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Search of human proteins with 193788649
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|193788649 retinoic acid induced 2 [Homo sapiens]
(530 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|193788649 retinoic acid induced 2 [Homo sapiens] 1062 0.0
gi|117938310 sine oculis binding protein homolog [Homo sapiens] 128 1e-29
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 60 6e-09
gi|124249376 proline rich 21 [Homo sapiens] 57 4e-08
gi|146134388 YLP motif containing 1 [Homo sapiens] 56 9e-08
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 55 1e-07
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 53 6e-07
gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens] 53 8e-07
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 52 2e-06
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 52 2e-06
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 52 2e-06
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r... 52 2e-06
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r... 52 2e-06
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r... 52 2e-06
gi|21071056 SWI/SNF-related matrix-associated actin-dependent re... 52 2e-06
gi|14602439 Williams Beuren syndrome chromosome region 14 isofor... 51 2e-06
gi|14602437 Williams Beuren syndrome chromosome region 14 isofor... 51 2e-06
gi|14602435 Williams Beuren syndrome chromosome region 14 isofor... 51 2e-06
gi|14602433 Williams Beuren syndrome chromosome region 14 isofor... 51 2e-06
gi|19923345 RNA binding motif protein 12 [Homo sapiens] 50 4e-06
gi|23510462 RNA binding motif protein 12 [Homo sapiens] 50 4e-06
gi|155030236 ribonuclease III, nuclear isoform 2 [Homo sapiens] 49 1e-05
gi|155030234 ribonuclease III, nuclear isoform 1 [Homo sapiens] 49 1e-05
gi|126090663 zinc finger homeodomain 4 [Homo sapiens] 49 1e-05
gi|62460633 RNA-binding motif protein 16 [Homo sapiens] 49 1e-05
gi|153792074 proline rich 12 [Homo sapiens] 47 3e-05
gi|47132519 Ras association and pleckstrin homology domains 1 is... 47 6e-05
gi|115387123 protocadherin 15 isoform CD1-4 precursor [Homo sapi... 46 7e-05
gi|218505798 protocadherin 15 isoform CD1-10 precursor [Homo sap... 46 7e-05
gi|218505785 protocadherin 15 isoform CD1-9 precursor [Homo sapi... 46 7e-05
>gi|193788649 retinoic acid induced 2 [Homo sapiens]
Length = 530
Score = 1062 bits (2746), Expect = 0.0
Identities = 530/530 (100%), Positives = 530/530 (100%)
Query: 1 MDDLQSQNLSMDMTDSPPALANNRLENGMAQLITTEAWNINSTDLVKKALVTVPAPSILN 60
MDDLQSQNLSMDMTDSPPALANNRLENGMAQLITTEAWNINSTDLVKKALVTVPAPSILN
Sbjct: 1 MDDLQSQNLSMDMTDSPPALANNRLENGMAQLITTEAWNINSTDLVKKALVTVPAPSILN 60
Query: 61 PPAESQSGMALKVAATVLQPLCLGESPVVMPIHMQVEGSSAPELNPNGNATYVMTTQGPV 120
PPAESQSGMALKVAATVLQPLCLGESPVVMPIHMQVEGSSAPELNPNGNATYVMTTQGPV
Sbjct: 61 PPAESQSGMALKVAATVLQPLCLGESPVVMPIHMQVEGSSAPELNPNGNATYVMTTQGPV 120
Query: 121 QLPVVLEQHVFQHLNSPLVLPQEAPCSSSTIHNNLFQGAEDPEAQPQLLDLRIPSQPQEP 180
QLPVVLEQHVFQHLNSPLVLPQEAPCSSSTIHNNLFQGAEDPEAQPQLLDLRIPSQPQEP
Sbjct: 121 QLPVVLEQHVFQHLNSPLVLPQEAPCSSSTIHNNLFQGAEDPEAQPQLLDLRIPSQPQEP 180
Query: 181 TLPFEAVLQNLFPSQGTLGPPPCQPPPGYAPVPPQPFSSPLSPLVPPATLLVPYPVIVPL 240
TLPFEAVLQNLFPSQGTLGPPPCQPPPGYAPVPPQPFSSPLSPLVPPATLLVPYPVIVPL
Sbjct: 181 TLPFEAVLQNLFPSQGTLGPPPCQPPPGYAPVPPQPFSSPLSPLVPPATLLVPYPVIVPL 240
Query: 241 PVPVPIPIPIPMPQSSESKFSSSFPKPPSSFGLHPFKGTQTPLEKDELKPFDILQPKEYF 300
PVPVPIPIPIPMPQSSESKFSSSFPKPPSSFGLHPFKGTQTPLEKDELKPFDILQPKEYF
Sbjct: 241 PVPVPIPIPIPMPQSSESKFSSSFPKPPSSFGLHPFKGTQTPLEKDELKPFDILQPKEYF 300
Query: 301 QLSRHTVIKMGSENEALDLSMKSVPWLKAGEVSPPIFQEDAALDLSVAAHRKSEPPPETL 360
QLSRHTVIKMGSENEALDLSMKSVPWLKAGEVSPPIFQEDAALDLSVAAHRKSEPPPETL
Sbjct: 301 QLSRHTVIKMGSENEALDLSMKSVPWLKAGEVSPPIFQEDAALDLSVAAHRKSEPPPETL 360
Query: 361 YDSGASVDSSGHTVMEKLPSGMEISFAPATSHEAPAMMDSHISSSDAATEMLSQPNHPSG 420
YDSGASVDSSGHTVMEKLPSGMEISFAPATSHEAPAMMDSHISSSDAATEMLSQPNHPSG
Sbjct: 361 YDSGASVDSSGHTVMEKLPSGMEISFAPATSHEAPAMMDSHISSSDAATEMLSQPNHPSG 420
Query: 421 EVKAENNIEMVGESQAAKVIVSVEDAVPTIFCGKIKGLSGVSTKNFSFKREDSVLQGYDI 480
EVKAENNIEMVGESQAAKVIVSVEDAVPTIFCGKIKGLSGVSTKNFSFKREDSVLQGYDI
Sbjct: 421 EVKAENNIEMVGESQAAKVIVSVEDAVPTIFCGKIKGLSGVSTKNFSFKREDSVLQGYDI 480
Query: 481 NSQGEESMGNAEPLRKPIKNRSIKLKKVNSQEIHMLPIKKQRLATFFPRK 530
NSQGEESMGNAEPLRKPIKNRSIKLKKVNSQEIHMLPIKKQRLATFFPRK
Sbjct: 481 NSQGEESMGNAEPLRKPIKNRSIKLKKVNSQEIHMLPIKKQRLATFFPRK 530
>gi|117938310 sine oculis binding protein homolog [Homo sapiens]
Length = 873
Score = 128 bits (322), Expect = 1e-29
Identities = 93/285 (32%), Positives = 128/285 (44%), Gaps = 50/285 (17%)
Query: 23 NRLENGMAQLITTEAWNINSTDLVKKALVTV----------PAPSILNPPAESQSGMALK 72
N+ E QL+T ++WNI TD +KA V P+ S P+++ + K
Sbjct: 285 NKAEGTGVQLLTPDSWNIPLTDARRKAPSPVATAGQSQGPGPSASTTVSPSDTANCSVTK 344
Query: 73 VAATVLQPLCLGESPVVMPIHMQVEGSSAPELN-PNGNATYVMTTQGPVQLPVVLEQHVF 131
+ V + + + E+P + P+ +Q S P L P + VMT +GPV LP+ +EQ +
Sbjct: 345 IPTPVPKSIPISETPNIPPVSVQPPASIGPPLGVPPRSPPMVMTNRGPVPLPIFMEQQIM 404
Query: 132 QHLNSPLVL--PQEAPCSSSTIHNNLFQGAEDPEAQPQLLD--------------LRIPS 175
Q + P + P A +S + N + G P P+ L + PS
Sbjct: 405 QQIRPPFIRGPPHHASNPNSPLSNPMLPGIGPPPGGPRNLGPTSSPMHRPMLSPHIHPPS 464
Query: 176 QPQEPTLPFEAVLQNLFPSQGTLGPPPCQPPPGYAPVPPQPFSSP---------LSPLVP 226
P P P L P P P P P + +P P P L+PLVP
Sbjct: 465 TPTMPGNP-----PGLLPPPPPGAPLPSLPFPPVSMMPNGPMPVPQMMNFGLPSLAPLVP 519
Query: 227 PATLLVPYPVIVPLPVPVPIPIPIPMPQSSESKFSSSFPKPPSSF 271
P TLLVPYPVIVPLPVP+PIPIPIP S KPP+ F
Sbjct: 520 PPTLLVPYPVIVPLPVPIPIPIPIPHVSDS---------KPPNGF 555
Score = 33.1 bits (74), Expect = 0.65
Identities = 28/105 (26%), Positives = 40/105 (38%), Gaps = 14/105 (13%)
Query: 193 PSQGTLGPPPCQPPPGYAPVP-PQPFSSPLS--PLVPPATLLVPYPVIVPLPVPV----- 244
PS T P +P P P S P+S P +PP ++ P + PL VP
Sbjct: 326 PSASTTVSPSDTANCSVTKIPTPVPKSIPISETPNIPPVSVQPPASIGPPLGVPPRSPPM 385
Query: 245 ------PIPIPIPMPQSSESKFSSSFPKPPSSFGLHPFKGTQTPL 283
P+P+PI M Q + F + P +P P+
Sbjct: 386 VMTNRGPVPLPIFMEQQIMQQIRPPFIRGPPHHASNPNSPLSNPM 430
Score = 33.1 bits (74), Expect = 0.65
Identities = 14/26 (53%), Positives = 15/26 (57%)
Query: 200 PPPCQPPPGYAPVPPQPFSSPLSPLV 225
PPP QPPP P PP+ SP P V
Sbjct: 740 PPPEQPPPPPPPAPPKKLLSPEEPAV 765
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 59.7 bits (143), Expect = 6e-09
Identities = 78/298 (26%), Positives = 108/298 (36%), Gaps = 42/298 (14%)
Query: 8 NLSMDMTDSPPALANNRLENGMAQLITTEAWNINSTDLVKKALVTVPAPSILNPPAESQS 67
+L+ ++ P+LA L+ A L T ++ + + P + PP E+ S
Sbjct: 529 SLTTPPLENLPSLAPPPLQTASAPLTTP---HLETPPCPAPCPLQAPPSPLTTPPPETPS 585
Query: 68 GMALK-------VAATVLQPLC------LGESPVVMPIHMQVEGSSAPELNPNGNATYVM 114
+A +A+ LQ L L P P + + AP P +
Sbjct: 586 SIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPL 645
Query: 115 TTQGPVQLPVVLEQHVFQHLNSPLVLPQ-EAPCSSSTIHNNLFQGAEDPEAQPQLLDLRI 173
T P Q P L H+ Q SP P +AP S +A P L +
Sbjct: 646 ATPSP-QAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPL 704
Query: 174 PSQPQEPTLPFEAVLQNLFPSQGTLGPPPCQPPPGYAP---VPPQP-FSSPLSPLVPPAT 229
P P P P + PPP PPP AP VPP P S P+SP P
Sbjct: 705 QVPPSPPASP---------PMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPP 755
Query: 230 LLVPYPVIVPLPVPVPIPIPIPM----------PQSSESKFSSSFPKPPSSF-GLHPF 276
+ P PL VP P +PM P + + + P PP+SF G PF
Sbjct: 756 RVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPF 813
Score = 56.2 bits (134), Expect = 7e-08
Identities = 73/262 (27%), Positives = 93/262 (35%), Gaps = 44/262 (16%)
Query: 54 PAPSILNPPAESQSGMA----------------LKVAATVLQPLCLGESPVVMPIHMQVE 97
P S++ PP E+QS +A + + PL +P+ P H++
Sbjct: 503 PLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTP-HLETP 561
Query: 98 GSSAP---ELNPNGNATYVMTTQG-----PVQLPVVLEQHVFQHLNSPLVLPQEAPCSSS 149
AP + P+ T T P Q P L Q L SP + P P +
Sbjct: 562 PCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQA 621
Query: 150 TIHNNL--FQGAEDPEAQPQLLDLRIPSQPQEPTLPFEAVLQNLFPSQGTLGPPPCQPPP 207
L Q P A P L L PS PQ P +LQ F PPP PP
Sbjct: 622 PPXLALPPLQAPPSPPASPPLSPLATPS-PQAPNALAVHLLQAPF------SPPP--SPP 672
Query: 208 GYAPVPPQPFSSPLSPLVPPATLLVPYPVIVPLPVPVPIPIPIPM-------PQSSESKF 260
AP P P S P+SP P + P PL VP P PM PQ+
Sbjct: 673 VQAPFSP-PASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLA 731
Query: 261 SSSFPKPPSSFGLHPFKGTQTP 282
+ PPS P + TP
Sbjct: 732 APPLQVPPSPPASPPMSPSATP 753
Score = 50.1 bits (118), Expect = 5e-06
Identities = 30/103 (29%), Positives = 42/103 (40%), Gaps = 8/103 (7%)
Query: 174 PSQPQEPTLPFEAVLQNLFPSQGTLGPPPCQPPPGYAPVPPQPFSSP------LSPLVPP 227
P P P+ P LQ L P Q T PP P P+ P ++P P+ PP
Sbjct: 263 PRAPAHPSQPKPKGLQALRPPQVT--PPRKDAAPALGPLSSSPLATPSPSGTKARPVPPP 320
