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Search of human proteins with 195947391
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|195947391 RAD51 associated protein 1 isoform a [Homo
sapiens]
(352 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|195947391 RAD51 associated protein 1 isoform a [Homo sapiens] 690 0.0
gi|5453904 RAD51 associated protein 1 isoform b [Homo sapiens] 644 0.0
gi|56118310 nuclear casein kinase and cyclin-dependent kinase su... 69 6e-12
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 51 1e-06
gi|104526627 triadin [Homo sapiens] 51 2e-06
gi|32967605 bromodomain adjacent to zinc finger domain, 1A isofo... 50 4e-06
gi|32967603 bromodomain adjacent to zinc finger domain, 1A isofo... 50 4e-06
gi|5453567 craniofacial development protein 1 [Homo sapiens] 50 4e-06
gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens] 44 2e-04
gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens] 44 2e-04
gi|156104891 general transcription factor IIF, polypeptide 1, 74... 43 4e-04
gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo... 43 4e-04
gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [... 43 5e-04
gi|4507241 structure specific recognition protein 1 [Homo sapiens] 42 6e-04
gi|55769548 PHD finger protein 14 isoform 2 [Homo sapiens] 42 0.001
gi|55769550 PHD finger protein 14 isoform 1 [Homo sapiens] 42 0.001
gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1... 41 0.001
gi|156104889 myeloid/lymphoid or mixed-lineage leukemia (trithor... 41 0.001
gi|153945728 microtubule-associated protein 1B [Homo sapiens] 41 0.001
gi|34482047 adaptor-related protein complex 3, beta 2 subunit [H... 40 0.002
gi|217330641 IWS1 homolog [Homo sapiens] 40 0.002
gi|48255931 hepatoma-derived growth factor-related protein 2 iso... 40 0.002
gi|14249158 hepatoma-derived growth factor-related protein 2 iso... 40 0.002
gi|27734775 hypothetical protein LOC286499 [Homo sapiens] 40 0.002
gi|192807336 arsenate resistance protein 2 isoform e [Homo sapiens] 40 0.003
gi|192807332 arsenate resistance protein 2 isoform c [Homo sapiens] 40 0.003
gi|157266334 tubby like protein 1 [Homo sapiens] 40 0.003
gi|192807334 arsenate resistance protein 2 isoform d [Homo sapiens] 40 0.004
gi|58331218 arsenate resistance protein 2 isoform a [Homo sapiens] 40 0.004
gi|55956788 nucleolin [Homo sapiens] 39 0.005
>gi|195947391 RAD51 associated protein 1 isoform a [Homo sapiens]
Length = 352
Score = 690 bits (1780), Expect = 0.0
Identities = 352/352 (100%), Positives = 352/352 (100%)
Query: 1 MVRPVRHKKPVNYSQFDHSDSDDDFVSATVPLNKKSRTAPKELKQDKPKPNLNNLRKEEI 60
MVRPVRHKKPVNYSQFDHSDSDDDFVSATVPLNKKSRTAPKELKQDKPKPNLNNLRKEEI
Sbjct: 1 MVRPVRHKKPVNYSQFDHSDSDDDFVSATVPLNKKSRTAPKELKQDKPKPNLNNLRKEEI 60
Query: 61 PVQEKTPKKRLPEGTFSIPASAVPCTKMALDDKLYQRDLEVALALSVKELPTVTTNVQNS 120
PVQEKTPKKRLPEGTFSIPASAVPCTKMALDDKLYQRDLEVALALSVKELPTVTTNVQNS
Sbjct: 61 PVQEKTPKKRLPEGTFSIPASAVPCTKMALDDKLYQRDLEVALALSVKELPTVTTNVQNS 120
Query: 121 QDKSIEKHGSSKIETMNKSPHISNCSVASDYLDLDKITVEDDVGGVQGKRKAASKAAAQQ 180
QDKSIEKHGSSKIETMNKSPHISNCSVASDYLDLDKITVEDDVGGVQGKRKAASKAAAQQ
Sbjct: 121 QDKSIEKHGSSKIETMNKSPHISNCSVASDYLDLDKITVEDDVGGVQGKRKAASKAAAQQ 180
Query: 181 RKILLEGSDGDSANDTEPDFAPGEDSEDDSDFCESEDNDEDFSMRKSKVKEIKKKEVKVK 240
RKILLEGSDGDSANDTEPDFAPGEDSEDDSDFCESEDNDEDFSMRKSKVKEIKKKEVKVK
Sbjct: 181 RKILLEGSDGDSANDTEPDFAPGEDSEDDSDFCESEDNDEDFSMRKSKVKEIKKKEVKVK 240
Query: 241 SPVEKKEKKSKSKCNALVTSVDSAPAAVKSESQSLPKKVSLSSDTTRKPLEIRSPSAESK 300
SPVEKKEKKSKSKCNALVTSVDSAPAAVKSESQSLPKKVSLSSDTTRKPLEIRSPSAESK
Sbjct: 241 SPVEKKEKKSKSKCNALVTSVDSAPAAVKSESQSLPKKVSLSSDTTRKPLEIRSPSAESK 300
Query: 301 KPKWVPPAASGGSRSSSSPLVVVSVKSPNQSLRLGLSRLARVKPLHPNATST 352
KPKWVPPAASGGSRSSSSPLVVVSVKSPNQSLRLGLSRLARVKPLHPNATST
Sbjct: 301 KPKWVPPAASGGSRSSSSPLVVVSVKSPNQSLRLGLSRLARVKPLHPNATST 352
>gi|5453904 RAD51 associated protein 1 isoform b [Homo sapiens]
Length = 335
Score = 644 bits (1662), Expect = 0.0
Identities = 335/352 (95%), Positives = 335/352 (95%), Gaps = 17/352 (4%)
Query: 1 MVRPVRHKKPVNYSQFDHSDSDDDFVSATVPLNKKSRTAPKELKQDKPKPNLNNLRKEEI 60
MVRPVRHKKPVNYSQFDHSDSDDDFVSATVPLNKKSRTAPKELKQDKPKPNLNNLRKEEI
Sbjct: 1 MVRPVRHKKPVNYSQFDHSDSDDDFVSATVPLNKKSRTAPKELKQDKPKPNLNNLRKEEI 60
Query: 61 PVQEKTPKKRLPEGTFSIPASAVPCTKMALDDKLYQRDLEVALALSVKELPTVTTNVQNS 120
PVQEKTPKKR MALDDKLYQRDLEVALALSVKELPTVTTNVQNS
Sbjct: 61 PVQEKTPKKR-----------------MALDDKLYQRDLEVALALSVKELPTVTTNVQNS 103
Query: 121 QDKSIEKHGSSKIETMNKSPHISNCSVASDYLDLDKITVEDDVGGVQGKRKAASKAAAQQ 180
QDKSIEKHGSSKIETMNKSPHISNCSVASDYLDLDKITVEDDVGGVQGKRKAASKAAAQQ
Sbjct: 104 QDKSIEKHGSSKIETMNKSPHISNCSVASDYLDLDKITVEDDVGGVQGKRKAASKAAAQQ 163
Query: 181 RKILLEGSDGDSANDTEPDFAPGEDSEDDSDFCESEDNDEDFSMRKSKVKEIKKKEVKVK 240
RKILLEGSDGDSANDTEPDFAPGEDSEDDSDFCESEDNDEDFSMRKSKVKEIKKKEVKVK
Sbjct: 164 RKILLEGSDGDSANDTEPDFAPGEDSEDDSDFCESEDNDEDFSMRKSKVKEIKKKEVKVK 223
Query: 241 SPVEKKEKKSKSKCNALVTSVDSAPAAVKSESQSLPKKVSLSSDTTRKPLEIRSPSAESK 300
SPVEKKEKKSKSKCNALVTSVDSAPAAVKSESQSLPKKVSLSSDTTRKPLEIRSPSAESK
Sbjct: 224 SPVEKKEKKSKSKCNALVTSVDSAPAAVKSESQSLPKKVSLSSDTTRKPLEIRSPSAESK 283
Query: 301 KPKWVPPAASGGSRSSSSPLVVVSVKSPNQSLRLGLSRLARVKPLHPNATST 352
KPKWVPPAASGGSRSSSSPLVVVSVKSPNQSLRLGLSRLARVKPLHPNATST
Sbjct: 284 KPKWVPPAASGGSRSSSSPLVVVSVKSPNQSLRLGLSRLARVKPLHPNATST 335
>gi|56118310 nuclear casein kinase and cyclin-dependent kinase
substrate 1 [Homo sapiens]
Length = 243
Score = 68.9 bits (167), Expect = 6e-12
Identities = 63/216 (29%), Positives = 94/216 (43%), Gaps = 26/216 (12%)
Query: 106 SVKELPTVTTNVQNSQDKSIEKHGSSKIETMNKSPHISNCSVASDYLDLDKITVEDDVGG 165
S +E + +NSQ+ S E ++T H + D ++D
Sbjct: 40 SPREAKNKRRSGKNSQEDS-EDSEDKDVKTKKDDSHSAE----------DSEDEKEDHKN 88
Query: 166 VQGKRKAASKAAAQQRKILLE--GSDGDSANDTEPDFAPGEDSEDDSDFCESEDNDEDFS 223
