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Search of human proteins with 20070321
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|20070321 nicotinamide mononucleotide adenylyltransferase 1
[Homo sapiens]
(279 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|20070321 nicotinamide mononucleotide adenylyltransferase 1 [H... 566 e-162
gi|30039706 nicotinamide mononucleotide adenylyltransferase 3 [H... 201 8e-52
gi|24307989 nicotinamide mononucleotide adenylyltransferase 2 is... 179 2e-45
gi|25141325 nicotinamide mononucleotide adenylyltransferase 2 is... 143 2e-34
gi|145275208 myosin IIIA [Homo sapiens] 32 0.62
gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi... 32 0.80
gi|20336298 DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 isoform 2 ... 31 1.1
gi|17505907 DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 isoform 1 ... 31 1.1
gi|38570099 glutamine-rich 1 [Homo sapiens] 30 1.8
gi|38570097 glutamine-rich 1 [Homo sapiens] 30 1.8
gi|226246595 speedy homolog E6 [Homo sapiens] 30 2.3
gi|239743311 PREDICTED: similar to speedy homolog A isoform 1 [H... 30 2.3
gi|239743297 PREDICTED: speedy homolog E6 [Homo sapiens] 30 2.3
gi|239508994 PREDICTED: similar to speedy homolog A isoform 7 [H... 30 2.3
gi|239508980 PREDICTED: speedy homolog E6 (Xenopus laevis) [Homo... 30 2.3
gi|126090663 zinc finger homeodomain 4 [Homo sapiens] 30 2.3
gi|33188443 microfilament and actin filament cross-linker protei... 29 4.0
gi|33188445 microfilament and actin filament cross-linker protei... 29 4.0
gi|148746195 trichohyalin [Homo sapiens] 29 4.0
gi|31377566 ring finger protein 168 [Homo sapiens] 29 4.0
gi|239743254 PREDICTED: hypothetical protein XP_002342780 [Homo ... 29 5.2
gi|239508929 PREDICTED: similar to Putative WBSCR19-like protein... 29 5.2
gi|28466983 leprecan-like 2 [Homo sapiens] 29 5.2
gi|30795188 Williams Beuren syndrome chromosome region 19 protei... 29 5.2
gi|223890153 DSN1, MIND kinetochore complex component, homolog i... 28 6.8
gi|223890149 DSN1, MIND kinetochore complex component, homolog i... 28 6.8
gi|223890147 DSN1, MIND kinetochore complex component, homolog i... 28 6.8
gi|223972618 DSN1, MIND kinetochore complex component, homolog i... 28 6.8
gi|194595492 speedy homolog E5 [Homo sapiens] 28 6.8
gi|45827701 pad-1-like [Homo sapiens] 28 6.8
>gi|20070321 nicotinamide mononucleotide adenylyltransferase 1 [Homo
sapiens]
Length = 279
Score = 566 bits (1458), Expect = e-162
Identities = 279/279 (100%), Positives = 279/279 (100%)
Query: 1 MENSEKTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGL 60
MENSEKTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGL
Sbjct: 1 MENSEKTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGL 60
