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Search of human proteins with 19745184
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|19745184 cAMP responsive element binding protein 1 isoform B
[Homo sapiens]
(341 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|19745184 cAMP responsive element binding protein 1 isoform B ... 655 0.0
gi|4758054 cAMP responsive element binding protein 1 isoform A [... 617 e-177
gi|34335222 cAMP responsive element modulator isoform u [Homo sa... 338 4e-93
gi|34335186 cAMP responsive element modulator isoform a [Homo sa... 316 2e-86
gi|34335214 cAMP responsive element modulator isoform o [Homo sa... 312 2e-85
gi|34335210 cAMP responsive element modulator isoform m [Homo sa... 312 3e-85
gi|4885073 activating transcription factor 1 [Homo sapiens] 311 4e-85
gi|34335226 cAMP responsive element modulator isoform s [Homo sa... 243 2e-64
gi|34335224 cAMP responsive element modulator isoform t [Homo sa... 225 4e-59
gi|34335228 cAMP responsive element modulator isoform v [Homo sa... 203 2e-52
gi|34335216 cAMP responsive element modulator isoform p [Homo sa... 199 2e-51
gi|34335212 cAMP responsive element modulator isoform n [Homo sa... 199 3e-51
gi|34335188 cAMP responsive element modulator isoform d [Homo sa... 155 6e-38
gi|34335196 cAMP responsive element modulator isoform h [Homo sa... 152 5e-37
gi|34335200 cAMP responsive element modulator isoform j [Homo sa... 151 7e-37
gi|34335194 cAMP responsive element modulator isoform g [Homo sa... 151 7e-37
gi|34335198 cAMP responsive element modulator isoform i [Homo sa... 143 2e-34
gi|34335220 cAMP responsive element modulator isoform r [Homo sa... 143 2e-34
gi|34335192 cAMP responsive element modulator isoform f [Homo sa... 132 3e-31
gi|34335202 cAMP responsive element modulator isoform k [Homo sa... 129 3e-30
gi|34335190 cAMP responsive element modulator isoform e [Homo sa... 129 4e-30
gi|34335204 cAMP responsive element modulator isoform l [Homo sa... 121 1e-27
gi|34335218 cAMP responsive element modulator isoform q [Homo sa... 121 1e-27
gi|34335206 cAMP responsive element modulator isoform b [Homo sa... 117 2e-26
gi|16418355 cAMP responsive element binding protein 3-like 1 [Ho... 62 6e-10
gi|209954788 activating transcription factor 6 beta isoform b [H... 61 2e-09
gi|20631977 activating transcription factor 6 beta isoform a [Ho... 61 2e-09
gi|56550067 cAMP responsive element binding protein 3-like 2 [Ho... 53 4e-07
gi|18702325 cAMP responsive element binding protein 3-like 4 [Ho... 50 4e-06
gi|56786157 activating transcription factor 6 [Homo sapiens] 47 3e-05
>gi|19745184 cAMP responsive element binding protein 1 isoform B
[Homo sapiens]
Length = 341
Score = 655 bits (1689), Expect = 0.0
Identities = 341/341 (100%), Positives = 341/341 (100%)
Query: 1 MTMESGAENQQSGDAAVTEAENQQMTVQAQPQIATLAQVSMPAAHATSSAPTVTLVQLPN 60
MTMESGAENQQSGDAAVTEAENQQMTVQAQPQIATLAQVSMPAAHATSSAPTVTLVQLPN
Sbjct: 1 MTMESGAENQQSGDAAVTEAENQQMTVQAQPQIATLAQVSMPAAHATSSAPTVTLVQLPN 60
Query: 61 GQTVQVHGVIQAAQPSVIQSPQVQTVQSSCKDLKRLFSGTQISTIAESEDSQESVDSVTD 120
GQTVQVHGVIQAAQPSVIQSPQVQTVQSSCKDLKRLFSGTQISTIAESEDSQESVDSVTD
Sbjct: 61 GQTVQVHGVIQAAQPSVIQSPQVQTVQSSCKDLKRLFSGTQISTIAESEDSQESVDSVTD 120
Query: 121 SQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSG 180
SQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSG
Sbjct: 121 SQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSG 180
Query: 181 QYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTTILQYAQTTDGQQILVPSNQV 240
QYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTTILQYAQTTDGQQILVPSNQV
Sbjct: 181 QYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTTILQYAQTTDGQQILVPSNQV 240
