Search of human proteins with 195927056

Search of human proteins with 195927056

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|195927056 alkB, alkylation repair homolog 8 [Homo sapiens]
         (664 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|195927056 alkB, alkylation repair homolog 8 [Homo sapiens]        1355   0.0  
gi|169162451 PREDICTED: hypothetical protein [Homo sapiens]           317   3e-86
gi|169161936 PREDICTED: hypothetical protein [Homo sapiens]           317   3e-86
gi|169162699 PREDICTED: hypothetical protein [Homo sapiens]           317   3e-86
gi|153251913 hypothetical protein LOC57604 isoform 1 [Homo sapiens]   160   5e-39
gi|109148544 alkB, alkylation repair homolog 6 isoform 2 [Homo s...    61   3e-09
gi|153251916 hypothetical protein LOC57604 isoform 2 [Homo sapiens]    55   2e-07
gi|8923019 alkB, alkylation repair homolog 4 [Homo sapiens]            45   2e-04
gi|77695912 TIA-1 related protein isoform 2 [Homo sapiens]             36   0.100
gi|4507499 TIA-1 related protein isoform 1 [Homo sapiens]              36   0.100
gi|23199995 Williams Beuren syndrome chromosome region 22 protei...    36   0.100
gi|89145417 methyltransferase like 7A [Homo sapiens]                   35   0.17 
gi|148539642 alkB, alkylation repair homolog 5 [Homo sapiens]          35   0.22 
gi|93141204 methyltransferase like 2B [Homo sapiens]                   34   0.38 
gi|20911035 peptidylprolyl isomerase-like 4 [Homo sapiens]             34   0.38 
gi|188219593 TIA1 protein isoform 1 [Homo sapiens]                     34   0.49 
gi|188219591 TIA1 protein isoform 2 [Homo sapiens]                     34   0.49 
gi|165932358 methyltransferase like 2A [Homo sapiens]                  34   0.49 
gi|20357575 apobec-1 complementation factor isoform 2 [Homo sapi...    33   0.84 
gi|20357572 apobec-1 complementation factor isoform 1 [Homo sapi...    33   0.84 
gi|38570140 alkB, alkylation repair homolog 6 isoform 1 [Homo sa...    33   1.1  
gi|18201888 poly(A) binding protein, cytoplasmic 5 [Homo sapiens]      32   1.9  
gi|100913204 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso...    32   1.9  
gi|100913202 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso...    32   1.9  
gi|132566527 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso...    32   1.9  
gi|225579095 S-phase cyclin A-associated protein in the ER isofo...    32   2.5  
gi|225579092 S-phase cyclin A-associated protein in the ER isofo...    32   2.5  
gi|30795242 aryl hydrocarbon receptor nuclear translocator isofo...    31   3.2  
gi|4502231 aryl hydrocarbon receptor nuclear translocator isofor...    31   3.2  
gi|5902104 SRY (sex determining region Y)-box 10 [Homo sapiens]        31   4.2  

>gi|195927056 alkB, alkylation repair homolog 8 [Homo sapiens]
          Length = 664

 Score = 1355 bits (3507), Expect = 0.0
 Identities = 664/664 (100%), Positives = 664/664 (100%)

Query: 1   MDSNHQSNYKLSKTEKKFLRKQIKAKHTLLRHEGIETVSYATQSLVVANGGLGNGVSRNQ 60
           MDSNHQSNYKLSKTEKKFLRKQIKAKHTLLRHEGIETVSYATQSLVVANGGLGNGVSRNQ
Sbjct: 1   MDSNHQSNYKLSKTEKKFLRKQIKAKHTLLRHEGIETVSYATQSLVVANGGLGNGVSRNQ 60

Query: 61  LLPVLEKCGLVDALLMPPNKPYSFARYRTTEESKRAYVTLNGKEVVDDLGQKITLYLNFV 120
           LLPVLEKCGLVDALLMPPNKPYSFARYRTTEESKRAYVTLNGKEVVDDLGQKITLYLNFV
Sbjct: 61  LLPVLEKCGLVDALLMPPNKPYSFARYRTTEESKRAYVTLNGKEVVDDLGQKITLYLNFV 120

Query: 121 EKVQWKELRPQALPPGLMVVEEIISSEEEKMLLESVDWTEDTDNQNSQKSLKHRRVKHFG 180
           EKVQWKELRPQALPPGLMVVEEIISSEEEKMLLESVDWTEDTDNQNSQKSLKHRRVKHFG
Sbjct: 121 EKVQWKELRPQALPPGLMVVEEIISSEEEKMLLESVDWTEDTDNQNSQKSLKHRRVKHFG 180

Query: 181 YEFHYENNNVDKDKPLSGGLPDICESFLEKWLRKGYIKHKPDQMTINQYEPGQGIPAHID 240
           YEFHYENNNVDKDKPLSGGLPDICESFLEKWLRKGYIKHKPDQMTINQYEPGQGIPAHID
Sbjct: 181 YEFHYENNNVDKDKPLSGGLPDICESFLEKWLRKGYIKHKPDQMTINQYEPGQGIPAHID 240