Query: 228 ATLLVPYPVIVPLPVPVPIPIPIPMPQSSESKFSSSFPKPPSS 270
P P +P P+ P+P+ P S + P PP++
Sbjct: 321 DNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPAT 363
Score = 39.3 bits (90), Expect = 0.009
Identities = 50/207 (24%), Positives = 71/207 (34%), Gaps = 25/207 (12%)
Query: 85 ESPVVMPIHMQVEGSSAPELNPNGNATYVMTTQGPVQLPVVLEQHVFQHLNSPLVLPQEA 144
++P+ +P ++ S +P ++P + T P+Q L H Q S L++P
Sbjct: 458 QAPLSLPASPPLQTSLSPAVSPLSSPL----TIHPLQALSSLASHSPQAPLSSLIMPPLE 513
Query: 145 PCSSSTIHNNLFQGAEDPEAQPQLLDLRIPSQPQEPTL---PFEAVLQNLFPSQGTLGPP 201
SS P Q L P P+L P + L L P
Sbjct: 514 TQSSLA----------PPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPH--LETP 561
Query: 202 PC------QPPPGYAPVPPQPFSSPLSPLVPPATLLVPYPVIVPLPVPVPIPIPIPMPQS 255
PC Q PP PP S ++ P A + P + LP P P+ P PQ+
Sbjct: 562 PCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQA 621
Query: 256 SESKFSSSFPKPPSSFGLHPFKGTQTP 282
PPS P TP
Sbjct: 622 PPXLALPPLQAPPSPPASPPLSPLATP 648
Score = 36.2 bits (82), Expect = 0.076
Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 12/108 (11%)
Query: 174 PSQPQEPTLPFEAVLQNLFPSQGTLGPPPCQPPPGYAPVPPQPFSSPLSPLVPPATLLVP 233
PS P LP + PS TL PP PP + PP + P+ PP+ +P
Sbjct: 333 PSPPLATPLPLAPPSPSAPPSLQTLPSPPATPP---SQAPPSMTTPPMQ--APPSLQTIP 387
Query: 234 YPVIVPLPVPVPIPIPIPMPQSSESKFSSSFPKPPSSFGLHPFKGTQT 281
P+ VP + P Q+ S + S + +S G + T +
Sbjct: 388 -------PIQVPHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHS 428
Score = 35.8 bits (81), Expect = 0.100
Identities = 70/259 (27%), Positives = 91/259 (35%), Gaps = 43/259 (16%)
Query: 54 PAPSILNPPAESQSGMALKVAATVLQ-----PLCLGESPVVMPIHMQVEGSSAPELN--P 106
PA ++P A S +AA LQ P SP P +AP L P
Sbjct: 680 PASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPP 739
Query: 107 NGNATYVMTTQG--PVQLPVVLEQHVFQHLNSPLVLPQEAPCSSSTIHNNLFQGAEDPEA 164
+ A+ M+ P ++P +L Q SP P P S P+A
Sbjct: 740 SPPASPPMSPSATPPPRVPPLLAAPPLQVPPSP---PASLPMSPLA--------KPPPQA 788
Query: 165 QPQLLDLRIPSQPQEP-TLPFEAVLQNL--FPSQGTLGPPPCQPPPGYAP---VPPQPFS 218
P L + + P P + P +A P PPP PP AP VPP P +
Sbjct: 789 PPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPA 848
Query: 219 SPL-----SPLVPPATLLVPYPVIVPLPVPVPIPIPIPMPQSSESKFSSSFPKPPSSFGL 273
SP P P V P + P P P P P S+ S P G
Sbjct: 849 SPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLS--------GPDLAG- 899
Query: 274 HPFKGTQTPLEKDELKPFD 292
H T TP +EL+ +D
Sbjct: 900 HSSSATSTP---EELRGYD 915
Score = 34.3 bits (77), Expect = 0.29
Identities = 38/152 (25%), Positives = 48/152 (31%), Gaps = 17/152 (11%)
Query: 144 APCSSSTIHNNLFQGAEDPEAQPQLLDLR-----IPSQPQEPTLPFEAVLQNLFPSQGTL 198
AP S Q P+ P D + S P P + + P
Sbjct: 265 APAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAA 324
Query: 199 GPPPCQPPPGYAPVPPQPFSSPLSPLVPPATLLVPYPVIVP----------LPVPVPIPI 248
P P PP P P + P SP PP+ +P P P P+ P +
Sbjct: 325 TPLPATLPPSPPLATPLPLAPP-SPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSL 383
Query: 249 -PIPMPQSSESKFSSSFPKPPSSFGLHPFKGT 279
IP Q S S S PPS L + T
Sbjct: 384 QTIPPIQVPHSLTSPSLQAPPSPLALSSLQAT 415
>gi|124249376 proline rich 21 [Homo sapiens]
Length = 389
Score = 57.0 bits (136), Expect = 4e-08
Identities = 63/206 (30%), Positives = 73/206 (35%), Gaps = 29/206 (14%)
Query: 78 LQPLCLGESPVVMPIHMQ--VEGSSAPELNPNGNATYVMTTQGPVQLPVVLEQHVFQHLN 135
L P SP MP+H + V SS L P + T GP +P L F H +
Sbjct: 78 LHPRLFTHSPSSMPLHPRPFVHASSPTALRP------CLFTHGPSSMP--LHPRPFVHAS 129
Query: 136 SPLVLPQEAPC------SSSTIHNNLFQGAEDPEAQPQLLDLRIPSQPQEPTLPFEAVLQ 189
SP LP PC SS +H F A P A P L PS PF
Sbjct: 130 SPTALP---PCLFTHGPSSMPLHPRPFLHASSPTALPPCLFTHGPSSMPLHPRPFVHA-- 184
Query: 190 NLFPSQGTLGPPPCQPPPGYAPVPPQPFSSPLSPLVPPATLLVPYPVIVPLPVPVPIPIP 249
S L P P P+ P+PF SP P L P +PL P P
Sbjct: 185 ---SSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPSSMPLH-----PRP 236
Query: 250 IPMPQSSESKFSSSFPKPPSSFGLHP 275
S + F PSS LHP
Sbjct: 237 FVHASSPTALRPCLFTHGPSSMPLHP 262
Score = 48.9 bits (115), Expect = 1e-05
Identities = 60/208 (28%), Positives = 71/208 (34%), Gaps = 29/208 (13%)
Query: 76 TVLQPLCLGESPVVMPIHMQ--VEGSSAPELNPNGNATYVMTTQGPVQLPVVLEQHVFQH 133
T L P P MP+H + + SS L P + T GP +P L F H
Sbjct: 132 TALPPCLFTHGPSSMPLHPRPFLHASSPTALPP------CLFTHGPSSMP--LHPRPFVH 183
Query: 134 LNSPLVLPQEAPC------SSSTIHNNLFQGAEDPEAQPQLLDLRIPSQPQEPTLPFEAV 187
+SP L PC SS +H F A P A P L PS PF
Sbjct: 184 ASSPTAL---RPCLFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPSSMPLHPRPFVHA 240
Query: 188 LQNLFPSQGTLGPPPCQPPPGYAPVPPQPFSSPLSPLVPPATLLVPYPVIVPLPVPVPIP 247
S L P P P+ P+PF SP L P +PL P
Sbjct: 241 -----SSPTALRPCLFTHGPSSMPLHPRPFLHASSPTALRPCLFTHGPSSMPLH-----P 290
Query: 248 IPIPMPQSSESKFSSSFPKPPSSFGLHP 275
P S + F PSS LHP
Sbjct: 291 RPFVHASSPTALRPCLFTHGPSSMPLHP 318
Score = 31.6 bits (70), Expect = 1.9
Identities = 42/149 (28%), Positives = 52/149 (34%), Gaps = 15/149 (10%)
Query: 131 FQHLNSPLVLPQEAPC---SSSTIHNNLFQGAEDPEA-QPQLLDLRIPSQPQEPTLPFEA 186
F H +SP+ L SS+ +H F P + P+L S P P PF
Sbjct: 41 FIHGSSPMALHPRLFTHGPSSTALHPCPFTHGSSPMSLHPRLFTHSPSSMPLHPR-PFVH 99
Query: 187 VLQNLFPSQGTLGPPPCQPPPGYAPVPPQPFSSPLSPLVPPATLLVPYPVIVPLPVPVPI 246
S L P P P+ P+PF SP P L P +PL
Sbjct: 100 A-----SSPTALRPCLFTHGPSSMPLHPRPFVHASSPTALPPCLFTHGPSSMPLH----- 149
Query: 247 PIPIPMPQSSESKFSSSFPKPPSSFGLHP 275
P P S + F PSS LHP
Sbjct: 150 PRPFLHASSPTALPPCLFTHGPSSMPLHP 178
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 55.8 bits (133), Expect = 9e-08
Identities = 46/132 (34%), Positives = 56/132 (42%), Gaps = 21/132 (15%)
Query: 173 IPSQPQEPTLPFEAVLQNLFPSQGTLGPPPCQPPP-----GYAPVPPQPFSS-----PLS 222
+P P+LP + PS + GPPP PPP G PV P P S P+
Sbjct: 560 MPPPVMPPSLPTSVPPPGMPPSLSSAGPPPVLPPPSLSSAGPPPVLPPPSLSSTAPPPVM 619
Query: 223 PLVPPATLLVPYPVIVPLPVPVPIP-----IPIPMPQSSESKFSSSFPKP-----PSSFG 272
PL PP + P P I P VP IP P+P SS+S P+P P SFG
Sbjct: 620 PL-PPLSSATPPPGIPPPGVPQGIPPQLTAAPVPPASSSQSSQVPEKPRPALLPTPVSFG 678
Query: 273 LHPFKGTQTPLE 284
P PL+
Sbjct: 679 SAPPTTYHPPLQ 690
Score = 45.1 bits (105), Expect = 2e-04
Identities = 39/103 (37%), Positives = 48/103 (46%), Gaps = 22/103 (21%)
Query: 157 QGAEDPEAQPQLLDLRIPSQPQEPTLPFEAVLQNLFPSQGTLGPPPCQPPPG-YAPVPP- 214
Q +D ++PQ+ D +P PQE L Q T P PPPG Y P PP
Sbjct: 1474 QKMKDFGSEPQMAD-HLP--PQESRL------------QNTSSRPGMYPPPGSYRPPPPM 1518
Query: 215 -QPFSSPLSPLVPPATLLVPY---PVIVPLPVPVPIPIPIPMP 253
+P S + P PPA VP PV +P P P P P+P P P
Sbjct: 1519 GKPPGSIVRPSAPPARSSVPVTRPPVPIPPPPPPP-PLPPPPP 1560
Score = 38.9 bits (89), Expect = 0.012
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
Query: 163 EAQPQLLDLRIPSQPQEPTLPFEAVLQNLFPSQGTLGPPPCQPPPGYAPVPPQPFSSPLS 222
+ P L+ + + S P+ P +P + + PSQ + PPP PP Y P QP+ P
Sbjct: 133 DGPPGLVPMELESPPESPPVPPGSYMP---PSQSYM-PPPQPPPSYYPPTSSQPYLPPAQ 188
Query: 223 P----LVPPATLLVPYP 235
P P + L P P
Sbjct: 189 PSPSQSPPSQSYLAPTP 205
Score = 37.7 bits (86), Expect = 0.026
Identities = 32/103 (31%), Positives = 42/103 (40%), Gaps = 4/103 (3%)
Query: 177 PQEPTLPFEAVLQNLFPSQGTLGPPPCQPPPGYAP--VPPQ-PFSSPLSPLVPPATLLVP 233
P PT+P + +L P P PPPG P +PP P S P + P + P
Sbjct: 528 PPLPTMPPPVLPPSLPPPVMPPALPATVPPPGMPPPVMPPSLPTSVPPPGMPPSLSSAGP 587
Query: 234 YPVIVPLPVPVPIPIPI-PMPQSSESKFSSSFPKPPSSFGLHP 275
PV+ P + P P+ P P S + P PP S P
Sbjct: 588 PPVLPPPSLSSAGPPPVLPPPSLSSTAPPPVMPLPPLSSATPP 630
Score = 37.4 bits (85), Expect = 0.034
Identities = 36/129 (27%), Positives = 45/129 (34%), Gaps = 26/129 (20%)
Query: 165 QPQLLDLRIPSQPQEPTLPFEAVLQNLFPSQGTLGPPPCQPPPGYAP------------- 211
Q Q+ + P P LP V+ PPP PPPG A
Sbjct: 69 QKQMQCVLQPHHLPPPPLPPPPVMPGGGYGDWQPPPPPMPPPPGPALSYQKQQQYKHQML 128
Query: 212 ----------VPPQPFSSPLSPLVPPATLLVPYPVIVPLPVPVPIPIPIPMPQSSESKFS 261
VP + S P SP VPP + + P +P P P P P P SS+
Sbjct: 129 HHQRDGPPGLVPMELESPPESPPVPPGSYMPPSQSYMPPPQPPPSYYP---PTSSQPYLP 185
Query: 262 SSFPKPPSS 270
+ P P S
Sbjct: 186 PAQPSPSQS 194
Score = 34.7 bits (78), Expect = 0.22
Identities = 26/74 (35%), Positives = 32/74 (43%), Gaps = 7/74 (9%)
Query: 200 PPPCQP----PPGYAPVPPQPFSSPLSPLVPPATL--LVPYPVIVPLPVPVPIPIPIPMP 253
PPP P PP +PP L P V P L VP P + P +P +P +P P
Sbjct: 517 PPPFVPYSQMPPPLPTMPPPVLPPSLPPPVMPPALPATVPPPGMPPPVMPPSLPTSVPPP 576
Query: 254 QSSESKFSSSFPKP 267
S SS+ P P
Sbjct: 577 GMPPS-LSSAGPPP 589
Score = 31.2 bits (69), Expect = 2.5
Identities = 15/39 (38%), Positives = 19/39 (48%)
Query: 239 PLPVPVPIPIPIPMPQSSESKFSSSFPKPPSSFGLHPFK 277
P PVP P P+ +P SS+ P PSS G F+
Sbjct: 16 PPPVPPPPPVALPEASPGPGYSSSTTPAAPSSSGFMSFR 54
Score = 29.6 bits (65), Expect = 7.1
Identities = 57/254 (22%), Positives = 90/254 (35%), Gaps = 33/254 (12%)
Query: 196 GTLGPPPCQPPPGYAPVPPQPFSSP--LSPLVPPATLLVPYPVIVPLPVPVPIPIPIPMP 253
G + PP P P PP P P L P +PP + P VP P +P P+ MP