Query: 241 VVQAASGDVQTYQIRTAPTSTIAPGVVMASSPALPTQPAEEAARKREVRLMKNREAAREC 300
VVQAASGDVQTYQIRTAPTSTIAPGVVMASSPALPTQPAEEAARKREVRLMKNREAAREC
Sbjct: 241 VVQAASGDVQTYQIRTAPTSTIAPGVVMASSPALPTQPAEEAARKREVRLMKNREAAREC 300
Query: 301 RRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD 341
RRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD
Sbjct: 301 RRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD 341
>gi|4758054 cAMP responsive element binding protein 1 isoform A
[Homo sapiens]
Length = 327
Score = 617 bits (1592), Expect = e-177
Identities = 327/341 (95%), Positives = 327/341 (95%), Gaps = 14/341 (4%)
Query: 1 MTMESGAENQQSGDAAVTEAENQQMTVQAQPQIATLAQVSMPAAHATSSAPTVTLVQLPN 60
MTMESGAENQQSGDAAVTEAENQQMTVQAQPQIATLAQVSMPAAHATSSAPTVTLVQLPN
Sbjct: 1 MTMESGAENQQSGDAAVTEAENQQMTVQAQPQIATLAQVSMPAAHATSSAPTVTLVQLPN 60
Query: 61 GQTVQVHGVIQAAQPSVIQSPQVQTVQSSCKDLKRLFSGTQISTIAESEDSQESVDSVTD 120
GQTVQVHGVIQAAQPSVIQSPQVQTVQ ISTIAESEDSQESVDSVTD
Sbjct: 61 GQTVQVHGVIQAAQPSVIQSPQVQTVQ--------------ISTIAESEDSQESVDSVTD 106
Query: 121 SQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSG 180
SQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSG
Sbjct: 107 SQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSG 166
Query: 181 QYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTTILQYAQTTDGQQILVPSNQV 240
QYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTTILQYAQTTDGQQILVPSNQV
Sbjct: 167 QYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTTILQYAQTTDGQQILVPSNQV 226
Query: 241 VVQAASGDVQTYQIRTAPTSTIAPGVVMASSPALPTQPAEEAARKREVRLMKNREAAREC 300
VVQAASGDVQTYQIRTAPTSTIAPGVVMASSPALPTQPAEEAARKREVRLMKNREAAREC
Sbjct: 227 VVQAASGDVQTYQIRTAPTSTIAPGVVMASSPALPTQPAEEAARKREVRLMKNREAAREC 286
Query: 301 RRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD 341
RRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD
Sbjct: 287 RRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD 327
>gi|34335222 cAMP responsive element modulator isoform u [Homo
sapiens]
Length = 299
Score = 338 bits (867), Expect = 4e-93
Identities = 185/263 (70%), Positives = 212/263 (80%), Gaps = 13/263 (4%)
Query: 82 QVQTVQSSCKDLKRLFSGTQISTIAESEDSQESVDSVTDSQKRREILSRRPSYRKILNDL 141
Q QT Q+S L Q++ IAE+++S ES + V DS KRREILSRRPSYRKILN+L
Sbjct: 43 QTQTGQNSIPAL------AQVAAIAETDESAES-EGVIDSHKRREILSRRPSYRKILNEL 95
Query: 142 SSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSGQYIAITQGGAIQLANNGTDGV 201
SSD PGVP+IEEE+SEEE + P+I T+ VPT IYQTS+GQYIAI QGG IQ++N G+DGV
Sbjct: 96 SSDVPGVPKIEEERSEEEGTPPSIATMAVPTSIYQTSTGQYIAIAQGGTIQISNPGSDGV 155
Query: 202 QGLQTLTMTNAAATQPGTTILQY-AQTTDG-QQILVPSNQVVVQAASGDVQTYQIRTAPT 259
QGLQ LTMTN+ A PG TI+QY AQ+ DG QQ VP +QVVVQAA+GD+ TYQIR APT
Sbjct: 156 QGLQALTMTNSGAPPPGATIVQYAAQSADGTQQFFVPGSQVVVQAATGDMPTYQIR-APT 214
Query: 260 STIAPGVVMASSPA---LPTQPAEEAARKREVRLMKNREAARECRRKKKEYVKCLENRVA 316
+ + GVVMA+SP P Q AEEA RKRE+RLMKNREAARECRRKKKEYVKCLENRVA
Sbjct: 215 AALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAARECRRKKKEYVKCLENRVA 274
Query: 317 VLENQNKTLIEELKALKDLYCHK 339
VLENQNKTLIEELKALKDLYCHK
Sbjct: 275 VLENQNKTLIEELKALKDLYCHK 297
>gi|34335186 cAMP responsive element modulator isoform a [Homo
sapiens]
Length = 300
Score = 316 bits (809), Expect = 2e-86
Identities = 175/265 (66%), Positives = 208/265 (78%), Gaps = 13/265 (4%)
Query: 82 QVQTVQSSCKDLKRLFSGTQISTIAESEDSQESVDSVTDSQKRREILSRRPSYRKILNDL 141
Q QT Q+S L Q++ IAE+++S ES + V DS KRREILSRRPSYRKILN+L
Sbjct: 43 QTQTGQNSIPAL------AQVAAIAETDESAES-EGVIDSHKRREILSRRPSYRKILNEL 95
Query: 142 SSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSGQYIAITQGGAIQLANNGTDGV 201
SSD PGVP+IEEE+SEEE + P+I T+ VPT IYQTS+GQYIAI QGG IQ++N G+DGV