Query: 241 THSAFEDEIVSLSLGSEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTHGITCRKFD 300
           THSAFEDEIVSLSLGSEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTHGITCRKFD
Sbjct: 241 THSAFEDEIVSLSLGSEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTHGITCRKFD 300

Query: 301 TVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQTPCNCSYPLVCDSQRKETPPSF 360
           TVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQTPCNCSYPLVCDSQRKETPPSF
Sbjct: 301 TVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQTPCNCSYPLVCDSQRKETPPSF 360

Query: 361 PESDKEASRLEQEYVHQVYEEIAGHFSSTRHTPWPHIVEFLKALPSGSIVADIGCGNGKY 420
           PESDKEASRLEQEYVHQVYEEIAGHFSSTRHTPWPHIVEFLKALPSGSIVADIGCGNGKY
Sbjct: 361 PESDKEASRLEQEYVHQVYEEIAGHFSSTRHTPWPHIVEFLKALPSGSIVADIGCGNGKY 420

Query: 421 LGINKELYMIGCDRSQNLVDICRERQFQAFVCDALAVPVRSGSCDACISIAVIHHFATAE 480
           LGINKELYMIGCDRSQNLVDICRERQFQAFVCDALAVPVRSGSCDACISIAVIHHFATAE
Sbjct: 421 LGINKELYMIGCDRSQNLVDICRERQFQAFVCDALAVPVRSGSCDACISIAVIHHFATAE 480

Query: 481 RRVAALQEIVRLLRPGGKALIYVWAMEQEYNKQKSKYLRGNRNSQGKKEEMNSDTSVQRS 540
           RRVAALQEIVRLLRPGGKALIYVWAMEQEYNKQKSKYLRGNRNSQGKKEEMNSDTSVQRS
Sbjct: 481 RRVAALQEIVRLLRPGGKALIYVWAMEQEYNKQKSKYLRGNRNSQGKKEEMNSDTSVQRS 540

Query: 541 LVEQMRDMGSRDSASSVPRINDSQEGGCNSRQVSNSKLPVHVNRTSFYSQDVLVPWHLKG 600
           LVEQMRDMGSRDSASSVPRINDSQEGGCNSRQVSNSKLPVHVNRTSFYSQDVLVPWHLKG
Sbjct: 541 LVEQMRDMGSRDSASSVPRINDSQEGGCNSRQVSNSKLPVHVNRTSFYSQDVLVPWHLKG 600

Query: 601 NPDKGKPVEPFGPIGSQDPSPVFHRYYHVFREGELEGACRTVSDVRILQSYYDQGNWCVI 660
           NPDKGKPVEPFGPIGSQDPSPVFHRYYHVFREGELEGACRTVSDVRILQSYYDQGNWCVI
Sbjct: 601 NPDKGKPVEPFGPIGSQDPSPVFHRYYHVFREGELEGACRTVSDVRILQSYYDQGNWCVI 660

Query: 661 LQKA 664
           LQKA
Sbjct: 661 LQKA 664


>gi|169162451 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 220

 Score =  317 bits (811), Expect = 3e-86
 Identities = 156/195 (80%), Positives = 173/195 (88%)

Query: 38  VSYATQSLVVANGGLGNGVSRNQLLPVLEKCGLVDALLMPPNKPYSFARYRTTEESKRAY 97
           +S   + LVVA+ GLGNGVSRNQLL VLEKCGLVDALLMPP KPYSF RY+TTEESKRAY
Sbjct: 20  LSAEEERLVVASVGLGNGVSRNQLLLVLEKCGLVDALLMPPYKPYSFERYKTTEESKRAY 79

Query: 98  VTLNGKEVVDDLGQKITLYLNFVEKVQWKELRPQALPPGLMVVEEIISSEEEKMLLESVD 157
           VTLNGKE+VDDLGQK+ LYLNFVEK QWKEL PQALP  L+VVEEIIS+E+EK+LLESVD
Sbjct: 80  VTLNGKEIVDDLGQKMILYLNFVEKAQWKELGPQALPLVLIVVEEIISTEDEKILLESVD 139

Query: 158 WTEDTDNQNSQKSLKHRRVKHFGYEFHYENNNVDKDKPLSGGLPDICESFLEKWLRKGYI 217
            T+DTD+QN QK LKHRRVKHFGYEFH E NNVDKDK L  GL D+C+SFLEKWLR+GYI
Sbjct: 140 QTKDTDHQNFQKCLKHRRVKHFGYEFHCEKNNVDKDKHLPRGLLDVCDSFLEKWLREGYI 199

Query: 218 KHKPDQMTINQYEPG 232
           KHKP+Q+TINQYEPG
Sbjct: 200 KHKPEQLTINQYEPG 214


>gi|169161936 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 220

 Score =  317 bits (811), Expect = 3e-86
 Identities = 156/195 (80%), Positives = 173/195 (88%)