V+ +R+AASKAA++QR++L+E GS+ + + E F +DS D DF +D+D D+
Sbjct: 89 VRQQRQAASKAASKQREMLMEDVGSEEEQEEEDEAPFQE-KDSGSDEDFLMEDDDDSDYG 147
Query: 224 MRKSKVKEIKKKEVKVKSPVEKKEKKSKSKCNALVTSVDSAPAAVKSESQ-SLPKKVSLS 282
K K KK VK P K++K K + A VT P+ VK + + P S
Sbjct: 148 SSKKK----NKKMVKKSKPERKEKKMPKPRLKATVT-----PSPVKGKGKVGRPTASKAS 198
Query: 283 SDTTRKPLE--IRSPSAESKKPKWVPPAASGGSRSS 316
+ T P E S KK PP G S
Sbjct: 199 KEKTPSPKEEDEEPESPPEKKTSTSPPPEKSGDEGS 234
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 51.2 bits (121), Expect = 1e-06
Identities = 62/261 (23%), Positives = 114/261 (43%), Gaps = 50/261 (19%)
Query: 87 KMALDDKL--YQRDLE------------VALALSVKELPTVTTNVQNSQDKSIEKHGSSK 132
KMALD ++ Y++ LE +L + ++P+V+T+++ ++ I+ S+
Sbjct: 392 KMALDIEIAAYRKLLEGEECRIGFGPIPFSLPEGLPKIPSVSTHIKVKSEEKIKVVEKSE 451
Query: 133 IETMNKSPHISNCSVASDYLDLDKITVEDDVGGVQGKRKAASKAAAQQRKILLEGSDGDS 192
ET+ V +++T E++ K A ++ EG + +
Sbjct: 452 KETVIVEEQTEETQVT------EEVTEEEE------------KEAKEE-----EGKEEEG 488
Query: 193 ANDTEPDFAPGEDSEDDSDFCESEDNDEDFSMRKSKVKEIKKKEVKVKSPVEKKEKKSKS 252
+ E E E+++ +E+ KS VKE K + KSP EK+E KS +
Sbjct: 489 GEEEE-----AEGGEEETKSPPAEEAASPEKEAKSPVKEEAKSPAEAKSP-EKEEAKSPA 542
Query: 253 KCNALVTSVDSAPAAVKSESQSLPKKVSLSSDTTRKPLEIRSP--SAESKKPKWVPPAAS 310
+ V S + A + K E++S P+ S + + P E++SP + K + PA +
Sbjct: 543 E----VKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEA 598
Query: 311 GGSRSSSSPLVVVSVKSPNQS 331
+ SP V KSP ++
Sbjct: 599 KSPEKAKSP-VKEEAKSPAEA 618
Score = 43.5 bits (101), Expect = 3e-04
Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 7/109 (6%)
Query: 226 KSKVKEIKKKEVKVKSPVEKKEK---KSKSKCNALVTSVDSAPAAVKSESQSLPKKVSLS 282
KS VKE K K KSPV+++ K K+KS + + A + VK E++S P+K
Sbjct: 695 KSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKS-PEKA--K 751
Query: 283 SDTTRKPLEIRSPSAESKKPKWVPPAASGGSRSSSSPLVVVSVKSPNQS 331
S K L+++SP A++ + A + SP V VKSP ++
Sbjct: 752 SPEKAKTLDVKSPEAKTPAKEEARSPADKFPEKAKSP-VKEEVKSPEKA 799
Score = 40.8 bits (94), Expect = 0.002
Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 5/134 (3%)
Query: 173 ASKAAAQQRKILLEGSDGDSANDTEPDFA--PGEDSEDDSDFCESEDNDEDFSMRKSKVK 230
A A ++ K E + A + A P E + +S + KS K
Sbjct: 584 AKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTK 643
Query: 231 EIKKKEVKVKSPVEKKEK---KSKSKCNALVTSVDSAPAAVKSESQSLPKKVSLSSDTTR 287
E K K KSP +++ K K+KS A S + A + VK+E++S K S + +
Sbjct: 644 EEAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAK 703
Query: 288 KPLEIRSPSAESKK 301
P + +SP E K
Sbjct: 704 SPEKAKSPVKEEAK 717
Score = 40.0 bits (92), Expect = 0.003
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 16/149 (10%)
Query: 198 PDFAPGEDSEDDSDFCESEDNDEDFSMRKSKVK---EIKKKEVKVKSPVEKKEK------ 248
P A + E+ E + ++ S K + K E K E K KSPV+++ K
Sbjct: 561 PPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPE-KAKSPVKEEAKSPAEAK 619
Query: 249 ---KSKSKCNALVTSVDSAPAAVKSESQSLPKKVSLSSDTTRKPLEIRSP-SAESKKPKW 304
K ++K A V S + A + K E++S K S + + P + +SP AE+K P+
Sbjct: 620 SPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEK 679
Query: 305 V--PPAASGGSRSSSSPLVVVSVKSPNQS 331
P A S + V KSP ++
Sbjct: 680 AKSPVKAEAKSPEKAKSPVKEEAKSPEKA 708
Score = 35.8 bits (81), Expect = 0.059
Identities = 56/249 (22%), Positives = 93/249 (37%), Gaps = 52/249 (20%)
Query: 34 KKSRTAPKELKQDKPKPNLNNLRKEEI--PVQEKTPKKRL-----PEGTFSIPASAVPCT 86
K A LK+D P +KEE+ PV+E+ + + P+ A A P T
Sbjct: 794 KSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKT 853
Query: 87 KMALDDKLYQRDLEVALALSVKELPTVTTNVQNSQDKSIEKHGSSKIETMNKSPHISNCS 146
+ D K + KE P V+ ++ ++EK SK+E +
Sbjct: 854 EEKKDSKKEEAPK--------KEAPK--PKVEEKKEPAVEKPKESKVEAKKEEAEDKKKV 903
Query: 147 VASDYLDLDKITVEDDVGGVQGKRKAASKAAAQQRKILLEGSDGDSANDTEPDFAPGEDS 206
+ K+ V++D K K ++ A + EPD A ++
Sbjct: 904 PTPEKEAPAKVEVKEDA-----KPKEKTEVAKK-----------------EPDDAKAKEP 941
Query: 207 EDDSDFCESEDNDEDFSMRKSKVKEIKKKEVKVKSPVEKKEKKSKSKCNALVTSVD-SAP 265
++ E+ +D KE K K P EK + ++K+K + S + S P
Sbjct: 942 SKPAEKKEAAPEKKD------------TKEEKAKKPEEKPKTEAKAKEDDKTLSKEPSKP 989
Query: 266 AAVKSESQS 274
A K+E S
Sbjct: 990 KAEKAEKSS 998
Score = 35.8 bits (81), Expect = 0.059
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 226 KSKVKEIKKKEVKVKSPVEKKEKKSKSKCNALVTSVDS--APAAVKSESQSLPKKVSLSS 283
K+ KEI KKE +VKSPV+++EK + K + APA K+E + KK
Sbjct: 808 KAPEKEIPKKE-EVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPK 866
Query: 284 DTTRKPL--EIRSPSAESKK 301
KP E + P+ E K
Sbjct: 867 KEAPKPKVEEKKEPAVEKPK 886
Score = 33.1 bits (74), Expect = 0.38
Identities = 64/322 (19%), Positives = 117/322 (36%), Gaps = 25/322 (7%)
Query: 4 PVRHKKPVNYSQFDHSDSDDDFVSATVPLNKKSRTAPKELKQDKPKPNLNNLRKEEIPVQ 63
P + K PV ++ + V A +K+++ KE + K + + P +
Sbjct: 663 PEKAKSPVK-AEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEK 721
Query: 64 EKTPKKRLPEGTFSIPASAVPCTKMALDDKLYQRDLEVALALSVKELPTVTTNVQNSQ-- 121
K+P K + P A K + E A L VK T + ++
Sbjct: 722 AKSPVKEEAK----TPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEARSP 777
Query: 122 -DKSIEKHGSSKIETMNKSPHISNCSVASDYLDLDKITVEDDVGGVQGKRKAASKAAAQQ 180
DK EK S ++ KSP + + D +K + +K K+ ++
Sbjct: 778 ADKFPEK-AKSPVKEEVKSPEKAKSPLKEDAKAPEK----------EIPKKEEVKSPVKE 826
Query: 181 RKILLEGSDGDSANDTEPDFAPGEDSEDDSDFCESEDNDEDFSMRKSKVKEIKKKEVKVK 240
+ E + E + AP ++ + E+ + K KV+E KKE V+
Sbjct: 827 EEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKK-EAPKPKVEE--KKEPAVE 883
Query: 241 SPVEKKEKKSKSKCN---ALVTSVDSAPAAVKSESQSLPKKVSLSSDTTRKPLEIRSPSA 297
P E K + K + + T APA V+ + + PK+ + + + + PS
Sbjct: 884 KPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPSK 943
Query: 298 ESKKPKWVPPAASGGSRSSSSP 319
++K + P + P
Sbjct: 944 PAEKKEAAPEKKDTKEEKAKKP 965
>gi|104526627 triadin [Homo sapiens]