Sbjct: 96 SSDVPGVPKIEEERSEEEGTPPSIATMAVPTSIYQTSTGQYIAIAQGGTIQISNPGSDGV 155
Query: 202 QGLQTLTMTNAAATQPGTTILQY-AQTTDG-QQILVPSNQVVVQAASGDVQTYQIRTAPT 259
QGLQ LTMTN+ A PG TI+QY AQ+ DG QQ VP +QVVVQAA+GD+ TYQIR APT
Sbjct: 156 QGLQALTMTNSGAPPPGATIVQYAAQSADGTQQFFVPGSQVVVQAATGDMPTYQIR-APT 214
Query: 260 STIAPGVVMASSPA---LPTQPAEEAARKREVRLMKNREAARECRRKKKEYVKCLENRVA 316
+ + GVVMA+SP P Q AEEA RKRE+RLMKNREAA+ECRR+KKEYVKCLE+RVA
Sbjct: 215 AALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVA 274
Query: 317 VLENQNKTLIEELKALKDLYCHKSD 341
VLE QNK LIEEL+ LKD+ K+D
Sbjct: 275 VLEVQNKKLIEELETLKDICSPKTD 299
>gi|34335214 cAMP responsive element modulator isoform o [Homo
sapiens]
Length = 270
Score = 312 bits (800), Expect = 2e-85
Identities = 168/246 (68%), Positives = 201/246 (81%), Gaps = 7/246 (2%)
Query: 101 QISTIAESEDSQESVDSVTDSQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEET 160
+++ IAE+++S ES + V DS KRREILSRRPSYRKILN+LSSD PGVP+IEEE+SEEE
Sbjct: 26 KVAAIAETDESAES-EGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEG 84
Query: 161 SAPAITTVTVPTPIYQTSSGQYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTT 220
+ P+I T+ VPT IYQTS+GQYIAI QGG IQ++N G+DGVQGLQ LTMTN+ A PG T
Sbjct: 85 TPPSIATMAVPTSIYQTSTGQYIAIAQGGTIQISNPGSDGVQGLQALTMTNSGAPPPGAT 144
Query: 221 ILQY-AQTTDG-QQILVPSNQVVVQAASGDVQTYQIRTAPTSTIAPGVVMASSPA---LP 275
I+QY AQ+ DG QQ VP +QVVVQAA+GD+ TYQIR APT+ + GVVMA+SP P
Sbjct: 145 IVQYAAQSADGTQQFFVPGSQVVVQAATGDMPTYQIR-APTAALPQGVVMAASPGSLHSP 203
Query: 276 TQPAEEAARKREVRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDL 335
Q AEEA RKRE+RLMKNREAA+ECRR+KKEYVKCLE+RVAVLE QNK LIEEL+ LKD+
Sbjct: 204 QQLAEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDI 263
Query: 336 YCHKSD 341
K+D
Sbjct: 264 CSPKTD 269
>gi|34335210 cAMP responsive element modulator isoform m [Homo
sapiens]
Length = 245
Score = 312 bits (799), Expect = 3e-85
Identities = 168/245 (68%), Positives = 200/245 (81%), Gaps = 7/245 (2%)
Query: 102 ISTIAESEDSQESVDSVTDSQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEETS 161
++ IAE+++S ES + V DS KRREILSRRPSYRKILN+LSSD PGVP+IEEE+SEEE +
Sbjct: 2 VAAIAETDESAES-EGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGT 60
Query: 162 APAITTVTVPTPIYQTSSGQYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTTI 221
P+I T+ VPT IYQTS+GQYIAI QGG IQ++N G+DGVQGLQ LTMTN+ A PG TI
Sbjct: 61 PPSIATMAVPTSIYQTSTGQYIAIAQGGTIQISNPGSDGVQGLQALTMTNSGAPPPGATI 120
Query: 222 LQY-AQTTDG-QQILVPSNQVVVQAASGDVQTYQIRTAPTSTIAPGVVMASSPA---LPT 276
+QY AQ+ DG QQ VP +QVVVQAA+GD+ TYQIR APT+ + GVVMA+SP P
Sbjct: 121 VQYAAQSADGTQQFFVPGSQVVVQAATGDMPTYQIR-APTAALPQGVVMAASPGSLHSPQ 179
Query: 277 QPAEEAARKREVRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLY 336
Q AEEA RKRE+RLMKNREAA+ECRR+KKEYVKCLE+RVAVLE QNK LIEEL+ LKD+
Sbjct: 180 QLAEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDIC 239
Query: 337 CHKSD 341
K+D
Sbjct: 240 SPKTD 244
>gi|4885073 activating transcription factor 1 [Homo sapiens]
Length = 271
Score = 311 bits (798), Expect = 4e-85
Identities = 165/243 (67%), Positives = 194/243 (79%), Gaps = 6/243 (2%)
Query: 101 QISTIAESEDSQESVDSVTDSQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEET 160
Q+S+++ESE+SQ+S DS+ SQK IL+RRPSYRKIL DLSS+ R + E
Sbjct: 31 QVSSLSESEESQDSSDSIGSSQKAHGILARRPSYRKILKDLSSEDT---RGRKGDGENSG 87
Query: 161 SAPAITTVTVPTPIYQTSSGQYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTT 220
+ A+T+++VPTPIYQTSSGQYIAI GA+QLA+ GTDGVQGLQTLTMTN+ +TQ GTT
Sbjct: 88 VSAAVTSMSVPTPIYQTSSGQYIAIAPNGALQLASPGTDGVQGLQTLTMTNSGSTQQGTT 147
Query: 221 ILQYAQTTDGQQILVPSNQVVVQAASGDVQTYQIRTAPTSTIAPGVVMASSPAL---PTQ 277
ILQYAQT+DGQQILVPSNQVVVQ ASGD+QTYQIRT P++T P V+ +SP T