Sbjct: 512 GNMSMPPPFVPYSQMP-PPLPTMPPPVLPPSLPPPVMPPALPATVP-PPGMPPPV---MP 566
Query: 254 QSSESKFSSSFPKPPSSFGLHPFKGTQTPLEKDELKPFDILQPKEYFQLSRHTVIKMGSE 313
S +S P P G+ P P +L P V+ S
Sbjct: 567 PS----LPTSVPPP----GMPP--------SLSSAGPPPVLPPPSLSSAGPPPVLPPPSL 610
Query: 314 NEALDLSMKSVPWLKAGEVSPPIFQEDAALDLSVAAHRKSEPPPETLYDSGASVDSSGHT 373
+ + +P L + +PP + + + P P + V
Sbjct: 611 SSTAPPPVMPLPPLSS--ATPPPGIPPPGVPQGIPPQLTAAPVPPASSSQSSQVPEKPRP 668
Query: 374 VMEKLPSGMEISFAPATSHEAPAMMDSHISSSDAATEMLSQPNHPSGEVKAENNIEMVGE 433
+ LP+ + AP T++ P + + S + LS+ P ++ + GE
Sbjct: 669 AL--LPTPVSFGSAPPTTYH-PPLQSAGPSEQVNSKAPLSKSALPYSSFSSDQGL---GE 722
Query: 434 SQAA--KVIVSVED 445
S AA + I +V+D
Sbjct: 723 SSAAPSQPITAVKD 736
Score = 29.6 bits (65), Expect = 7.1
Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 8/45 (17%)
Query: 193 PSQGTLGPPPCQ---PPPGYAPVPPQPFSSPLSPLVPPATLLVPY 234
PS L PPP PPPG P+ P S P PP V Y
Sbjct: 1603 PSAPVLPPPPVHSSIPPPGPVPMGMPPMSKP-----PPVQQTVDY 1642
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 55.5 bits (132), Expect = 1e-07
Identities = 76/307 (24%), Positives = 110/307 (35%), Gaps = 54/307 (17%)
Query: 136 SPLVLPQEAPCSSSTIHNNLFQGAEDPEAQPQLLDLRIPSQPQEPTLPFEAVLQNLFPSQ 195
SPL P E+ S + L E P + L P + + PFE + P +
Sbjct: 501 SPLSPPPESSPFSPLEESPLSPPEESPPSPALETPLSPPPEASPLSPPFEESPLSPPPEE 560
Query: 196 GTLGPPP----CQPPPGYAPVPPQPFSSPLSPLVPPATLLVPYPVIVPLPVPVPIPIPIP 251
PPP PPP +P+ P P SP+SP + L P+ P P P+ P
Sbjct: 561 LPTSPPPEASRLSPPPEESPMSPPPEESPMSPPPEASRLFPPFEESPLSPPPEESPLS-P 619
Query: 252 MPQSSESKFSSSFPKPPSSFGLHPFKGTQTPLEKDELKPFDILQPKEYFQLSRHTVI-KM 310
P++S PP + P P E+ + P P E +LS V+ ++
Sbjct: 620 PPEASR------LSPPPEDSPMSP------PPEESPMSP-----PPEVSRLSPLPVVSRL 662
Query: 311 GSENEALDLS-----MKSVPWLKAGEVSPPIFQEDAALDLSVAAHRKSEPPPETLYDSGA 365
E LS + P +A +SPP ED+ + PPPE S
Sbjct: 663 SPPPEESPLSPPPEESPTSPPPEASRLSPP--PEDS----------PTSPPPEDSPASPP 710
Query: 366 SVDSSGHTVMEKLP--------------SGMEISFAPATSHEAPAMMDSHISSSDAATEM 411
DS +E+ P G +S P H +P + H+S +
Sbjct: 711 PEDSLMSLPLEESPLLPLPEEPQLCPRSEGPHLSPRPEEPHLSPRPEEPHLSPQAEEPHL 770
Query: 412 LSQPNHP 418
QP P
Sbjct: 771 SPQPEEP 777
Score = 45.1 bits (105), Expect = 2e-04
Identities = 49/161 (30%), Positives = 67/161 (41%), Gaps = 23/161 (14%)
Query: 202 PCQPPPGYAPVPPQPFSSPLSPLVPPATLLVPYPVIVPL-PVPVPIPIPIPMPQS--SES 258
P PPP +P+ P P SP SP P A+ L P P +P P+P + + P+ +S S
Sbjct: 439 PLLPPPEESPLSPPPEESPTSP-PPEASRLSPPPEELPASPLPEALHLSRPLEESPLSPP 497
Query: 259 KFSSSFPKPPSSFGLHPFKGTQTPLEKDELKPFDILQPKEYFQLSRHTVIKMGSENEALD 318
S PP S PF +PLE+ L P + P + + EA
Sbjct: 498 PEESPLSPPPES---SPF----SPLEESPLSPPEESPPSPALE------TPLSPPPEASP 544
Query: 319 LSMKSVPWLKAGEVSPPIFQEDAALDLSVAAHRKSEPPPET 359
LS P + +SPP E+ A R S PP E+
Sbjct: 545 LS----PPFEESPLSPP--PEELPTSPPPEASRLSPPPEES 579
Score = 44.3 bits (103), Expect = 3e-04
Identities = 44/175 (25%), Positives = 66/175 (37%), Gaps = 50/175 (28%)
Query: 78 LQPLCLGESPVVMPIHMQVEGSSAPELNPNGNATYVMTTQG------PVQLPVVLEQHVF 131
L P + P+ P+ + ++ P L+P G Y +G P+ P+
Sbjct: 925 LSPQLMPPDPLPPPLSPIITAAAPPALSPLGELEYPFGAKGDSDPESPLAAPI------- 977
Query: 132 QHLNSPLVLPQEAPCSSSTIHNNLFQGAEDPEAQPQLLDLRIPSQPQEPTLPFEAVLQNL 191
L +P+ P EA C+ DPE P ++ +P P P P +L
Sbjct: 978 --LETPISPPPEANCT-------------DPEPVPPMI---LPPSPGSPVGPASPILMEP 1019
Query: 192 FPSQGTLGPPPCQPPPGYAPVPPQPFSSPLSPLVPPATLLVPYPVIVPLPVPVPI 246
PP C P ++ VP +SP S PPA +PL VP P+
Sbjct: 1020 L-------PPQCSPLLQHSLVPQ---NSPPSQCSPPA---------LPLSVPSPL 1055
Score = 44.3 bits (103), Expect = 3e-04
Identities = 26/69 (37%), Positives = 33/69 (47%), Gaps = 9/69 (13%)
Query: 200 PPPCQPPPGYAPVPPQPFSSPLSPLVPPATLLVPYPVIVPLPVPVPIPIPIPMPQSSESK 259
PPP +P P +P+ P P S P PLV T PL P P+P P+P+ S ES
Sbjct: 4909 PPPEEPSPPPSPLAPSPASPPTEPLVELPT--------EPLAEP-PVPSPLPLASSPESA 4959
Query: 260 FSSSFPKPP 268
+PP
Sbjct: 4960 RPKPRARPP 4968
Score = 41.2 bits (95), Expect = 0.002
Identities = 101/416 (24%), Positives = 144/416 (34%), Gaps = 80/416 (19%)
Query: 82 CLGESPVVMPIHMQVEGSSAPELNPNGNATYVMT-TQGPVQLPVVLEQHVFQHLNSPLVL 140
CL P + Q EG P L+P ++ T+ P PV E + +
Sbjct: 778 CLCAVPEEPHLSPQAEG---PHLSPQPEELHLSPQTEEPHLSPVPEEPCLSPQPEESHLS 834
Query: 141 PQ-EAPCSSSTIHNNLFQGAEDPEAQPQLLDLRIPSQPQEPTL------------PFEAV 187
PQ E PC S + PE + L R P+EP P E
Sbjct: 835 PQSEEPCLSPRPEESHLS----PELEKPPLSPRPEKPPEEPGQCPAPEELPLFPPPGEPS 890
Query: 188 LQNLF--PSQGTLGPPPCQPPPGYAP-------------VPPQPFSSPLSPLV----PPA 228
L L P+ G PP P P P +PP P PLSP++ PPA
Sbjct: 891 LSPLLGEPALSEPGEPPLSPLPEELPLSPSGEPSLSPQLMPPDPLPPPLSPIITAAAPPA 950
Query: 229 -----TLLVPYPVIVPLPVPVPIPIPI---PMPQSSESKFSSSFPKPPSSFGLHPFK--G 278
L P+ P+ PI P+ E+ + P PP P G
Sbjct: 951 LSPLGELEYPFGAKGDSDPESPLAAPILETPISPPPEANCTDPEPVPPMILPPSPGSPVG 1010
Query: 279 TQTPLEKDELKPFDILQPKEYFQLSRHTVIKMGS-----ENEALDLSMKSVPWLKAGEVS 333
+P+ + L P + L +H+++ S AL LS+ S P G+V
Sbjct: 1011 PASPILMEPL-------PPQCSPLLQHSLVPQNSPPSQCSPPALPLSVPS-PLSPIGKV- 1061
Query: 334 PPIFQEDAALDLSVAAHRKSEPPPETLYDSGASVDSSGHTVMEKLPSGMEISFAPATSHE 393
+ D A + + SEP L S S LPS M PA S
Sbjct: 1062 --VGVSDEAELHEMETEKVSEPECPALEPSATS----------PLPSPMGDLSCPAPS-P 1108
Query: 394 APAMMD-SHISSSDAATEMLSQPNHPSGEVKAENNIEMVGESQAAKVIVSVEDAVP 448
APA+ D S + A + + P S + + E + + V++ E+ P
Sbjct: 1109 APALDDFSGLGEDTAPLDGIDAPG--SQPEPGQTPGSLASELKGSPVLLDPEELAP 1162
Score = 40.4 bits (93), Expect = 0.004
Identities = 58/224 (25%), Positives = 80/224 (35%), Gaps = 53/224 (23%)
Query: 54 PAPSILNPPAES-------QSGMALKVAATVLQPLCLGESPVVMPIHMQVEGSSAPELNP 106
P S L+PP E + A L L L ESP+ +P+ + P+L P
Sbjct: 684 PEASRLSPPPEDSPTSPPPEDSPASPPPEDSLMSLPLEESPL-LPLPEE------PQLCP 736
Query: 107 NGNATYVMTTQGPVQLPVVLEQHVFQHLNSPLVLPQEAPCSSSTIHNNLFQGAEDPEAQP 166
++GP P E H+ P + PQ AE+P P
Sbjct: 737 R--------SEGPHLSPRPEEPHLSPRPEEPHLSPQ----------------AEEPHLSP 772
Query: 167 QLLDLRIPSQPQEPTLPFEAVLQNLFPSQGTLGPPPCQPPPGYAPVPPQPFSSPLSPLVP 226
Q + + + P+EP L +A +L P L P P +PVP +P SP P
Sbjct: 773 QPEEPCLCAVPEEPHLSPQAEGPHLSPQPEELHLSPQTEEPHLSPVPEEPCLSP----QP 828
Query: 227 PATLLVPYPVIVPLPVPVPIPIPIPMPQSSESKFSSSFPKPPSS 270
+ L P P P+ ES S KPP S
Sbjct: 829 EESHLSPQS-----------EEPCLSPRPEESHLSPELEKPPLS 861
Score = 38.5 bits (88), Expect = 0.015
Identities = 58/222 (26%), Positives = 81/222 (36%), Gaps = 43/222 (19%)
Query: 72 KVAATVLQPLCLGESPVVMPIHMQVEGSSAPELNPNG--------NATYV----MTTQGP 119
K + +L P GES + + + G+S+P P + T++ + T
Sbjct: 2267 KASEPLLSPPPFGESRKALEVKKEELGASSPSYGPPNLGFVDSPSSGTHLGGLELKTPDV 2326
Query: 120 VQLPVVLEQHVFQHLNSPLVL-PQEAP-----CSSSTIHNNLFQGAE--DPEAQPQLLDL 171
+ P+ + + L L PQE P S H ++F+ DP AQP L
Sbjct: 2327 FKAPLTPRASQVEPQSPGLGLRPQEPPPAQALAPSPPSHPDIFRPGSYTDPYAQPPLTP- 2385
Query: 172 RIPSQPQEPTLPFEAVLQNLFPSQGTLGPPPCQPPPGYAPVP--PQPFSSPLSPLVP--- 226
+PQ P P PP P ++ VP PQ SS SPL P
Sbjct: 2386 ----RPQPPP-----------PESCCALPPRSLPSDPFSRVPASPQSQSSSQSPLTPRPL 2430
Query: 227 PATLLVPYPVIVPLPVPVPIPIPIPMPQSSESKFSSSFPKPP 268
A P PV P P P PQS + + KPP
Sbjct: 2431 SAEAFCPSPVTPRFQSPDPYSRPPSRPQSRDP--FAPLHKPP 2470
Score = 33.1 bits (74), Expect = 0.65
Identities = 28/73 (38%), Positives = 30/73 (41%), Gaps = 16/73 (21%)
Query: 174 PSQPQEPT-----------LPFEAVLQNLFPS----QG-TLGPPPCQPPPGYAPVPPQPF 217
PS PQEP LP EA L P QG TL PPP + P A + F
Sbjct: 4311 PSSPQEPKRPSQLPSPSSQLPTEAQLPPTHPGTPKPQGPTLEPPPGRVSPAAAQLADTLF 4370
Query: 218 SSPLSPLVPPATL 230
S L P PP L
Sbjct: 4371 SKGLGPWDPPDNL 4383
Score = 30.4 bits (67), Expect = 4.2
Identities = 30/117 (25%), Positives = 41/117 (35%), Gaps = 28/117 (23%)
Query: 169 LDLRIPSQPQEPTLPFEAVLQNLFPSQGTLG-PPPCQPPPGY--APVPPQPFSSPLSPLV 225
L LRIP QP G LG PPP P + +P P S+ +
Sbjct: 2102 LHLRIPPQP------------------GALGSPPPAAAPTIFIGSPTTPAGLSTSADGFL 2143
Query: 226 PPATLLVPYP-------VIVPLPVPVPIPIPIPMPQSSESKFSSSFPKPPSSFGLHP 275
P VP P + +P VP +P P + FP P ++ +P
Sbjct: 2144 KPPAGSVPGPDSPGELFLKLPPQVPAQVPSQDPFGLAPAYPLEPRFPTAPPTYPPYP 2200
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 53.1 bits (126), Expect = 6e-07
Identities = 62/225 (27%), Positives = 86/225 (38%), Gaps = 42/225 (18%)
Query: 44 DLVKKALVTVPAPSILNPPAESQSGMALKVAATVLQPLCLGE------SPVVMPIHMQVE 97
DL + VP P +P S A A+ PL + +P+ MP V
Sbjct: 819 DLPTATVPPVPPPQYFSPAVILPSLAAPLPPASPALPLQAVKLPHPPGAPLAMPCRTIV- 877
Query: 98 GSSAPELNPNGNATYVMTTQGPVQLPVVLEQHVFQHLNS----PLVLPQEAPCSSSTIHN 153
PN AT + P + + L P PQ AP +
Sbjct: 878 --------PNAPATIPLLAVAPPGVAALSIHSAVAQLPGQPVYPAAFPQMAPTDVPPSPH 929
Query: 154 NLFQGAEDPEAQPQLLDLRIPSQPQEPTLPFEAVLQNLFPSQGTLGPPPCQPPPGYAPVP 213
+ Q QP L P +PTLP + VL P Q TL P P +P
Sbjct: 930 HTVQNMRATPPQPAL--------PPQPTLPPQPVL----PPQPTLPPQPV--------LP 969
Query: 214 PQPFSSPLSPLVPPATLLVPYPVIVPLP-VPV-PIPIPIPMPQSS 256
PQP + P P++PP +L P PV+ P P +PV P P+ +P+ +