Length = 729
Score = 50.8 bits (120), Expect = 2e-06
Identities = 76/343 (22%), Positives = 120/343 (34%), Gaps = 37/343 (10%)
Query: 4 PVRHKKPVNYSQFDHSDSDDDFVSATVPLNKKSRTAPKELKQDKPKPNLNNLRKEEIPVQ 63
P KK ++ + + + + + V +K + KE ++K KP KE+I +
Sbjct: 136 PPLRKKEIHKDKTEKQEKPERKIQTKVTHKEKEKG--KEKVREKEKPEKKATHKEKIEKK 193
Query: 64 EKTPKKRLPEGTFSIPASAVPCTKMALDDKLYQRDLEVALALSVKELPTVTTNVQNSQDK 123
EK K L + + K + K +++ A VKE+ + + +DK
Sbjct: 194 EKPETKTLAKEQKKAKTAEKSEEKTKKEVKGGKQEKVKQTAAKVKEVQKTPSKPKEKEDK 253
Query: 124 SIEKHGSSKIETMNKSPHISNCSVASDYLDLDKITVEDDVGGVQGKRKAASKAAAQQRKI 183
EK SK E + + C D V G K A
Sbjct: 254 --EKAAVSKHE---QKDQYAFCRYMIDIF-------------VHGDLKPGQSPA------ 289
Query: 184 LLEGSDGDSANDTEPDFAPGEDSEDDSDFCESEDNDEDFSMRKSKVKEIKKKEVKVKSPV 243
+ + A+ P E+ E + E + E K +K KK E + V
Sbjct: 290 IPPPLPTEQASRPTPASPALEEKEGEKKKAEKKVTSETKKKEKEDIK--KKSEKETAIDV 347
Query: 244 EKKEKKSKSKCNALVTSVDSAPAAVKSESQSLPKKVSLSSDTTRKPLEIRSPSA--ESKK 301
EKKE S+ + + AA K E + KK T+KP E+ P + KK
Sbjct: 348 EKKEPGKASETKQGTVKIAAQAAAKKDEKKEDSKK-------TKKPAEVEQPKGKKQEKK 400
Query: 302 PKWVPPAASGGSRSSSSPLVVVSVKSPNQSLRLGLSRLARVKP 344
K V PA S S V K+ +G + + P
Sbjct: 401 EKHVEPAKSPKKEHSVPSDKQVKAKTERAKEEIGAVSIKKAVP 443
Score = 37.0 bits (84), Expect = 0.027
Identities = 45/173 (26%), Positives = 67/173 (38%), Gaps = 17/173 (9%)
Query: 143 SNCSVASDYLDLDKITVEDDVGGVQGKRKAASKAAAQQRKILLEGSDGDSANDT-EPDFA 201
S + SD L L + +E+ + G S + + + E DGD D E D
Sbjct: 80 SIAKIGSDPLKLVRDAMEETTDWIYGFFSLLSDIISSEDE---EDDDGDEDTDKGEIDEP 136
Query: 202 PGEDSEDDSDFCESEDNDEDFSMRK--SKVKEIKKKEVKVKSPVEKK-------EKKSKS 252
P E D E ++ E K K KE K++V+ K EKK EKK K
Sbjct: 137 PLRKKEIHKDKTEKQEKPERKIQTKVTHKEKEKGKEKVREKEKPEKKATHKEKIEKKEKP 196
Query: 253 KCNALVTSVDSAPAAVKSESQSLPK----KVSLSSDTTRKPLEIRSPSAESKK 301
+ L A A KSE ++ + K T K E++ ++ K+
Sbjct: 197 ETKTLAKEQKKAKTAEKSEEKTKKEVKGGKQEKVKQTAAKVKEVQKTPSKPKE 249
Score = 34.3 bits (77), Expect = 0.17
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 11/107 (10%)
Query: 199 DFAPGEDSEDDSDFCESEDNDEDFSMRKSKVKEIKKKEVKVKSPVEKKEKKSKSKCNALV 258
D ED EDD D DED + ++KKE+ K EK+EK + K V
Sbjct: 112 DIISSEDEEDD-------DGDEDTDKGEIDEPPLRKKEIH-KDKTEKQEKPER-KIQTKV 162
Query: 259 TSVDSAPAAVKSESQSLPKKVSLSSDTTRK--PLEIRSPSAESKKPK 303
T + K + P+K + + K E ++ + E KK K
Sbjct: 163 THKEKEKGKEKVREKEKPEKKATHKEKIEKKEKPETKTLAKEQKKAK 209
>gi|32967605 bromodomain adjacent to zinc finger domain, 1A isoform b
[Homo sapiens]
Length = 1524
Score = 49.7 bits (117), Expect = 4e-06
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 12/169 (7%)
Query: 170 RKAASKAAAQQRKILLEGSDGDSANDTEPDFAPGEDSEDDSDFCESE-DNDEDFSMRKSK 228
++ + + +++QR L D + + E D G++ E S+ E E + DED S + +
Sbjct: 1166 KQRSRRLSSRQRPSLESDEDVEDSMGGEDDEVDGDEEEGQSEEEEYEVEQDEDDSQEEEE 1225
Query: 229 VKEIKKKEVKVKSPVEKKEKKSKSKCNALVTSVDSAPAAVKSESQSLPKKVSLSSDTTRK 288
V K+ +V+ PV+ + K S S + P S SQ K ++SS T R
Sbjct: 1226 VSLPKRGRPQVRLPVKTRGKLSSSFSS---RGQQQEPGRYPSRSQQSTPKTTVSSKTGRS 1282
Query: 289 PLEIRS-PSAESKKPKWVPPAASGGSRSSSSPL---VVVSVKSPNQSLR 333
+I S P E+K + AS +R S PL V V + SP + R
Sbjct: 1283 LRKINSAPPTETKSLR----IASRSTRHSHGPLQADVFVELLSPRRKRR 1327
Score = 29.6 bits (65), Expect = 4.3
Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Query: 157 ITVEDDVGGVQGKRKAASKAAAQQRKILLEGSDGDSANDTEPDFAPGEDSEDDSDFCESE 216
I+ ED+V Q SKA ++ K+L + A F + + +D E++
Sbjct: 285 ISQEDNVANKQTLASYRSKATKERDKLLKQEEMKSLA------FEKAKLKREKADALEAK 338
Query: 217 DND-EDFSMRKSKVKEI------KKKEVKVKSPVEKKEKKSK 251
+ ED ++ ++K+I KKKE K + VE+++++ K
Sbjct: 339 KKEKEDKEKKREELKKIVEEERLKKKEEKERLKVEREKEREK 380
>gi|32967603 bromodomain adjacent to zinc finger domain, 1A isoform a
[Homo sapiens]
Length = 1556
Score = 49.7 bits (117), Expect = 4e-06
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 12/169 (7%)
Query: 170 RKAASKAAAQQRKILLEGSDGDSANDTEPDFAPGEDSEDDSDFCESE-DNDEDFSMRKSK 228
++ + + +++QR L D + + E D G++ E S+ E E + DED S + +
Sbjct: 1198 KQRSRRLSSRQRPSLESDEDVEDSMGGEDDEVDGDEEEGQSEEEEYEVEQDEDDSQEEEE 1257
Query: 229 VKEIKKKEVKVKSPVEKKEKKSKSKCNALVTSVDSAPAAVKSESQSLPKKVSLSSDTTRK 288
V K+ +V+ PV+ + K S S + P S SQ K ++SS T R
Sbjct: 1258 VSLPKRGRPQVRLPVKTRGKLSSSFSS---RGQQQEPGRYPSRSQQSTPKTTVSSKTGRS 1314
Query: 289 PLEIRS-PSAESKKPKWVPPAASGGSRSSSSPL---VVVSVKSPNQSLR 333
+I S P E+K + AS +R S PL V V + SP + R
Sbjct: 1315 LRKINSAPPTETKSLR----IASRSTRHSHGPLQADVFVELLSPRRKRR 1359
Score = 29.6 bits (65), Expect = 4.3
Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Query: 157 ITVEDDVGGVQGKRKAASKAAAQQRKILLEGSDGDSANDTEPDFAPGEDSEDDSDFCESE 216
I+ ED+V Q SKA ++ K+L + A F + + +D E++
Sbjct: 285 ISQEDNVANKQTLASYRSKATKERDKLLKQEEMKSLA------FEKAKLKREKADALEAK 338
Query: 217 DND-EDFSMRKSKVKEI------KKKEVKVKSPVEKKEKKSK 251
+ ED ++ ++K+I KKKE K + VE+++++ K
Sbjct: 339 KKEKEDKEKKREELKKIVEEERLKKKEEKERLKVEREKEREK 380
>gi|5453567 craniofacial development protein 1 [Homo sapiens]
Length = 299
Score = 49.7 bits (117), Expect = 4e-06
Identities = 48/214 (22%), Positives = 88/214 (41%), Gaps = 38/214 (17%)
Query: 153 DLDKITVEDDVGG------VQGKRKAASKAAAQQRK---ILLEGSDGDSANDTEPDFAPG 203
D++++ ED+V G QGK++ A A++R+ + LE + + AN + G
Sbjct: 29 DVNELVKEDEVDGEEQTQKTQGKKRKAQSIPARKRRQGGLSLEEEEEEDANSE----SEG 84
Query: 204 EDSEDDSDFCESEDNDEDFSMRKSKVKEI---------KKKEVKVKSPVEKKEKKSKSKC 254
SE++ D E E RK K E+ K +V + V+K E+ ++
Sbjct: 85 SSSEEEDDAAEQEKGIGSEDARKKKEDELWASFLNDVGPKSKVPPSTQVKKGEETEETSS 144
Query: 255 NALVTSVDSAPAAVKSESQSLPKKVSLSSDTTRKPLEIRSPSAESKK------------- 301
+ L+ + ++E + K + + R E+ + S E+K
Sbjct: 145 SKLLVKAEELEKPKETEKVKITKVFDFAGEEVRVTKEVDATSKEAKSFFKQNEKEKPQAN 204
Query: 302 -PKWVP--PAASGGSRSSSSPLVVVSVKSPNQSL 332
P +P PA SG RSS ++ + + Q +
Sbjct: 205 VPSALPSLPAGSGLKRSSGMSSLLGKIGAKKQKM 238
>gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens]
Length = 330
Score = 44.3 bits (103), Expect = 2e-04
Identities = 48/176 (27%), Positives = 81/176 (46%), Gaps = 25/176 (14%)
Query: 150 DYLDLDKITVEDDVGGVQGKRKAASKAAAQQRKILLEGSDGDSANDTEPDFAPGEDSEDD 209
+Y++ ++ E D G + K+K KA IL E D +S + E ++ ED
Sbjct: 113 EYIEREESDGEYDEFG-RKKKKYRGKAVGPA-SILKEVEDKESEGEEE------DEDEDL 164
Query: 210 SDFCESEDNDED------FSMRKSKVKEIKKKEVKVKSPVEKKEKKSKSKCNALVTSVDS 263
S + ED DED +++ S+ ++ KK+ +S + + S+S +S S
Sbjct: 165 SKYKLDEDEDEDDADLSKYNLDASEEEDSNKKKSNRRSRSKSRSSHSRS------SSRSS 218
Query: 264 APAAVKSESQSLPKKVSLSSDTTRKPLEIRSPSAESKKPKWVPPAASGGSRSSSSP 319
+P++ +S S+S + S S +R RS S SK ++S R SSSP
Sbjct: 219 SPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKS-----RSSSRSHRGSSSP 269
>gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens]
Length = 320
Score = 44.3 bits (103), Expect = 2e-04
Identities = 48/176 (27%), Positives = 81/176 (46%), Gaps = 25/176 (14%)
Query: 150 DYLDLDKITVEDDVGGVQGKRKAASKAAAQQRKILLEGSDGDSANDTEPDFAPGEDSEDD 209
+Y++ ++ E D G + K+K KA IL E D +S + E ++ ED
Sbjct: 113 EYIEREESDGEYDEFG-RKKKKYRGKAVGPA-SILKEVEDKESEGEEE------DEDEDL 164
Query: 210 SDFCESEDNDED------FSMRKSKVKEIKKKEVKVKSPVEKKEKKSKSKCNALVTSVDS 263
S + ED DED +++ S+ ++ KK+ +S + + S+S +S S
Sbjct: 165 SKYKLDEDEDEDDADLSKYNLDASEEEDSNKKKSNRRSRSKSRSSHSRS------SSRSS 218
Query: 264 APAAVKSESQSLPKKVSLSSDTTRKPLEIRSPSAESKKPKWVPPAASGGSRSSSSP 319
+P++ +S S+S + S S +R RS S SK ++S R SSSP
Sbjct: 219 SPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKS-----RSSSRSHRGSSSP 269
>gi|156104891 general transcription factor IIF, polypeptide 1, 74kDa
[Homo sapiens]
Length = 517
Score = 43.1 bits (100), Expect = 4e-04
Identities = 52/241 (21%), Positives = 97/241 (40%), Gaps = 22/241 (9%)
Query: 95 YQRDLEVALALSVKELPTVTTNVQNSQDKSIEKHGSSKIETMNKSPHISNCSVASDYLDL 154
++R +V S+ + + Q+ ++ EK G K + + ++SD D
Sbjct: 164 WERRNKVLNHFSIMQQRRLKDQDQDEDEEEKEKRGRRKASELRIHDLEDDLEMSSDASDA 223
Query: 155 DKITVEDDVGGVQGKRKAASKAAAQQRKILLEGSDGDSANDTEPDFAPGEDSEDDSDFCE 214
++ G V +K A A ++K +GSD ++ D++ G++ + SD
Sbjct: 224 SG----EEGGRVPKAKKKAPLAKGGRKKKKKKGSDDEAFEDSDDGDFEGQEVDYMSDGSS 279
Query: 215 SEDNDEDFSMRKSKVKEIKK----------KEVKVKSPVEKKEKKSKSKC---NALVTSV 261
S + + + + +E K + + K P E KE++ + K
Sbjct: 280 SSQEEPESKAKAPQQEEGPKGVDEQSDSSEESEEEKPPEEDKEEEEEKKAPTPQEKKRRK 339
Query: 262 DSAPAAVKSESQSLPKKVSLSSDTTRK---PLEIRSPSAESKKPKWVP--PAASGGSRSS 316
DS+ + SE + + S + +K P R PS S + P P+A GGS SS
Sbjct: 340 DSSEESDSSEESDIDSEASSALFMAKKKTPPKRERKPSGGSSRGNSRPGTPSAEGGSTSS 399
Query: 317 S 317
+
Sbjct: 400 T 400
>gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo
sapiens]
Length = 2168
Score = 43.1 bits (100), Expect = 4e-04
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 188 SDGDSANDTEPDFAPGEDSEDDSDFCESEDNDEDFSMRKSKVKEIKKKEVKVKSPVEKKE 247
SD +S +DTE G + EDD D + +++D D K+ +K + K VKSP
Sbjct: 635 SDSNSESDTE-----GSEEEDDDDK-DQDESDSDTEGEKTSMK-LNKTTSSVKSPSMSLT 687
Query: 248 KKSKSKCNALVTSVDSAPAAVKSESQSLPKKVSLSSDT 285
S + + + SAPAA+ SESQS P + SS T
Sbjct: 688 GHSTPRNLHIAKAPGSAPAALCSESQS-PAFLGTSSST 724
Score = 31.2 bits (69), Expect = 1.5
Identities = 27/129 (20%), Positives = 58/129 (44%), Gaps = 20/129 (15%)
Query: 180 QRKILLEGSDGDSANDTEPDFAPGEDSEDDSDFCESEDNDEDFSMRKSKVKEIKKKEVKV 239
++K + S+ DS + T D + S DSD E ++ +ED S+ +S+ +
Sbjct: 235 RKKAMESSSNSDSDSGTSSDTSSEGISSSDSDDLEEDEEEEDQSIEESEDDDSD------ 288
Query: 240 KSPVEKKEKKSKSKCNALVTSV-----DSAPAAVKSESQSLPKKVSLSSDTTRKPLEIRS 294
+ E + KS L+ + D A K++ + + + + L+S++ + S
Sbjct: 289 ----SESEAQHKSNNQVLLHGISDPKADGQKATEKAQEKRIHQPLPLASES-----QTHS 339
Query: 295 PSAESKKPK 303
++ K+P+
Sbjct: 340 FQSQQKQPQ 348
Score = 30.8 bits (68), Expect = 1.9
Identities = 47/191 (24%), Positives = 73/191 (38%), Gaps = 28/191 (14%)
Query: 167 QGKRKAASKAA--------AQQRKILLEGSDGDSANDTEPDFAPGEDSED------DSDF 212
QGK KA S + K L+E G T+ D +DSED + D
Sbjct: 562 QGKEKAVSNNVNPVKTQHHSHPAKSLVEQFRG-----TDSDIPSSKDSEDSNEDEEEDDE 616
Query: 213 CESEDNDEDFSMRKSKVKEIKKKEVKVK-SPVEKKEKKSKSKCNALVTSVDSAPAAVKSE 271
E E++DED S+ + E + S E + K + + ++ ++ K+
Sbjct: 617 EEDEEDDEDDESDDSQSESDSNSESDTEGSEEEDDDDKDQDESDSDTEGEKTSMKLNKTT 676
Query: 272 SQSLPKKVSLSSDTTRKPLEIRSPSAESKKPKWVPPAASGGSRSSSSPLVVVSVKSPNQS 331
S +SL+ +T + L I +K P P A S S S + S + S
Sbjct: 677 SSVKSPSMSLTGHSTPRNLHI------AKAPGSAPAALC--SESQSPAFLGTSSSTLTSS 728
Query: 332 LRLGLSRLARV 342
G S+ RV
Sbjct: 729 PHSGTSKRRRV 739
Score = 28.5 bits (62), Expect = 9.5
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 10/57 (17%)
Query: 188 SDGDSANDTEPDFAPGEDSEDD----------SDFCESEDNDEDFSMRKSKVKEIKK 234
SD D +D + D ED ED+ +D CE ED + + + K+I+K
Sbjct: 1297 SDYDDDDDDDSDDQGDEDDEDEEDKEDKKGKKTDICEDEDEGDQAASVEELEKQIEK 1353
>gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [Homo
sapiens]
Length = 3969
Score = 42.7 bits (99), Expect = 5e-04
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 13/110 (11%)
Query: 226 KSKVKEIKKKEVKVKSPVEKKEKKSKSKCNALVTSVDSAPAAVKSESQSLPKKVSLSSDT 285
+ + K +KKKE K K+ +K K+S N + +S P+A + + PKK S S
Sbjct: 1207 QKQAKAVKKKEKKSKTSEKKDSKESSVVKNVVDSSQKPTPSAREDPA---PKKSS-SEPP 1262
Query: 286 TRKPLEIRS-------PSAESKKPKWVPPAASGGSRSSSSPLVVVSVKSP 328
RKP+E +S P ESK+ PA+ S+ S P +V+ + P
Sbjct: 1263 PRKPVEEKSEEGNVSAPGPESKQA--TTPASRKSSKQVSQPALVIPPQPP 1310
Score = 32.7 bits (73), Expect = 0.50
Identities = 32/137 (23%), Positives = 56/137 (40%), Gaps = 7/137 (5%)
Query: 168 GKRKAASKAAAQQRKILLEGSDGDSANDTEPDFAPGEDSE-----DDSDFCESEDNDEDF 222
G+ ++ +Q E S P F PG +E D + S+D D D
Sbjct: 807 GESAEKNQRPRKQTSAPAEPFSSSSPTPLFPWFTPGSQTERGRNKDKAPEELSKDRDADK 866
Query: 223 SMRKSKVKEIKKKEVKVKSPVEKKEKKSKSKCNALVTSVDSAPAAVKSESQSLPKKVSLS 282
S+ K K +E ++ K +KEK+ K + + +S P S+ + + + V+ S