Sbjct: 148 ILQYAQTSDGQQILVPSNQVVVQTASGDMQTYQIRTTPSATSLPQTVVMTSPVTLTSQTT 207
Query: 278 PAEEAARKREVRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYC 337
++ KRE+RLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELK LKDLY
Sbjct: 208 KTDDPQLKREIRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLYS 267
Query: 338 HKS 340
+KS
Sbjct: 268 NKS 270
>gi|34335226 cAMP responsive element modulator isoform s [Homo
sapiens]
Length = 248
Score = 243 bits (619), Expect = 2e-64
Identities = 147/261 (56%), Positives = 169/261 (64%), Gaps = 60/261 (22%)
Query: 82 QVQTVQSSCKDLKRLFSGTQISTIAESEDSQESVDSVTDSQKRREILSRRPSYRKILNDL 141
Q QT Q+S L Q++ IAE+++S ES + V DS KRREILSRRPSYRKILN+L
Sbjct: 43 QTQTGQNSIPAL------AQVAAIAETDESAES-EGVIDSHKRREILSRRPSYRKILNEL 95
Query: 142 SSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSGQYIAITQGGAIQLANNGTDGV 201
SSD PGVP+IEEE+SEEE + P+I T+ VPT IYQTS+GQY T+
Sbjct: 96 SSDVPGVPKIEEERSEEEGTPPSIATMAVPTSIYQTSTGQYNEETE-------------- 141
Query: 202 QGLQTLTMTNAAATQPGTTILQYAQTTDGQQILVPSNQVVVQAASGDVQTYQIRTAPTST 261
L PS+ AA+GD+ TYQIR APT+
Sbjct: 142 --------------------------------LAPSHMA---AATGDMPTYQIR-APTAA 165
Query: 262 IAPGVVMASSPAL---PTQPAEEAARKREVRLMKNREAARECRRKKKEYVKCLENRVAVL 318
+ GVVMA+SP P Q AEEA RKRE+RLMKNREAARECRRKKKEYVKCLENRVAVL
Sbjct: 166 LPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAARECRRKKKEYVKCLENRVAVL 225
Query: 319 ENQNKTLIEELKALKDLYCHK 339
ENQNKTLIEELKALKDLYCHK
Sbjct: 226 ENQNKTLIEELKALKDLYCHK 246
>gi|34335224 cAMP responsive element modulator isoform t [Homo
sapiens]
Length = 236
Score = 225 bits (574), Expect = 4e-59
Identities = 140/261 (53%), Positives = 160/261 (61%), Gaps = 72/261 (27%)
Query: 82 QVQTVQSSCKDLKRLFSGTQISTIAESEDSQESVDSVTDSQKRREILSRRPSYRKILNDL 141
Q QT Q+S L Q++ IAE+++S ES + V DS KRREILSRRPSYRKILN+L
Sbjct: 43 QTQTGQNSIPAL------AQVAAIAETDESAES-EGVIDSHKRREILSRRPSYRKILNEL 95
Query: 142 SSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSGQYIAITQGGAIQLANNGTDGV 201
SSD PGVP+IEEE+SEEE + P+I T+ VPT IY
Sbjct: 96 SSDVPGVPKIEEERSEEEGTPPSIATMAVPTSIY-------------------------- 129
Query: 202 QGLQTLTMTNAAATQPGTTILQYAQTTDGQQILVPSNQVVVQAASGDVQTYQIRTAPTST 261
QT+ GQ A+GD+ TYQIR APT+
Sbjct: 130 ------------------------QTSTGQY-----------TATGDMPTYQIR-APTAA 153
Query: 262 IAPGVVMASSPAL---PTQPAEEAARKREVRLMKNREAARECRRKKKEYVKCLENRVAVL 318
+ GVVMA+SP P Q AEEA RKRE+RLMKNREAARECRRKKKEYVKCLENRVAVL
Sbjct: 154 LPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAARECRRKKKEYVKCLENRVAVL 213
Query: 319 ENQNKTLIEELKALKDLYCHK 339
ENQNKTLIEELKALKDLYCHK
Sbjct: 214 ENQNKTLIEELKALKDLYCHK 234
>gi|34335228 cAMP responsive element modulator isoform v [Homo
sapiens]
Length = 221
Score = 203 bits (516), Expect = 2e-52
Identities = 130/263 (49%), Positives = 156/263 (59%), Gaps = 72/263 (27%)
Query: 82 QVQTVQSSCKDLKRLFSGTQISTIAESEDSQESVDSVTDSQKRREILSRRPSYRKILNDL 141
Q QT Q+S L Q++ IAE+++S ES + V DS KRREILSRRPSYRKILN+L
Sbjct: 27 QTQTGQNSIPAL------AQVAAIAETDESAES-EGVIDSHKRREILSRRPSYRKILNEL 79
Query: 142 SSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSGQYIAITQGGAIQLANNGTDGV 201
SSD PGVP+IEEE+SEEE + P+I T+ VPT IY
Sbjct: 80 SSDVPGVPKIEEERSEEEGTPPSIATMAVPTSIY-------------------------- 113
Query: 202 QGLQTLTMTNAAATQPGTTILQYAQTTDGQQILVPSNQVVVQAASGDVQTYQIRTAPTST 261
QT+ GQ A+GD+ TYQIR APT+
Sbjct: 114 ------------------------QTSTGQY-----------TATGDMPTYQIR-APTAA 137
Query: 262 IAPGVVMASSPAL---PTQPAEEAARKREVRLMKNREAARECRRKKKEYVKCLENRVAVL 318
+ GVVMA+SP P Q AEEA RKRE+RLMKNREAA+ECRR+KKEYVKCLE+RVAVL
Sbjct: 138 LPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVL 197
Query: 319 ENQNKTLIEELKALKDLYCHKSD 341
E QNK LIEEL+ LKD+ K+D
Sbjct: 198 EVQNKKLIEELETLKDICSPKTD 220