Query: 61 IPAYHRVIMAELATKNSKWVEVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTL 120
IPAYHRVIMAELATKNSKWVEVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTL
Sbjct: 61 IPAYHRVIMAELATKNSKWVEVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTL 120
Query: 121 ERPGRKRKWTETQDSSQKKSLEPKTKAVPKVKLLCGADLLESFAVPNLWKSEDITQIVAN 180
ERPGRKRKWTETQDSSQKKSLEPKTKAVPKVKLLCGADLLESFAVPNLWKSEDITQIVAN
Sbjct: 121 ERPGRKRKWTETQDSSQKKSLEPKTKAVPKVKLLCGADLLESFAVPNLWKSEDITQIVAN 180
Query: 181 YGLICVTRAGNDAQKFIYESDVLWKHRSNIHVVNEWIANDISSTKIRRALRRGQSIRYLV 240
YGLICVTRAGNDAQKFIYESDVLWKHRSNIHVVNEWIANDISSTKIRRALRRGQSIRYLV
Sbjct: 181 YGLICVTRAGNDAQKFIYESDVLWKHRSNIHVVNEWIANDISSTKIRRALRRGQSIRYLV 240
Query: 241 PDLVQEYIEKHNLYSSESEDRNAGVILAPLQRNTAEAKT 279
PDLVQEYIEKHNLYSSESEDRNAGVILAPLQRNTAEAKT
Sbjct: 241 PDLVQEYIEKHNLYSSESEDRNAGVILAPLQRNTAEAKT 279
>gi|30039706 nicotinamide mononucleotide adenylyltransferase 3 [Homo
sapiens]
Length = 215
Score = 201 bits (510), Expect = 8e-52
Identities = 104/218 (47%), Positives = 137/218 (62%), Gaps = 19/218 (8%)
Query: 41 YTVVKGIISPVGDAYKKKGLIPAYHRVIMAELATKNSKWVEVDTWESLQKEWKETLKVLR 100
Y V++GIISPV D Y KK L ++HRV MA LA + S W+ VD WES Q +W ET+KVLR
Sbjct: 2 YQVIQGIISPVNDTYGKKDLAASHHRVAMARLALQTSDWIRVDPWESEQAQWMETVKVLR 61
Query: 101 HHQEKLEASDCDHQQNSPTLERPGRKRKWTETQDSSQKKSLEPKTKAVPKVKLLCGADLL 160
HH KL S P +E P K+L AVP++KLLCGAD+L
Sbjct: 62 HHHSKLLRSP-------PQMEGP------------DHGKALFSTPAAVPELKLLCGADVL 102
Query: 161 ESFAVPNLWKSEDITQIVANYGLICVTRAGNDAQKFIYESDVLWKHRSNIHVVNEWIAND 220
++F PNLWK I +IV +GL+CV R G+D + +I ES +L H+ NIH+ E + N+
Sbjct: 103 KTFQTPNLWKDAHIQEIVEKFGLVCVGRVGHDPKGYIAESPILRMHQHNIHLAKEPVQNE 162
Query: 221 ISSTKIRRALRRGQSIRYLVPDLVQEYIEKHNLYSSES 258
IS+T IRRAL +GQS++YL+PD V YI+ H LY+ S
Sbjct: 163 ISATYIRRALGQGQSVKYLIPDAVITYIKDHGLYTKGS 200
>gi|24307989 nicotinamide mononucleotide adenylyltransferase 2
isoform 1 [Homo sapiens]
Length = 307
Score = 179 bits (454), Expect = 2e-45
Identities = 103/307 (33%), Positives = 165/307 (53%), Gaps = 50/307 (16%)
Query: 1 MENSEKTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGL 60
M + KT V+LLACGSFNPIT H+++FE A+DY++ TGR+ V+ GI+SPV D+Y K+GL
Sbjct: 1 MTETTKTHVILLACGSFNPITKGHIQMFERARDYLHKTGRFIVIGGIVSPVHDSYGKQGL 60
Query: 61 IPAYHRVIMAELATKNSKWVEVDTWESLQKEWKETLKVLRHHQEKLE------ASDCDHQ 114
+ + HR+IM +LA +NS W+ VD WE Q W+ T VL HH++ ++ S+ +
Sbjct: 61 VSSRHRLIMCQLAVQNSDWIRVDPWECYQDTWQTTCSVLEHHRDLMKRVTGCILSNVNTP 120
Query: 115 QNSPTLERPGRK--------------------------------------RKWTETQDSS 136
+P + +P + ++T +++
Sbjct: 121 SMTPVIGQPQNETPQPIYQNSNVATKPTAAKILGKVGESLSRICCVRPPVERFTFVDENA 180
Query: 137 QKKSLEPKTKAVPKVKLLCGADLLESFAVPNLWKSEDITQIVANYGLICVTRAGNDAQKF 196
++ + ++ LLCG+DLLESF +P LW D+ IV ++G++ V R D +