Sbjct: 867 SVEKDKSRERDREREKENKRESRKEKRKKG--SEIQSSSALYPVGRVSKEKVVGEDVATS 924
Query: 283 SDTTRKPLEIRSPSAES 299
S + +S S +S
Sbjct: 925 SSAKKATGRKKSSSHDS 941
Score = 28.9 bits (63), Expect = 7.3
Identities = 52/238 (21%), Positives = 89/238 (37%), Gaps = 9/238 (3%)
Query: 86 TKMALDDKLYQRDLEVA--LALSVKELPTVTTNVQNSQDKSIEKHGSSKIETMNKSPHI- 142
+ M DDK E A LA +K + VT N + Q+ ++K S+ +
Sbjct: 1106 SSMGNDDKSSIAGSEDAEPLAPPIKPIKPVTRN-KAPQEPPVKKGRRSRRCGQCPGCQVP 1164
Query: 143 SNCSVASDYLDLDKITVEDDVGGVQGKRKAASKAAAQQRKILLEGSDGDSANDTEPDFAP 202
+C V ++ LD K + RK + + L + + + + +
Sbjct: 1165 EDCGVCTNCLDKPKFGGRNIKKQCCKMRKCQNLQWMPSKAYLQKQAKAVKKKEKKSKTSE 1224
Query: 203 GEDSEDDSDFCESEDNDEDF--SMRKSKVKEIKKKEVKVKSPVEKKEKKSKSKCNALVTS 260
+DS++ S D+ + S R+ + E + PVE+K ++ +
Sbjct: 1225 KKDSKESSVVKNVVDSSQKPTPSAREDPAPKKSSSEPPPRKPVEEKSEEGNVSAPGPESK 1284
Query: 261 VDSAPAAVKSESQ-SLPKKVSLSSDTTRKP--LEIRSPSAESKKPKWVPPAASGGSRS 315
+ PA+ KS Q S P V T P E+ + K K PP SG +S
Sbjct: 1285 QATTPASRKSSKQVSQPALVIPPQPPTTGPPRKEVPKTTPSEPKKKQPPPPESGPEQS 1342
>gi|4507241 structure specific recognition protein 1 [Homo sapiens]
Length = 709
Score = 42.4 bits (98), Expect = 6e-04
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 20/132 (15%)
Query: 188 SDGDSANDTEPDFAPGEDSEDDSD------FCESEDNDEDFSMRKSKVKEIKKKEV---- 237
S DS +T+ F PGE+ ED ++ S N+ D + K K++KK ++
Sbjct: 470 SSDDSGEETDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDR 529
Query: 238 -KVKSPVEKKEKKS----KSKCNALVTSVDSAPAAVKSESQSLPKKVSLSSDTTRKPLEI 292
K PVE K+ K K +A + ++++ +KS+ + +D ++K EI
Sbjct: 530 KSRKKPVEVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGIS-----ITDLSKKAGEI 584
Query: 293 RSPSAESKKPKW 304
++ KK +W
Sbjct: 585 WKGMSKEKKEEW 596
>gi|55769548 PHD finger protein 14 isoform 2 [Homo sapiens]
Length = 888
Score = 41.6 bits (96), Expect = 0.001
Identities = 62/258 (24%), Positives = 106/258 (41%), Gaps = 32/258 (12%)
Query: 19 SDSDDDFVSATVPLNKKSRTAPKELKQDKPKPNLNNLRKEEIPVQEKTPKKRLPEGTFS- 77
+ ++++ +S+ L K + +E + K KE+ +EK +K + T S
Sbjct: 83 NSAEEEVLSSEKQLIKMEKKEEEENGERPRKKKEKEKEKEKEKEKEKEREKEKEKATVSE 142
Query: 78 -IPASAVPCTKMALDDKLYQRDLEVALALSVKELPTVTTNVQNSQDKSIEKHGSSKIETM 136
+ ASA T +V P+V T ++++ E K
Sbjct: 143 NVAASAAATTPATSPP-------------AVNTSPSVPTTTTATEEQVSEP---KKWNLR 186
Query: 137 NKSPHISNCSVASDYLDLDKITVEDDVGGVQGKRKAASKAAAQQRKILLEGSDGDSANDT 196
P + S+ + D+D EDD K ++A+Q+ EGSDGD N+
Sbjct: 187 RNRPLLDFVSM-EELNDMDDYDSEDDNDWRPTVVKRKGRSASQK-----EGSDGD--NED 238
Query: 197 EPDFAPGEDSEDDSDFCESEDNDEDFSMRKSKVKEIKKKEVKVKSPVEKKEKKSKSKCNA 256
+ D G D ED++D E NDED S S+ KKK+ KV S +++ +
Sbjct: 239 DEDEGSGSD-EDEND----EGNDEDHSSPASE-GGCKKKKSKVLSRNSADDEELTNDSLT 292
Query: 257 LVTSVDSAPAAVKSESQS 274
L S + + + +SQ+
Sbjct: 293 LSQSKSNEDSLILEKSQN 310
Score = 34.3 bits (77), Expect = 0.17
Identities = 33/135 (24%), Positives = 55/135 (40%), Gaps = 15/135 (11%)
Query: 169 KRKAASKAAAQQRKILLEGSDGDSANDTEPDFAPGEDSEDDSDFCESEDNDEDFSMRKSK 228
KR+ AA LLE D DS++D+ DF G+ S+ + SED +D
Sbjct: 6 KRRQVKPLAAS----LLEALDYDSSDDS--DFKVGDASDSEGSGNGSEDASKDSGEGSCS 59
Query: 229 VKEIKKKEVKVKSPVEKKEKKSKSKCNALVTSVDSAPAAVKSESQSLPKKVSLSSDTTRK 288
E E ++ ++ KE++ K+ V S SE Q + + + +
Sbjct: 60 DSEENILEEELNEDIKVKEEQLKNSAEEEVLS---------SEKQLIKMEKKEEEENGER 110
Query: 289 PLEIRSPSAESKKPK 303
P + + E +K K
Sbjct: 111 PRKKKEKEKEKEKEK 125
Score = 30.0 bits (66), Expect = 3.3
Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 10/105 (9%)
Query: 194 NDTEPDFAPGEDSEDDSDFCESEDNDEDFSMRKSKVKEIKKKEVKVKSPVEKKEKKSKSK 253
N E + E + E E+N E +K K KE +K++ EK++++ K K
Sbjct: 83 NSAEEEVLSSEKQLIKMEKKEEEENGERPRKKKEKEKEKEKEK-------EKEKEREKEK 135
Query: 254 CNALVTSVDSAPAAVKSESQSLP---KKVSLSSDTTRKPLEIRSP 295
A V+ +A AA + + S P S+ + TT ++ P
Sbjct: 136 EKATVSENVAASAAATTPATSPPAVNTSPSVPTTTTATEEQVSEP 180
>gi|55769550 PHD finger protein 14 isoform 1 [Homo sapiens]
Length = 948
Score = 41.6 bits (96), Expect = 0.001
Identities = 62/258 (24%), Positives = 106/258 (41%), Gaps = 32/258 (12%)
Query: 19 SDSDDDFVSATVPLNKKSRTAPKELKQDKPKPNLNNLRKEEIPVQEKTPKKRLPEGTFS- 77
+ ++++ +S+ L K + +E + K KE+ +EK +K + T S
Sbjct: 83 NSAEEEVLSSEKQLIKMEKKEEEENGERPRKKKEKEKEKEKEKEKEKEREKEKEKATVSE 142
Query: 78 -IPASAVPCTKMALDDKLYQRDLEVALALSVKELPTVTTNVQNSQDKSIEKHGSSKIETM 136
+ ASA T +V P+V T ++++ E K
Sbjct: 143 NVAASAAATTPATSPP-------------AVNTSPSVPTTTTATEEQVSEP---KKWNLR 186
Query: 137 NKSPHISNCSVASDYLDLDKITVEDDVGGVQGKRKAASKAAAQQRKILLEGSDGDSANDT 196
P + S+ + D+D EDD K ++A+Q+ EGSDGD N+
Sbjct: 187 RNRPLLDFVSM-EELNDMDDYDSEDDNDWRPTVVKRKGRSASQK-----EGSDGD--NED 238
Query: 197 EPDFAPGEDSEDDSDFCESEDNDEDFSMRKSKVKEIKKKEVKVKSPVEKKEKKSKSKCNA 256
+ D G D ED++D E NDED S S+ KKK+ KV S +++ +
Sbjct: 239 DEDEGSGSD-EDEND----EGNDEDHSSPASE-GGCKKKKSKVLSRNSADDEELTNDSLT 292
Query: 257 LVTSVDSAPAAVKSESQS 274
L S + + + +SQ+
Sbjct: 293 LSQSKSNEDSLILEKSQN 310
Score = 34.3 bits (77), Expect = 0.17
Identities = 33/135 (24%), Positives = 55/135 (40%), Gaps = 15/135 (11%)
Query: 169 KRKAASKAAAQQRKILLEGSDGDSANDTEPDFAPGEDSEDDSDFCESEDNDEDFSMRKSK 228
KR+ AA LLE D DS++D+ DF G+ S+ + SED +D
Sbjct: 6 KRRQVKPLAAS----LLEALDYDSSDDS--DFKVGDASDSEGSGNGSEDASKDSGEGSCS 59
Query: 229 VKEIKKKEVKVKSPVEKKEKKSKSKCNALVTSVDSAPAAVKSESQSLPKKVSLSSDTTRK 288
E E ++ ++ KE++ K+ V S SE Q + + + +
Sbjct: 60 DSEENILEEELNEDIKVKEEQLKNSAEEEVLS---------SEKQLIKMEKKEEEENGER 110
Query: 289 PLEIRSPSAESKKPK 303
P + + E +K K
Sbjct: 111 PRKKKEKEKEKEKEK 125
Score = 30.0 bits (66), Expect = 3.3
Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 10/105 (9%)
Query: 194 NDTEPDFAPGEDSEDDSDFCESEDNDEDFSMRKSKVKEIKKKEVKVKSPVEKKEKKSKSK 253
N E + E + E E+N E +K K KE +K++ EK++++ K K
Sbjct: 83 NSAEEEVLSSEKQLIKMEKKEEEENGERPRKKKEKEKEKEKEK-------EKEKEREKEK 135
Query: 254 CNALVTSVDSAPAAVKSESQSLP---KKVSLSSDTTRKPLEIRSP 295