Sbjct: 970 PQP-TRPPQPVLPPQPMLPPQPVLPPQPALPVRPEPLQPHLPEQA 1013
Score = 50.1 bits (118), Expect = 5e-06
Identities = 49/176 (27%), Positives = 66/176 (37%), Gaps = 22/176 (12%)
Query: 137 PLVLPQEAPCSSSTIHNNLFQGAEDPEAQPQLLDLRIPSQPQEPTLPFEAVL-------- 188
P + P + P S N+ P PQ P P +PTLP + VL
Sbjct: 917 PQMAPTDVPPSPHHTVQNMRATPPQPALPPQPTLPPQPVLPPQPTLPPQPVLPPQPTRPP 976
Query: 189 QNLFPSQGTLGPPPCQPPPGYAPVPPQPFSSPL----SPLVPPATLLV-----PYPVIVP 239
Q + P Q L P P PP PV P+P L +P P + ++ PY V V
Sbjct: 977 QPVLPPQPMLPPQPVLPPQPALPVRPEPLQPHLPEQAAPAATPGSQILLGHPAPYAVDVA 1036
Query: 240 LPVP-VPIP----IPIPMPQSSESKFSSSFPKPPSSFGLHPFKGTQTPLEKDELKP 290
VP VP+P + P+P+ P+ PSS P + L P
Sbjct: 1037 AQVPTVPVPPAAVLSPPLPEVLLPAAPELLPQFPSSLATVSASVQSVPTQTATLLP 1092
Score = 39.7 bits (91), Expect = 0.007
Identities = 32/102 (31%), Positives = 42/102 (41%), Gaps = 12/102 (11%)
Query: 164 AQPQLLDLRIPSQPQEPT------LPFEAVLQNLFPSQGTLGPPPCQPPPGYAPVPPQPF 217
A QL L++P P +P +P V+ + P G G PP P A VPP P
Sbjct: 771 APAQLKPLQMPQAPLQPLAQVPPQMPPIPVVPPITPLAGIDGLPPALPDLPTATVPPVPP 830
Query: 218 SSPLSPLVPPATLLVPYPVIVP------LPVPVPIPIPIPMP 253
SP V +L P P P + +P P P+ MP
Sbjct: 831 PQYFSPAVILPSLAAPLPPASPALPLQAVKLPHPPGAPLAMP 872
Score = 38.9 bits (89), Expect = 0.012
Identities = 68/293 (23%), Positives = 105/293 (35%), Gaps = 51/293 (17%)
Query: 139 VLPQEAPCSSSTIHNNLFQGAEDPEAQPQLLDLRIPSQPQEPTLPFEAVLQNLFP----S 194
VLPQ P + + P A P L +P+ P+L Q FP S
Sbjct: 661 VLPQSLPSLGAY---------QQPTAAPGLPVGSVPAPACPPSL------QQHFPDPAMS 705
Query: 195 QGTLGPPPCQPPPGYA--PVPPQPFSSPLSPLVPPATLLVPYPVIVPLPVPVPIPIPIPM 252
+ PPP P P P PP PL+ P +L P PV+ PVP +P P
Sbjct: 706 FAPVLPPPSTPMPTGPGQPAPPGQQPPPLAQPTPLPQVLAPQPVVPLQPVPPHLP-PYLA 764
Query: 253 PQSSESKFSSSFPKPPSSFGLHPFKGTQTPLEKDELKPFDILQPKEYFQLSRHTVIKMGS 312
P S + P L P Q P ++ P ++ P I +
Sbjct: 765 PASQVGAPAQLKPLQMPQAPLQPL--AQVP---PQMPPIPVVPP-----------ITPLA 808
Query: 313 ENEALDLSMKSVPWLKAGEVSPPIFQEDAALDLSVAAHRKSEPPPETL------YDSGAS 366
+ L ++ +P V PP + A + S+AA P L + GA
Sbjct: 809 GIDGLPPALPDLPTATVPPVPPPQYFSPAVILPSLAAPLPPASPALPLQAVKLPHPPGAP 868
Query: 367 VDSSGHTVMEKLPSGMEISFAPATSHEAPAMMDSHISSSDAATEMLSQPNHPS 419
+ T++ P+ + P + P + + +S A ++ QP +P+
Sbjct: 869 LAMPCRTIVPNAPATI-----PLLAVAPPGV--AALSIHSAVAQLPGQPVYPA 914
Score = 30.4 bits (67), Expect = 4.2
Identities = 42/156 (26%), Positives = 51/156 (32%), Gaps = 15/156 (9%)
Query: 140 LPQEAPCSSSTIHNNLFQGAEDPE--AQPQLLDLRIPSQPQ----EPTLPFEAVLQNLFP 193
LP EA S+ + L E P A QLL PS P P P + L P
Sbjct: 1338 LPPEASQDSAPYKDQL-SSKEQPSFLASQQLLSQAGPSNPPGAPPAPLAPSSPPVTAL-P 1395
Query: 194 SQGTLGPPPCQPPPGYA-------PVPPQPFSSPLSPLVPPATLLVPYPVIVPLPVPVPI 246
G P P P PQ +S L P A + PL V +
Sbjct: 1396 QDGAAPATSTMPEPASGTASQAGGPGTPQGLTSELETSQPLAETHEAPLAVQPLVVGLAP 1455
Query: 247 PIPIPMPQSSESKFSSSFPKPPSSFGLHPFKGTQTP 282
P P S+ + P PP + P GT P
Sbjct: 1456 CTPAPEAASTRDASAPREPLPPPAPEPSPHSGTPQP 1491
>gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens]
Length = 1711
Score = 52.8 bits (125), Expect = 8e-07
Identities = 64/257 (24%), Positives = 99/257 (38%), Gaps = 19/257 (7%)
Query: 54 PAPSILNPPAESQSGMALKVAATVLQPLCLGESPVVMP----IHMQVEGSSAPELNPNGN 109
P P+ + PPA + + V PL + P +P + +QV +S P +P
Sbjct: 198 PLPAPICPPAPGSASVPHSVPDAFQVPLSV---PAPVPHSGLVPVQV-ATSVPAPSPP-L 252
Query: 110 ATYVMTTQGPVQLPVVLEQHVFQHLNSPLVLPQEA---PCSSSTIHNNLFQGAEDPEAQP 166
A P +P ++ +++ +++P A P + P + P
Sbjct: 253 APVPALAPAPPSVPTLISDSNPLSVSASVLVPVPASAPPSGPVPLSAPAPAPLSVPVSAP 312
Query: 167 QLLDLRIPSQPQEPTLPFEAVLQNLFPSQGTLGPPPCQPPPGYAPVPPQPFSSPLS-PLV 225
L ++ P P PTL V + PP PP P P S P S P +
Sbjct: 313 PLALIQAPVPPSAPTLVLAPVPTPVLAPMPASTPPAAPAPPSVPMPTPTPSSGPPSTPTL 372
Query: 226 PPATLLVPYPVIVPLPVPVPIPIPIPMPQSSESKFSSSFPKPPS-SFGLHPFKGTQTP-L 283
PA P P P P+ P P PMP ++ + +S P P S S F Q P +
Sbjct: 373 IPAFAPTPVPAPTPAPIFTPA--PTPMPAATPAAIPTSAPIPASFSLSRVCFPAAQAPAM 430
Query: 284 EKDEL--KPFDILQPKE 298
+K L +P +L P +
Sbjct: 431 QKVPLSFQPGTVLTPSQ 447
Score = 48.5 bits (114), Expect = 1e-05
Identities = 42/114 (36%), Positives = 48/114 (42%), Gaps = 14/114 (12%)
Query: 177 PQEPTLPFEAVLQNLFPSQGTLGPPPCQPPPGYAPVP---PQPFSSPLS-PLVPPATLLV 232
P E TLP V N P L P C P PG A VP P F PLS P P + LV
Sbjct: 184 PVEGTLPL--VTTNFSP----LPAPICPPAPGSASVPHSVPDAFQVPLSVPAPVPHSGLV 237
Query: 233 PYPVIVPLPVP----VPIPIPIPMPQSSESKFSSSFPKPPSSFGLHPFKGTQTP 282
P V +P P P+P P P S + S S P S+ L P + P
Sbjct: 238 PVQVATSVPAPSPPLAPVPALAPAPPSVPTLISDSNPLSVSASVLVPVPASAPP 291
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 51.6 bits (122), Expect = 2e-06
Identities = 49/149 (32%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 193 PSQGTLGPPPCQP--PPGYAPVP-PQ-PFSSPLSPLVPPATLLVPYPVIVPLPVPVPIP- 247
P G G PP P PPG P P P+ P ++ +P P L+ P P P P P +P
Sbjct: 261 PPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPP 320
Query: 248 --IPIPMPQSSESKFSSSFPKPPSSFGLHPFKGTQTPLEKDE-LKPFDILQPKEYFQLSR 304
P+ MP ++S + P P LH + TP++K L P +ILQ +EY +R
Sbjct: 321 AASPV-MPPQTQSPGQPAQPAP--MVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQAR 377
Query: 305 --HTVIKMGSENEAL--DLSMKSVPWLKA 329
H + ++ + +L DL K+ LKA
Sbjct: 378 IAHRIQELENLPGSLAGDLRTKATIELKA 406
>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform F [Homo sapiens]
Length = 1613
Score = 51.6 bits (122), Expect = 2e-06
Identities = 49/149 (32%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 193 PSQGTLGPPPCQP--PPGYAPVP-PQ-PFSSPLSPLVPPATLLVPYPVIVPLPVPVPIP- 247
P G G PP P PPG P P P+ P ++ +P P L+ P P P P P +P
Sbjct: 261 PPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPP 320
Query: 248 --IPIPMPQSSESKFSSSFPKPPSSFGLHPFKGTQTPLEKDE-LKPFDILQPKEYFQLSR 304
P+ MP ++S + P P LH + TP++K L P +ILQ +EY +R
Sbjct: 321 AASPV-MPPQTQSPGQPAQPAP--MVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQAR 377
Query: 305 --HTVIKMGSENEAL--DLSMKSVPWLKA 329
H + ++ + +L DL K+ LKA
Sbjct: 378 IAHRIQELENLPGSLAGDLRTKATIELKA 406
>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform E [Homo sapiens]
Length = 1614
Score = 51.6 bits (122), Expect = 2e-06
Identities = 49/149 (32%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 193 PSQGTLGPPPCQP--PPGYAPVP-PQ-PFSSPLSPLVPPATLLVPYPVIVPLPVPVPIP- 247
P G G PP P PPG P P P+ P ++ +P P L+ P P P P P +P
Sbjct: 261 PPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPP 320
Query: 248 --IPIPMPQSSESKFSSSFPKPPSSFGLHPFKGTQTPLEKDE-LKPFDILQPKEYFQLSR 304
P+ MP ++S + P P LH + TP++K L P +ILQ +EY +R
Sbjct: 321 AASPV-MPPQTQSPGQPAQPAP--MVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQAR 377
Query: 305 --HTVIKMGSENEAL--DLSMKSVPWLKA 329
H + ++ + +L DL K+ LKA
Sbjct: 378 IAHRIQELENLPGSLAGDLRTKATIELKA 406
>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform D [Homo sapiens]
Length = 1616
Score = 51.6 bits (122), Expect = 2e-06
Identities = 49/149 (32%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 193 PSQGTLGPPPCQP--PPGYAPVP-PQ-PFSSPLSPLVPPATLLVPYPVIVPLPVPVPIP- 247
P G G PP P PPG P P P+ P ++ +P P L+ P P P P P +P
Sbjct: 261 PPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPP 320
Query: 248 --IPIPMPQSSESKFSSSFPKPPSSFGLHPFKGTQTPLEKDE-LKPFDILQPKEYFQLSR 304
P+ MP ++S + P P LH + TP++K L P +ILQ +EY +R
Sbjct: 321 AASPV-MPPQTQSPGQPAQPAP--MVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQAR 377
Query: 305 --HTVIKMGSENEAL--DLSMKSVPWLKA 329
H + ++ + +L DL K+ LKA
Sbjct: 378 IAHRIQELENLPGSLAGDLRTKATIELKA 406
>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform C [Homo sapiens]
Length = 1617
Score = 51.6 bits (122), Expect = 2e-06
Identities = 49/149 (32%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 193 PSQGTLGPPPCQP--PPGYAPVP-PQ-PFSSPLSPLVPPATLLVPYPVIVPLPVPVPIP- 247
P G G PP P PPG P P P+ P ++ +P P L+ P P P P P +P
Sbjct: 261 PPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPP 320
Query: 248 --IPIPMPQSSESKFSSSFPKPPSSFGLHPFKGTQTPLEKDE-LKPFDILQPKEYFQLSR 304
P+ MP ++S + P P LH + TP++K L P +ILQ +EY +R
Sbjct: 321 AASPV-MPPQTQSPGQPAQPAP--MVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQAR 377
Query: 305 --HTVIKMGSENEAL--DLSMKSVPWLKA 329
H + ++ + +L DL K+ LKA
Sbjct: 378 IAHRIQELENLPGSLAGDLRTKATIELKA 406
>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 51.6 bits (122), Expect = 2e-06
Identities = 49/149 (32%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 193 PSQGTLGPPPCQP--PPGYAPVP-PQ-PFSSPLSPLVPPATLLVPYPVIVPLPVPVPIP- 247
P G G PP P PPG P P P+ P ++ +P P L+ P P P P P +P
Sbjct: 261 PPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPP 320
Query: 248 --IPIPMPQSSESKFSSSFPKPPSSFGLHPFKGTQTPLEKDE-LKPFDILQPKEYFQLSR 304
P+ MP ++S + P P LH + TP++K L P +ILQ +EY +R
Sbjct: 321 AASPV-MPPQTQSPGQPAQPAP--MVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQAR 377
