Search of human proteins with 197099958

Search of human proteins with 197099958

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|197099958 SAP30-like isoform 3 [Homo sapiens]
         (137 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|197099958 SAP30-like isoform 3 [Homo sapiens]                      277   2e-75
gi|197099936 SAP30-like isoform 2 [Homo sapiens]                      271   1e-73
gi|13375862 SAP30-like isoform 1 [Homo sapiens]                       255   7e-69
gi|4506783 Sin3A-associated protein, 30kDa [Homo sapiens]             153   4e-38
gi|170016069 zinc finger, CCHC domain containing 2 [Homo sapiens]      31   0.36 
gi|27436957 membrane associated guanylate kinase, WW and PDZ dom...    30   0.62 
gi|71274144 AT hook, DNA binding motif, containing 1 [Homo sapiens]    30   0.81 
gi|7662176 ProSAPiP1 protein [Homo sapiens]                            29   1.1  
gi|20149640 dual oxidase 1 precursor [Homo sapiens]                    28   1.8  
gi|28872751 dual oxidase 1 precursor [Homo sapiens]                    28   1.8  
gi|132566532 dual oxidase 2 precursor [Homo sapiens]                   28   2.4  
gi|148886752 immunoglobulin superfamily, member 9B [Homo sapiens]      28   2.4  
gi|21361458 Rho guanine nucleotide exchange factor (GEF) 17 [Hom...    28   3.1  
gi|78499633 phospholipase C, eta 2 [Homo sapiens]                      27   4.0  
gi|91825557 kinesin light chain 3 [Homo sapiens]                       27   5.3  
gi|112821681 G protein-regulated inducer of neurite outgrowth 1 ...    27   6.9  
gi|153792074 proline rich 12 [Homo sapiens]                            27   6.9  
gi|126091095 myotonic dystrophy protein kinase isoform 1 [Homo s...    26   9.0  
gi|47059024 myotonic dystrophy protein kinase isoform 2 [Homo sa...    26   9.0  
gi|32130516 serologically defined colon cancer antigen 1 [Homo s...    26   9.0  
gi|92859575 methyltransferase like 5 [Homo sapiens]                    26   9.0  

>gi|197099958 SAP30-like isoform 3 [Homo sapiens]
          Length = 137

 Score =  277 bits (709), Expect = 2e-75
 Identities = 137/137 (100%), Positives = 137/137 (100%)

Query: 1   MNGFSTEEDSREGPPAAPAAAAPGYGQSCCLIEDGERCVRPAGNASFSKRVQKSISQKKL 60
           MNGFSTEEDSREGPPAAPAAAAPGYGQSCCLIEDGERCVRPAGNASFSKRVQKSISQKKL
Sbjct: 1   MNGFSTEEDSREGPPAAPAAAAPGYGQSCCLIEDGERCVRPAGNASFSKRVQKSISQKKL 60

Query: 61  KLDIDKSLQVNTLRRYKRHYKLQTRPGFNKAQLAETVSRHFRNIPVNEKETLAYFIYMVK 120
           KLDIDKSLQVNTLRRYKRHYKLQTRPGFNKAQLAETVSRHFRNIPVNEKETLAYFIYMVK
Sbjct: 61  KLDIDKSLQVNTLRRYKRHYKLQTRPGFNKAQLAETVSRHFRNIPVNEKETLAYFIYMVK 120

Query: 121 SNKSRLDQKSEGGKQLE 137
           SNKSRLDQKSEGGKQLE
Sbjct: 121 SNKSRLDQKSEGGKQLE 137


>gi|197099936 SAP30-like isoform 2 [Homo sapiens]
          Length = 142

 Score =  271 bits (693), Expect = 1e-73
 Identities = 137/142 (96%), Positives = 137/142 (96%), Gaps = 5/142 (3%)

Query: 1   MNGFSTEEDSREGPPAAPAAAAPGYGQSCCLIEDGERCVRPAGNASFSKRVQKSISQKKL 60
           MNGFSTEEDSREGPPAAPAAAAPGYGQSCCLIEDGERCVRPAGNASFSKRVQKSISQKKL
Sbjct: 1   MNGFSTEEDSREGPPAAPAAAAPGYGQSCCLIEDGERCVRPAGNASFSKRVQKSISQKKL 60

