLQ-CGKATNGIEGTHQADQAETGQPCVGDPSCHDNAAIMDSGPKEL 122
Query: 90 RTG 92
G
Sbjct: 123 TPG 125
>gi|38327535 insulin-like 3 precursor [Homo sapiens]
Length = 131
Score = 29.6 bits (65), Expect = 0.53
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 33 KLCGRELVRAQIAICGMSTWS 53
KLCG VRA + +CG WS
Sbjct: 32 KLCGHHFVRALVRVCGGPRWS 52
>gi|4557669 interleukin 4 receptor alpha chain isoform a precursor
[Homo sapiens]
Length = 825
Score = 28.5 bits (62), Expect = 1.2
Identities = 17/54 (31%), Positives = 22/54 (40%)
Query: 9 LLGVCLLLNQFSRAVADSWMEEVIKLCGRELVRAQIAICGMSTWSKRSLSQEDA 62
+L VCLL + W +++ LV I S W KRS QE A
Sbjct: 244 ILAVCLLCYVSITKIKKEWWDQIPNPARSRLVAIIIQDAQGSQWEKRSRGQEPA 297
>gi|14210524 BCL2-related ovarian killer [Homo sapiens]
Length = 212
Score = 27.7 bits (60), Expect = 2.0
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 9/57 (15%)
Query: 15 LLNQFSRAVADSWMEEVIKLCGRELVRAQIAICGMSTWSKRSLSQEDAPQTPRPVAG 71
+++ F R+ D + K GRE V A++ G+S WS AP+ PV G
Sbjct: 14 IMDAFDRSPTDKELVAQAKALGREYVHARLLRAGLS-WS--------APERAAPVPG 61
>gi|22902136 osterix [Homo sapiens]
Length = 431
Score = 26.6 bits (57), Expect = 4.5
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 55 RSLSQEDAPQTPRPVAGDFIQTVSLGISPDGGKAL 89
RS +E+A QTPRP A + G SP+ L
Sbjct: 395 RSTGEEEASQTPRPSASPATPEKAPGGSPEQSNLL 429
>gi|239755922 PREDICTED: similar to Uncharacterized protein FLJ42957
[Homo sapiens]
Length = 143
Score = 26.6 bits (57), Expect = 4.5
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 55 RSLSQEDAPQTPRPVAGDFIQTVSLGISPD-GGKALRTGSCF 95
RSLSQ A QTPRP A + + L S + GG + C+
Sbjct: 85 RSLSQHPATQTPRPQARASSRYLELHRSQNRGGSEFKFWFCY 126
>gi|239750440 PREDICTED: hypothetical protein XP_002347362 [Homo
sapiens]
Length = 143
Score = 26.6 bits (57), Expect = 4.5
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 55 RSLSQEDAPQTPRPVAGDFIQTVSLGISPD-GGKALRTGSCF 95
RSLSQ A QTPRP A + + L S + GG + C+
Sbjct: 85 RSLSQHPATQTPRPQARASSRYLELHRSQNRGGSEFKFWFCY 126
>gi|239744742 PREDICTED: hypothetical protein XP_002343249 [Homo
sapiens]
Length = 143
Score = 26.6 bits (57), Expect = 4.5
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 55 RSLSQEDAPQTPRPVAGDFIQTVSLGISPD-GGKALRTGSCF 95
RSLSQ A QTPRP A + + L S + GG + C+
Sbjct: 85 RSLSQHPATQTPRPQARASSRYLELHRSQNRGGSEFKFWFCY 126
>gi|147904264 asparagine-linked glycosylation 10 homolog (yeast,
alpha-1,2-glucosyltransferase) [Homo sapiens]
Length = 473
Score = 26.6 bits (57), Expect = 4.5
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 13 CLLLNQFSRAVADSWMEEVIKL 34
CLL + FSRA+ + +M+E+ L
Sbjct: 21 CLLFSAFSRALREPYMDEIFHL 42
>gi|61966697 asparagine-linked glycosylation 10 homolog B [Homo
sapiens]
Length = 473
Score = 26.6 bits (57), Expect = 4.5
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 13 CLLLNQFSRAVADSWMEEVIKL 34
CLL + FSRA+ + +M+E+ L
Sbjct: 21 CLLFSAFSRALREPYMDEIFHL 42
