Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 19923667
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|19923667 radical S-adenosyl methionine domain containing 2
[Homo sapiens]
(361 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|19923667 radical S-adenosyl methionine domain containing 2 [H... 744 0.0
gi|116734664 molybdenum cofactor synthesis-step 1 protein isofor... 35 0.080
gi|116734666 molybdenum cofactor synthesis-step 1 protein isofor... 35 0.080
gi|22027536 molybdenum cofactor synthesis-step 1 protein isoform... 35 0.080
gi|116734668 molybdenum cofactor synthesis-step 1 protein isofor... 35 0.080
gi|21361693 solute carrier family 6, member 15 isoform 2 [Homo s... 33 0.40
gi|33354281 solute carrier family 6, member 15 isoform 1 [Homo s... 33 0.40
gi|28274703 family with sequence similarity 9, member C [Homo sa... 33 0.40
gi|33188443 microfilament and actin filament cross-linker protei... 32 0.68
gi|68348716 AF4/FMR2 family, member 3 isoform 2 [Homo sapiens] 31 1.5
gi|68348714 AF4/FMR2 family, member 3 isoform 1 [Homo sapiens] 31 1.5
gi|62750354 matrin 3 [Homo sapiens] 29 5.7
gi|21626466 matrin 3 [Homo sapiens] 29 5.7
gi|58331202 RAP1A, member of RAS oncogene family [Homo sapiens] 29 7.5
gi|4506413 RAP1A, member of RAS oncogene family [Homo sapiens] 29 7.5
gi|148727288 low density lipoprotein receptor-related protein 6 ... 29 7.5
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo... 29 7.5
gi|154277116 spectrin repeat containing, nuclear envelope 1 isof... 29 7.5
gi|239753557 PREDICTED: zinc finger protein 852 [Homo sapiens] 28 9.8
gi|169165837 PREDICTED: zinc finger protein 852 [Homo sapiens] 28 9.8
gi|239742001 PREDICTED: zinc finger protein 852 [Homo sapiens] 28 9.8
gi|48255891 protein kinase C substrate 80K-H isoform 2 [Homo sap... 28 9.8
gi|48255889 protein kinase C substrate 80K-H isoform 1 [Homo sap... 28 9.8
gi|31621309 leucine rich repeat containing 6 [Homo sapiens] 28 9.8
>gi|19923667 radical S-adenosyl methionine domain containing 2 [Homo
sapiens]
Length = 361
Score = 744 bits (1921), Expect = 0.0
Identities = 361/361 (100%), Positives = 361/361 (100%)
Query: 1 MWVLTPAAFAGKLLSVFRQPLSSLWRSLVPLFCWLRATFWLLATKRRKQQLVLRGPDETK 60
MWVLTPAAFAGKLLSVFRQPLSSLWRSLVPLFCWLRATFWLLATKRRKQQLVLRGPDETK
Sbjct: 1 MWVLTPAAFAGKLLSVFRQPLSSLWRSLVPLFCWLRATFWLLATKRRKQQLVLRGPDETK 60
Query: 61 EEEEDPPLPTTPTSVNYHFTRQCNYKCGFCFHTAKTSFVLPLEEAKRGLLLLKEAGMEKI 120
EEEEDPPLPTTPTSVNYHFTRQCNYKCGFCFHTAKTSFVLPLEEAKRGLLLLKEAGMEKI
Sbjct: 61 EEEEDPPLPTTPTSVNYHFTRQCNYKCGFCFHTAKTSFVLPLEEAKRGLLLLKEAGMEKI 120
Query: 121 NFSGGEPFLQDRGEYLGKLVRFCKVELRLPSVSIVSNGSLIRERWFQNYGEYLDILAISC 180
NFSGGEPFLQDRGEYLGKLVRFCKVELRLPSVSIVSNGSLIRERWFQNYGEYLDILAISC
Sbjct: 121 NFSGGEPFLQDRGEYLGKLVRFCKVELRLPSVSIVSNGSLIRERWFQNYGEYLDILAISC 180
Query: 181 DSFDEEVNVLIGRGQGKKNHVENLQKLRRWCRDYRVAFKINSVINRFNVEEDMTEQIKAL 240
DSFDEEVNVLIGRGQGKKNHVENLQKLRRWCRDYRVAFKINSVINRFNVEEDMTEQIKAL