A V+ +A AA + + S P S+ + TT ++ P
Sbjct: 136 EKATVSENVAASAAATTPATSPPAVNTSPSVPTTTTATEEQVSEP 180
>gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1
[Homo sapiens]
Length = 651
Score = 41.2 bits (95), Expect = 0.001
Identities = 63/297 (21%), Positives = 111/297 (37%), Gaps = 31/297 (10%)
Query: 8 KKPVNYSQFDHSDSDDDFVSATVPLNKKSRTAPKELKQDKPKPNLNNLR-KEEIPVQEKT 66
K P+ S + S T P ++ S+T K Q K + N+ + E +
Sbjct: 160 KTPLKSSHENEQSKKSKSSSETNPESQNSKTVSKNCSQKDKKDSKNSKKTNTEFLHTKNN 219
Query: 67 PKKRLPEGTFSIPASAVPCTKMALDDKLYQRDLEVALALSVKELPTVTTNVQNSQDKSIE 126
PKK L S + C++ +L+ V S D+SI
Sbjct: 220 PKKDLKRSKTSNDPISEICSENSLNVDFLML-------------------VGQSDDESIN 260
Query: 127 KHGSSKIETMNKSPHISNCSVASDYLDLDKITVEDDVGGVQGKRKAASKAAAQQRKILLE 186
+ + N S + S L K T +D + A S+ + +K +
Sbjct: 261 FDAWLRNYSQNNSKNYS--------LKYTKYTKKDTKKNAKKSSDAESEDSKDAKKDSKK 312
Query: 187 GSDGDSANDTEPDFAPGEDSEDDSDFCESEDNDEDFSMRKSKVKEIKKKEVKVKSPVEKK 246
+D + D +S D++ +S+D +D K K+K+ KK+ K P E
Sbjct: 313 VKKNVKKDDKKKDVKKDTES-TDAESGDSKDERKDTKKDKKKLKKDDKKKDTKKYP-EST 370
Query: 247 EKKSKSKCNALVTSVDSAPAAVKSESQSLPKKVSLSSDTTRKPLEIRSPSAESKKPK 303
+ +S +A S + A+ + + KK++ S+D + LE + + KK K
Sbjct: 371 DTESGDAKDARNDSRNLKKASKNDDKKKDAKKITFSTD-SESELESKESQKDEKKDK 426
>gi|156104889 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 3 [Homo sapiens]
Length = 568
Score = 41.2 bits (95), Expect = 0.001
Identities = 68/330 (20%), Positives = 123/330 (37%), Gaps = 69/330 (20%)
Query: 7 HKKPVNYSQFDHSDSDDDFVSATVPLNKKSRTAPKELKQDKPKPNLNNLRKEEIPVQEKT 66
HK+ + +H + F + NK S+ + K+ K++KP + K +
Sbjct: 203 HKEKPSKDSREHKSA---FKEPSRDHNKSSKESSKKPKENKPLKEEKIVPKMAFKEPKPM 259
Query: 67 PKKRLPEGTFSIPASA----VPCTKMALDD------KLYQRDLEVALALSVKELP----T 112
K+ P+ S P + + D K ++ AL S P T
Sbjct: 260 SKEPKPDSNLLTITSGQDKKAPSKRPPISDSEELSAKKRKKSSSEALFKSFSSAPPLILT 319
Query: 113 VTTNVQNSQDKSIEKHGSSKIETMNKSPHISNCSVASDYLDLDKITVEDDVGGVQGKRKA 172
+ + + +DKS K G KIE+ S D +D + VE+++
Sbjct: 320 CSADKKQIKDKSHVKMGKVKIESETSEKKKSTLPPFDDIVDPNDSDVEENI--------- 370
Query: 173 ASKAAAQQRKILLEGSDGDSANDTEPDFAPGE-----------------DSEDDSDFCES 215
+SK+ ++Q S S++ + F P + D+E++SD E
Sbjct: 371 SSKSDSEQP------SPASSSSSSSSSFTPSQTRQQGPLRSIMKDLHSDDNEEESDEVED 424
Query: 216 EDNDEDFSMRKSKVKEIKKKEVKVKSPVEKKEKKSKSKCNALVTSVDSAPAAVKSESQSL 275
DND + ++ PV + S+S+ +L DS ++ S
Sbjct: 425 NDNDSE-----------------MERPVNR--GGSRSRRVSLSDGSDSESSSASSPLHHE 465
Query: 276 PKKVSLSSDTTRKPLEIRSPSAESKKPKWV 305
P L ++ + LE++SP +SK K +
Sbjct: 466 PPPPLLKTN-NNQILEVKSPIKQSKSDKQI 494
>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
Length = 2468
Score = 41.2 bits (95), Expect = 0.001
Identities = 58/257 (22%), Positives = 105/257 (40%), Gaps = 37/257 (14%)
Query: 61 PVQEKTPKKRLPEGTFSIPASAVPCTKMALDDKLYQRDLEVALALSVKELPTVTTNVQNS 120
PV ++T K+ + S+ +A P ++ + + EV V++ P V++
Sbjct: 528 PVVKQTKLKQRADSRESLKPAAKPLPSKSVRKESKEETPEVTKVNHVEKPP----KVESK 583
Query: 121 QDKSIEKHGSSKIETMNKSPHISNCSVASDYLDLDKITVEDDVGGVQG---KRKAASKAA 177
+ ++K K ET P ++ V S + V+ +V Q K KAA +
Sbjct: 584 EKVMVKKDKPIKTET---KPSVTEKEVPSKE---EPSPVKAEVAEKQATDVKPKAAKEKT 637
Query: 178 AQQRKILLEGSDGDSANDTEPDFAPGEDSEDDSDFCESEDNDEDFSMRKSKVKEIKK--- 234
++ + + + + A ED + E+ + ++K KEIKK
Sbjct: 638 VKKETKVKPEDKKEEKEKPKKEVAKKEDKTP----IKKEEKPKKEEVKKEVKKEIKKEEK 693
Query: 235 ----KEVKVKSPVEKKEKKSKSKCNALVTSVDSAPAAVKSESQSLPKKVSLSSDTTRKPL 290
KEVK ++P ++ +K+ K + V + P K E + LPK SS
Sbjct: 694 KEPKKEVKKETPPKEVKKEVKKEEKKEVKKEEKEP---KKEIKKLPKDAKKSS------- 743
Query: 291 EIRSPSAESKKPKWVPP 307
+P +E+KKP + P
Sbjct: 744 ---TPLSEAKKPAALKP 757
Score = 28.9 bits (63), Expect = 7.3
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 35 KSRTAPKELKQDKPKPNLNNLRKEEIPVQEKTPKKRLPEGTFSIPASAVPCTK 87
K T PKE+K++ K K+E+ +EK PKK + + S+ P ++
Sbjct: 701 KKETPPKEVKKEVKKE-----EKKEVKKEEKEPKKEIKKLPKDAKKSSTPLSE 748
>gi|34482047 adaptor-related protein complex 3, beta 2 subunit [Homo
sapiens]
Length = 1082
Score = 40.4 bits (93), Expect = 0.002
Identities = 27/116 (23%), Positives = 52/116 (44%)
Query: 186 EGSDGDSANDTEPDFAPGEDSEDDSDFCESEDNDEDFSMRKSKVKEIKKKEVKVKSPVEK 245
E +D D +++E D +S ES++ D+D K + E ++ E K +K
Sbjct: 689 ESADSDPESESESDSKSSSESGSGESSSESDNEDQDEDEEKGRGSESEQSEEDGKRKTKK 748
Query: 246 KEKKSKSKCNALVTSVDSAPAAVKSESQSLPKKVSLSSDTTRKPLEIRSPSAESKK 301
K + K + ++ DS+ ++ +SE S ++ L + + S SA + K
Sbjct: 749 KVPERKGEASSSDEGSDSSSSSSESEMTSESEEEQLEPASWSRKTPPSSKSAPATK 804
Score = 28.9 bits (63), Expect = 7.3
Identities = 32/138 (23%), Positives = 55/138 (39%), Gaps = 13/138 (9%)
Query: 188 SDGDSANDTEP---DFAPGEDSEDDSDFCESEDNDEDFSMRKSKVKEIKKKEVKVKSPVE 244
S+ DS + +E + + D+ED + ED ++ + +E K++ K K P
Sbjct: 699 SESDSKSSSESGSGESSSESDNED-----QDEDEEKGRGSESEQSEEDGKRKTKKKVPER 753
Query: 245 KKEKKSKSKCNALVTSVDSAPAAVKSESQSL-----PKKVSLSSDTTRKPLEIRSPSAES 299
K E S + + +S + +SE + L +K SS + EI E
Sbjct: 754 KGEASSSDEGSDSSSSSSESEMTSESEEEQLEPASWSRKTPPSSKSAPATKEISLLDLED 813
Query: 300 KKPKWVPPAASGGSRSSS 317
P V P + S+S
Sbjct: 814 FTPPSVQPVSPPAIVSTS 831
>gi|217330641 IWS1 homolog [Homo sapiens]
Length = 819
Score = 40.4 bits (93), Expect = 0.002
Identities = 49/252 (19%), Positives = 99/252 (39%), Gaps = 17/252 (6%)
Query: 35 KSRTAPKELKQDKPKPNLNNLRKEEIPVQEKTPKKR--LPEGTFSIPASAVPCTKMALDD 92
K R + E ++ PKP +++ EE P + + + LP+ S S P A D
Sbjct: 205 KPRMSDSE-SEELPKPQVSDSESEEPPRHQASDSENEELPKPRISDSESEDPPRHQASDS 263
Query: 93 KLYQRDLEVALALSVKELPTVTTNVQNSQDKSIEKHGSSKIETMNKSPHISNCSVASDYL 152
+ +ELP + S+D + S+ E + K P +S+
Sbjct: 264 EN-------------EELPKPRISDSESEDPPRNQASDSENEELPK-PRVSDSESEGPQK 309
Query: 153 DLDKITVEDDVGGVQGKRKAASKAAAQQRKILLEGSDGDSANDTEPDFAPGEDSEDDSDF 212
+ +D + K ++ + + + E + +D+ D S+ + +
Sbjct: 310 GPASDSETEDASRHKQKPESDDDSDRENKGEDTEMQNDSFHSDSHMDRKKFHSSDSEEEE 369