>gi|21328446 hormone-sensitive lipase [Homo sapiens]
Length = 1076
Score = 26.2 bits (56), Expect = 5.9
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 14 LLLNQFSRAVADSWMEEVIKLCGRELVRAQIAICGMSTWSKRSLSQEDAPQTPRPVAGDF 73
LLL F R A SW+ ++L GR+ + I + +RS+S+ Q P+ D
Sbjct: 815 LLLRDF-RLGASSWLNSFLELSGRKSQKMSEPI---AEPMRRSVSEAALAQPQGPLGTDS 870
Query: 74 IQTVSL 79
++ ++L
Sbjct: 871 LKNLTL 876
>gi|126032350 protein kinase, DNA-activated, catalytic polypeptide
isoform 2 [Homo sapiens]
Length = 4097
Score = 26.2 bits (56), Expect = 5.9
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 76 TVSLGISPDGGKALRTGSCFTREFLGALSKLCHPSS 111
T L SP+G K L+ C T + LC P+S
Sbjct: 1346 TTLLNTSPEGWKLLKKDLCNTHLMRVLVQTLCEPAS 1381
>gi|13654237 protein kinase, DNA-activated, catalytic polypeptide
isoform 1 [Homo sapiens]
Length = 4128
Score = 26.2 bits (56), Expect = 5.9
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 76 TVSLGISPDGGKALRTGSCFTREFLGALSKLCHPSS 111
T L SP+G K L+ C T + LC P+S
Sbjct: 1346 TTLLNTSPEGWKLLKKDLCNTHLMRVLVQTLCEPAS 1381
>gi|113430845 PREDICTED: similar to protein kinase, DNA-activated,
catalytic polypeptide [Homo sapiens]
Length = 4096
Score = 26.2 bits (56), Expect = 5.9
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 76 TVSLGISPDGGKALRTGSCFTREFLGALSKLCHPSS 111
T L SP+G K L+ C T + LC P+S
Sbjct: 1346 TTLLNTSPEGWKLLKKDLCNTHLMRVLVQTLCEPAS 1381
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 25.8 bits (55), Expect = 7.7
Identities = 21/92 (22%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
Query: 28 MEEVIKLCGRELVRAQIAICGMSTWSKRSLSQEDA--PQTPRPVAGDFIQTVSLGISPDG 85
+++ I+L ++ + Q+ + + ++E A P P G F+ + P G
Sbjct: 199 IQQAIRLQQQQQQQLQLQLQQQQQQQQLQGAEEPAAPPTAVSPQPGAFLGLDRFLLGPSG 258
Query: 86 GKALRTGSCFTREFLGALSKLCHPSSTKIQKP 117
G GS T + L ALS L + + ++P
Sbjct: 259 GAGEAPGSPDTEQALSALSDLPESLAAEPREP 290
>gi|40806187 ADAM metallopeptidase with thrombospondin type 1 motif,
18 preproprotein [Homo sapiens]
Length = 1221
Score = 25.8 bits (55), Expect = 7.7
Identities = 12/48 (25%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 27 WMEEVIKLCGRELV-RAQIAICGMSTWSKRSLSQEDAPQTPRPVAGDF 73
W V C + + A+ +CG+S W ++ + PRP+ G +
Sbjct: 545 WCHRVGHRCETKFMPAAEGTVCGLSMWCRQGQCVKFGELGPRPIHGQW 592
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.137 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,740,410
Number of Sequences: 37866
Number of extensions: 187042
Number of successful extensions: 564
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 546
Number of HSP's gapped (non-prelim): 25
length of query: 117
length of database: 18,247,518
effective HSP length: 87
effective length of query: 30
effective length of database: 14,953,176
effective search space: 448595280
effective search space used: 448595280
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.