Sbjct: 181 DSFDEEVNVLIGRGQGKKNHVENLQKLRRWCRDYRVAFKINSVINRFNVEEDMTEQIKAL 240
Query: 241 NPVRWKVFQCLLIEGENCGEDALREAERFVIGDEEFERFLERHKEVSCLVPESNQKMKDS 300
NPVRWKVFQCLLIEGENCGEDALREAERFVIGDEEFERFLERHKEVSCLVPESNQKMKDS
Sbjct: 241 NPVRWKVFQCLLIEGENCGEDALREAERFVIGDEEFERFLERHKEVSCLVPESNQKMKDS 300
Query: 301 YLILDEYMRFLNCRKGRKDPSKSILDVGVEEAIKFSGFDEKMFLKRGGKYIWSKADLKLD 360
YLILDEYMRFLNCRKGRKDPSKSILDVGVEEAIKFSGFDEKMFLKRGGKYIWSKADLKLD
Sbjct: 301 YLILDEYMRFLNCRKGRKDPSKSILDVGVEEAIKFSGFDEKMFLKRGGKYIWSKADLKLD 360
Query: 361 W 361
W
Sbjct: 361 W 361
>gi|116734664 molybdenum cofactor synthesis-step 1 protein isoform 2
[Homo sapiens]
Length = 636
Score = 35.4 bits (80), Expect = 0.080
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 10/133 (7%)
Query: 80 TRQCNYKCGFCFH------TAKTSFVLPLEEAKRGLLLLKEAGMEKINFSGGEPFLQDRG 133
T +CN +C +C T K + + E L +KE G++KI +GGEP + R
Sbjct: 77 TEKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKE-GIDKIRLTGGEPLI--RP 133
Query: 134 EYLGKLVRFCKVELRLPSVSIVSNGSLIRERWFQNYGEYLDILAISCDSFDEEVNVLIGR 193
+ + + + ++E L ++ + +NG + Q L + IS D+ I R
Sbjct: 134 DVVDIVAQLQRLE-GLRTIGVTTNGINLARLLPQLQKAGLSAINISLDTLVPAKFEFIVR 192
Query: 194 GQGKKNHVENLQK 206
+G +E + K
Sbjct: 193 RKGFHKVMEGIHK 205
>gi|116734666 molybdenum cofactor synthesis-step 1 protein isoform 3
[Homo sapiens]
Length = 620
Score = 35.4 bits (80), Expect = 0.080
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 10/133 (7%)
Query: 80 TRQCNYKCGFCFH------TAKTSFVLPLEEAKRGLLLLKEAGMEKINFSGGEPFLQDRG 133
T +CN +C +C T K + + E L +KE G++KI +GGEP + R
Sbjct: 77 TEKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKE-GIDKIRLTGGEPLI--RP 133
Query: 134 EYLGKLVRFCKVELRLPSVSIVSNGSLIRERWFQNYGEYLDILAISCDSFDEEVNVLIGR 193
+ + + + ++E L ++ + +NG + Q L + IS D+ I R
Sbjct: 134 DVVDIVAQLQRLE-GLRTIGVTTNGINLARLLPQLQKAGLSAINISLDTLVPAKFEFIVR 192
Query: 194 GQGKKNHVENLQK 206
+G +E + K
Sbjct: 193 RKGFHKVMEGIHK 205
>gi|22027536 molybdenum cofactor synthesis-step 1 protein isoform 1
[Homo sapiens]
Length = 385
Score = 35.4 bits (80), Expect = 0.080
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 10/133 (7%)
Query: 80 TRQCNYKCGFCFH------TAKTSFVLPLEEAKRGLLLLKEAGMEKINFSGGEPFLQDRG 133
T +CN +C +C T K + + E L +KE G++KI +GGEP + R
Sbjct: 77 TEKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKE-GIDKIRLTGGEPLI--RP 133
Query: 134 EYLGKLVRFCKVELRLPSVSIVSNGSLIRERWFQNYGEYLDILAISCDSFDEEVNVLIGR 193
+ + + + ++E L ++ + +NG + Q L + IS D+ I R
Sbjct: 134 DVVDIVAQLQRLE-GLRTIGVTTNGINLARLLPQLQKAGLSAINISLDTLVPAKFEFIVR 192
Query: 194 GQGKKNHVENLQK 206
+G +E + K
Sbjct: 193 RKGFHKVMEGIHK 205
>gi|116734668 molybdenum cofactor synthesis-step 1 protein isoform 4
[Homo sapiens]
Length = 385
Score = 35.4 bits (80), Expect = 0.080
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 10/133 (7%)
Query: 80 TRQCNYKCGFCFH------TAKTSFVLPLEEAKRGLLLLKEAGMEKINFSGGEPFLQDRG 133
T +CN +C +C T K + + E L +KE G++KI +GGEP + R
Sbjct: 77 TEKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVKE-GIDKIRLTGGEPLI--RP 133
