Guide to the Human Genome
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Name: NMNAT2 Sequence: fasta or formatted (307aa) NCBI GI: 24307989
Description:

nicotinamide mononucleotide adenylyltransferase 2 isoform 1

Referenced in:

Vitamin Pathways, Coenzymes, and 1-Carbon Metabolism

Other entries for this name:
alt prot [302aa] nicotinamide mononucleotide adenylyltransferase 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.9         12           2
 C cysteine            2.9          9           2
 D aspartate           5.9         18           2
 E glutamate           4.6         14           2
 F phenylalanine       2.3          7           1
 G glycine             6.2         19           2
 H histidine           3.6         11           2
 I isoleucine          8.1         25           1
 K lysine              4.2         13           1
 L leucine             8.1         25           3
 M methionine          3.3         10           1
 N asparagine          4.9         15           2
 P proline             4.9         15           2
 Q glutamine           4.2         13           1
 R arginine            5.5         17           1
 S serine              7.5         23           2
 T threonine           6.2         19           2
 V valine              9.4         29           3
 W tryptophan          1.3          4           1
 Y tyrosine            2.9          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nicotinamide mononucleotide adenylyltransferase 2 is... 
NMNAT2                0.906   nicotinamide mononucleotide adenylyltransferase 2 is...
NMNAT1                0.255   nicotinamide mononucleotide adenylyltransferase 1 [H...
NMNAT3                0.106   nicotinamide mononucleotide adenylyltransferase 3 [H...
PAX6                  0.013   paired box gene 6 isoform a 
PAX6                  0.013   paired box gene 6 isoform b 
PAX6                  0.013   paired box gene 6 isoform a 
BAIAP2L1              0.010   BAI1-associated protein 2-like 1 
ANKRD17               0.008   ankyrin repeat domain protein 17 isoform a 
ARHGAP11B             0.008   Rho GTPase activating protein 11B 
RAPGEF4               0.005   Rap guanine nucleotide exchange factor (GEF) 4 isof...
RAPGEF4               0.005   Rap guanine nucleotide exchange factor (GEF) 4 isof...
NAGA                  0.005   alpha-N-acetylgalactosaminidase precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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