Query: 38  VSYATQSLVVANGGLGNGVSRNQLLPVLEKCGLVDALLMPPNKPYSFARYRTTEESKRAY 97
           +S   + LVVA+ GLGNGVSRNQLL VLEKCGLVDALLMPP KPYSF RY+TTEESKRAY
Sbjct: 20  LSAEEERLVVASVGLGNGVSRNQLLLVLEKCGLVDALLMPPYKPYSFERYKTTEESKRAY 79

Query: 98  VTLNGKEVVDDLGQKITLYLNFVEKVQWKELRPQALPPGLMVVEEIISSEEEKMLLESVD 157
           VTLNGKE+VDDLGQK+ LYLNFVEK QWKEL PQALP  L+VVEEIIS+E+EK+LLESVD
Sbjct: 80  VTLNGKEIVDDLGQKMILYLNFVEKAQWKELGPQALPLVLIVVEEIISTEDEKILLESVD 139

Query: 158 WTEDTDNQNSQKSLKHRRVKHFGYEFHYENNNVDKDKPLSGGLPDICESFLEKWLRKGYI 217
            T+DTD+QN QK LKHRRVKHFGYEFH E NNVDKDK L  GL D+C+SFLEKWLR+GYI
Sbjct: 140 QTKDTDHQNFQKCLKHRRVKHFGYEFHCEKNNVDKDKHLPRGLLDVCDSFLEKWLREGYI 199

Query: 218 KHKPDQMTINQYEPG 232
           KHKP+Q+TINQYEPG
Sbjct: 200 KHKPEQLTINQYEPG 214


>gi|169162699 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 220

 Score =  317 bits (811), Expect = 3e-86
 Identities = 156/195 (80%), Positives = 173/195 (88%)

Query: 38  VSYATQSLVVANGGLGNGVSRNQLLPVLEKCGLVDALLMPPNKPYSFARYRTTEESKRAY 97
           +S   + LVVA+ GLGNGVSRNQLL VLEKCGLVDALLMPP KPYSF RY+TTEESKRAY
Sbjct: 20  LSAEEERLVVASVGLGNGVSRNQLLLVLEKCGLVDALLMPPYKPYSFERYKTTEESKRAY 79

Query: 98  VTLNGKEVVDDLGQKITLYLNFVEKVQWKELRPQALPPGLMVVEEIISSEEEKMLLESVD 157
           VTLNGKE+VDDLGQK+ LYLNFVEK QWKEL PQALP  L+VVEEIIS+E+EK+LLESVD
Sbjct: 80  VTLNGKEIVDDLGQKMILYLNFVEKAQWKELGPQALPLVLIVVEEIISTEDEKILLESVD 139

Query: 158 WTEDTDNQNSQKSLKHRRVKHFGYEFHYENNNVDKDKPLSGGLPDICESFLEKWLRKGYI 217
            T+DTD+QN QK LKHRRVKHFGYEFH E NNVDKDK L  GL D+C+SFLEKWLR+GYI
Sbjct: 140 QTKDTDHQNFQKCLKHRRVKHFGYEFHCEKNNVDKDKHLPRGLLDVCDSFLEKWLREGYI 199

Query: 218 KHKPDQMTINQYEPG 232
           KHKP+Q+TINQYEPG
Sbjct: 200 KHKPEQLTINQYEPG 214


>gi|153251913 hypothetical protein LOC57604 isoform 1 [Homo sapiens]
          Length = 454

 Score =  160 bits (404), Expect = 5e-39
 Identities = 73/146 (50%), Positives = 103/146 (70%)

Query: 364 DKEASRLEQEYVHQVYEEIAGHFSSTRHTPWPHIVEFLKALPSGSIVADIGCGNGKYLGI 423
           D EA++LE+++VH VYE  A +FS  +   WP + +FL+    GS++ADIGCG GKYL +
Sbjct: 2   DHEAAQLEKQHVHNVYESTAPYFSDLQSKAWPRVRQFLQEQKPGSLIADIGCGTGKYLKV 61

Query: 424 NKELYMIGCDRSQNLVDICRERQFQAFVCDALAVPVRSGSCDACISIAVIHHFATAERRV 483
           N +++ +GCD    LV+I R R  +A VCD L +P R    DA ISI VIHHF+T +RR+
Sbjct: 62  NSQVHTVGCDYCGPLVEIARNRGCEAMVCDNLNLPFRDEGFDAIISIGVIHHFSTKQRRI 121

Query: 484 AALQEIVRLLRPGGKALIYVWAMEQE 509
            A++E+ R+L PGG+ +IYVWAMEQ+
Sbjct: 122 RAIKEMARVLVPGGQLMIYVWAMEQK 147



 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 32/64 (50%), Positives = 37/64 (57%), Gaps = 3/64 (4%)

Query: 601 NPDKGKPVEPFGPIGSQDPSPVFHRYYHVFREGELEGACR-TVSDVRILQSYYDQGNWCV 659
           NPD    VE   P      S  F RYYHVFREGEL    +  VS++RIL S  D GNWC+
Sbjct: 388 NPDDTMSVED--PQTDVLDSTAFMRYYHVFREGELCSLLKENVSELRILSSGNDHGNWCI 445