Query: 134 EYLGKLVRFCKVELRLPSVSIVSNGSLIRERWFQNYGEYLDILAISCDSFDEEVNVLIGR 193
+ + + + ++E L ++ + +NG + Q L + IS D+ I R
Sbjct: 134 DVVDIVAQLQRLE-GLRTIGVTTNGINLARLLPQLQKAGLSAINISLDTLVPAKFEFIVR 192
Query: 194 GQGKKNHVENLQK 206
+G +E + K
Sbjct: 193 RKGFHKVMEGIHK 205
>gi|21361693 solute carrier family 6, member 15 isoform 2 [Homo
sapiens]
Length = 289
Score = 33.1 bits (74), Expect = 0.40
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 12/78 (15%)
Query: 221 NSVINRFNVEEDMTEQIKALNPVRWKVFQCLLIEGENCGEDALREAERFVIGDEEFERFL 280
NS + + +++D+TE +K L + E+ +DA + +E V G EE + +
Sbjct: 4 NSKVVKRELDDDVTESVKDL------------LSNEDAADDAFKTSELIVDGQEEKDTDV 51
Query: 281 ERHKEVSCLVPESNQKMK 298
E EV P N K++
Sbjct: 52 EEGSEVEDERPAWNSKLQ 69
>gi|33354281 solute carrier family 6, member 15 isoform 1 [Homo
sapiens]
Length = 730
Score = 33.1 bits (74), Expect = 0.40
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 12/78 (15%)
Query: 221 NSVINRFNVEEDMTEQIKALNPVRWKVFQCLLIEGENCGEDALREAERFVIGDEEFERFL 280
NS + + +++D+TE +K L + E+ +DA + +E V G EE + +
Sbjct: 4 NSKVVKRELDDDVTESVKDL------------LSNEDAADDAFKTSELIVDGQEEKDTDV 51
Query: 281 ERHKEVSCLVPESNQKMK 298
E EV P N K++
Sbjct: 52 EEGSEVEDERPAWNSKLQ 69
>gi|28274703 family with sequence similarity 9, member C [Homo
sapiens]
Length = 166
Score = 33.1 bits (74), Expect = 0.40
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 198 KNHVENLQK---LRRWCRDYRVAFKINSVINRFNVEEDMTEQIKALNPVRWKVFQ 249
KN ++N+ + L+R RDYR++ K+ +V+ F +E E+ + K+FQ
Sbjct: 96 KNRIKNVLRTTQLKRQKRDYRISLKLPNVLEEFITDEQKDEEGDGEKEEQIKIFQ 150
>gi|33188443 microfilament and actin filament cross-linker protein
isoform b [Homo sapiens]
Length = 5938
Score = 32.3 bits (72), Expect = 0.68
Identities = 37/167 (22%), Positives = 68/167 (40%), Gaps = 15/167 (8%)
Query: 175 ILAISCDSFDEEVNVLIGRG-QGKKNHVENLQKLRRWCRDYRV------AFKINSVINRF 227
+ + S E+V V + G Q KK+ +L++ C+D R A + S+IN
Sbjct: 1254 LFQVENQSAQEKVKVRVSDGEQAKKSREISLKEFG--CKDQRKPRMSSDAKEFISIINPH 1311
Query: 228 NVEEDMTEQIKALNPVRWKVFQCLLIEGENCGEDALREAERFVIGDEEFERFLERHKEVS 287
N++ Q+ +P F+ + N G D E E+ V + E + S
Sbjct: 1312 NLKGKSLGQVSLTHPYSECDFKLKEVARNNMGNDTNEEQEKAV---TKIEIISHMKQSTS 1368
Query: 288 CLVPESNQKMKDSYLILDEYMRFLNCRKGRKDPSKSILDVGVEEAIK 334
CL E ++ + ++ ++ C K PS+ +L + +K
Sbjct: 1369 CLDSEEIRENQGEVIL---EVQETYCETSGKLPSEQVLQQPMNARVK 1412
>gi|68348716 AF4/FMR2 family, member 3 isoform 2 [Homo sapiens]
Length = 1251
Score = 31.2 bits (69), Expect = 1.5
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 66 PPLPTTPTS-VNYHF---TRQCNYKCGFCFHTAKTSFVLPLEEAKRGLLLLKEAG 116
P +P TP + ++ HF +R N C T T +P++++KRG + ++AG
Sbjct: 123 PGVPQTPVNKIDEHFVADSRAQNQPSSICSTTTSTPAAVPVQQSKRGTMGWQKAG 177
>gi|68348714 AF4/FMR2 family, member 3 isoform 1 [Homo sapiens]
Length = 1226
Score = 31.2 bits (69), Expect = 1.5
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 66 PPLPTTPTS-VNYHF---TRQCNYKCGFCFHTAKTSFVLPLEEAKRGLLLLKEAG 116