Query: 305 --HTVIKMGSENEAL--DLSMKSVPWLKA 329
H + ++ + +L DL K+ LKA
Sbjct: 378 IAHRIQELENLPGSLAGDLRTKATIELKA 406
>gi|21071056 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 51.6 bits (122), Expect = 2e-06
Identities = 49/149 (32%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 193 PSQGTLGPPPCQP--PPGYAPVP-PQ-PFSSPLSPLVPPATLLVPYPVIVPLPVPVPIP- 247
P G G PP P PPG P P P+ P ++ +P P L+ P P P P P +P
Sbjct: 261 PPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPP 320
Query: 248 --IPIPMPQSSESKFSSSFPKPPSSFGLHPFKGTQTPLEKDE-LKPFDILQPKEYFQLSR 304
P+ MP ++S + P P LH + TP++K L P +ILQ +EY +R
Sbjct: 321 AASPV-MPPQTQSPGQPAQPAP--MVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQAR 377
Query: 305 --HTVIKMGSENEAL--DLSMKSVPWLKA 329
H + ++ + +L DL K+ LKA
Sbjct: 378 IAHRIQELENLPGSLAGDLRTKATIELKA 406
>gi|14602439 Williams Beuren syndrome chromosome region 14 isoform
delta [Homo sapiens]
Length = 831
Score = 51.2 bits (121), Expect = 2e-06
Identities = 74/268 (27%), Positives = 97/268 (36%), Gaps = 65/268 (24%)
Query: 48 KALVTVPAPSILNPPAESQSGMAL--------KVAATVLQPLCLGESPVVMPIHMQVEGS 99
K L + P +L P E G L ++ T+ G SP+ +P
Sbjct: 219 KQLFSSVVPVLLGDPEEEPGGRQLLDLNCFLSDISDTLFTMTQSGPSPLQLP-------- 270
Query: 100 SAPELNPNGNATYVMTTQGPVQ--LPVVLEQHVFQHLNSPLVLPQ-----EAPCSSSTIH 152
PE GNA + P+Q L ++ F NS L P P S S +
Sbjct: 271 --PEDAYVGNADMIQPDLTPLQPSLDDFMDISDF-FTNSRLPQPPMPSNFPEPPSFSPVV 327
Query: 153 NNLFQ----GAEDPEAQPQLLDLRIPSQPQEPT-----LPFEAVLQNLF----PSQGTLG 199
++LF G E P A + L S+ Q L A L + F + L
Sbjct: 328 DSLFSSGTLGPEVPPASSAMTHLSGHSRLQARNSCPGPLDSSAFLSSDFLLPEDPKPRLP 387
Query: 200 PPPCQPP----------PGYAPVPPQPFSSPLSPLVPPATLL---------VPYPVIVPL 240
PPP PP PG P PP PF P+ PP LL P+P + P
Sbjct: 388 PPPVPPPLLHYPPPAKVPGLEPCPPPPFP----PMAPPTALLQEEPLFSPRFPFPTVPPA 443
Query: 241 PVPVPIPIPI---PMPQSSESKFSSSFP 265
P P+P P P PQS S + FP
Sbjct: 444 PGVSPLPAPAAFPPTPQSVPSPAPTPFP 471
Score = 47.0 bits (110), Expect = 4e-05
Identities = 72/280 (25%), Positives = 98/280 (35%), Gaps = 44/280 (15%)
Query: 17 PPALANNRLENGMAQLITTEAWNINSTDLVKKALVTVPAPSILNPPAESQSGMA--LKVA 74
P L + E G QL+ + + +D + + P+P L PP ++ G A ++
Sbjct: 227 PVLLGDPEEEPGGRQLLDLNCFLSDISDTLFTMTQSGPSPLQL-PPEDAYVGNADMIQPD 285
Query: 75 ATVLQPLC---------LGESPVVMPIHMQVEGSSAPELNPNGNATYVMTTQGPVQLPVV 125
T LQP S + P M P +P ++ + T GP P
Sbjct: 286 LTPLQPSLDDFMDISDFFTNSRLPQP-PMPSNFPEPPSFSPVVDSLFSSGTLGPEVPPAS 344
Query: 126 LEQ-HVFQHLNSPLVLPQEAPCSSSTIHNNLFQGAEDPEAQPQLLDLRIPSQPQEPTLPF 184
H+ H P SS ++ F EDP+ R+P P P L
Sbjct: 345 SAMTHLSGHSRLQARNSCPGPLDSSAFLSSDFLLPEDPKP-------RLPPPPVPPPL-- 395
Query: 185 EAVLQNLFPSQGTLGPPPCQPPPGYAPVPP------QPFSSPLSPL--VPPATLLVPYPV 236
+ P G PC PPP PP +P SP P VPPA + P P
Sbjct: 396 ----LHYPPPAKVPGLEPCPPPPFPPMAPPTALLQEEPLFSPRFPFPTVPPAPGVSPLPA 451
Query: 237 ---------IVPLPVPVPIPIPIPMPQSSESKFSSSFPKP 267
VP P P P PI + SE F F P
Sbjct: 452 PAAFPPTPQSVPSPAPTPFPIELLPLGYSEPAFGPCFSMP 491
Score = 40.4 bits (93), Expect = 0.004
Identities = 56/217 (25%), Positives = 76/217 (35%), Gaps = 32/217 (14%)
Query: 54 PAPSILNPPAESQSGMALKVAATVLQPLCLGESPVVMPIHMQVEGSSAPELNPNGNATYV 113
P P++ PPA S + A +P PI + G S P P
Sbjct: 436 PFPTV--PPAPGVSPLPAPAAFPPTPQSVPSPAPTPFPIELLPLGYSEPAFGP-----CF 488
Query: 114 MTTQGPVQLPVVLEQHVFQHLNSPLVLPQEAPCSSSTIHNNLFQGAEDPEAQPQLLDLRI 173
+G P Q + P + P A ++ NN QLL
Sbjct: 489 SMPRGKPPAPSPRGQKA----SPPTLAPATASPPTTAGSNN--------PCLTQLLTAAK 536
Query: 174 PSQPQEPTLPFEAVLQNLFPSQGTLGPPPCQPPPGYAPVPPQPFSSPLSPLVPPATLLVP 233
P Q EP L +L++ Q T+ PC +PP P +P P PATL
Sbjct: 537 PEQALEPPLVSSTLLRSPGSPQETVPEFPC------TFLPPTPAPTPPRPPPGPATLAPS 590
Query: 234 YPVIVPLPVPVPIPIPIPMPQSSESKFS---SSFPKP 267
P++VP + P P SE + S SS P P
Sbjct: 591 RPLLVPKAE----RLSPPAPSGSERRLSGDLSSMPGP 623
>gi|14602437 Williams Beuren syndrome chromosome region 14 isoform
gamma [Homo sapiens]
Length = 850
Score = 51.2 bits (121), Expect = 2e-06
Identities = 74/268 (27%), Positives = 97/268 (36%), Gaps = 65/268 (24%)
Query: 48 KALVTVPAPSILNPPAESQSGMAL--------KVAATVLQPLCLGESPVVMPIHMQVEGS 99
K L + P +L P E G L ++ T+ G SP+ +P
Sbjct: 219 KQLFSSVVPVLLGDPEEEPGGRQLLDLNCFLSDISDTLFTMTQSGPSPLQLP-------- 270
Query: 100 SAPELNPNGNATYVMTTQGPVQ--LPVVLEQHVFQHLNSPLVLPQ-----EAPCSSSTIH 152
PE GNA + P+Q L ++ F NS L P P S S +
Sbjct: 271 --PEDAYVGNADMIQPDLTPLQPSLDDFMDISDF-FTNSRLPQPPMPSNFPEPPSFSPVV 327
Query: 153 NNLFQ----GAEDPEAQPQLLDLRIPSQPQEPT-----LPFEAVLQNLF----PSQGTLG 199
++LF G E P A + L S+ Q L A L + F + L
Sbjct: 328 DSLFSSGTLGPEVPPASSAMTHLSGHSRLQARNSCPGPLDSSAFLSSDFLLPEDPKPRLP 387
Query: 200 PPPCQPP----------PGYAPVPPQPFSSPLSPLVPPATLL---------VPYPVIVPL 240
PPP PP PG P PP PF P+ PP LL P+P + P
Sbjct: 388 PPPVPPPLLHYPPPAKVPGLEPCPPPPFP----PMAPPTALLQEEPLFSPRFPFPTVPPA 443
Query: 241 PVPVPIPIPI---PMPQSSESKFSSSFP 265
P P+P P P PQS S + FP
Sbjct: 444 PGVSPLPAPAAFPPTPQSVPSPAPTPFP 471
Score = 47.0 bits (110), Expect = 4e-05
Identities = 72/280 (25%), Positives = 98/280 (35%), Gaps = 44/280 (15%)
Query: 17 PPALANNRLENGMAQLITTEAWNINSTDLVKKALVTVPAPSILNPPAESQSGMA--LKVA 74
P L + E G QL+ + + +D + + P+P L PP ++ G A ++
Sbjct: 227 PVLLGDPEEEPGGRQLLDLNCFLSDISDTLFTMTQSGPSPLQL-PPEDAYVGNADMIQPD 285
Query: 75 ATVLQPLC---------LGESPVVMPIHMQVEGSSAPELNPNGNATYVMTTQGPVQLPVV 125
T LQP S + P M P +P ++ + T GP P
Sbjct: 286 LTPLQPSLDDFMDISDFFTNSRLPQP-PMPSNFPEPPSFSPVVDSLFSSGTLGPEVPPAS 344
Query: 126 LEQ-HVFQHLNSPLVLPQEAPCSSSTIHNNLFQGAEDPEAQPQLLDLRIPSQPQEPTLPF 184
H+ H P SS ++ F EDP+ R+P P P L
Sbjct: 345 SAMTHLSGHSRLQARNSCPGPLDSSAFLSSDFLLPEDPKP-------RLPPPPVPPPL-- 395
Query: 185 EAVLQNLFPSQGTLGPPPCQPPPGYAPVPP------QPFSSPLSPL--VPPATLLVPYPV 236
+ P G PC PPP PP +P SP P VPPA + P P
Sbjct: 396 ----LHYPPPAKVPGLEPCPPPPFPPMAPPTALLQEEPLFSPRFPFPTVPPAPGVSPLPA 451
Query: 237 ---------IVPLPVPVPIPIPIPMPQSSESKFSSSFPKP 267
VP P P P PI + SE F F P
Sbjct: 452 PAAFPPTPQSVPSPAPTPFPIELLPLGYSEPAFGPCFSMP 491
Score = 40.4 bits (93), Expect = 0.004
Identities = 56/217 (25%), Positives = 76/217 (35%), Gaps = 32/217 (14%)
Query: 54 PAPSILNPPAESQSGMALKVAATVLQPLCLGESPVVMPIHMQVEGSSAPELNPNGNATYV 113
P P++ PPA S + A +P PI + G S P P
Sbjct: 436 PFPTV--PPAPGVSPLPAPAAFPPTPQSVPSPAPTPFPIELLPLGYSEPAFGP-----CF 488
Query: 114 MTTQGPVQLPVVLEQHVFQHLNSPLVLPQEAPCSSSTIHNNLFQGAEDPEAQPQLLDLRI 173
+G P Q + P + P A ++ NN QLL
Sbjct: 489 SMPRGKPPAPSPRGQKA----SPPTLAPATASPPTTAGSNN--------PCLTQLLTAAK 536
Query: 174 PSQPQEPTLPFEAVLQNLFPSQGTLGPPPCQPPPGYAPVPPQPFSSPLSPLVPPATLLVP 233
P Q EP L +L++ Q T+ PC +PP P +P P PATL
Sbjct: 537 PEQALEPPLVSSTLLRSPGSPQETVPEFPC------TFLPPTPAPTPPRPPPGPATLAPS 590
Query: 234 YPVIVPLPVPVPIPIPIPMPQSSESKFS---SSFPKP 267
P++VP + P P SE + S SS P P
Sbjct: 591 RPLLVPKAE----RLSPPAPSGSERRLSGDLSSMPGP 623
>gi|14602435 Williams Beuren syndrome chromosome region 14 isoform
beta [Homo sapiens]
Length = 833
Score = 51.2 bits (121), Expect = 2e-06
Identities = 74/268 (27%), Positives = 97/268 (36%), Gaps = 65/268 (24%)
Query: 48 KALVTVPAPSILNPPAESQSGMAL--------KVAATVLQPLCLGESPVVMPIHMQVEGS 99
K L + P +L P E G L ++ T+ G SP+ +P
Sbjct: 219 KQLFSSVVPVLLGDPEEEPGGRQLLDLNCFLSDISDTLFTMTQSGPSPLQLP-------- 270
Query: 100 SAPELNPNGNATYVMTTQGPVQ--LPVVLEQHVFQHLNSPLVLPQ-----EAPCSSSTIH 152
PE GNA + P+Q L ++ F NS L P P S S +
Sbjct: 271 --PEDAYVGNADMIQPDLTPLQPSLDDFMDISDF-FTNSRLPQPPMPSNFPEPPSFSPVV 327
Query: 153 NNLFQ----GAEDPEAQPQLLDLRIPSQPQEPT-----LPFEAVLQNLF----PSQGTLG 199
++LF G E P A + L S+ Q L A L + F + L
Sbjct: 328 DSLFSSGTLGPEVPPASSAMTHLSGHSRLQARNSCPGPLDSSAFLSSDFLLPEDPKPRLP 387
Query: 200 PPPCQPP----------PGYAPVPPQPFSSPLSPLVPPATLL---------VPYPVIVPL 240
PPP PP PG P PP PF P+ PP LL P+P + P
Sbjct: 388 PPPVPPPLLHYPPPAKVPGLEPCPPPPFP----PMAPPTALLQEEPLFSPRFPFPTVPPA 443
Query: 241 PVPVPIPIPI---PMPQSSESKFSSSFP 265
P P+P P P PQS S + FP
Sbjct: 444 PGVSPLPAPAAFPPTPQSVPSPAPTPFP 471
Score = 47.0 bits (110), Expect = 4e-05
Identities = 72/280 (25%), Positives = 98/280 (35%), Gaps = 44/280 (15%)
Query: 17 PPALANNRLENGMAQLITTEAWNINSTDLVKKALVTVPAPSILNPPAESQSGMA--LKVA 74
P L + E G QL+ + + +D + + P+P L PP ++ G A ++
Sbjct: 227 PVLLGDPEEEPGGRQLLDLNCFLSDISDTLFTMTQSGPSPLQL-PPEDAYVGNADMIQPD 285
Query: 75 ATVLQPLC---------LGESPVVMPIHMQVEGSSAPELNPNGNATYVMTTQGPVQLPVV 125
T LQP S + P M P +P ++ + T GP P
Sbjct: 286 LTPLQPSLDDFMDISDFFTNSRLPQP-PMPSNFPEPPSFSPVVDSLFSSGTLGPEVPPAS 344
Query: 126 LEQ-HVFQHLNSPLVLPQEAPCSSSTIHNNLFQGAEDPEAQPQLLDLRIPSQPQEPTLPF 184
H+ H P SS ++ F EDP+ R+P P P L
Sbjct: 345 SAMTHLSGHSRLQARNSCPGPLDSSAFLSSDFLLPEDPKP-------RLPPPPVPPPL-- 395
Query: 185 EAVLQNLFPSQGTLGPPPCQPPPGYAPVPP------QPFSSPLSPL--VPPATLLVPYPV 236
+ P G PC PPP PP +P SP P VPPA + P P
Sbjct: 396 ----LHYPPPAKVPGLEPCPPPPFPPMAPPTALLQEEPLFSPRFPFPTVPPAPGVSPLPA 451