>gi|34335216 cAMP responsive element modulator isoform p [Homo
sapiens]
Length = 207
Score = 199 bits (507), Expect = 2e-51
Identities = 123/244 (50%), Positives = 149/244 (61%), Gaps = 66/244 (27%)
Query: 101 QISTIAESEDSQESVDSVTDSQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEET 160
+++ IAE+++S ES + V DS KRREILSRRPSYRKILN+LSSD PGVP+IEEE+SEEE
Sbjct: 26 KVAAIAETDESAES-EGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEG 84
Query: 161 SAPAITTVTVPTPIYQTSSGQYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTT 220
+ P+I T+ VPT IY
Sbjct: 85 TPPSIATMAVPTSIY--------------------------------------------- 99
Query: 221 ILQYAQTTDGQQILVPSNQVVVQAASGDVQTYQIRTAPTSTIAPGVVMASSPAL---PTQ 277
QT+ GQ A+GD+ TYQIR APT+ + GVVMA+SP P Q
Sbjct: 100 -----QTSTGQY-----------TATGDMPTYQIR-APTAALPQGVVMAASPGSLHSPQQ 142
Query: 278 PAEEAARKREVRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYC 337
AEEA RKRE+RLMKNREAA+ECRR+KKEYVKCLE+RVAVLE QNK LIEEL+ LKD+
Sbjct: 143 LAEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICS 202
Query: 338 HKSD 341
K+D
Sbjct: 203 PKTD 206
>gi|34335212 cAMP responsive element modulator isoform n [Homo
sapiens]
Length = 182
Score = 199 bits (506), Expect = 3e-51
Identities = 123/243 (50%), Positives = 148/243 (60%), Gaps = 66/243 (27%)
Query: 102 ISTIAESEDSQESVDSVTDSQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEETS 161
++ IAE+++S ES + V DS KRREILSRRPSYRKILN+LSSD PGVP+IEEE+SEEE +
Sbjct: 2 VAAIAETDESAES-EGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGT 60
Query: 162 APAITTVTVPTPIYQTSSGQYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTTI 221
P+I T+ VPT IY
Sbjct: 61 PPSIATMAVPTSIY---------------------------------------------- 74
Query: 222 LQYAQTTDGQQILVPSNQVVVQAASGDVQTYQIRTAPTSTIAPGVVMASSPAL---PTQP 278
QT+ GQ A+GD+ TYQIR APT+ + GVVMA+SP P Q
Sbjct: 75 ----QTSTGQY-----------TATGDMPTYQIR-APTAALPQGVVMAASPGSLHSPQQL 118
Query: 279 AEEAARKREVRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCH 338
AEEA RKRE+RLMKNREAA+ECRR+KKEYVKCLE+RVAVLE QNK LIEEL+ LKD+
Sbjct: 119 AEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSP 178
Query: 339 KSD 341
K+D
Sbjct: 179 KTD 181
>gi|34335188 cAMP responsive element modulator isoform d [Homo
sapiens]
Length = 120
Score = 155 bits (391), Expect = 6e-38
Identities = 85/115 (73%), Positives = 93/115 (80%), Gaps = 7/115 (6%)
Query: 228 TDGQQILVPSNQVVVQAASGDVQTYQIRTAPTSTIAPGVVMASSPAL---PTQPAEEAAR 284
TD + L PS+ AA+GD+ TYQIR APT+ + GVVMA+SP P Q AEEA R
Sbjct: 8 TDEETELAPSHMA---AATGDMPTYQIR-APTAALPQGVVMAASPGSLHSPQQLAEEATR 63
Query: 285 KREVRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHK 339
KRE+RLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHK
Sbjct: 64 KRELRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHK 118
>gi|34335196 cAMP responsive element modulator isoform h [Homo
sapiens]
Length = 112
Score = 152 bits (383), Expect = 5e-37
Identities = 80/101 (79%), Positives = 87/101 (86%), Gaps = 4/101 (3%)
Query: 242 VQAASGDVQTYQIRTAPTSTIAPGVVMASSPAL---PTQPAEEAARKREVRLMKNREAAR 298
+ AA+GD+ TYQIR APT+ + GVVMA+SP P Q AEEA RKRE+RLMKNREAAR
Sbjct: 11 LSAATGDMPTYQIR-APTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAR 69
Query: 299 ECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHK 339
ECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHK
Sbjct: 70 ECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHK 110
>gi|34335200 cAMP responsive element modulator isoform j [Homo
sapiens]
Length = 102
Score = 151 bits (382), Expect = 7e-37
Identities = 80/99 (80%), Positives = 86/99 (86%), Gaps = 4/99 (4%)
Query: 244 AASGDVQTYQIRTAPTSTIAPGVVMASSPAL---PTQPAEEAARKREVRLMKNREAAREC 300
AA+GD+ TYQIR APT+ + GVVMA+SP P Q AEEA RKRE+RLMKNREAAREC