Query: 660 ILQK 663
           I +K
Sbjct: 446 IAEK 449


>gi|109148544 alkB, alkylation repair homolog 6 isoform 2 [Homo
           sapiens]
          Length = 266

 Score = 61.2 bits (147), Expect = 3e-09
 Identities = 62/230 (26%), Positives = 94/230 (40%), Gaps = 40/230 (17%)

Query: 129 RPQALPPGLMVVEEIISSEEEKMLLESV------DWTEDTDNQNSQKSLKHRRVKHFGYE 182
           R +  PP +  V + IS EEE+ LL  V       WT+          L  R+++++G  
Sbjct: 43  RVEQAPPVIYYVPDFISKEEEEYLLRQVFNAPKPKWTQ----------LSGRKLQNWGGL 92

Query: 183 FHYENNNVDKDKPLSGGLPDICESFLEKWLRKGYIKHKP-DQMTINQYEPGQGIPAHIDT 241
            H      ++       LP   + +++K          P + + +NQY PG+GI  H D 
Sbjct: 93  PHPRGMVPER-------LPPWLQRYVDKVSNLSLFGGLPANHVLVNQYLPGEGIMPHEDG 145

Query: 242 HSAFEDEIVSLSLGSEIVMDFKHP------DGIAVPVMLPR---------RSLLVMTGES 286
              +   + ++SLGS  V+DF  P      D    P   PR         RSLLV+ G +
Sbjct: 146 -PLYYPTVSTISLGSHTVLDFYEPRRPEDDDPTEQPRPPPRPTTSLLLEPRSLLVLRGPA 204

Query: 287 RYLWTHGITCRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKV 336
                HGI   + D + A+ S  +              RG R S T R+V
Sbjct: 205 YTRLLHGIAAARVDALDAASSPPNAAACPSARPGACLVRGTRVSLTIRRV 254


>gi|153251916 hypothetical protein LOC57604 isoform 2 [Homo sapiens]
          Length = 328

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 32/64 (50%), Positives = 37/64 (57%), Gaps = 3/64 (4%)

Query: 601 NPDKGKPVEPFGPIGSQDPSPVFHRYYHVFREGELEGACR-TVSDVRILQSYYDQGNWCV 659
           NPD    VE   P      S  F RYYHVFREGEL    +  VS++RIL S  D GNWC+
Sbjct: 262 NPDDTMSVED--PQTDVLDSTAFMRYYHVFREGELCSLLKENVSELRILSSGNDHGNWCI 319

Query: 660 ILQK 663
           I +K
Sbjct: 320 IAEK 323



 Score = 33.5 bits (75), Expect = 0.65
 Identities = 13/21 (61%), Positives = 18/21 (85%)

Query: 489 IVRLLRPGGKALIYVWAMEQE 509
           + R+L PGG+ +IYVWAMEQ+
Sbjct: 1   MARVLVPGGQLMIYVWAMEQK 21


>gi|8923019 alkB, alkylation repair homolog 4 [Homo sapiens]
          Length = 302

 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 47/200 (23%), Positives = 80/200 (40%), Gaps = 42/200 (21%)

Query: 135 PGLMVVEEIISSEEEKMLLESVDWTEDTDNQNSQKSLKHRRVKHFGYEFHYENNNVDKDK 194
           PG+M++E+ ++ EEE  L+  +      D    + S   RR + +G + ++    +  + 
Sbjct: 71  PGVMLIEDFVTREEEAELVRLM------DRDPWKLSQSGRRKQDYGPKVNFRKQKLKTEG 124

Query: 195 PLSGGLPDICESFLEKW-LRKGYIKHKPDQMTINQY--EPGQGIPAHIDTHSAFEDEIVS 251
               GLP      + +  L  G    +P +     Y  E G  I  H+D    + + +VS
Sbjct: 125 --FCGLPSFSREVVRRMGLYPGLEGFRPVEQCNLDYCPERGSAIDPHLDDAWLWGERLVS 182

Query: 252 LSLGSEIVMDF-KHPDG------------------------------IAVPVMLPRRSLL 280
           L+L S  V+   +   G                              + V + LP RSLL
Sbjct: 183 LNLLSPTVLSMCREAPGSLLLCSAPSAAPEALVDSVIAPSRSVLCQEVEVAIPLPARSLL 242

Query: 281 VMTGESRYLWTHGITCRKFD 300
           V+TG +R+ W H I  R  +
Sbjct: 243 VLTGAARHQWKHAIHRRHIE 262


>gi|77695912 TIA-1 related protein isoform 2 [Homo sapiens]
          Length = 392

 Score = 36.2 bits (82), Expect = 0.100
 Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 1/76 (1%)

Query: 30  LRHEGIETVSYATQSLVVANGGLGNGVSRNQLLPVLEKCGLVDALLMPPNKPYSFARYRT 89
           LR E +   S + ++  V  GG+ +G++   +       G +  + + P K YSF R+ T
Sbjct: 208 LRFEDVVNQS-SPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFST 266