Query: 237 ---------IVPLPVPVPIPIPIPMPQSSESKFSSSFPKP 267
VP P P P PI + SE F F P
Sbjct: 452 PAAFPPTPQSVPSPAPTPFPIELLPLGYSEPAFGPCFSMP 491
Score = 40.4 bits (93), Expect = 0.004
Identities = 56/217 (25%), Positives = 76/217 (35%), Gaps = 32/217 (14%)
Query: 54 PAPSILNPPAESQSGMALKVAATVLQPLCLGESPVVMPIHMQVEGSSAPELNPNGNATYV 113
P P++ PPA S + A +P PI + G S P P
Sbjct: 436 PFPTV--PPAPGVSPLPAPAAFPPTPQSVPSPAPTPFPIELLPLGYSEPAFGP-----CF 488
Query: 114 MTTQGPVQLPVVLEQHVFQHLNSPLVLPQEAPCSSSTIHNNLFQGAEDPEAQPQLLDLRI 173
+G P Q + P + P A ++ NN QLL
Sbjct: 489 SMPRGKPPAPSPRGQKA----SPPTLAPATASPPTTAGSNN--------PCLTQLLTAAK 536
Query: 174 PSQPQEPTLPFEAVLQNLFPSQGTLGPPPCQPPPGYAPVPPQPFSSPLSPLVPPATLLVP 233
P Q EP L +L++ Q T+ PC +PP P +P P PATL
Sbjct: 537 PEQALEPPLVSSTLLRSPGSPQETVPEFPC------TFLPPTPAPTPPRPPPGPATLAPS 590
Query: 234 YPVIVPLPVPVPIPIPIPMPQSSESKFS---SSFPKP 267
P++VP + P P SE + S SS P P
Sbjct: 591 RPLLVPKAE----RLSPPAPSGSERRLSGDLSSMPGP 623
>gi|14602433 Williams Beuren syndrome chromosome region 14 isoform
alpha [Homo sapiens]
Length = 852
Score = 51.2 bits (121), Expect = 2e-06
Identities = 74/268 (27%), Positives = 97/268 (36%), Gaps = 65/268 (24%)
Query: 48 KALVTVPAPSILNPPAESQSGMAL--------KVAATVLQPLCLGESPVVMPIHMQVEGS 99
K L + P +L P E G L ++ T+ G SP+ +P
Sbjct: 219 KQLFSSVVPVLLGDPEEEPGGRQLLDLNCFLSDISDTLFTMTQSGPSPLQLP-------- 270
Query: 100 SAPELNPNGNATYVMTTQGPVQ--LPVVLEQHVFQHLNSPLVLPQ-----EAPCSSSTIH 152
PE GNA + P+Q L ++ F NS L P P S S +
Sbjct: 271 --PEDAYVGNADMIQPDLTPLQPSLDDFMDISDF-FTNSRLPQPPMPSNFPEPPSFSPVV 327
Query: 153 NNLFQ----GAEDPEAQPQLLDLRIPSQPQEPT-----LPFEAVLQNLF----PSQGTLG 199
++LF G E P A + L S+ Q L A L + F + L
Sbjct: 328 DSLFSSGTLGPEVPPASSAMTHLSGHSRLQARNSCPGPLDSSAFLSSDFLLPEDPKPRLP 387
Query: 200 PPPCQPP----------PGYAPVPPQPFSSPLSPLVPPATLL---------VPYPVIVPL 240
PPP PP PG P PP PF P+ PP LL P+P + P
Sbjct: 388 PPPVPPPLLHYPPPAKVPGLEPCPPPPFP----PMAPPTALLQEEPLFSPRFPFPTVPPA 443
Query: 241 PVPVPIPIPI---PMPQSSESKFSSSFP 265
P P+P P P PQS S + FP
Sbjct: 444 PGVSPLPAPAAFPPTPQSVPSPAPTPFP 471
Score = 47.0 bits (110), Expect = 4e-05
Identities = 72/280 (25%), Positives = 98/280 (35%), Gaps = 44/280 (15%)
Query: 17 PPALANNRLENGMAQLITTEAWNINSTDLVKKALVTVPAPSILNPPAESQSGMA--LKVA 74
P L + E G QL+ + + +D + + P+P L PP ++ G A ++
Sbjct: 227 PVLLGDPEEEPGGRQLLDLNCFLSDISDTLFTMTQSGPSPLQL-PPEDAYVGNADMIQPD 285
Query: 75 ATVLQPLC---------LGESPVVMPIHMQVEGSSAPELNPNGNATYVMTTQGPVQLPVV 125
T LQP S + P M P +P ++ + T GP P
Sbjct: 286 LTPLQPSLDDFMDISDFFTNSRLPQP-PMPSNFPEPPSFSPVVDSLFSSGTLGPEVPPAS 344
Query: 126 LEQ-HVFQHLNSPLVLPQEAPCSSSTIHNNLFQGAEDPEAQPQLLDLRIPSQPQEPTLPF 184
H+ H P SS ++ F EDP+ R+P P P L
Sbjct: 345 SAMTHLSGHSRLQARNSCPGPLDSSAFLSSDFLLPEDPKP-------RLPPPPVPPPL-- 395
Query: 185 EAVLQNLFPSQGTLGPPPCQPPPGYAPVPP------QPFSSPLSPL--VPPATLLVPYPV 236
+ P G PC PPP PP +P SP P VPPA + P P
Sbjct: 396 ----LHYPPPAKVPGLEPCPPPPFPPMAPPTALLQEEPLFSPRFPFPTVPPAPGVSPLPA 451
Query: 237 ---------IVPLPVPVPIPIPIPMPQSSESKFSSSFPKP 267
VP P P P PI + SE F F P
Sbjct: 452 PAAFPPTPQSVPSPAPTPFPIELLPLGYSEPAFGPCFSMP 491
Score = 40.4 bits (93), Expect = 0.004
Identities = 56/217 (25%), Positives = 76/217 (35%), Gaps = 32/217 (14%)
Query: 54 PAPSILNPPAESQSGMALKVAATVLQPLCLGESPVVMPIHMQVEGSSAPELNPNGNATYV 113
P P++ PPA S + A +P PI + G S P P
Sbjct: 436 PFPTV--PPAPGVSPLPAPAAFPPTPQSVPSPAPTPFPIELLPLGYSEPAFGP-----CF 488
Query: 114 MTTQGPVQLPVVLEQHVFQHLNSPLVLPQEAPCSSSTIHNNLFQGAEDPEAQPQLLDLRI 173
+G P Q + P + P A ++ NN QLL
Sbjct: 489 SMPRGKPPAPSPRGQKA----SPPTLAPATASPPTTAGSNN--------PCLTQLLTAAK 536
Query: 174 PSQPQEPTLPFEAVLQNLFPSQGTLGPPPCQPPPGYAPVPPQPFSSPLSPLVPPATLLVP 233
P Q EP L +L++ Q T+ PC +PP P +P P PATL
Sbjct: 537 PEQALEPPLVSSTLLRSPGSPQETVPEFPC------TFLPPTPAPTPPRPPPGPATLAPS 590
Query: 234 YPVIVPLPVPVPIPIPIPMPQSSESKFS---SSFPKP 267
P++VP + P P SE + S SS P P
Sbjct: 591 RPLLVPKAE----RLSPPAPSGSERRLSGDLSSMPGP 623
>gi|19923345 RNA binding motif protein 12 [Homo sapiens]
Length = 932
Score = 50.4 bits (119), Expect = 4e-06
Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 9/130 (6%)
Query: 184 FEAVLQNLFPSQGTLGPPPCQPPPGYAPVPPQPFSSPLSPLVPPATLLVPYPVIVPLPVP 243
F + + + T+ PPP P P +PP P P+ P+ PP L P P + P+P P
Sbjct: 171 FSSTVPSTASPMNTVPPPPIPPIPAMPSLPPMPSIPPI-PVPPPVPTLPPVPPVPPIP-P 228
Query: 244 VP-IPIPIPMPQSSESKFSSSFPKPPSSFGLHPFKGTQTPLE-KDELKPFDI--LQPKEY 299
VP +P P+P S + P P G++ G+ P+ + L P + L P
Sbjct: 229 VPSVPPMTPLPPMSGMPPLNPPPVAPLPAGMN---GSGAPMNLNNNLNPMFLGPLNPVNP 285
Query: 300 FQLSRHTVIK 309
Q++ + +K
Sbjct: 286 IQMNSQSSVK 295
Score = 42.4 bits (98), Expect = 0.001
Identities = 43/143 (30%), Positives = 59/143 (41%), Gaps = 7/143 (4%)
Query: 177 PQEPTLPFEAVLQNLFPSQGTLGPPPCQPP-PGYAPVPPQPFSSPLSPLVPPATLLVPYP 235
P P P A+ P ++ P P PP P PVPP P P+ P VPP T L P
Sbjct: 186 PPPPIPPIPAMPS--LPPMPSIPPIPVPPPVPTLPPVPPVPPIPPV-PSVPPMTPLPPMS 242
Query: 236 VIVPLPVPVPIPIPIPMPQSSESKFSSSFPKPPSSFGLHPFKGTQTPLEKDELKPFDILQ 295
+ PL P P+P M S ++ P L+P Q + +KP I
Sbjct: 243 GMPPLNPPPVAPLPAGMNGSGAPMNLNNNLNPMFLGPLNPVNPIQMN-SQSSVKPLPI-N 300
Query: 296 PKEYFQLSRHTVIKMGSENEALD 318
P + + +S H + EN+ D
Sbjct: 301 PDDLY-VSVHGMPFSAMENDVRD 322
Score = 36.6 bits (83), Expect = 0.058
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Query: 173 IPSQPQEPTLPFEAVLQNLFPSQGTLGPPPCQPP-PGYAPVPPQPFSSPLSPLVPPATLL 231
IP+ P P +P P P P PP P P+PP P P++PL PP + +
Sbjct: 193 IPAMPSLPPMPS-------IPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTPL-PPMSGM 244
Query: 232 VPY--PVIVPLP 241
P P + PLP
Sbjct: 245 PPLNPPPVAPLP 256
>gi|23510462 RNA binding motif protein 12 [Homo sapiens]
Length = 932
Score = 50.4 bits (119), Expect = 4e-06
Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 9/130 (6%)
Query: 184 FEAVLQNLFPSQGTLGPPPCQPPPGYAPVPPQPFSSPLSPLVPPATLLVPYPVIVPLPVP 243
F + + + T+ PPP P P +PP P P+ P+ PP L P P + P+P P
Sbjct: 171 FSSTVPSTASPMNTVPPPPIPPIPAMPSLPPMPSIPPI-PVPPPVPTLPPVPPVPPIP-P 228
Query: 244 VP-IPIPIPMPQSSESKFSSSFPKPPSSFGLHPFKGTQTPLE-KDELKPFDI--LQPKEY 299
VP +P P+P S + P P G++ G+ P+ + L P + L P
Sbjct: 229 VPSVPPMTPLPPMSGMPPLNPPPVAPLPAGMN---GSGAPMNLNNNLNPMFLGPLNPVNP 285
Query: 300 FQLSRHTVIK 309
Q++ + +K
Sbjct: 286 IQMNSQSSVK 295
Score = 42.4 bits (98), Expect = 0.001
Identities = 43/143 (30%), Positives = 59/143 (41%), Gaps = 7/143 (4%)
Query: 177 PQEPTLPFEAVLQNLFPSQGTLGPPPCQPP-PGYAPVPPQPFSSPLSPLVPPATLLVPYP 235
P P P A+ P ++ P P PP P PVPP P P+ P VPP T L P
Sbjct: 186 PPPPIPPIPAMPS--LPPMPSIPPIPVPPPVPTLPPVPPVPPIPPV-PSVPPMTPLPPMS 242
Query: 236 VIVPLPVPVPIPIPIPMPQSSESKFSSSFPKPPSSFGLHPFKGTQTPLEKDELKPFDILQ 295
+ PL P P+P M S ++ P L+P Q + +KP I
Sbjct: 243 GMPPLNPPPVAPLPAGMNGSGAPMNLNNNLNPMFLGPLNPVNPIQMN-SQSSVKPLPI-N 300
Query: 296 PKEYFQLSRHTVIKMGSENEALD 318
P + + +S H + EN+ D
Sbjct: 301 PDDLY-VSVHGMPFSAMENDVRD 322
Score = 36.6 bits (83), Expect = 0.058
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Query: 173 IPSQPQEPTLPFEAVLQNLFPSQGTLGPPPCQPP-PGYAPVPPQPFSSPLSPLVPPATLL 231
IP+ P P +P P P P PP P P+PP P P++PL PP + +
Sbjct: 193 IPAMPSLPPMPS-------IPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTPL-PPMSGM 244
Query: 232 VPY--PVIVPLP 241
P P + PLP
Sbjct: 245 PPLNPPPVAPLP 256
>gi|155030236 ribonuclease III, nuclear isoform 2 [Homo sapiens]
Length = 1337
Score = 48.9 bits (115), Expect = 1e-05
Identities = 39/128 (30%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 162 PEAQPQLLDLRIPSQP------QEPTLPF----EAVLQNLFPSQGTLGP-PPCQPPPGYA 210
P +PQ L L P QP + P+ P + N P + P PP PP
Sbjct: 32 PSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQG 91
Query: 211 PVPPQPFSSPLSPLVPPATLLVPYPV---IVPLPVPVPIPIPIPMPQSSESKFSSSFPKP 267
P+PP P+ P P + P+PV P+P P+P P P+P + + + F P
Sbjct: 92 PLPP----CPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMMP 147
Query: 268 PSSFGLHP 275
P S HP
Sbjct: 148 PPSMP-HP 154
Score = 34.7 bits (78), Expect = 0.22
Identities = 56/214 (26%), Positives = 74/214 (34%), Gaps = 35/214 (16%)
Query: 100 SAPELNPNGNATYVMTTQGPVQL---PVVLEQHVFQHLNSPLVLPQEAPCSSSTIHNNLF 156
SAP P N + Q PVQ P F + +P LP F
Sbjct: 30 SAPSFRPQ-NLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVP-------F 81
Query: 157 QGAEDPEAQPQLLDLRIPSQPQEPTLPFEAVLQNLFPSQGTLGP-PPCQPPPGYAPVPPQ 215
P AQ L P P P P +++ FP P PP P P PVP
Sbjct: 82 PPPMPPSAQGPL-----PPCPIRPPFPNHQ-MRHPFPVPPCFPPMPPPMPCPNNPPVPGA 135
Query: 216 PFSSPLSPLV--PPATLLVPYPVIVPLPVPVPIP-------IPIPMPQSSESKFSSSFPK 266
P P + PP+ P P ++P V P P P S ++ SS P
Sbjct: 136 PPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPS 195
Query: 267 PPSSFGLH-----PFKGTQTPLEK---DELKPFD 292
+S H P+ + P E+ + LK +D
Sbjct: 196 ANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYD 229