Sbjct: 181 NLGTVMRYEEIELRILLLCGSDLLESFCIPGLWNEADMEVIVGDFGIVVVPRDAADTDRI 240
Query: 197 IYESDVLWKHRSNIHVVNEWIAND---ISSTKIRRALRRGQS--IRYLVPDLVQEYIEKH 251
+ S +L K+++NI VV + I + +SSTK R AL+ G + YL ++ +YI K
Sbjct: 241 MNHSSILRKYKNNIMVVKDDINHPMSVVSSTKSRLALQHGDGHVVDYLSQPVI-DYILKS 299
Query: 252 NLYSSES 258
LY + S
Sbjct: 300 QLYINAS 306
>gi|25141325 nicotinamide mononucleotide adenylyltransferase 2
isoform 2 [Homo sapiens]
Length = 302
Score = 143 bits (360), Expect = 2e-34
Identities = 87/281 (30%), Positives = 144/281 (51%), Gaps = 50/281 (17%)
Query: 27 LFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLIPAYHRVIMAELATKNSKWVEVDTWE 86
L E A+DY++ TGR+ V+ GI+SPV D+Y K+GL+ + HR+IM +LA +NS W+ VD WE
Sbjct: 22 LSERARDYLHKTGRFIVIGGIVSPVHDSYGKQGLVSSRHRLIMCQLAVQNSDWIRVDPWE 81
Query: 87 SLQKEWKETLKVLRHHQEKLE------ASDCDHQQNSPTLERPGRK-------------- 126
Q W+ T VL HH++ ++ S+ + +P + +P +
Sbjct: 82 CYQDTWQTTCSVLEHHRDLMKRVTGCILSNVNTPSMTPVIGQPQNETPQPIYQNSNVATK 141
Query: 127 ------------------------RKWTETQDSSQKKSLEPKTKAVPKVKLLCGADLLES 162
++T +++ ++ + ++ LLCG+DLLES
Sbjct: 142 PTAAKILGKVGESLSRICCVRPPVERFTFVDENANLGTVMRYEEIELRILLLCGSDLLES 201
Query: 163 FAVPNLWKSEDITQIVANYGLICVTRAGNDAQKFIYESDVLWKHRSNIHVVNEWIAND-- 220
F +P LW D+ IV ++G++ V R D + + S +L K+++NI VV + I +
Sbjct: 202 FCIPGLWNEADMEVIVGDFGIVVVPRDAADTDRIMNHSSILRKYKNNIMVVKDDINHPMS 261
Query: 221 -ISSTKIRRALRRGQS--IRYLVPDLVQEYIEKHNLYSSES 258
+SSTK R AL+ G + YL ++ +YI K LY + S
Sbjct: 262 VVSSTKSRLALQHGDGHVVDYLSQPVI-DYILKSQLYINAS 301
>gi|145275208 myosin IIIA [Homo sapiens]
Length = 1616
Score = 32.0 bits (71), Expect = 0.62
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Query: 71 ELATKNSKWVEVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQ-----QNSPTLERPGR 125
E++ K +++ +L+K KE + ++Q E +C+ + ERP
Sbjct: 1210 EVSPKQKSVKDLEENSNLRKVEKEEAMIQSYYQRYTEERNCEESKAAYLERKAISERPSY 1269
Query: 126 KRKWTETQDSSQKKSLEP 143
W ++S KK+LEP
Sbjct: 1270 PVPWLAENETSFKKTLEP 1287
>gi|7662238 apoptotic chromatin condensation inducer 1 [Homo
sapiens]
Length = 1341
Score = 31.6 bits (70), Expect = 0.80
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 122 RPGRKRKWTETQDSSQKK-----SLEPKTKAVPKVKLLCGADLLESFAVPNLWKSEDITQ 176
+PGRKR+W + ++QKK + E +P +K L G + + + SED T+
Sbjct: 844 QPGRKRRWGASTATTQKKPSISITTESLKSLIPDIKPLAGQEAVVDLHADDSRISEDETE 903
>gi|20336298 DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 isoform 2
[Homo sapiens]
Length = 585
Score = 31.2 bits (69), Expect = 1.1
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 141 LEPKTKAVPKVKLLCGADLLESFAVPNLWKSEDITQIVANYGLICVTRAGNDAQKFIYES 200
L PK KAV +V D L+SFA+P K + +T + + L+C+ A QK +E
Sbjct: 453 LNPKDKAVQEVCPPPAGDKLDSFAIPESLK-QHVTVVPSKLRLVCL--AAFILQKCKFEE 509
Query: 201 D 201
D
Sbjct: 510 D 510