P +P TP + ++ HF +R N C T T +P++++KRG + ++AG
Sbjct: 98 PGVPQTPVNKIDEHFVADSRAQNQPSSICSTTTSTPAAVPVQQSKRGTMGWQKAG 152
>gi|62750354 matrin 3 [Homo sapiens]
Length = 847
Score = 29.3 bits (64), Expect = 5.7
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 9/85 (10%)
Query: 254 EGENCGEDALREAERFVIGDEEFERFLERHKEVSCLVPESNQKMKDSYLILDEYMRFLNC 313
E E E+ ++ E G E E + +K+ S + + KD Y I DEY
Sbjct: 726 ENEAALENGIKNEENTEPGAESSENADDPNKDTSENADGQSDENKDDYTIPDEY------ 779
Query: 314 RKGRKDPSKSILDVGVEEAIKFSGF 338
R P + + VG++ I +GF
Sbjct: 780 ---RIGPYQPNVPVGIDYVIPKTGF 801
>gi|21626466 matrin 3 [Homo sapiens]
Length = 847
Score = 29.3 bits (64), Expect = 5.7
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 9/85 (10%)
Query: 254 EGENCGEDALREAERFVIGDEEFERFLERHKEVSCLVPESNQKMKDSYLILDEYMRFLNC 313
E E E+ ++ E G E E + +K+ S + + KD Y I DEY
Sbjct: 726 ENEAALENGIKNEENTEPGAESSENADDPNKDTSENADGQSDENKDDYTIPDEY------ 779
Query: 314 RKGRKDPSKSILDVGVEEAIKFSGF 338
R P + + VG++ I +GF
Sbjct: 780 ---RIGPYQPNVPVGIDYVIPKTGF 801
>gi|58331202 RAP1A, member of RAS oncogene family [Homo sapiens]
Length = 184
Score = 28.9 bits (63), Expect = 7.5
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 19/80 (23%)
Query: 180 CDSFDEEVNVLIGRGQGKKNHVENLQKLRRWCRDYRVAFKINSVINRFNVEE---DMTEQ 236
CD DE V +G+ QG +NL R+WC AF +S ++ NV E D+ Q
Sbjct: 118 CDLEDERV---VGKEQG-----QNLA--RQWCN---CAFLESSAKSKINVNEIFYDLVRQ 164
Query: 237 IKALNPV---RWKVFQCLLI 253
I PV + K CLL+
Sbjct: 165 INRKTPVEKKKPKKKSCLLL 184
>gi|4506413 RAP1A, member of RAS oncogene family [Homo sapiens]
Length = 184
Score = 28.9 bits (63), Expect = 7.5
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 19/80 (23%)
Query: 180 CDSFDEEVNVLIGRGQGKKNHVENLQKLRRWCRDYRVAFKINSVINRFNVEE---DMTEQ 236
CD DE V +G+ QG +NL R+WC AF +S ++ NV E D+ Q
Sbjct: 118 CDLEDERV---VGKEQG-----QNLA--RQWCN---CAFLESSAKSKINVNEIFYDLVRQ 164
Query: 237 IKALNPV---RWKVFQCLLI 253
I PV + K CLL+
Sbjct: 165 INRKTPVEKKKPKKKSCLLL 184
>gi|148727288 low density lipoprotein receptor-related protein 6 [Homo
sapiens]
Length = 1613
Score = 28.9 bits (63), Expect = 7.5
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 307 YMRFLNCRKGRKDPSKSILDVGVEEAIKFSGFDEKMFL---KRGGKYIWSKADLK 358
YM F N ++ ++ LD E + FSG + + L R GK W+ +DL+
Sbjct: 1070 YMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALALDSRLGKLFWADSDLR 1124
>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2
[Homo sapiens]
Length = 8749
Score = 28.9 bits (63), Expect = 7.5
Identities = 27/127 (21%), Positives = 53/127 (41%), Gaps = 21/127 (16%)
Query: 97 SFVLPLEEAKRGLLLLKEAGMEKINFSGGEPFLQDRGEYLGKLVRFCKVELRLPSVSIVS 156
+FVL LE+ + L +L++ + + G P + + ++ L + + +
Sbjct: 5185 TFVLELEQQQSALGMLRQQTLSMLQ-DGAAPTPGEEPPLMQEITAMQDRCLNMQE-KVKT 5242
Query: 157 NGSLIRER----------------WFQNYGEYLDILAISCDSFDEEVNVLIGRGQGKKNH 200
NG L+++ W Q EYL I D+ EE+ +L+ NH
Sbjct: 5243 NGKLVKQELKDREMVETQINSVKCWVQETKEYLGNPTIEIDAQLEELQILLTEA---TNH 5299