Query: 213 CESEDNDEDFSMRKSKVKEIKKKEVKVKSPVEKKEKKSKSKCNALVTSVDSAPAAVKSES 272
+ + D D ++ + +++ K++ V S E +EK S K + + DS AV +S
Sbjct: 370 HKKQKMDSDEDEKEGEEEKVAKRKAAVLSDSEDEEKASAKKSRVVSDADDSDSDAVSDKS 429
Query: 273 QSLPKKVSLSSD 284
K ++ S+
Sbjct: 430 GKREKTIASDSE 441
Score = 32.3 bits (72), Expect = 0.66
Identities = 46/206 (22%), Positives = 82/206 (39%), Gaps = 23/206 (11%)
Query: 120 SQDKSIEKHG----SSKIETMNKSPHISNCSVASDYLDLDKITVEDDVGGVQGKRKAASK 175
S S+E+H S + + + K H+++ S + L+L+ E + Q + S+
Sbjct: 40 SDTGSVERHSENETSDREDGLPKGHHVTD-SENDEPLNLNASDSESEELHRQKDSDSESE 98
Query: 176 AAAQQRKILLEGSD----GDSANDTEPDFAPGEDSEDDS--DFCESEDNDEDFSMRK--- 226
A+ E D G + E PG DSE++ + S+ +ED
Sbjct: 99 ERAEPPASDSENEDVNQHGSDSESEETRKLPGSDSENEELLNGHASDSENEDVGKHPASD 158
Query: 227 SKVKEIKKK-------EVKVKSPVEKKEKKSKSKCNALVTSVDSAPAA--VKSESQSLPK 277
S+++E++K E +K + E + + A + + P SES+ LPK
Sbjct: 159 SEIEELQKSPASDSETEDALKPQISDSESEEPPRHQASDSENEEPPKPRMSDSESEELPK 218
Query: 278 KVSLSSDTTRKPLEIRSPSAESKKPK 303
S++ P S S + PK
Sbjct: 219 PQVSDSESEEPPRHQASDSENEELPK 244
>gi|48255931 hepatoma-derived growth factor-related protein 2
isoform 1 [Homo sapiens]
Length = 671
Score = 40.4 bits (93), Expect = 0.002
Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 26/193 (13%)
Query: 146 SVASDYLDLDKITVED-DVGGVQGKRKAASKAAAQQRKILLEGSDGDSANDTEPDFAPGE 204
+ ASD ++ D + + D G+ KRK + + ++ SD D A+ +P E
Sbjct: 134 TAASDRMESDSDSDKSSDNSGL--KRKTPALKMSVSKRARKASSDLDQAS-----VSPSE 186
Query: 205 DSEDDSDFCESEDNDEDFSMRKSKVKEIKKKEVKVKSPV---EKKEKKSKSKCNALVTSV 261
+ +S + +D+DF+ K ++ P+ +KK+ S S ++ S
Sbjct: 187 EENSESSSESEKTSDQDFTPEKKAAVRAPRR-----GPLGGRKKKKAPSASDSDSKADSD 241
Query: 262 DSAP---AAVKSESQSLPKKVSLSSDTT-------RKPLEIRSPSAESKKPKWVPPAASG 311
+ P A +S S S S SD + RKP E P +KPK P +S
Sbjct: 242 GAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPERPPSSS 301
Query: 312 GSRSSSSPLVVVS 324
S S S + +S
Sbjct: 302 SSDSDSDEVDRIS 314
Score = 35.8 bits (81), Expect = 0.059
Identities = 52/206 (25%), Positives = 77/206 (37%), Gaps = 55/206 (26%)
Query: 188 SDGDSANDTEPD-----------FAPGEDSEDDSDFCESEDNDEDFSMRKSKVKEIKKKE 236
+DG A++ + D A + E DSD +S DN +K+K
Sbjct: 111 ADGSDADEDDEDRGVMAVTAVTATAASDRMESDSDSDKSSDNSG-----------LKRKT 159
Query: 237 VKVKSPVEKKEKKSKSKCNALVTSVDSAPAAVKSESQSLPKKVSLSSDTTRKPLEIRSP- 295
+K V K+ +K+ S + S SES S +K S T K +R+P
Sbjct: 160 PALKMSVSKRARKASSDLDQASVSPSEEE---NSESSSESEKTSDQDFTPEKKAAVRAPR 216
Query: 296 ----------------------SAESKKPKWVPPA--ASGGSRSSSSPLVVVSVKSPNQS 331
++ KP+ V A AS S SSSS VSVK P +
Sbjct: 217 RGPLGGRKKKKAPSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRG 276
Query: 332 LR-----LGLSRLARVKPLHPNATST 352
+ L R + KP P ++S+
Sbjct: 277 RKPAEKPLPKPRGRKPKPERPPSSSS 302
>gi|14249158 hepatoma-derived growth factor-related protein 2
isoform 2 [Homo sapiens]
Length = 670
Score = 40.4 bits (93), Expect = 0.002
Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 26/193 (13%)
Query: 146 SVASDYLDLDKITVED-DVGGVQGKRKAASKAAAQQRKILLEGSDGDSANDTEPDFAPGE 204
+ ASD ++ D + + D G+ KRK + + ++ SD D A+ +P E
Sbjct: 134 TAASDRMESDSDSDKSSDNSGL--KRKTPALKMSVSKRARKASSDLDQAS-----VSPSE 186
Query: 205 DSEDDSDFCESEDNDEDFSMRKSKVKEIKKKEVKVKSPV---EKKEKKSKSKCNALVTSV 261
+ +S + +D+DF+ K ++ P+ +KK+ S S ++ S
Sbjct: 187 EENSESSSESEKTSDQDFTPEKKAAVRAPRR-----GPLGGRKKKKAPSASDSDSKADSD 241
Query: 262 DSAP---AAVKSESQSLPKKVSLSSDTT-------RKPLEIRSPSAESKKPKWVPPAASG 311
+ P A +S S S S SD + RKP E P +KPK P +S
Sbjct: 242 GAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPLPKPRGRKPKPERPPSSS 301
Query: 312 GSRSSSSPLVVVS 324
S S S + +S
Sbjct: 302 SSDSDSDEVDRIS 314
Score = 35.8 bits (81), Expect = 0.059
Identities = 52/206 (25%), Positives = 77/206 (37%), Gaps = 55/206 (26%)
Query: 188 SDGDSANDTEPD-----------FAPGEDSEDDSDFCESEDNDEDFSMRKSKVKEIKKKE 236
+DG A++ + D A + E DSD +S DN +K+K
Sbjct: 111 ADGSDADEDDEDRGVMAVTAVTATAASDRMESDSDSDKSSDNSG-----------LKRKT 159
Query: 237 VKVKSPVEKKEKKSKSKCNALVTSVDSAPAAVKSESQSLPKKVSLSSDTTRKPLEIRSP- 295
+K V K+ +K+ S + S SES S +K S T K +R+P
Sbjct: 160 PALKMSVSKRARKASSDLDQASVSPSEEE---NSESSSESEKTSDQDFTPEKKAAVRAPR 216
Query: 296 ----------------------SAESKKPKWVPPA--ASGGSRSSSSPLVVVSVKSPNQS 331
++ KP+ V A AS S SSSS VSVK P +
Sbjct: 217 RGPLGGRKKKKAPSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRG 276
Query: 332 LR-----LGLSRLARVKPLHPNATST 352
+ L R + KP P ++S+
Sbjct: 277 RKPAEKPLPKPRGRKPKPERPPSSSS 302
>gi|27734775 hypothetical protein LOC286499 [Homo sapiens]
Length = 248
Score = 40.4 bits (93), Expect = 0.002
Identities = 42/168 (25%), Positives = 67/168 (39%), Gaps = 3/168 (1%)
Query: 150 DYLDLDKITVEDDVGGVQGKRKAASKAAAQQRKILLEGSDGDSANDTEPDFAPGEDSEDD 209
DYL+ + T E+ ++ K K SKA A+ + + E + E + E S
Sbjct: 32 DYLNRPRPTWEEVKKQLENK-KTGSKALAEFEEKMNENWKKELEKSREKLLSGNESSSKK 90
Query: 210 SDFCESEDNDEDFSMRKSKVKEIKKKEVKVKSPVEKKEKKSKSKCNALVTSVDSAPAAVK 269
+ + S S + + +K+ K+ K K N S S+ +
Sbjct: 91 RERKKKRKKKSCRSSSSSSSSDSSSSSSDSEDEEKKQGKRRKKKKNRSYKSSQSSTHESE 150
Query: 270 SESQSLPKKVSLSSDTTRKPLEIRSPSAESKK--PKWVPPAASGGSRS 315
SES+ KK S D T K ++RS S + KK P P ++ S S
Sbjct: 151 SESKESVKKKKKSKDETEKEKDVRSLSKKRKKSYPDDKPLSSESSSES 198
Score = 29.6 bits (65), Expect = 4.3
Identities = 38/139 (27%), Positives = 56/139 (40%), Gaps = 23/139 (16%)
Query: 118 QNSQDKSIEKHGSSKIETMNKSPHISNC----SVASDYLDLDKITVEDDVGGVQGKRKAA 173
+ Q K +K + ++ S H S SV D+ E DV + KRK
Sbjct: 124 EKKQGKRRKKKKNRSYKSSQSSTHESESESKESVKKKKKSKDETEKEKDVRSLSKKRK-- 181
Query: 174 SKAAAQQRKILLEGSDGDSANDTEPDFAPGEDSEDDSDFCESEDNDEDFSMRKSKVKEIK 233
K+ + + S+ S +D E D + CE + K KVK+ K
Sbjct: 182 -KSYPDDKPL---SSESSSESDYEEDVQAKKKRR-----CEEREQ------AKEKVKKKK 226
Query: 234 KKEVKVKSPVEKKEKKSKS 252
KK+ K S +KK+KKS S
Sbjct: 227 KKQHKKHS--KKKKKKSGS 243
>gi|192807336 arsenate resistance protein 2 isoform e [Homo sapiens]