>gi|17505907 DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 isoform 1
[Homo sapiens]
Length = 851
Score = 31.2 bits (69), Expect = 1.1
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 141 LEPKTKAVPKVKLLCGADLLESFAVPNLWKSEDITQIVANYGLICVTRAGNDAQKFIYES 200
L PK KAV +V D L+SFA+P K + +T + + L+C+ A QK +E
Sbjct: 453 LNPKDKAVQEVCPPPAGDKLDSFAIPESLK-QHVTVVPSKLRLVCL--AAFILQKCKFEE 509
Query: 201 D 201
D
Sbjct: 510 D 510
>gi|38570099 glutamine-rich 1 [Homo sapiens]
Length = 776
Score = 30.4 bits (67), Expect = 1.8
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 11/78 (14%)
Query: 127 RKWTETQDSSQKKSLEPKTKAVPKVKLLCGADLLESFAVPNLWKSEDITQIVANYGLICV 186
+ W +T+++ +K + + + + +LL + L S AV L NYGL +
Sbjct: 483 KNWAQTKNAELEKDAQNRLAPIGRRQLLRFQEDLISSAVAEL-----------NYGLCLM 531
Query: 187 TRAGNDAQKFIYESDVLW 204
TR + + Y+ DVL+
Sbjct: 532 TREARNGEGEPYDPDVLY 549
>gi|38570097 glutamine-rich 1 [Homo sapiens]
Length = 776
Score = 30.4 bits (67), Expect = 1.8
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 11/78 (14%)
Query: 127 RKWTETQDSSQKKSLEPKTKAVPKVKLLCGADLLESFAVPNLWKSEDITQIVANYGLICV 186
+ W +T+++ +K + + + + +LL + L S AV L NYGL +
Sbjct: 483 KNWAQTKNAELEKDAQNRLAPIGRRQLLRFQEDLISSAVAEL-----------NYGLCLM 531
Query: 187 TRAGNDAQKFIYESDVLW 204
TR + + Y+ DVL+
Sbjct: 532 TREARNGEGEPYDPDVLY 549
>gi|226246595 speedy homolog E6 [Homo sapiens]
Length = 402
Score = 30.0 bits (66), Expect = 2.3
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 125 RKRKWTETQDSSQKKSLEPKTKAVPKVKLLCG 156
RKR+W++ + +K L P+ + V++LCG
Sbjct: 70 RKREWSDESEEEPEKELAPEPEETWVVEMLCG 101
>gi|239743311 PREDICTED: similar to speedy homolog A isoform 1 [Homo
sapiens]
Length = 402
Score = 30.0 bits (66), Expect = 2.3
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 125 RKRKWTETQDSSQKKSLEPKTKAVPKVKLLCG 156
RKR+W++ + +K L P+ + V++LCG
Sbjct: 70 RKREWSDESEEEPEKELAPEPEETWVVEMLCG 101
>gi|239743297 PREDICTED: speedy homolog E6 [Homo sapiens]
Length = 402
Score = 30.0 bits (66), Expect = 2.3
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 125 RKRKWTETQDSSQKKSLEPKTKAVPKVKLLCG 156
RKR+W++ + +K L P+ + V++LCG
Sbjct: 70 RKREWSDESEEEPEKELAPEPEETWVVEMLCG 101
>gi|239508994 PREDICTED: similar to speedy homolog A isoform 7 [Homo
sapiens]
Length = 402
Score = 30.0 bits (66), Expect = 2.3
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 125 RKRKWTETQDSSQKKSLEPKTKAVPKVKLLCG 156
RKR+W++ + +K L P+ + V++LCG
Sbjct: 70 RKREWSDESEEEPEKELAPEPEETWVVEMLCG 101
>gi|239508980 PREDICTED: speedy homolog E6 (Xenopus laevis) [Homo
sapiens]
Length = 402
Score = 30.0 bits (66), Expect = 2.3
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 125 RKRKWTETQDSSQKKSLEPKTKAVPKVKLLCG 156
RKR+W++ + +K L P+ + V++LCG