Query: 90  TEESKRAYVTLNGKEV 105
            E +  A V++NG  +
Sbjct: 267 HESAAHAIVSVNGTTI 282


>gi|4507499 TIA-1 related protein isoform 1 [Homo sapiens]
          Length = 375

 Score = 36.2 bits (82), Expect = 0.100
 Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 1/76 (1%)

Query: 30  LRHEGIETVSYATQSLVVANGGLGNGVSRNQLLPVLEKCGLVDALLMPPNKPYSFARYRT 89
           LR E +   S + ++  V  GG+ +G++   +       G +  + + P K YSF R+ T
Sbjct: 191 LRFEDVVNQS-SPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFST 249

Query: 90  TEESKRAYVTLNGKEV 105
            E +  A V++NG  +
Sbjct: 250 HESAAHAIVSVNGTTI 265


>gi|23199995 Williams Beuren syndrome chromosome region 22 protein
           [Homo sapiens]
          Length = 281

 Score = 36.2 bits (82), Expect = 0.100
 Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 7/77 (9%)

Query: 412 DIGCG---NGKYLGINKELYMIGCDRSQNLVDICRERQFQAFVC---DALAVPVRSGSCD 465
           DIGCG   +G YL  ++  Y +G D S  ++D   +R+ +  +        +P + G+ D
Sbjct: 59  DIGCGTGLSGSYLS-DEGHYWVGLDISPAMLDEAVDREIEGDLLLGDMGQGIPFKPGTFD 117

Query: 466 ACISIAVIHHFATAERR 482
            CISI+ +     A ++
Sbjct: 118 GCISISAVQWLCNANKK 134


>gi|89145417 methyltransferase like 7A [Homo sapiens]
          Length = 244

 Score = 35.4 bits (80), Expect = 0.17
 Identities = 40/135 (29%), Positives = 58/135 (42%), Gaps = 27/135 (20%)

Query: 378 VYEEIAGHFSSTRHTPWPHIVEFLKALPSGSI-VADIGCGNGKYLGINKELYMIGC---- 432
           +Y E     +S +   + ++ EF  A PSG + + ++GCG G     N + Y  GC    
Sbjct: 46  IYNE---QMASKKRELFSNLQEF--AGPSGKLSLLEVGCGTGA----NFKFYPPGCRVTC 96

Query: 433 -DRSQNLVDIC-------RERQFQAFVCDA--LAVPVRSGSCDACISIAVIHHFATAERR 482
            D + N            R  QF+ FV  A      V  GS D  +   V+      ER 
Sbjct: 97  IDPNPNFEKFLIKSIAENRHLQFERFVVAAGENMHQVADGSVDVVVCTLVLCSVKNQER- 155

Query: 483 VAALQEIVRLLRPGG 497
              L+E+ R+LRPGG
Sbjct: 156 --ILREVCRVLRPGG 168


>gi|148539642 alkB, alkylation repair homolog 5 [Homo sapiens]
          Length = 394

 Score = 35.0 bits (79), Expect = 0.22
 Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 8/77 (10%)

Query: 226 INQYEPGQGIPAHIDTHSAFEDEIVSLSLGSEIVMDFK-----HPDGIAVPVM-LP--RR 277
           IN Y+PG  I +H+D    FE  IVS+S  S+  + F       P  ++ PV+ LP  R 
Sbjct: 192 INDYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFQFKPIRVSEPVLSLPVRRG 251

Query: 278 SLLVMTGESRYLWTHGI 294
           S+ V++G +    TH I
Sbjct: 252 SVTVLSGYAADEITHCI 268


>gi|93141204 methyltransferase like 2B [Homo sapiens]
          Length = 378

 Score = 34.3 bits (77), Expect = 0.38
 Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 17/108 (15%)

Query: 410 VADIGCGNGK----YLGINKE--LYMIGCDRSQNLVDICRERQ---------FQAFVCDA 454
           + ++GCG G      L  N +  L++  CD S   +++ +            F   +CD 
Sbjct: 184 ILEVGCGVGNTVFPILQTNNDPGLFVYCCDFSSTAIELVQTNSEYDPSRCFAFVHDLCDE 243

Query: 455 -LAVPVRSGSCDACISIAVIHHFATAERRVAALQEIVRLLRPGGKALI 501
             + PV  GS D  I I V+      ++   A+  + RLL+PGG  L+
Sbjct: 244 EKSYPVPKGSLDIIILIFVLSA-VVPDKMQKAINRLSRLLKPGGMVLL 290


>gi|20911035 peptidylprolyl isomerase-like 4 [Homo sapiens]
          Length = 492

 Score = 34.3 bits (77), Expect = 0.38
 Identities = 27/125 (21%), Positives = 55/125 (44%), Gaps = 20/125 (16%)

Query: 82  YSFARYRTTEESKRAYVTLNGKEVVDDLGQKITLYLNFVEKVQWKEL------------- 128
           Y+F  +   E+ ++A+  ++   ++DD    +  +   V KV+WK               
Sbjct: 283 YAFIEFEKEEDCEKAFFKMDNV-LIDDRRIHVD-FSQSVAKVKWKGKGGKYTKSDFKEYE 340