Sbjct: 3 AATGDMPTYQIR-APTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAREC 61
Query: 301 RRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHK 339
RRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHK
Sbjct: 62 RRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHK 100
>gi|34335194 cAMP responsive element modulator isoform g [Homo
sapiens]
Length = 108
Score = 151 bits (382), Expect = 7e-37
Identities = 80/99 (80%), Positives = 86/99 (86%), Gaps = 4/99 (4%)
Query: 244 AASGDVQTYQIRTAPTSTIAPGVVMASSPAL---PTQPAEEAARKREVRLMKNREAAREC 300
AA+GD+ TYQIR APT+ + GVVMA+SP P Q AEEA RKRE+RLMKNREAAREC
Sbjct: 9 AATGDMPTYQIR-APTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAREC 67
Query: 301 RRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHK 339
RRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHK
Sbjct: 68 RRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHK 106
>gi|34335198 cAMP responsive element modulator isoform i [Homo
sapiens]
Length = 95
Score = 143 bits (361), Expect = 2e-34
Identities = 76/92 (82%), Positives = 80/92 (86%), Gaps = 4/92 (4%)
Query: 251 TYQIRTAPTSTIAPGVVMASSPAL---PTQPAEEAARKREVRLMKNREAARECRRKKKEY 307
TYQIR APT+ + GVVMA+SP P Q AEEA RKRE+RLMKNREAARECRRKKKEY
Sbjct: 3 TYQIR-APTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAARECRRKKKEY 61
Query: 308 VKCLENRVAVLENQNKTLIEELKALKDLYCHK 339
VKCLENRVAVLENQNKTLIEELKALKDLYCHK
Sbjct: 62 VKCLENRVAVLENQNKTLIEELKALKDLYCHK 93
>gi|34335220 cAMP responsive element modulator isoform r [Homo
sapiens]
Length = 95
Score = 143 bits (361), Expect = 2e-34
Identities = 76/92 (82%), Positives = 80/92 (86%), Gaps = 4/92 (4%)
Query: 251 TYQIRTAPTSTIAPGVVMASSPAL---PTQPAEEAARKREVRLMKNREAARECRRKKKEY 307
TYQIR APT+ + GVVMA+SP P Q AEEA RKRE+RLMKNREAARECRRKKKEY
Sbjct: 3 TYQIR-APTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAARECRRKKKEY 61
Query: 308 VKCLENRVAVLENQNKTLIEELKALKDLYCHK 339
VKCLENRVAVLENQNKTLIEELKALKDLYCHK
Sbjct: 62 VKCLENRVAVLENQNKTLIEELKALKDLYCHK 93
>gi|34335192 cAMP responsive element modulator isoform f [Homo
sapiens]
Length = 121
Score = 132 bits (333), Expect = 3e-31
Identities = 75/117 (64%), Positives = 89/117 (76%), Gaps = 7/117 (5%)
Query: 228 TDGQQILVPSNQVVVQAASGDVQTYQIRTAPTSTIAPGVVMASSPAL---PTQPAEEAAR 284
TD + L PS+ AA+GD+ TYQIR APT+ + GVVMA+SP P Q AEEA R
Sbjct: 8 TDEETELAPSHMA---AATGDMPTYQIR-APTAALPQGVVMAASPGSLHSPQQLAEEATR 63
Query: 285 KREVRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD 341
KRE+RLMKNREAA+ECRR+KKEYVKCLE+RVAVLE QNK LIEEL+ LKD+ K+D
Sbjct: 64 KRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTD 120
>gi|34335202 cAMP responsive element modulator isoform k [Homo
sapiens]
Length = 113
Score = 129 bits (325), Expect = 3e-30
Identities = 70/103 (67%), Positives = 83/103 (80%), Gaps = 4/103 (3%)
Query: 242 VQAASGDVQTYQIRTAPTSTIAPGVVMASSPAL---PTQPAEEAARKREVRLMKNREAAR 298
+ AA+GD+ TYQIR APT+ + GVVMA+SP P Q AEEA RKRE+RLMKNREAA+
Sbjct: 11 LSAATGDMPTYQIR-APTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAK 69
Query: 299 ECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD 341
ECRR+KKEYVKCLE+RVAVLE QNK LIEEL+ LKD+ K+D
Sbjct: 70 ECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTD 112
>gi|34335190 cAMP responsive element modulator isoform e [Homo
sapiens]
Length = 109
Score = 129 bits (324), Expect = 4e-30
Identities = 70/101 (69%), Positives = 82/101 (81%), Gaps = 4/101 (3%)
Query: 244 AASGDVQTYQIRTAPTSTIAPGVVMASSPAL---PTQPAEEAARKREVRLMKNREAAREC 300
AA+GD+ TYQIR APT+ + GVVMA+SP P Q AEEA RKRE+RLMKNREAA+EC
Sbjct: 9 AATGDMPTYQIR-APTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKEC 67
Query: 301 RRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD 341