Query: 61  KLDIDKS-----LQVNTLRRYKRHYKLQTRPGFNKAQLAETVSRHFRNIPVNEKETLAYF 115
           KLDIDKS     LQVNTLRRYKRHYKLQTRPGFNKAQLAETVSRHFRNIPVNEKETLAYF
Sbjct: 61  KLDIDKSVDLFQLQVNTLRRYKRHYKLQTRPGFNKAQLAETVSRHFRNIPVNEKETLAYF 120

Query: 116 IYMVKSNKSRLDQKSEGGKQLE 137
           IYMVKSNKSRLDQKSEGGKQLE
Sbjct: 121 IYMVKSNKSRLDQKSEGGKQLE 142


>gi|13375862 SAP30-like isoform 1 [Homo sapiens]
          Length = 183

 Score =  255 bits (652), Expect = 7e-69
 Identities = 137/183 (74%), Positives = 137/183 (74%), Gaps = 46/183 (25%)

Query: 1   MNGFSTEEDSREGPPAAPAAAAPGYGQSCCLIEDGERCVRPAGNASFSKRVQKSISQKKL 60
           MNGFSTEEDSREGPPAAPAAAAPGYGQSCCLIEDGERCVRPAGNASFSKRVQKSISQKKL
Sbjct: 1   MNGFSTEEDSREGPPAAPAAAAPGYGQSCCLIEDGERCVRPAGNASFSKRVQKSISQKKL 60

Query: 61  KLDIDKS----------------------------------------------LQVNTLR 74
           KLDIDKS                                              LQVNTLR
Sbjct: 61  KLDIDKSVRHLYICDFHKNFIQSVRNKRKRKTSDDGGDSPEHDTDIPEVDLFQLQVNTLR 120

Query: 75  RYKRHYKLQTRPGFNKAQLAETVSRHFRNIPVNEKETLAYFIYMVKSNKSRLDQKSEGGK 134
           RYKRHYKLQTRPGFNKAQLAETVSRHFRNIPVNEKETLAYFIYMVKSNKSRLDQKSEGGK
Sbjct: 121 RYKRHYKLQTRPGFNKAQLAETVSRHFRNIPVNEKETLAYFIYMVKSNKSRLDQKSEGGK 180

Query: 135 QLE 137
           QLE
Sbjct: 181 QLE 183


>gi|4506783 Sin3A-associated protein, 30kDa [Homo sapiens]
          Length = 220

 Score =  153 bits (387), Expect = 4e-38
 Identities = 87/171 (50%), Positives = 100/171 (58%), Gaps = 50/171 (29%)

Query: 10  SREGPPAAPAAAAPGYGQSCCLIEDGERCVRPAGNASFSKRVQKSISQKKLKLDIDKS-- 67
           S  GPP A   A PG GQ CCL EDGERC R AGNASFSKR+QKSISQKK+K+++DKS  
Sbjct: 51  SAAGPPGA---AGPGPGQLCCLREDGERCGRAAGNASFSKRIQKSISQKKVKIELDKSAR 107

Query: 68  ---------------------------------------------LQVNTLRRYKRHYKL 82
                                                        LQVNTLRRYKRH+KL
Sbjct: 108 HLYICDYHKNLIQSVRNRRKRKGSDDDGGDSPVQDIDTPEVDLYQLQVNTLRRYKRHFKL 167

Query: 83  QTRPGFNKAQLAETVSRHFRNIPVNEKETLAYFIYMVKSNKSRLDQKSEGG 133
            TRPG NKAQL E V  HFR+IPVNEK+TL YFIY VK++K++ D K + G
Sbjct: 168 PTRPGLNKAQLVEIVGCHFRSIPVNEKDTLTYFIYSVKNDKNKSDLKVDSG 218


>gi|170016069 zinc finger, CCHC domain containing 2 [Homo sapiens]
          Length = 1178

 Score = 30.8 bits (68), Expect = 0.36
 Identities = 17/40 (42%), Positives = 21/40 (52%)

Query: 27  QSCCLIEDGERCVRPAGNASFSKRVQKSISQKKLKLDIDK 66
           QSC  I+  E CV  A   S  KR   SI++KK K   +K
Sbjct: 545 QSCTTIQHPEHCVTSADQHSAEKRSLSSINKKKGKPQTEK 584