Query: 129 RPQALPPGLMVVEEIISSEEEKMLLESVDWTEDTDNQNSQKSLKHRRVKHFGYEFHYENN 188
           + Q  PP L++ +++   ++ K  L   +  ED+ + +S  S KH++  H     H    
Sbjct: 341 KEQDKPPNLVLKDKVKPKQDTKYDLILDEQAEDSKSSHSHTSKKHKKKTH-----HCSEE 395

Query: 189 NVDKD 193
             D+D
Sbjct: 396 KEDED 400


>gi|188219593 TIA1 protein isoform 1 [Homo sapiens]
          Length = 375

 Score = 33.9 bits (76), Expect = 0.49
 Identities = 15/56 (26%), Positives = 30/56 (53%)

Query: 50  GGLGNGVSRNQLLPVLEKCGLVDALLMPPNKPYSFARYRTTEESKRAYVTLNGKEV 105
           GG+ +G++   +       G +  + + P+K YSF R+ + E +  A V++NG  +
Sbjct: 208 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTI 263


>gi|188219591 TIA1 protein isoform 2 [Homo sapiens]
          Length = 386

 Score = 33.9 bits (76), Expect = 0.49
 Identities = 15/56 (26%), Positives = 30/56 (53%)

Query: 50  GGLGNGVSRNQLLPVLEKCGLVDALLMPPNKPYSFARYRTTEESKRAYVTLNGKEV 105
           GG+ +G++   +       G +  + + P+K YSF R+ + E +  A V++NG  +
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTI 274


>gi|165932358 methyltransferase like 2A [Homo sapiens]
          Length = 378

 Score = 33.9 bits (76), Expect = 0.49
 Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 17/108 (15%)

Query: 410 VADIGCGNGK----YLGINKE--LYMIGCDRSQNLVDICRERQ---------FQAFVCDA 454
           + ++GCG G      L  N +  L++  CD S   +++ +            F   +CD 
Sbjct: 184 ILEVGCGVGNTVFPILQTNNDPGLFVYCCDFSSTAIELVQTNSEYDPSRCFAFVHDLCDE 243

Query: 455 -LAVPVRSGSCDACISIAVIHHFATAERRVAALQEIVRLLRPGGKALI 501
             + PV  GS D  I I V+      ++   A+  + RLL+PGG  L+
Sbjct: 244 EKSYPVPKGSLDIIILIFVLSAIVP-DKMQKAINRLSRLLKPGGMMLL 290


>gi|20357575 apobec-1 complementation factor isoform 2 [Homo
           sapiens]
          Length = 594

 Score = 33.1 bits (74), Expect = 0.84
 Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 16/121 (13%)

Query: 1   MDSNHQSNYKLSKTEKKFLRKQI--KAKHTLLRHEGIET---------VSYATQSLVVAN 49
           M+SNH+S   LS T+K+   + +  +  ++L++  G             +   +   +  
Sbjct: 1   MESNHKSGDGLSGTQKEAALRALVQRTGYSLVQENGQRKYGGPPPGWDAAPPERGCEIFI 60

Query: 50  GGLGNGVSRNQLLPVLEKCGLVDALLMPP-----NKPYSFARYRTTEESKRAYVTLNGKE 104
           G L   +  ++L+P+ EK G +  + M       N+ Y+F  +    E+K A   LN  E
Sbjct: 61  GKLPRDLFEDELIPLCEKIGKIYEMRMMMDFNGNNRGYAFVTFSNKVEAKNAIKQLNNYE 120

Query: 105 V 105
           +
Sbjct: 121 I 121


>gi|20357572 apobec-1 complementation factor isoform 1 [Homo
           sapiens]
          Length = 586

 Score = 33.1 bits (74), Expect = 0.84
 Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 16/121 (13%)

Query: 1   MDSNHQSNYKLSKTEKKFLRKQI--KAKHTLLRHEGIET---------VSYATQSLVVAN 49
           M+SNH+S   LS T+K+   + +  +  ++L++  G             +   +   +  
Sbjct: 1   MESNHKSGDGLSGTQKEAALRALVQRTGYSLVQENGQRKYGGPPPGWDAAPPERGCEIFI 60

Query: 50  GGLGNGVSRNQLLPVLEKCGLVDALLMPP-----NKPYSFARYRTTEESKRAYVTLNGKE 104
           G L   +  ++L+P+ EK G +  + M       N+ Y+F  +    E+K A   LN  E
Sbjct: 61  GKLPRDLFEDELIPLCEKIGKIYEMRMMMDFNGNNRGYAFVTFSNKVEAKNAIKQLNNYE 120

Query: 105 V 105
           +
Sbjct: 121 I 121


>gi|38570140 alkB, alkylation repair homolog 6 isoform 1 [Homo
           sapiens]
          Length = 161

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 24/117 (20%)