Sbjct: 70 RKREWSDESEEEPEKELAPEPEETWVVEMLCG 101
>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
Length = 3571
Score = 30.0 bits (66), Expect = 2.3
Identities = 23/96 (23%), Positives = 48/96 (50%), Gaps = 24/96 (25%)
Query: 89 QKEWKETLKVLRHHQEKLEASDCDHQQNSPTL-------ERPGRKRK--------WTETQ 133
Q++ ++ K+L+ Q + ++DC ++ P+ E+P + ++ E +
Sbjct: 1779 QQQQQQASKLLKQEQSNIVSADCQIMKDVPSYKEAEDISEKPEKPKQEFISEGEGLKEGK 1838
Query: 134 DSSQKKSLEPKTKAVPKVKLLCGA------DLLESF 163
D+ ++KSLEP ++P ++ GA LLE+F
Sbjct: 1839 DTKKQKSLEP---SIPPPRIASGARGNAAKALLENF 1871
>gi|33188443 microfilament and actin filament cross-linker protein
isoform b [Homo sapiens]
Length = 5938
Score = 29.3 bits (64), Expect = 4.0
Identities = 23/130 (17%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 138 KKSLEPKTKAVPKVKLLCGADLLESFAVPNLWKSEDITQIVANYGLICVTRAGNDA--QK 195
+K L +T V +K G +L+E+ W + ++ + +C + ++
Sbjct: 5252 QKELGKRTGTVQVLKR-SGRELIENSRDDTTWVKGQLQELSTRWDTVCKLSVSKQSRLEQ 5310
Query: 196 FIYESDVLWKHRSNIHVVNEWIANDISSTKIRRALRRGQSIRYLVPDLVQEYIEKHNLYS 255
+ +++V R +H++ EW++ + + R AL + +Q I+ H +
Sbjct: 5311 ALKQAEVF---RDTVHMLLEWLSEAEQTLRFRGALPDD-------TEALQSLIDTHKEFM 5360
Query: 256 SESEDRNAGV 265
+ E++ V
Sbjct: 5361 KKVEEKRVDV 5370
Score = 28.5 bits (62), Expect = 6.8
Identities = 21/94 (22%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 88 LQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLERPGRKRKWTETQDSSQKKSLEPKTKA 147
++ ++E L + HQ++LE + + N+ LE +W ET + ++ EP +
Sbjct: 5399 IRARFEEVLTWAKQHQQRLETALSELVANAELLEELLAWIQWAET--TLIQRDQEPIPQN 5456
Query: 148 VPKVKLLCGADLLESFAVPNLWKSEDITQIVANY 181
+ +VK L ++F K D+ ++ Y
Sbjct: 5457 IDRVKALIAEH--QTFMEEMTRKQPDVDRVTKTY 5488
>gi|33188445 microfilament and actin filament cross-linker protein
isoform a [Homo sapiens]
Length = 5430
Score = 29.3 bits (64), Expect = 4.0
Identities = 23/130 (17%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 138 KKSLEPKTKAVPKVKLLCGADLLESFAVPNLWKSEDITQIVANYGLICVTRAGNDA--QK 195
+K L +T V +K G +L+E+ W + ++ + +C + ++
Sbjct: 4750 QKELGKRTGTVQVLKR-SGRELIENSRDDTTWVKGQLQELSTRWDTVCKLSVSKQSRLEQ 4808
Query: 196 FIYESDVLWKHRSNIHVVNEWIANDISSTKIRRALRRGQSIRYLVPDLVQEYIEKHNLYS 255
+ +++V R +H++ EW++ + + R AL + +Q I+ H +
Sbjct: 4809 ALKQAEVF---RDTVHMLLEWLSEAEQTLRFRGALPDD-------TEALQSLIDTHKEFM 4858
Query: 256 SESEDRNAGV 265
+ E++ V
Sbjct: 4859 KKVEEKRVDV 4868
Score = 28.5 bits (62), Expect = 6.8
Identities = 21/94 (22%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 88 LQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLERPGRKRKWTETQDSSQKKSLEPKTKA 147
++ ++E L + HQ++LE + + N+ LE +W ET + ++ EP +
Sbjct: 4897 IRARFEEVLTWAKQHQQRLETALSELVANAELLEELLAWIQWAET--TLIQRDQEPIPQN 4954
Query: 148 VPKVKLLCGADLLESFAVPNLWKSEDITQIVANY 181
+ +VK L ++F K D+ ++ Y