>gi|27436957 membrane associated guanylate kinase, WW and PDZ domain
            containing 2 [Homo sapiens]
          Length = 1455

 Score = 30.0 bits (66), Expect = 0.62
 Identities = 16/30 (53%), Positives = 17/30 (56%)

Query: 11   REGPPAAPAAAAPGYGQSCCLIEDGERCVR 40
            REGP AAPA A PG G S  L  +G    R
Sbjct: 1380 REGPGAAPAFAGPGGGGSGALEAEGRAGAR 1409


>gi|71274144 AT hook, DNA binding motif, containing 1 [Homo sapiens]
          Length = 1603

 Score = 29.6 bits (65), Expect = 0.81
 Identities = 14/22 (63%), Positives = 15/22 (68%), Gaps = 2/22 (9%)

Query: 13   GPPAAPAAAAPGYGQSCCLIED 34
            GPP  PAAAA GYG  C L+ D
Sbjct: 1526 GPPRGPAAAAAGYG--CPLLSD 1545


>gi|7662176 ProSAPiP1 protein [Homo sapiens]
          Length = 673

 Score = 29.3 bits (64), Expect = 1.1
 Identities = 14/50 (28%), Positives = 29/50 (58%)

Query: 36  ERCVRPAGNASFSKRVQKSISQKKLKLDIDKSLQVNTLRRYKRHYKLQTR 85
           ER  R    ASF++  +  + +K+  ++  K LQ++ +  Y+R+ +L+ R
Sbjct: 587 ERRARERQGASFAEERRVWLEEKEKVIEYQKQLQLSYVEMYQRNQQLERR 636


>gi|20149640 dual oxidase 1 precursor [Homo sapiens]
          Length = 1551

 Score = 28.5 bits (62), Expect = 1.8
 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)

Query: 89  NKAQLAETVSRHFRNIPVNEKETLAY--FIYMVKSNKSRL 126
           +KAQLAE V   FR     +KE L +  F +M++ + S L
Sbjct: 892 SKAQLAEVVESMFRESGFQDKEELTWEDFHFMLRDHNSEL 931


>gi|28872751 dual oxidase 1 precursor [Homo sapiens]
          Length = 1551

 Score = 28.5 bits (62), Expect = 1.8
 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)

Query: 89  NKAQLAETVSRHFRNIPVNEKETLAY--FIYMVKSNKSRL 126
           +KAQLAE V   FR     +KE L +  F +M++ + S L
Sbjct: 892 SKAQLAEVVESMFRESGFQDKEELTWEDFHFMLRDHNSEL 931


>gi|132566532 dual oxidase 2 precursor [Homo sapiens]
          Length = 1548

 Score = 28.1 bits (61), Expect = 2.4
 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)

Query: 89  NKAQLAETVSRHFRNIPVNEKETLAY--FIYMVKSNKSRL 126
           +KAQLAE V   FR     +KE L +  F +M++ + S L
Sbjct: 896 SKAQLAEVVESMFRESGFQDKEELTWEDFHFMLRDHDSEL 935


>gi|148886752 immunoglobulin superfamily, member 9B [Homo sapiens]
          Length = 1349

 Score = 28.1 bits (61), Expect = 2.4
 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 5/44 (11%)

Query: 3    GFSTEEDSREGPPAAPAAAAPG-----YGQSCCLIEDGERCVRP 41
            GF+T       PP  PA A PG     +GQ+      GE  +RP
Sbjct: 1274 GFTTLATGYPSPPPGPAPAGPGDSLDVFGQTPSPRRTGEELLRP 1317


>gi|21361458 Rho guanine nucleotide exchange factor (GEF) 17 [Homo
           sapiens]
          Length = 2063

 Score = 27.7 bits (60), Expect = 3.1
 Identities = 10/21 (47%), Positives = 13/21 (61%)

Query: 5   STEEDSREGPPAAPAAAAPGY 25
           S+ E+  EGPP  P A +P Y
Sbjct: 249 SSSEEEEEGPPQLPGAQSPAY 269


>gi|78499633 phospholipase C, eta 2 [Homo sapiens]
          Length = 1416

 Score = 27.3 bits (59), Expect = 4.0
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 4/54 (7%)