Query: 129 RPQALPPGLMVVEEIISSEEEKMLLESV------DWTEDTDNQNSQKSLKHRRVKHFGYE 182
           R +  PP +  V + IS EEE+ LL  V       WT+          L  R+++++G  
Sbjct: 43  RVEQAPPVIYYVPDFISKEEEEYLLRQVFNAPKPKWTQ----------LSGRKLQNWGGL 92

Query: 183 FHYENNNVDKDKPLSGGLPDICESFLEKWLRKGYIKHKP-DQMTINQYEPGQGIPAH 238
            H      ++       LP   + +++K          P + + +NQY PG+GI  H
Sbjct: 93  PHPRGMVPER-------LPPWLQRYVDKVSNLSLFGGLPANHVLVNQYLPGEGIMHH 142


>gi|18201888 poly(A) binding protein, cytoplasmic 5 [Homo sapiens]
          Length = 382

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 10/82 (12%)

Query: 79  NKPYSFARYRTTEESKRAYVTLNGKEV------VDDLGQKITLYLNFVEKVQWKELRPQA 132
           +K + F RY T E +++A + L+GK +      V    +KI        + +   L+ ++
Sbjct: 238 SKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKS 297

Query: 133 LPPGLMV----VEEIISSEEEK 150
            PPG+ +    ++E I+ E+ K
Sbjct: 298 RPPGVPIYIKNLDETINDEKLK 319


>gi|100913204 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11
           isoform 2 [Homo sapiens]
          Length = 856

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 27/128 (21%), Positives = 55/128 (42%), Gaps = 8/128 (6%)

Query: 320 LTLSKRGLRTSFTFRKVRQTPCNCSYPLVCDSQRKETPPSFPESDKEASRLEQEYVHQVY 379
           L LS+  L T     ++ Q        ++ + +  E        D++   LE+E++ ++Y
Sbjct: 171 LRLSREMLETGPEAERLEQLESGEEELVLAEYESDEEKKVASRVDEDEDDLEEEHITKIY 230

Query: 380 EEIAGHFSSTRHTPWPHIVEFLKALPSGSIVADIGCGNGKYLGINKELYMIGCDR--SQN 437
                 + S  H+     V  +K  P G  V  +  G+ + L +N+++  +G  +  +  
Sbjct: 231 ------YCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDR 284

Query: 438 LVDICRER 445
            VD+ R R
Sbjct: 285 CVDMQRSR 292


>gi|100913202 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11
           isoform 1 [Homo sapiens]
          Length = 906

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 27/128 (21%), Positives = 55/128 (42%), Gaps = 8/128 (6%)

Query: 320 LTLSKRGLRTSFTFRKVRQTPCNCSYPLVCDSQRKETPPSFPESDKEASRLEQEYVHQVY 379
           L LS+  L T     ++ Q        ++ + +  E        D++   LE+E++ ++Y
Sbjct: 171 LRLSREMLETGPEAERLEQLESGEEELVLAEYESDEEKKVASRVDEDEDDLEEEHITKIY 230

Query: 380 EEIAGHFSSTRHTPWPHIVEFLKALPSGSIVADIGCGNGKYLGINKELYMIGCDR--SQN 437
                 + S  H+     V  +K  P G  V  +  G+ + L +N+++  +G  +  +  
Sbjct: 231 ------YCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDR 284

Query: 438 LVDICRER 445
            VD+ R R
Sbjct: 285 CVDMQRSR 292


>gi|132566527 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11
           isoform 3 [Homo sapiens]
          Length = 970

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 27/128 (21%), Positives = 55/128 (42%), Gaps = 8/128 (6%)

Query: 320 LTLSKRGLRTSFTFRKVRQTPCNCSYPLVCDSQRKETPPSFPESDKEASRLEQEYVHQVY 379
           L LS+  L T     ++ Q        ++ + +  E        D++   LE+E++ ++Y
Sbjct: 171 LRLSREMLETGPEAERLEQLESGEEELVLAEYESDEEKKVASRVDEDEDDLEEEHITKIY 230

Query: 380 EEIAGHFSSTRHTPWPHIVEFLKALPSGSIVADIGCGNGKYLGINKELYMIGCDR--SQN 437
                 + S  H+     V  +K  P G  V  +  G+ + L +N+++  +G  +  +  
Sbjct: 231 ------YCSRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDR 284

Query: 438 LVDICRER 445
            VD+ R R
Sbjct: 285 CVDMQRSR 292


>gi|225579095 S-phase cyclin A-associated protein in the ER isoform
           b [Homo sapiens]
          Length = 1154

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 42/198 (21%), Positives = 77/198 (38%), Gaps = 30/198 (15%)

Query: 19  LRKQIKAKHTLLRHEGIETVSYATQSLV-VANGGLGNGVSRNQLLPVLEK--CGLVDALL 75
           L+K+I+ KH       +E +    +    +++G   N     +L P   K  C L + L+
Sbjct: 496 LQKKIQLKHDESIRRHMEQIEQRKEKAAELSSGRHANTDYAPKLTPYERKKQCSLCNVLI 555