RR+KKEYVKCLE+RVAVLE QNK LIEEL+ LKD+ K+D
Sbjct: 68 RRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKTD 108
>gi|34335204 cAMP responsive element modulator isoform l [Homo
sapiens]
Length = 96
Score = 121 bits (303), Expect = 1e-27
Identities = 66/94 (70%), Positives = 76/94 (80%), Gaps = 4/94 (4%)
Query: 251 TYQIRTAPTSTIAPGVVMASSPAL---PTQPAEEAARKREVRLMKNREAARECRRKKKEY 307
TYQIR APT+ + GVVMA+SP P Q AEEA RKRE+RLMKNREAA+ECRR+KKEY
Sbjct: 3 TYQIR-APTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECRRRKKEY 61
Query: 308 VKCLENRVAVLENQNKTLIEELKALKDLYCHKSD 341
VKCLE+RVAVLE QNK LIEEL+ LKD+ K+D
Sbjct: 62 VKCLESRVAVLEVQNKKLIEELETLKDICSPKTD 95
>gi|34335218 cAMP responsive element modulator isoform q [Homo
sapiens]
Length = 96
Score = 121 bits (303), Expect = 1e-27
Identities = 66/94 (70%), Positives = 76/94 (80%), Gaps = 4/94 (4%)
Query: 251 TYQIRTAPTSTIAPGVVMASSPAL---PTQPAEEAARKREVRLMKNREAARECRRKKKEY 307
TYQIR APT+ + GVVMA+SP P Q AEEA RKRE+RLMKNREAA+ECRR+KKEY
Sbjct: 3 TYQIR-APTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECRRRKKEY 61
Query: 308 VKCLENRVAVLENQNKTLIEELKALKDLYCHKSD 341
VKCLE+RVAVLE QNK LIEEL+ LKD+ K+D
Sbjct: 62 VKCLESRVAVLEVQNKKLIEELETLKDICSPKTD 95
>gi|34335206 cAMP responsive element modulator isoform b [Homo
sapiens]
Length = 137
Score = 117 bits (292), Expect = 2e-26
Identities = 63/101 (62%), Positives = 77/101 (76%), Gaps = 7/101 (6%)
Query: 82 QVQTVQSSCKDLKRLFSGTQISTIAESEDSQESVDSVTDSQKRREILSRRPSYRKILNDL 141
Q QT Q+S L Q++ IAE+++S ES + V DS KRREILSRRPSYRKILN+L
Sbjct: 27 QTQTGQNSIPAL------AQVAAIAETDESAES-EGVIDSHKRREILSRRPSYRKILNEL 79
Query: 142 SSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSGQY 182
SSD PGVP+IEEE+SEEE + P+I T+ VPT IYQTS+GQY
Sbjct: 80 SSDVPGVPKIEEERSEEEGTPPSIATMAVPTSIYQTSTGQY 120
>gi|16418355 cAMP responsive element binding protein 3-like 1 [Homo
sapiens]
Length = 519
Score = 62.4 bits (150), Expect = 6e-10
Identities = 67/218 (30%), Positives = 94/218 (43%), Gaps = 41/218 (18%)
Query: 161 SAPAITTVTVPTPIYQTSSGQYIAITQ---GGAIQLANNGTDGVQGLQTLTMTNAAATQ- 216
SA A TP+ S + I G QL + ++ Q L +T Q
Sbjct: 145 SAMAAAAAMATTPLLGLSPLSRLPIPHQAPGEMTQLPVIKAEPLEVNQFLKVTPEDLVQM 204
Query: 217 PGTTILQYAQTTDGQQI---LVPSNQVVVQAASGD-VQTYQIRTAP-------------- 258
P T + +DG Q L PS+ V A S + T + TAP
Sbjct: 205 PPTPPSSHGSDSDGSQSPRSLPPSSPVRPMARSSTAISTSPLLTAPHKLQGTSGPLLLTE 264
Query: 259 ---TSTIAPGVVMASSPALPTQPAEEAARKREVRLMKNREAARECRRKKKEYVKCLE--- 312
+ IA G + + LP AEE A KR R +KN+ +A+E RRKKKEYV+CLE
Sbjct: 265 EEKRTLIAEGYPIPTK--LPLTKAEEKALKRVRRKIKNKISAQESRRKKKEYVECLEKKV 322
Query: 313 -----------NRVAVLENQNKTLIEELKALKDLYCHK 339
+V LEN N+TL+++L+ L+ L +K
Sbjct: 323 ETFTSENNELWKKVETLENANRTLLQQLQKLQTLVTNK 360
>gi|209954788 activating transcription factor 6 beta isoform b [Homo
sapiens]
Length = 700
Score = 60.8 bits (146), Expect = 2e-09
Identities = 80/312 (25%), Positives = 129/312 (41%), Gaps = 28/312 (8%)
Query: 31 PQIATLAQVSMPAAHATSSAPTVTLVQLPNGQTVQVHGVIQAAQPSVIQSPQVQTVQSSC 90
P + ++ S P + ++ S+ + L P+ + + V V+ S+ +P + +
Sbjct: 80 PDLQVKSEPSSPCSSSSLSSESSRLSTEPSSEALGVGEVLHVKTESL--APPLCLLGD-- 135
Query: 91 KDLKRLFSGTQISTIAESEDSQESVDSVTDSQKRREILSRRPSYRKILNDLSSDAPGVPR 150
D F QI+ I S+DS +D Q + E +S S + LS+D+
Sbjct: 136 -DPTSSFETVQINVIPTSDDS-------SDVQTKIEPVSPCSSVNSEASLLSADSSSQAF 187
Query: 151 IEEEKSEEET---SAPAITTVTVPTP---IYQTSSGQYIAITQGGAIQLANNGTDGVQGL 204
I EE E +T S VP P Q S G + + G A+ +
Sbjct: 188 IGEEVLEVKTESLSPSGCLLWDVPAPSLGAVQISMGPSLDGSSGKALPTRKPPLQPKPVV 247
Query: 205 QTLTMTNAAATQPGTTILQYAQTTDGQQILVPSNQVVVQAASGDVQTYQIRTAPT--STI 262
T + A P TT+L Q ++ P V G ++ AP+
Sbjct: 248 LTTVPMPSRAVPPSTTVLL-------QSLVQPPPVSPVVLIQGAIRVQPEGPAPSLPRPE 300