>gi|155030234 ribonuclease III, nuclear isoform 1 [Homo sapiens]
Length = 1374
Score = 48.9 bits (115), Expect = 1e-05
Identities = 39/128 (30%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 162 PEAQPQLLDLRIPSQP------QEPTLPF----EAVLQNLFPSQGTLGP-PPCQPPPGYA 210
P +PQ L L P QP + P+ P + N P + P PP PP
Sbjct: 32 PSFRPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQG 91
Query: 211 PVPPQPFSSPLSPLVPPATLLVPYPV---IVPLPVPVPIPIPIPMPQSSESKFSSSFPKP 267
P+PP P+ P P + P+PV P+P P+P P P+P + + + F P
Sbjct: 92 PLPP----CPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMMP 147
Query: 268 PSSFGLHP 275
P S HP
Sbjct: 148 PPSMP-HP 154
Score = 34.7 bits (78), Expect = 0.22
Identities = 56/214 (26%), Positives = 74/214 (34%), Gaps = 35/214 (16%)
Query: 100 SAPELNPNGNATYVMTTQGPVQL---PVVLEQHVFQHLNSPLVLPQEAPCSSSTIHNNLF 156
SAP P N + Q PVQ P F + +P LP F
Sbjct: 30 SAPSFRPQ-NLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVP-------F 81
Query: 157 QGAEDPEAQPQLLDLRIPSQPQEPTLPFEAVLQNLFPSQGTLGP-PPCQPPPGYAPVPPQ 215
P AQ L P P P P +++ FP P PP P P PVP
Sbjct: 82 PPPMPPSAQGPL-----PPCPIRPPFPNHQ-MRHPFPVPPCFPPMPPPMPCPNNPPVPGA 135
Query: 216 PFSSPLSPLV--PPATLLVPYPVIVPLPVPVPIP-------IPIPMPQSSESKFSSSFPK 266
P P + PP+ P P ++P V P P P S ++ SS P
Sbjct: 136 PPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPS 195
Query: 267 PPSSFGLH-----PFKGTQTPLEK---DELKPFD 292
+S H P+ + P E+ + LK +D
Sbjct: 196 ANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYD 229
>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
Length = 3571
Score = 48.9 bits (115), Expect = 1e-05
Identities = 35/101 (34%), Positives = 43/101 (42%), Gaps = 16/101 (15%)
Query: 200 PPPCQPPPGYAPVPPQPFSSPLSPLVPPATLLVPYPVIVPLPVPVPIPIPIPMPQSSESK 259
PPP PPP P PPQP S + P+ P T+ P P P P P P P P P
Sbjct: 1958 PPPPPPPPPLPPAPPQP--SSMGPVKIPNTVSTPLQAPPPTPPPPPPPPPPPPP------ 2009
Query: 260 FSSSFPKPPSSFGLHPFKGTQTPLEKD-ELKPFDILQPKEY 299
P PP P Q P+ D L P ++QP ++
Sbjct: 2010 -----PPPPPPPSAPP--QVQLPVSLDLPLFPSIMMQPVQH 2043
Score = 39.3 bits (90), Expect = 0.009
Identities = 38/138 (27%), Positives = 56/138 (40%), Gaps = 18/138 (13%)
Query: 162 PEAQPQLLDLRIPSQPQEPTLPFEAVLQNLFPSQGTLGPPPCQPPPGYAPVPPQPFSSPL 221
P A PQ + P + P +A T PPP PPP P PP P S+P
Sbjct: 1968 PPAPPQPSSMGPVKIPNTVSTPLQA-------PPPTPPPPPPPPPPPPPPPPPPPPSAPP 2020
Query: 222 SPLVPPATLLVPYPVIVPLPV---PVPIPIPIPMPQSSESKFSSSFPKPPSSFGLHP--- 275
+P + L +P I+ PV +P + + +PQ ++ + GL P
Sbjct: 2021 QVQLPVSLDLPLFPSIMMQPVQHPALPPQLALQLPQ-MDALSADLTQLCQQQLGLDPNFL 2079
Query: 276 ----FKGTQTPLEKDELK 289
FK +T + D+LK
Sbjct: 2080 RHSQFKRPRTRITDDQLK 2097
Score = 34.3 bits (77), Expect = 0.29
Identities = 23/75 (30%), Positives = 29/75 (38%), Gaps = 4/75 (5%)
Query: 174 PSQPQEPTLPFEAVLQNLFPSQGTLGPPPCQPPPGYAPVPPQPFSSPLSPLVPPATLLVP 233
P P P P + T+ P PPP P PP P P P PP +
Sbjct: 1962 PPPPPLPPAPPQPSSMGPVKIPNTVSTPLQAPPPTPPPPPPPPPPPPPPPPPPPPSA--- 2018
Query: 234 YPVIVPLPVPVPIPI 248
P V LPV + +P+
Sbjct: 2019 -PPQVQLPVSLDLPL 2032
Score = 30.4 bits (67), Expect = 4.2
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 8/71 (11%)
Query: 160 EDPEAQPQLLDLRIPSQPQEPTLPFEAVLQNLFPSQGTLGPPPCQPPPGYAPV----PPQ 215
E P +P+ D PSQ +P LP + + P Q + P QP P P PP
Sbjct: 2362 EYPAEKPKQSDPSPPSQGTKPALPLASTSSD--PPQASTAQPQPQPQPPKQPQLIGRPPS 2419
Query: 216 PFSSPL--SPL 224
+P+ SPL
Sbjct: 2420 ASQTPVPSSPL 2430
>gi|62460633 RNA-binding motif protein 16 [Homo sapiens]
Length = 1271
Score = 48.5 bits (114), Expect = 1e-05
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 166 PQLLDLRIPSQPQEPTLPFEAVLQNLFPSQGTLGPPPCQPPPGYAPVPPQPF-SSPLSPL 224
P + L+IP P PT+ +L P + P PPPG++P+PP PF + +P
Sbjct: 636 PPVAMLQIPVAPAVPTV-------SLVPPAFPVSMPV--PPPGFSPIPPPPFLRASFNPS 686
Query: 225 VPPATLL---VPYPVIVPLPVPVPIPIPIPMPQSS 256
PP + VP PV+ P +P +P + P S
Sbjct: 687 QPPPGFMPPPVPPPVVPPPTIPPVVPTSLVQPSLS 721
Score = 36.6 bits (83), Expect = 0.058
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 211 PVPPQPFSSPLSPLVPPATLLVP-YPVIVPLPVPVPIPIPIPMPQSSESKFSSSFPKP 267
P P P++P VP +L+ P +PV +PVP P PIP P + F+ S P P
Sbjct: 635 PPPVAMLQIPVAPAVPTVSLVPPAFPV--SMPVPPPGFSPIPPPPFLRASFNPSQPPP 690
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 47.4 bits (111), Expect = 3e-05
Identities = 55/208 (26%), Positives = 75/208 (36%), Gaps = 42/208 (20%)
Query: 162 PEAQPQLLDLRIPSQPQEPTLPFEAVLQNLFPSQGTLG--PPPCQPP-------PGYAPV 212
P+ P +P P P LP + N P L PPP PP P P
Sbjct: 1419 PDGPPLAPAAAVPGPPPLPGLP--SANSNGTPEPPLLEEKPPPTPPPAPTPQPQPPPPPP 1476
Query: 213 PPQPFSSPLSPLVPPATLLVPYPVIVPLPVPVPIPIPIPMPQSSESKFSSSFPKPPSSFG 272
PPQP PLV P P P PLP P P +P P P P PP++
Sbjct: 1477 PPQPALPSPPPLVAPTPSSPPPP---PLPPPPPPAMPSPPP-----------PPPPAAAP 1522
Query: 273 L-----HPFKGTQTPLEKDELKPFDILQPKEYFQLSRHTVIKMGS--------ENEALDL 319
L P + E + +P + + +E + T + G E + +
Sbjct: 1523 LAAPPEEPAAPSPEDPELPDTRPLHLAKKQETAAVCGETDEEAGESGGEGIFRERDEFVI 1582
Query: 320 SMKSVPWLK----AGEVSPPIFQEDAAL 343
+ +P LK G PPI++ AL
Sbjct: 1583 RAEDIPSLKLALQTGREPPPIWRVQKAL 1610
Score = 34.3 bits (77), Expect = 0.29
Identities = 42/160 (26%), Positives = 54/160 (33%), Gaps = 25/160 (15%)
Query: 136 SPLVLPQEAPCSSSTIHNNLFQ-GAED-----PEAQPQLLDLRIPSQPQEPTLPFEAVLQ 189
SP P A + T H L + G D P PQLL + P + +
Sbjct: 763 SPPPPPPTAQSTQPTPHGLLLEAGGPDLPLVLPPPPPQLLPSVLSHAPSPSPSASKVGVH 822
Query: 190 NLFPSQGTLGPPPCQPPP-----------------GYAPVPPQPFSSPLSPLVPPATLLV 232
L P+ P P PPP G P P P P L PP +
Sbjct: 823 LLEPATRDGAPQPPPPPPPPPPPMPLQLEAHLRSHGLEPAAPSPRLRPEESLDPPGAMQE 882
Query: 233 PYPVIVPLPVPVPIPIPIPMPQSSESKFSSSFPKPPSSFG 272
+ PLP P P + P +SE K + + PS G
Sbjct: 883 LLGALEPLP-PAPGDTGVG-PPNSEGKDPAGAYRSPSPQG 920
Score = 30.8 bits (68), Expect = 3.2
Identities = 32/95 (33%), Positives = 38/95 (40%), Gaps = 9/95 (9%)
Query: 198 LGPPPCQPPPG---YAPVPPQPFSSPLSPLVPPATLLVPYPVIVPLPVPVPIPIPIPMPQ 254
L PPP Q P +AP P S L+ PAT P P P P P P PMP
Sbjct: 794 LPPPPPQLLPSVLSHAPSPSPSASKVGVHLLEPATRDG-----APQPPPPPPPPPPPMPL 848
Query: 255 SSESKFSSSFPKPPS-SFGLHPFKGTQTPLEKDEL 288
E+ S +P + S L P + P EL
Sbjct: 849 QLEAHLRSHGLEPAAPSPRLRPEESLDPPGAMQEL 883
Score = 29.3 bits (64), Expect = 9.3
Identities = 19/54 (35%), Positives = 21/54 (38%), Gaps = 3/54 (5%)
Query: 174 PSQPQEPTLPFEAVLQNLFPSQGTLGPPPCQPPPGYAPVPPQPFSSPLSPLVPP 227
P++P E A L S PP PPP P PP P S P L P
Sbjct: 1012 PNKPPELPSTVNAEPLGLIQSGPHQAAPPPPPPP---PPPPAPASEPKGGLTSP 1062
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 46.6 bits (109), Expect = 6e-05
Identities = 31/98 (31%), Positives = 42/98 (42%), Gaps = 4/98 (4%)
Query: 174 PSQPQEPTLPFEAVLQNLFPSQGTLGPPPCQPPPGYAPVPPQPFSSPLSPLVPPATLLVP 233
PS PQ P + + P P PPP AP+PPQ PL + P +
Sbjct: 735 PSLPQFSAPPPPLKIHQVQHITQVAPPTPPPPPPIPAPLPPQAPPKPLVTIPAPTSTKTV 794
Query: 234 YPVIVPLPVPVPIPIPIPMPQSSESKFSSSF--PKPPS 269
PV+ P P P P+P P + F +S+ P PP+
Sbjct: 795 APVVTQAAPPTPTP-PVP-PAKKQPAFPASYIPPSPPT 830
Score = 44.3 bits (103), Expect = 3e-04
Identities = 33/110 (30%), Positives = 46/110 (41%), Gaps = 11/110 (10%)
Query: 177 PQEPTLPFEAVL-QNLFPSQGTLGPPPCQPPP-----GYAPVPPQPFSSPLSPLVPPATL 230
P P + ++V Q L P G + PPP PPP A + P P + L P
Sbjct: 687 PTPPVMQSQSVKPQILVPPNGVVPPPPPPPPPPTPGSAMAQLKPAPCAPSLPQFSAPPPP 746
Query: 231 LVPYPV-----IVPLPVPVPIPIPIPMPQSSESKFSSSFPKPPSSFGLHP 275
L + V + P P P PIP P+P + K + P P S+ + P
Sbjct: 747 LKIHQVQHITQVAPPTPPPPPPIPAPLPPQAPPKPLVTIPAPTSTKTVAP 796
Score = 40.8 bits (94), Expect = 0.003
Identities = 34/116 (29%), Positives = 45/116 (38%), Gaps = 6/116 (5%)
Query: 174 PSQPQEPTLPFEAVLQNLFPSQGTLGPPPCQPPPGYAPVPPQPFSSPLSPLVPPATLLVP 233
P+ P + P + V N+ P PP + P + P P SP P PP + LV
Sbjct: 873 PTPPAMESQPLKPVPANVAPQS----PPAVKAKPKWQP-SSIPVPSPDFPPPPPESSLV- 926
Query: 234 YPVIVPLPVPVPIPIPIPMPQSSESKFSSSFPKPPSSFGLHPFKGTQTPLEKDELK 289
+P P PVP P P P P + K S K + K TP +K
Sbjct: 927 FPPPPPSPVPAPPPPPPPTASPTPDKSGSPGKKTSKTSSPGGKKPPPTPQRNSSIK 982
Score = 38.1 bits (87), Expect = 0.020
Identities = 30/94 (31%), Positives = 40/94 (42%), Gaps = 11/94 (11%)
Query: 177 PQEPTLPFEAVLQNLFPSQGTLGPPPCQPPPGYAPVPPQPFSSPLSPLVPPATLLVPYPV 236
P P P +V++ + PPP PP P +P + ++P PPA P
Sbjct: 851 PPSPLSPVPSVVKQI---ASQFPPPPT--PPAMESQPLKPVPANVAPQSPPAVKAKPKWQ 905
Query: 237 IVPLPVPVPIPIPIPMPQSSESKFSSSFPKPPSS 270
+PVP P P P P+S S FP PP S
Sbjct: 906 PSSIPVPSPD-FPPPPPES-----SLVFPPPPPS 933
Score = 37.4 bits (85), Expect = 0.034
Identities = 89/376 (23%), Positives = 119/376 (31%), Gaps = 83/376 (22%)
Query: 49 ALVTVPAPSILNPPAESQSGMALKVAATVLQPLCLGESPVVMPIHMQVEGSSAPELNPNG 108
AL P P ++ +SQS V +L P P P GS+ +L P
Sbjct: 682 ALFKPPTPPVM----QSQS-----VKPQILVPPNGVVPPPPPPPPPPTPGSAMAQLKPAP 732
Query: 109 NATYVMTTQGPVQLPVVLEQHVFQHLNS------------PLVLPQEAP----------C 146
A + P P L+ H QH+ P LP +AP