Length = 871
Score = 40.0 bits (92), Expect = 0.003
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 6/135 (4%)
Query: 186 EGSDGDSANDTEPDFAPGEDSEDDSDFCESEDNDEDFSMRKSKVKEIKKKEVKVKSPVEK 245
EG G D E ++ ++D E++ +++D K+K E + + K EK
Sbjct: 288 EGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDD----KTKKSEGDGDKEEKKEDSEK 343
Query: 246 KEKKSKSKCNALVTSVDSAPAAVKSESQSLPKKVSLSSDTTRKPLEIRSPSAESKKPKWV 305
+ KKS K N + DS SES+S + S ++ ++ E + K+ +W
Sbjct: 344 EAKKSSKKRNRKHSGDDSFDEGSVSESES--ESESGQAEEEKEEAEALKEKEKPKEEEWE 401
Query: 306 PPAASGGSRSSSSPL 320
P + G PL
Sbjct: 402 KPKDAAGLECKPRPL 416
>gi|192807332 arsenate resistance protein 2 isoform c [Homo sapiens]
Length = 875
Score = 40.0 bits (92), Expect = 0.003
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 6/135 (4%)
Query: 186 EGSDGDSANDTEPDFAPGEDSEDDSDFCESEDNDEDFSMRKSKVKEIKKKEVKVKSPVEK 245
EG G D E ++ ++D E++ +++D K+K E + + K EK
Sbjct: 288 EGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDD----KTKKSEGDGDKEEKKEDSEK 343
Query: 246 KEKKSKSKCNALVTSVDSAPAAVKSESQSLPKKVSLSSDTTRKPLEIRSPSAESKKPKWV 305
+ KKS K N + DS SES+S + S ++ ++ E + K+ +W
Sbjct: 344 EAKKSSKKRNRKHSGDDSFDEGSVSESES--ESESGQAEEEKEEAEALKEKEKPKEEEWE 401
Query: 306 PPAASGGSRSSSSPL 320
P + G PL
Sbjct: 402 KPKDAAGLECKPRPL 416
>gi|157266334 tubby like protein 1 [Homo sapiens]
Length = 542
Score = 40.0 bits (92), Expect = 0.003
Identities = 30/131 (22%), Positives = 61/131 (46%), Gaps = 9/131 (6%)
Query: 201 APGEDSEDDSDFCESEDNDEDFSMRKSKVKEIKKKEVKVKSPVEKKEKKSKSK-CNALVT 259
AP + E++ + + ED +E+ +K K+ KK ++ KS + KE+++K++ +
Sbjct: 111 APDAEDEEEEEEEDEEDEEEEAEEKKEKILLPPKKPLREKSSADLKERRAKAQGPRGDLG 170
Query: 260 SVDSAPAAVKSESQSLPKKVSLSSDTTRKPLEIRSPSAESKKPKWVPPAASGGSRSSSSP 319
S D P ++ ++ P T+K S E+ K P + +R S +
Sbjct: 171 SPDPPPKPLRVRNKEAPAGEGTKMRKTKK-----KGSGEADKD---PSGSPASARKSPAA 222
Query: 320 LVVVSVKSPNQ 330
+ +V SP++
Sbjct: 223 MFLVGEGSPDK 233
>gi|192807334 arsenate resistance protein 2 isoform d [Homo sapiens]
Length = 872
Score = 39.7 bits (91), Expect = 0.004
Identities = 37/138 (26%), Positives = 55/138 (39%), Gaps = 11/138 (7%)
Query: 186 EGSDGDSANDTEPDFAPGEDSEDDSDFCESEDNDEDFSMRKSKVKEIKKKEVKVKSPVEK 245
EG G D E ++ ++D E++ +++D K+K E + + K EK
Sbjct: 288 EGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDD----KTKKSEGDGDKEEKKEDSEK 343
Query: 246 KEKKSKSKCNALVTSVDSAPAAVKSESQSLPKKVSLSSDTTRKPLEIRSPSAESKKPK-- 303
+ KKS K N + DS SES+S S S + E E +KPK
Sbjct: 344 EAKKSSKKRNRKHSGDDSFDEGSVSESES----ESESGQAEEEKEEAEEALKEKEKPKEE 399
Query: 304 -WVPPAASGGSRSSSSPL 320
W P + G PL
Sbjct: 400 EWEKPKDAAGLECKPRPL 417
>gi|58331218 arsenate resistance protein 2 isoform a [Homo sapiens]
Length = 876
Score = 39.7 bits (91), Expect = 0.004
Identities = 37/138 (26%), Positives = 55/138 (39%), Gaps = 11/138 (7%)
Query: 186 EGSDGDSANDTEPDFAPGEDSEDDSDFCESEDNDEDFSMRKSKVKEIKKKEVKVKSPVEK 245
EG G D E ++ ++D E++ +++D K+K E + + K EK
Sbjct: 288 EGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDD----KTKKSEGDGDKEEKKEDSEK 343
Query: 246 KEKKSKSKCNALVTSVDSAPAAVKSESQSLPKKVSLSSDTTRKPLEIRSPSAESKKPK-- 303
+ KKS K N + DS SES+S S S + E E +KPK
Sbjct: 344 EAKKSSKKRNRKHSGDDSFDEGSVSESES----ESESGQAEEEKEEAEEALKEKEKPKEE 399
Query: 304 -WVPPAASGGSRSSSSPL 320
W P + G PL
Sbjct: 400 EWEKPKDAAGLECKPRPL 417
>gi|55956788 nucleolin [Homo sapiens]
Length = 710
Score = 39.3 bits (90), Expect = 0.005
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 160 EDDVGGVQGKRKAASKAAAQQRKILLEGSDGDSANDTEPDFAPGEDSEDDSDFCESEDND 219
E+ + K K A+K + K + E D + ++ E D +D EDD D + +D +
Sbjct: 208 EEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDD----DDDEDDEDDDDEDDEE 263
Query: 220 EDFSMRKSKVKEI----KKKEVKVKSPVEKKEKK 249
E+ + VKE KK+ K K+ E K++K
Sbjct: 264 EEEEEEEEPVKEAPGKRKKEMAKQKAAPEAKKQK 297
Score = 33.1 bits (74), Expect = 0.38
Identities = 28/113 (24%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
Query: 168 GKRKAA--SKAAAQQRKILLEGSDGDSANDTEPDFAPGEDSEDDSDFCESEDNDEDFSMR 225
GK+ AA +K A + E SD + +D+E ED EDD D E ED E +M+
Sbjct: 123 GKKGAAIPAKGAKNGKNAKKEDSDEEEDDDSE------EDEEDDEDEDEDEDEIEPAAMK 176
Query: 226 KSKVKEIKKKEVKVKSPVEKKEKKSKSKCNALVTSVDSAPAAVKSESQSLPKK 278
+ + E + + ++ + ++ ++++ PA K ++ +P K
Sbjct: 177 AAAAAPASEDE-DDEDDEDDEDDDDDEEDDSEEEAMETTPAKGKKAAKVVPVK 228
Score = 30.8 bits (68), Expect = 1.9
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Query: 157 ITVEDDVGGVQGKRKAAS---KAAAQQRKILLEGSDGDSANDTEPDFAPGEDSEDDSDFC 213
+T G GK A+ K AA K +G +A + D +DSE+D +
Sbjct: 104 VTTPGKKGATPGKALVATPGKKGAAIPAK---GAKNGKNAKKEDSDEEEDDDSEEDEEDD 160
Query: 214 ESEDNDED 221
E ED DED
Sbjct: 161 EDEDEDED 168
Score = 28.5 bits (62), Expect = 9.5
Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Query: 190 GDSANDTEPDFAPGEDSEDDSDFCESEDNDEDFSMRKSKVKEIKKKEVKVKSPVEKKEKK 249
G + D + P ++ E+DS+ E +++ED S + V +KK K + KK
Sbjct: 8 GKNQGDPKKMAPPPKEVEEDSEDEEMSEDEEDDSSGEEVVIP-QKKGKKAAATSAKKVVV 66
Query: 250 SKSKCNALVTSVDSAPAAVKSESQSLPKKVSLS 282
S +K A+ T A ++ + P K +++
Sbjct: 67 SPTKKVAVATPAKKAAVTPGKKAAATPAKKTVT 99
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.305 0.122 0.331
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,830,286
Number of Sequences: 37866
Number of extensions: 664715
Number of successful extensions: 5267
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 377
Number of HSP's that attempted gapping in prelim test: 3626
Number of HSP's gapped (non-prelim): 1493
length of query: 352
length of database: 18,247,518
effective HSP length: 103
effective length of query: 249
effective length of database: 14,347,320
effective search space: 3572482680
effective search space used: 3572482680
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.