Query: 263 APGVVMASSPALPTQPAEEAAR-KREVRLMKNREAARECRRKKKEYVKCLENRVAVLENQ 321
+V A P P +A KR+ R++KNRE+A + RRKKKEY++ LE R+ +
Sbjct: 301 RKSIVPAPMPGNSCPPEVDAKLLKRQQRMIKNRESACQSRRKKKEYLQGLEARLQAVLAD 360
Query: 322 NKTLIEELKALK 333
N+ L E AL+
Sbjct: 361 NQQLRRENAALR 372
>gi|20631977 activating transcription factor 6 beta isoform a [Homo
sapiens]
Length = 703
Score = 60.8 bits (146), Expect = 2e-09
Identities = 80/312 (25%), Positives = 129/312 (41%), Gaps = 28/312 (8%)
Query: 31 PQIATLAQVSMPAAHATSSAPTVTLVQLPNGQTVQVHGVIQAAQPSVIQSPQVQTVQSSC 90
P + ++ S P + ++ S+ + L P+ + + V V+ S+ +P + +
Sbjct: 83 PDLQVKSEPSSPCSSSSLSSESSRLSTEPSSEALGVGEVLHVKTESL--APPLCLLGD-- 138
Query: 91 KDLKRLFSGTQISTIAESEDSQESVDSVTDSQKRREILSRRPSYRKILNDLSSDAPGVPR 150
D F QI+ I S+DS +D Q + E +S S + LS+D+
Sbjct: 139 -DPTSSFETVQINVIPTSDDS-------SDVQTKIEPVSPCSSVNSEASLLSADSSSQAF 190
Query: 151 IEEEKSEEET---SAPAITTVTVPTP---IYQTSSGQYIAITQGGAIQLANNGTDGVQGL 204
I EE E +T S VP P Q S G + + G A+ +
Sbjct: 191 IGEEVLEVKTESLSPSGCLLWDVPAPSLGAVQISMGPSLDGSSGKALPTRKPPLQPKPVV 250
Query: 205 QTLTMTNAAATQPGTTILQYAQTTDGQQILVPSNQVVVQAASGDVQTYQIRTAPT--STI 262
T + A P TT+L Q ++ P V G ++ AP+
Sbjct: 251 LTTVPMPSRAVPPSTTVLL-------QSLVQPPPVSPVVLIQGAIRVQPEGPAPSLPRPE 303
Query: 263 APGVVMASSPALPTQPAEEAAR-KREVRLMKNREAARECRRKKKEYVKCLENRVAVLENQ 321
+V A P P +A KR+ R++KNRE+A + RRKKKEY++ LE R+ +
Sbjct: 304 RKSIVPAPMPGNSCPPEVDAKLLKRQQRMIKNRESACQSRRKKKEYLQGLEARLQAVLAD 363
Query: 322 NKTLIEELKALK 333
N+ L E AL+
Sbjct: 364 NQQLRRENAALR 375
>gi|56550067 cAMP responsive element binding protein 3-like 2 [Homo
sapiens]
Length = 520
Score = 52.8 bits (125), Expect = 4e-07
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 14/80 (17%)
Query: 274 LPTQPAEEAARKREVRLMKNREAARECRRKKKEYVKCLE--------------NRVAVLE 319
LP +EE A K+ R +KN+ +A+E RRKKKEY+ LE +V VLE
Sbjct: 285 LPLSKSEEKALKKIRRKIKNKISAQESRRKKKEYMDSLEKKVESCSTENLELRKKVEVLE 344
Query: 320 NQNKTLIEELKALKDLYCHK 339
N N+TL+++L+ L+ L K
Sbjct: 345 NTNRTLLQQLQKLQTLVMGK 364
>gi|18702325 cAMP responsive element binding protein 3-like 4 [Homo
sapiens]
Length = 395
Score = 49.7 bits (117), Expect = 4e-06
Identities = 24/60 (40%), Positives = 41/60 (68%)
Query: 274 LPTQPAEEAARKREVRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALK 333
LP AEE K+ R ++N+++A++ RR+KKEY+ LE+RVA QN+ L ++++ L+
Sbjct: 208 LPLTKAEERVLKKVRRKIRNKQSAQDSRRRKKEYIDGLESRVAACSAQNQELQKKVQELE 267
>gi|56786157 activating transcription factor 6 [Homo sapiens]
Length = 670
Score = 46.6 bits (109), Expect = 3e-05
Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 11/131 (8%)
Query: 214 ATQPGTTILQYAQTTDGQQI--LVPSNQVVVQAASGDVQ--TYQIRTAPT-STIAP--GV 266
A G T+L T Q ++PS Q V+ A G Q + + P S +P G
Sbjct: 226 APTKGQTVLLSQPTVVQLQAPGVLPSAQPVLAVAGGVTQLPNHVVNVVPAPSANSPVNGK 285
Query: 267 VMASSPALPTQP----AEEAARKREVRLMKNREAARECRRKKKEYVKCLENRVAVLENQN 322
+ + P L + ++ A +R+ R++KNRE+A + R+KKKEY+ LE R+ ++N
Sbjct: 286 LSVTKPVLQSTMRNVGSDIAVLRRQQRMIKNRESACQSRKKKKEYMLGLEARLKAALSEN 345
Query: 323 KTLIEELKALK 333
+ L +E LK
Sbjct: 346 EQLKKENGTLK 356
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.308 0.121 0.320
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,160,543
Number of Sequences: 37866
Number of extensions: 533800
Number of successful extensions: 3043
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 121
Number of HSP's that attempted gapping in prelim test: 2746
Number of HSP's gapped (non-prelim): 361
length of query: 341
length of database: 18,247,518
effective HSP length: 103
effective length of query: 238
effective length of database: 14,347,320
effective search space: 3414662160
effective search space used: 3414662160
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.