Query: 201 VENLQKL 207
+N++K+
Sbjct: 5300 RQNIEKM 5306
>gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1
[Homo sapiens]
Length = 8797
Score = 28.9 bits (63), Expect = 7.5
Identities = 27/127 (21%), Positives = 53/127 (41%), Gaps = 21/127 (16%)
Query: 97 SFVLPLEEAKRGLLLLKEAGMEKINFSGGEPFLQDRGEYLGKLVRFCKVELRLPSVSIVS 156
+FVL LE+ + L +L++ + + G P + + ++ L + + +
Sbjct: 5256 TFVLELEQQQSALGMLRQQTLSMLQ-DGAAPTPGEEPPLMQEITAMQDRCLNMQE-KVKT 5313
Query: 157 NGSLIRER----------------WFQNYGEYLDILAISCDSFDEEVNVLIGRGQGKKNH 200
NG L+++ W Q EYL I D+ EE+ +L+ NH
Sbjct: 5314 NGKLVKQELKDREMVETQINSVKCWVQETKEYLGNPTIEIDAQLEELQILLTEA---TNH 5370
Query: 201 VENLQKL 207
+N++K+
Sbjct: 5371 RQNIEKM 5377
>gi|239753557 PREDICTED: zinc finger protein 852 [Homo sapiens]
Length = 530
Score = 28.5 bits (62), Expect = 9.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 57 DETKEEEEDPPLPTTPTSVNYHFTRQCNYKCGFC 90
+E KE EE PPL ++P Q +Y+C C
Sbjct: 131 EEYKEVEEHPPLSSSPVEHEGVLKGQKSYRCDEC 164
>gi|169165837 PREDICTED: zinc finger protein 852 [Homo sapiens]
Length = 496
Score = 28.5 bits (62), Expect = 9.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 57 DETKEEEEDPPLPTTPTSVNYHFTRQCNYKCGFC 90
+E KE EE PPL ++P Q +Y+C C
Sbjct: 132 EEYKEVEEHPPLSSSPVEHEGVLKGQKSYRCDEC 165
>gi|239742001 PREDICTED: zinc finger protein 852 [Homo sapiens]
Length = 530
Score = 28.5 bits (62), Expect = 9.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 57 DETKEEEEDPPLPTTPTSVNYHFTRQCNYKCGFC 90
+E KE EE PPL ++P Q +Y+C C
Sbjct: 131 EEYKEVEEHPPLSSSPVEHEGVLKGQKSYRCDEC 164
>gi|48255891 protein kinase C substrate 80K-H isoform 2 [Homo
sapiens]
Length = 525
Score = 28.5 bits (62), Expect = 9.8
Identities = 10/18 (55%), Positives = 15/18 (83%)
Query: 56 PDETKEEEEDPPLPTTPT 73
PD T+ +EE PP+P++PT
Sbjct: 295 PDLTEPKEEQPPVPSSPT 312
>gi|48255889 protein kinase C substrate 80K-H isoform 1 [Homo
sapiens]
Length = 528
Score = 28.5 bits (62), Expect = 9.8
Identities = 10/18 (55%), Positives = 15/18 (83%)
Query: 56 PDETKEEEEDPPLPTTPT 73
PD T+ +EE PP+P++PT
Sbjct: 295 PDLTEPKEEQPPVPSSPT 312
>gi|31621309 leucine rich repeat containing 6 [Homo sapiens]
Length = 466
Score = 28.5 bits (62), Expect = 9.8
Identities = 8/29 (27%), Positives = 19/29 (65%)
Query: 198 KNHVENLQKLRRWCRDYRVAFKINSVINR 226
+ +E L+ + +WCRD ++ + N++I +
Sbjct: 30 QQEIERLEHIDKWCRDLKILYLQNNLIGK 58
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.139 0.434
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,693,770
Number of Sequences: 37866
Number of extensions: 676817
Number of successful extensions: 1919
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1897
Number of HSP's gapped (non-prelim): 33
length of query: 361
length of database: 18,247,518
effective HSP length: 104
effective length of query: 257
effective length of database: 14,309,454
effective search space: 3677529678
effective search space used: 3677529678
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.