Sbjct: 4955 IDRVKALIAEH--QTFMEEMTRKQPDVDRVTKTY 4986
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 29.3 bits (64), Expect = 4.0
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 86 ESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLERPGRKRKWTETQDSSQKK 139
E +KEW++ VLR +EKL+ + Q+ E RK + E + Q++
Sbjct: 240 EEEEKEWRKRETVLRKEEEKLQEEEPQRQRELQEEEEQLRKLERQELRRERQEE 293
>gi|31377566 ring finger protein 168 [Homo sapiens]
Length = 571
Score = 29.3 bits (64), Expect = 4.0
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
Query: 74 TKNSKWVEVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLERPGRKRKWTETQ 133
T+ + V V+ W +QK + K+ QE E + D Q L +PG R+ E +
Sbjct: 66 TRRNSLVNVELWTIIQKHYPRECKLRASGQESEEVA--DDYQPVRLLSKPGELRREYEEE 123
Query: 134 DS----SQKKSLEPKTKA 147
S ++ S E + KA
Sbjct: 124 ISKVAAERRASEEEENKA 141
>gi|239743254 PREDICTED: hypothetical protein XP_002342780 [Homo
sapiens]
Length = 575
Score = 28.9 bits (63), Expect = 5.2
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 125 RKRKWTETQDSSQKKSLEPKTKAVPKVKLLCG 156
RK++W++ + +K L P+ + V++LCG
Sbjct: 70 RKKEWSDESEEEPEKELAPEPEETWVVEMLCG 101
Score = 28.9 bits (63), Expect = 5.2
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 125 RKRKWTETQDSSQKKSLEPKTKAVPKVKLLCG 156
RK++W++ + +K L P+ + V++LCG
Sbjct: 293 RKKEWSDESEEEPEKELAPEPEETWVVEMLCG 324
>gi|239508929 PREDICTED: similar to Putative WBSCR19-like protein 7
[Homo sapiens]
Length = 575
Score = 28.9 bits (63), Expect = 5.2
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 125 RKRKWTETQDSSQKKSLEPKTKAVPKVKLLCG 156
RK++W++ + +K L P+ + V++LCG
Sbjct: 70 RKKEWSDESEEEPEKELAPEPEETWVVEMLCG 101
Score = 28.9 bits (63), Expect = 5.2
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 125 RKRKWTETQDSSQKKSLEPKTKAVPKVKLLCG 156
RK++W++ + +K L P+ + V++LCG
Sbjct: 293 RKKEWSDESEEEPEKELAPEPEETWVVEMLCG 324
>gi|28466983 leprecan-like 2 [Homo sapiens]
Length = 736
Score = 28.9 bits (63), Expect = 5.2
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 13/71 (18%)
Query: 84 TW--ESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLERPGRKRKWTETQDSSQKKSL 141
TW E ++EW E ++L+ QE+ E + + P+ E P R+ + +
Sbjct: 674 TWAPEHREQEWIEAKELLQESQEEEEEEEEEMPSKDPSPEPPSRRH-----------QRV 722
Query: 142 EPKTKAVPKVK 152
+ KT P+V+
Sbjct: 723 QDKTGRAPRVR 733
>gi|30795188 Williams Beuren syndrome chromosome region 19 protein
[Homo sapiens]
Length = 336
Score = 28.9 bits (63), Expect = 5.2
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 125 RKRKWTETQDSSQKKSLEPKTKAVPKVKLLCG 156
RKR+W++ + +K L P+ + V+ LCG
Sbjct: 30 RKREWSDESEEEPEKELAPEPEETWVVETLCG 61
>gi|223890153 DSN1, MIND kinetochore complex component, homolog
isoform 3 [Homo sapiens]
Length = 340
Score = 28.5 bits (62), Expect = 6.8
Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 102 HQEKLEASDCDHQQNSPTLERPGRKRKWTET--QDSSQKKSLEPKTKAVPKVKLLCGADL 159
HQE+L++ + R++ W ++++++KSL P + + ++ DL
Sbjct: 53 HQERLQSKSLHLSPQEQSASYQDRRQSWRRASMKETNRRKSLHPIHQGITELSRSISVDL 112
Query: 160 LES 162
ES
Sbjct: 113 AES 115
>gi|223890149 DSN1, MIND kinetochore complex component, homolog
isoform 1 [Homo sapiens]
Length = 356
Score = 28.5 bits (62), Expect = 6.8
Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 102 HQEKLEASDCDHQQNSPTLERPGRKRKWTET--QDSSQKKSLEPKTKAVPKVKLLCGADL 159
HQE+L++ + R++ W ++++++KSL P + + ++ DL
Sbjct: 69 HQERLQSKSLHLSPQEQSASYQDRRQSWRRASMKETNRRKSLHPIHQGITELSRSISVDL 128
Query: 160 LES 162
ES
Sbjct: 129 AES 131
>gi|223890147 DSN1, MIND kinetochore complex component, homolog
isoform 1 [Homo sapiens]
Length = 356
Score = 28.5 bits (62), Expect = 6.8
Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 102 HQEKLEASDCDHQQNSPTLERPGRKRKWTET--QDSSQKKSLEPKTKAVPKVKLLCGADL 159
HQE+L++ + R++ W ++++++KSL P + + ++ DL
Sbjct: 69 HQERLQSKSLHLSPQEQSASYQDRRQSWRRASMKETNRRKSLHPIHQGITELSRSISVDL 128
Query: 160 LES 162
ES
Sbjct: 129 AES 131
>gi|223972618 DSN1, MIND kinetochore complex component, homolog
isoform 1 [Homo sapiens]
Length = 356
Score = 28.5 bits (62), Expect = 6.8
Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 102 HQEKLEASDCDHQQNSPTLERPGRKRKWTET--QDSSQKKSLEPKTKAVPKVKLLCGADL 159
HQE+L++ + R++ W ++++++KSL P + + ++ DL
Sbjct: 69 HQERLQSKSLHLSPQEQSASYQDRRQSWRRASMKETNRRKSLHPIHQGITELSRSISVDL 128
Query: 160 LES 162
ES
Sbjct: 129 AES 131
>gi|194595492 speedy homolog E5 [Homo sapiens]
Length = 337
Score = 28.5 bits (62), Expect = 6.8
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 125 RKRKWTETQDSSQKKSLEPKTKAVPKVKLLCG 156
RKR+W++ +K L P+ + V++LCG
Sbjct: 30 RKREWSDESAEEPEKELAPEPEETWVVEMLCG 61
>gi|45827701 pad-1-like [Homo sapiens]
Length = 2298
Score = 28.5 bits (62), Expect = 6.8
Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Query: 121 ERPGRKRKWTETQ-----DSSQKKSLEPKTKAVPKVKLLCGADLLESFAVPNLWKSED 173
E P KR TQ DSS+K S EPK VP+ K + +DL + P KS +
Sbjct: 657 EEPAGKRDRDGTQSLAANDSSRKNSWEPKPITVPQFKQML-SDLFTARGSPFKTKSSE 713
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.130 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,408,920
Number of Sequences: 37866
Number of extensions: 436995
Number of successful extensions: 1605
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 1570
Number of HSP's gapped (non-prelim): 59
length of query: 279
length of database: 18,247,518
effective HSP length: 101
effective length of query: 178
effective length of database: 14,423,052
effective search space: 2567303256
effective search space used: 2567303256
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.