Query: 76  MPPNKPYSFARYRTTEESKRAYVTLNGKEVVDDLGQKITLYLNFVEKVQWKELRPQALPP 135
                 +S  + R  +++ R   ++ G+E+ D+  + ++L    ++              
Sbjct: 556 SSEVYLFSHVKGRKHQQAVRENTSIQGRELSDEEVEHLSLKKYIID-------------- 601

Query: 136 GLMVVEEIISSEEEKMLLESVDWTEDTDNQNSQKSLKHR---RVKHFGYEFHYENNNVDK 192
             +VVE    +E  K      D  E   N+   K +K R   R K   YE   E  N   
Sbjct: 602 --IVVESTAPAEALK------DGEERQKNKKKAKKIKARMNFRAKE--YESLMETKNSGS 651

Query: 193 DKPLSGGLPDICESFLEK 210
           D P    L  + +  L++
Sbjct: 652 DSPYKAKLQRLAKDLLKQ 669


>gi|225579092 S-phase cyclin A-associated protein in the ER isoform
           a [Homo sapiens]
          Length = 1400

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 42/198 (21%), Positives = 77/198 (38%), Gaps = 30/198 (15%)

Query: 19  LRKQIKAKHTLLRHEGIETVSYATQSLV-VANGGLGNGVSRNQLLPVLEK--CGLVDALL 75
           L+K+I+ KH       +E +    +    +++G   N     +L P   K  C L + L+
Sbjct: 742 LQKKIQLKHDESIRRHMEQIEQRKEKAAELSSGRHANTDYAPKLTPYERKKQCSLCNVLI 801

Query: 76  MPPNKPYSFARYRTTEESKRAYVTLNGKEVVDDLGQKITLYLNFVEKVQWKELRPQALPP 135
                 +S  + R  +++ R   ++ G+E+ D+  + ++L    ++              
Sbjct: 802 SSEVYLFSHVKGRKHQQAVRENTSIQGRELSDEEVEHLSLKKYIID-------------- 847

Query: 136 GLMVVEEIISSEEEKMLLESVDWTEDTDNQNSQKSLKHR---RVKHFGYEFHYENNNVDK 192
             +VVE    +E  K      D  E   N+   K +K R   R K   YE   E  N   
Sbjct: 848 --IVVESTAPAEALK------DGEERQKNKKKAKKIKARMNFRAKE--YESLMETKNSGS 897

Query: 193 DKPLSGGLPDICESFLEK 210
           D P    L  + +  L++
Sbjct: 898 DSPYKAKLQRLAKDLLKQ 915


>gi|30795242 aryl hydrocarbon receptor nuclear translocator isoform
           3 [Homo sapiens]
          Length = 774

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 3/86 (3%)

Query: 571 RQVSNSKLPVHVNRTSFYSQDVLVPWHLKGNPDKGKPVEPFGPIGSQDPSPVFHRYYHVF 630
           +Q     +P      S+    V+ P    G P+  KP+E    + +QD  P F   YH  
Sbjct: 491 QQTELDMVPGRDGLASYNHSQVVQPVTTTG-PEHSKPLEKSDGLFAQDRDPRFSEIYHNI 549

Query: 631 REGELEGACRTVSDVRILQSYYDQGN 656
              + +G   + S V   Q  + QGN
Sbjct: 550 NADQSKGI--SSSTVPATQQLFSQGN 573


>gi|4502231 aryl hydrocarbon receptor nuclear translocator isoform 1
           [Homo sapiens]
          Length = 789

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 3/86 (3%)

Query: 571 RQVSNSKLPVHVNRTSFYSQDVLVPWHLKGNPDKGKPVEPFGPIGSQDPSPVFHRYYHVF 630
           +Q     +P      S+    V+ P    G P+  KP+E    + +QD  P F   YH  
Sbjct: 506 QQTELDMVPGRDGLASYNHSQVVQPVTTTG-PEHSKPLEKSDGLFAQDRDPRFSEIYHNI 564

Query: 631 REGELEGACRTVSDVRILQSYYDQGN 656
              + +G   + S V   Q  + QGN
Sbjct: 565 NADQSKGI--SSSTVPATQQLFSQGN 588


>gi|5902104 SRY (sex determining region Y)-box 10 [Homo sapiens]
          Length = 466

 Score = 30.8 bits (68), Expect = 4.2
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 11/60 (18%)

Query: 222 DQMTINQYEPGQGIPAHIDTHSAFEDEIVSLSLGSEIVMDFKH------PDGIAVPVMLP 275
           D   ++QY P  G P H+ ++SA         LGS + +   H      P G+A+P + P
Sbjct: 293 DVAELDQYLPPNGHPGHVSSYSA-----AGYGLGSALAVASGHSAWISKPPGVALPTVSP 347


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.134    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,252,881
Number of Sequences: 37866
Number of extensions: 1235592
Number of successful extensions: 3400
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 3361
Number of HSP's gapped (non-prelim): 59
length of query: 664
length of database: 18,247,518
effective HSP length: 109
effective length of query: 555
effective length of database: 14,120,124
effective search space: 7836668820
effective search space used: 7836668820
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.