Sbjct: 733 CAPSLPQFSAP---PPPLKIHQVQHITQVAPPTPPPPPPIPAPLPPQAPPKPLVTIPAPT 789
Query: 147 SSSTIHNNLFQGAEDP--------EAQPQLLDLRIPSQPQEPTLPFEAVLQNLFPSQGTL 198
S+ T+ + Q A + QP IP P P +P V P Q +
Sbjct: 790 STKTVAPVVTQAAPPTPTPPVPPAKKQPAFPASYIPPSPPTPPVP---VPPPTLPKQQSF 846
Query: 199 ----GPPPCQPPPGYA-------PVPPQPFSSPLSPLVPPATLLVPY--PVIVPLPVPVP 245
P P P P P PP P + PL P + P P + P P
Sbjct: 847 CAKPPPSPLSPVPSVVKQIASQFPPPPTPPAMESQPLKPVPANVAPQSPPAVKAKPKWQP 906
Query: 246 IPIPIPMPQSSESKFSSSFPKPPSSFGLHPFKGTQTPLEKDELKPFDILQPKEYFQLSRH 305
IP+P P FP PP L +P+ P P
Sbjct: 907 SSIPVPSPD---------FPPPPPESSLVFPPPPPSPVPAPPPPPPPTASP--------- 948
Query: 306 TVIKMGSENEALDLSMKSVPWLKAGEVSPPIFQEDAALDLSVAAH--RKSEPPPETLYDS 363
T K GS + S S P G+ PP Q ++++ S A P ++L
Sbjct: 949 TPDKSGSPGK--KTSKTSSP---GGKKPPPTPQRNSSIKSSSGAEHPEPKRPSVDSLVSK 1003
Query: 364 GASVDSSGHTVMEKLP 379
SG E LP
Sbjct: 1004 FTPPAESGSPSKETLP 1019
Score = 33.5 bits (75), Expect = 0.49
Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 17/75 (22%)
Query: 215 QPFSSPLSPLVPPATLLVPY------PVIVPLPVPVPIPIPIPMPQSSESKFSSSFPKPP 268
+P++S + PL P ++ PY P + P P P P P P P P P PP
Sbjct: 600 RPYTSLVPPLSPQPKIVTPYTASQPSPPLPPPPPPPPPPPPPPPP-----------PPPP 648
Query: 269 SSFGLHPFKGTQTPL 283
P G+ P+
Sbjct: 649 LPSQSAPSAGSAAPM 663
Score = 33.5 bits (75), Expect = 0.49
Identities = 38/154 (24%), Positives = 48/154 (31%), Gaps = 59/154 (38%)
Query: 165 QPQLLDLRIPSQPQEPTLPFEAVLQNLFPSQGTLGPPPCQPPPGYAPVPPQP-------- 216
QP+++ SQP P P PPP PPP P PP P
Sbjct: 612 QPKIVTPYTASQPSPPLPP---------------PPPPPPPPPPPPPPPPPPLPSQSAPS 656
Query: 217 ---------------------------FSSPLSPL-----VPPATLLVPYPVIVPLPVPV 244
F P P+ V P L+ P V+ P P P
Sbjct: 657 AGSAAPMFVKYSTITRLQNASQHSGALFKPPTPPVMQSQSVKPQILVPPNGVVPPPPPPP 716
Query: 245 PIPIP-IPMPQSSESKFSSSFPK---PPSSFGLH 274
P P P M Q + + S P+ PP +H
Sbjct: 717 PPPTPGSAMAQLKPAPCAPSLPQFSAPPPPLKIH 750
Score = 31.2 bits (69), Expect = 2.5
Identities = 22/66 (33%), Positives = 24/66 (36%), Gaps = 11/66 (16%)
Query: 201 PPCQPPPGYA-PVPPQPFSSPLSPLVPPATLLVPYPVIVPLPVPVPIPIPIPMPQSSESK 259
PP P P P S PL P PP P P P P P P P+P S
Sbjct: 607 PPLSPQPKIVTPYTASQPSPPLPPPPPPP----------PPPPPPPPPPPPPLPSQSAPS 656
Query: 260 FSSSFP 265
S+ P
Sbjct: 657 AGSAAP 662
>gi|115387123 protocadherin 15 isoform CD1-4 precursor [Homo sapiens]
Length = 1955
Score = 46.2 bits (108), Expect = 7e-05
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 10/92 (10%)
Query: 182 LPFEA---VLQNLFPSQGTLGPPPC--QPPPGYAPVPPQPFSSPLSPLVPPATLLVPYPV 236
LP E + +N F + P C PPP +P P P +PL+P PP + P+ +
Sbjct: 1722 LPIETERNIFEN-FAHPPNISPSACPLPPPPPISPPSPPPAPAPLAP--PPD--ISPFSL 1776
Query: 237 IVPLPVPVPIPIPIPMPQSSESKFSSSFPKPP 268
P P P IP+P+P P S+S P P
Sbjct: 1777 FCPPPSPPSIPLPLPPPTFFPLSVSTSGPPTP 1808
Score = 46.2 bits (108), Expect = 7e-05
Identities = 34/98 (34%), Positives = 41/98 (41%), Gaps = 19/98 (19%)
Query: 190 NLFPSQGTLGPPPC----QPPPGYAPVPPQPFSSPLSPLVPPATLLVPYPVIVPLPVPVP 245
N+ PS L PPP PPP AP+ P P SP S PP P P +PLP+P
Sbjct: 1739 NISPSACPLPPPPPISPPSPPPAPAPLAPPPDISPFSLFCPP-----PSPPSIPLPLPP- 1792
Query: 246 IPIPIPMPQSSES--------KFSSSFPKPPSSFGLHP 275
P P+ S+ F + P PP S P
Sbjct: 1793 -PTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPP 1829
Score = 37.0 bits (84), Expect = 0.045
Identities = 33/116 (28%), Positives = 46/116 (39%), Gaps = 14/116 (12%)
Query: 122 LPVVLEQHVFQHLNSP-------LVLPQEAPCSSSTIHNNLFQGAEDPEAQPQLLDLRIP 174
LP+ E+++F++ P LP P S + A P+ P L P
Sbjct: 1722 LPIETERNIFENFAHPPNISPSACPLPPPPPISPPSPPPAPAPLAPPPDISP--FSLFCP 1779
Query: 175 SQPQEPTLPFEAVLQNLFPSQGTLGPPPCQP--PPGYAPVPPQPFSSPLSPLVPPA 228
P P++P FP + PP P PP P+PP P S P P PP+
Sbjct: 1780 P-PSPPSIPLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPP--PPS 1832
Score = 32.0 bits (71), Expect = 1.4
Identities = 26/85 (30%), Positives = 32/85 (37%), Gaps = 18/85 (21%)
Query: 214 PQPFSSPLSPLVPPATLLVPYPVIVPLPV---------------PVPIPIPIPMPQSSES 258
P S PL PP + P P P P+ P P IP+P+P +
Sbjct: 1737 PPNISPSACPLPPPPPISPPSPPPAPAPLAPPPDISPFSLFCPPPSPPSIPLPLPPPTFF 1796
Query: 259 KFSSSFPKPPSSFGLHPFKGTQTPL 283
S S PP+ L PF TPL
Sbjct: 1797 PLSVSTSGPPTPPLLPPF---PTPL 1818
>gi|218505798 protocadherin 15 isoform CD1-10 precursor [Homo sapiens]
Length = 1932
Score = 46.2 bits (108), Expect = 7e-05
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 10/92 (10%)
Query: 182 LPFEA---VLQNLFPSQGTLGPPPC--QPPPGYAPVPPQPFSSPLSPLVPPATLLVPYPV 236
LP E + +N F + P C PPP +P P P +PL+P PP + P+ +
Sbjct: 1699 LPIETERNIFEN-FAHPPNISPSACPLPPPPPISPPSPPPAPAPLAP--PPD--ISPFSL 1753
Query: 237 IVPLPVPVPIPIPIPMPQSSESKFSSSFPKPP 268
P P P IP+P+P P S+S P P
Sbjct: 1754 FCPPPSPPSIPLPLPPPTFFPLSVSTSGPPTP 1785
Score = 46.2 bits (108), Expect = 7e-05
Identities = 34/98 (34%), Positives = 41/98 (41%), Gaps = 19/98 (19%)
Query: 190 NLFPSQGTLGPPPC----QPPPGYAPVPPQPFSSPLSPLVPPATLLVPYPVIVPLPVPVP 245
N+ PS L PPP PPP AP+ P P SP S PP P P +PLP+P
Sbjct: 1716 NISPSACPLPPPPPISPPSPPPAPAPLAPPPDISPFSLFCPP-----PSPPSIPLPLPP- 1769
Query: 246 IPIPIPMPQSSES--------KFSSSFPKPPSSFGLHP 275
P P+ S+ F + P PP S P
Sbjct: 1770 -PTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPP 1806
Score = 37.0 bits (84), Expect = 0.045
Identities = 33/116 (28%), Positives = 46/116 (39%), Gaps = 14/116 (12%)
Query: 122 LPVVLEQHVFQHLNSP-------LVLPQEAPCSSSTIHNNLFQGAEDPEAQPQLLDLRIP 174
LP+ E+++F++ P LP P S + A P+ P L P
Sbjct: 1699 LPIETERNIFENFAHPPNISPSACPLPPPPPISPPSPPPAPAPLAPPPDISP--FSLFCP 1756
Query: 175 SQPQEPTLPFEAVLQNLFPSQGTLGPPPCQP--PPGYAPVPPQPFSSPLSPLVPPA 228
P P++P FP + PP P PP P+PP P S P P PP+
Sbjct: 1757 P-PSPPSIPLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPP--PPS 1809
Score = 32.0 bits (71), Expect = 1.4
Identities = 26/85 (30%), Positives = 32/85 (37%), Gaps = 18/85 (21%)
Query: 214 PQPFSSPLSPLVPPATLLVPYPVIVPLPV---------------PVPIPIPIPMPQSSES 258
P S PL PP + P P P P+ P P IP+P+P +
Sbjct: 1714 PPNISPSACPLPPPPPISPPSPPPAPAPLAPPPDISPFSLFCPPPSPPSIPLPLPPPTFF 1773
Query: 259 KFSSSFPKPPSSFGLHPFKGTQTPL 283
S S PP+ L PF TPL
Sbjct: 1774 PLSVSTSGPPTPPLLPPF---PTPL 1795
>gi|218505785 protocadherin 15 isoform CD1-9 precursor [Homo sapiens]
Length = 1935
Score = 46.2 bits (108), Expect = 7e-05
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 10/92 (10%)
Query: 182 LPFEA---VLQNLFPSQGTLGPPPC--QPPPGYAPVPPQPFSSPLSPLVPPATLLVPYPV 236
LP E + +N F + P C PPP +P P P +PL+P PP + P+ +
Sbjct: 1702 LPIETERNIFEN-FAHPPNISPSACPLPPPPPISPPSPPPAPAPLAP--PPD--ISPFSL 1756
Query: 237 IVPLPVPVPIPIPIPMPQSSESKFSSSFPKPP 268
P P P IP+P+P P S+S P P
Sbjct: 1757 FCPPPSPPSIPLPLPPPTFFPLSVSTSGPPTP 1788
Score = 46.2 bits (108), Expect = 7e-05
Identities = 34/98 (34%), Positives = 41/98 (41%), Gaps = 19/98 (19%)
Query: 190 NLFPSQGTLGPPPC----QPPPGYAPVPPQPFSSPLSPLVPPATLLVPYPVIVPLPVPVP 245
N+ PS L PPP PPP AP+ P P SP S PP P P +PLP+P
Sbjct: 1719 NISPSACPLPPPPPISPPSPPPAPAPLAPPPDISPFSLFCPP-----PSPPSIPLPLPP- 1772
Query: 246 IPIPIPMPQSSES--------KFSSSFPKPPSSFGLHP 275
P P+ S+ F + P PP S P
Sbjct: 1773 -PTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPP 1809
Score = 37.0 bits (84), Expect = 0.045
Identities = 33/116 (28%), Positives = 46/116 (39%), Gaps = 14/116 (12%)
Query: 122 LPVVLEQHVFQHLNSP-------LVLPQEAPCSSSTIHNNLFQGAEDPEAQPQLLDLRIP 174
LP+ E+++F++ P LP P S + A P+ P L P
Sbjct: 1702 LPIETERNIFENFAHPPNISPSACPLPPPPPISPPSPPPAPAPLAPPPDISP--FSLFCP 1759
Query: 175 SQPQEPTLPFEAVLQNLFPSQGTLGPPPCQP--PPGYAPVPPQPFSSPLSPLVPPA 228
P P++P FP + PP P PP P+PP P S P P PP+
Sbjct: 1760 P-PSPPSIPLPLPPPTFFPLSVSTSGPPTPPLLPPFPTPLPPPPPSIPCPP--PPS 1812
Score = 32.0 bits (71), Expect = 1.4
Identities = 26/85 (30%), Positives = 32/85 (37%), Gaps = 18/85 (21%)
Query: 214 PQPFSSPLSPLVPPATLLVPYPVIVPLPV---------------PVPIPIPIPMPQSSES 258
P S PL PP + P P P P+ P P IP+P+P +
Sbjct: 1717 PPNISPSACPLPPPPPISPPSPPPAPAPLAPPPDISPFSLFCPPPSPPSIPLPLPPPTFF 1776
Query: 259 KFSSSFPKPPSSFGLHPFKGTQTPL 283
S S PP+ L PF TPL
Sbjct: 1777 PLSVSTSGPPTPPLLPPF---PTPL 1798
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.130 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,858,533
Number of Sequences: 37866
Number of extensions: 1583994
Number of successful extensions: 15342
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 281
Number of HSP's successfully gapped in prelim test: 665
Number of HSP's that attempted gapping in prelim test: 7603
Number of HSP's gapped (non-prelim): 3960
length of query: 530
length of database: 18,247,518
effective HSP length: 107
effective length of query: 423
effective length of database: 14,195,856
effective search space: 6004847088
effective search space used: 6004847088
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.