Query: 53  KSISQKKLKLDIDKSLQVNTLRRYKRHYKLQTRPG----FNKAQLAETVSRHFR 102
           KS++   ++++   S QV++    K H  LQ +P     FN+ QL+      +R
Sbjct: 634 KSVATHDIEMEAASSWQVSSFSETKAHQILQQKPAQYLRFNQQQLSRIYPSSYR 687


>gi|91825557 kinesin light chain 3 [Homo sapiens]
          Length = 504

 Score = 26.9 bits (58), Expect = 5.3
 Identities = 12/19 (63%), Positives = 15/19 (78%)

Query: 4   FSTEEDSREGPPAAPAAAA 22
           F +EE+ R+GP AA AAAA
Sbjct: 178 FPSEEEERKGPEAAGAAAA 196


>gi|112821681 G protein-regulated inducer of neurite outgrowth 1
           [Homo sapiens]
          Length = 1008

 Score = 26.6 bits (57), Expect = 6.9
 Identities = 12/22 (54%), Positives = 14/22 (63%)

Query: 7   EEDSREGPPAAPAAAAPGYGQS 28
           EE  R+G PA P AA  G G+S
Sbjct: 947 EEHGRQGAPAPPPAARAGPGRS 968


>gi|153792074 proline rich 12 [Homo sapiens]
          Length = 2036

 Score = 26.6 bits (57), Expect = 6.9
 Identities = 10/13 (76%), Positives = 11/13 (84%)

Query: 12   EGPPAAPAAAAPG 24
            +GPP APAAA PG
Sbjct: 1420 DGPPLAPAAAVPG 1432


>gi|126091095 myotonic dystrophy protein kinase isoform 1 [Homo
           sapiens]
          Length = 639

 Score = 26.2 bits (56), Expect = 9.0
 Identities = 13/34 (38%), Positives = 14/34 (41%)

Query: 3   GFSTEEDSREGPPAAPAAAAPGYGQSCCLIEDGE 36
           G  T  D REG P        GY  SC  + D E
Sbjct: 391 GGETLSDIREGAPLGVHLPFVGYSYSCMALRDSE 424


>gi|47059024 myotonic dystrophy protein kinase isoform 2 [Homo
           sapiens]
          Length = 629

 Score = 26.2 bits (56), Expect = 9.0
 Identities = 13/34 (38%), Positives = 14/34 (41%)

Query: 3   GFSTEEDSREGPPAAPAAAAPGYGQSCCLIEDGE 36
           G  T  D REG P        GY  SC  + D E
Sbjct: 381 GGETLSDIREGAPLGVHLPFVGYSYSCMALRDSE 414


>gi|32130516 serologically defined colon cancer antigen 1 [Homo
           sapiens]
          Length = 1076

 Score = 26.2 bits (56), Expect = 9.0
 Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 2/78 (2%)

Query: 48  SKRVQKSISQKKLKLDIDKSLQVNTLRRYKRHYKLQTRPGFNKAQLAETVSRHFRNIPVN 107
           +K++QK    K L +D+D SL  +     K++Y  +        +  E   + F++    
Sbjct: 447 NKQLQKPQKNKPLLVDVDLSL--SAYANAKKYYDHKRYAAKKTQKTVEAAEKAFKSAEKK 504

Query: 108 EKETLAYFIYMVKSNKSR 125
            K+TL     +    K+R
Sbjct: 505 TKQTLKEVQTVTSIQKAR 522


>gi|92859575 methyltransferase like 5 [Homo sapiens]
          Length = 209

 Score = 26.2 bits (56), Expect = 9.0
 Identities = 15/50 (30%), Positives = 24/50 (48%)

Query: 32  IEDGERCVRPAGNASFSKRVQKSISQKKLKLDIDKSLQVNTLRRYKRHYK 81
           +E     V     +S  + VQK  ++ K+K+DI   L+ +    YK H K
Sbjct: 146 LEMARTAVYSLHKSSTREHVQKKAAEWKIKIDIIAELRYDLPASYKFHKK 195


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.130    0.368 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,539,261
Number of Sequences: 37866
Number of extensions: 226737
Number of successful extensions: 715
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 694
Number of HSP's gapped (non-prelim): 24
length of query: 137
length of database: 18,247,518
effective HSP length: 91
effective length of query: 46
effective length of database: 14,801,712
effective search space: 680878752
effective search space used: 680878752
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.