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Search of human proteins with 193788629
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|193788629 testis expressed 264 [Homo sapiens]
(313 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|193788629 testis expressed 264 [Homo sapiens] 639 0.0
gi|7706708 testis expressed 264 [Homo sapiens] 639 0.0
gi|31652242 transcription factor 20 isoform 2 [Homo sapiens] 33 0.33
gi|31652244 transcription factor 20 isoform 1 [Homo sapiens] 33 0.33
gi|157674363 protein phosphatase 1, regulatory subunit 15A [Homo... 32 0.56
gi|30795231 brain abundant, membrane attached signal protein 1 [... 32 0.95
gi|169166609 PREDICTED: similar to ribonucleic acid binding prot... 32 0.95
gi|113415994 PREDICTED: similar to ribonucleic acid binding prot... 32 0.95
gi|195947361 histidine acid phosphatase domain containing 2A iso... 32 0.95
gi|195947359 histidine acid phosphatase domain containing 2A iso... 32 0.95
gi|66932992 histidine acid phosphatase domain containing 2A isof... 32 0.95
gi|6857826 RNA-binding protein S1, serine-rich domain [Homo sapi... 32 0.95
gi|18379334 RNA-binding protein S1, serine-rich domain [Homo sap... 32 0.95
gi|113415504 PREDICTED: similar to ribonucleic acid binding prot... 31 1.2
gi|169166499 PREDICTED: similar to ribonucleic acid binding prot... 31 1.2
gi|113415498 PREDICTED: similar to ribonucleic acid binding prot... 31 1.2
gi|88973230 PREDICTED: similar to ribonucleic acid binding prote... 31 1.2
gi|208431815 protein tyrosine phosphatase, receptor type, K isof... 31 1.6
gi|18860902 protein tyrosine phosphatase, receptor type, K isofo... 31 1.6
gi|4505379 nuclear factor erythroid 2-like 1 [Homo sapiens] 31 1.6
gi|187937179 apoptosis-associated tyrosine kinase [Homo sapiens] 31 1.6
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 31 1.6
gi|119220598 apolipoprotein B48 receptor [Homo sapiens] 31 1.6
gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribo... 30 2.1
gi|224586880 Ras protein-specific guanine nucleotide-releasing f... 30 2.8
gi|24797099 Ras protein-specific guanine nucleotide-releasing fa... 30 2.8
gi|156104903 myomesin 2 [Homo sapiens] 30 2.8
gi|122937243 dual specificity phosphatase 27 [Homo sapiens] 29 4.7
gi|24797101 Ras protein-specific guanine nucleotide-releasing fa... 29 4.7
gi|17978466 cyclin T1 [Homo sapiens] 29 4.7
>gi|193788629 testis expressed 264 [Homo sapiens]
Length = 313
Score = 639 bits (1648), Expect = 0.0
Identities = 313/313 (100%), Positives = 313/313 (100%)
Query: 1 MSDLLLLGLIGGLTLLLLLTLLAFAGYSGLLAGVEVSAGSPPIRNVTVAYKFHMGLYGET 60
MSDLLLLGLIGGLTLLLLLTLLAFAGYSGLLAGVEVSAGSPPIRNVTVAYKFHMGLYGET
Sbjct: 1 MSDLLLLGLIGGLTLLLLLTLLAFAGYSGLLAGVEVSAGSPPIRNVTVAYKFHMGLYGET 60
Query: 61 GRLFTESCSISPKLRSIAVYYDNPHMVPPDKCRCAVGSILSEGEESPSPELIDLYQKFGF 120
GRLFTESCSISPKLRSIAVYYDNPHMVPPDKCRCAVGSILSEGEESPSPELIDLYQKFGF
Sbjct: 61 GRLFTESCSISPKLRSIAVYYDNPHMVPPDKCRCAVGSILSEGEESPSPELIDLYQKFGF 120
Query: 121 KVFSFPAPSHVVTATFPYTTILSIWLATRRVHPALDTYIKERKLCAYPRLEIYQEDQIHF 180
KVFSFPAPSHVVTATFPYTTILSIWLATRRVHPALDTYIKERKLCAYPRLEIYQEDQIHF
Sbjct: 121 KVFSFPAPSHVVTATFPYTTILSIWLATRRVHPALDTYIKERKLCAYPRLEIYQEDQIHF 180
Query: 181 MCPLARQGDFYVPEMKETEWKWRGLVEAIDTQVDGTGADTMSDTSSVSLEVSPGSRETSA 240
MCPLARQGDFYVPEMKETEWKWRGLVEAIDTQVDGTGADTMSDTSSVSLEVSPGSRETSA
Sbjct: 181 MCPLARQGDFYVPEMKETEWKWRGLVEAIDTQVDGTGADTMSDTSSVSLEVSPGSRETSA 240
Query: 241 ATLSPGASSRGWDDGDTRSEHSYSESGASGSSFEELDLEGEGPLGESRLDPGTEPLGTTK 300
ATLSPGASSRGWDDGDTRSEHSYSESGASGSSFEELDLEGEGPLGESRLDPGTEPLGTTK
Sbjct: 241 ATLSPGASSRGWDDGDTRSEHSYSESGASGSSFEELDLEGEGPLGESRLDPGTEPLGTTK 300
Query: 301 WLWEPTAPEKGKE 313
WLWEPTAPEKGKE
Sbjct: 301 WLWEPTAPEKGKE 313
>gi|7706708 testis expressed 264 [Homo sapiens]
Length = 313
Score = 639 bits (1648), Expect = 0.0
Identities = 313/313 (100%), Positives = 313/313 (100%)
Query: 1 MSDLLLLGLIGGLTLLLLLTLLAFAGYSGLLAGVEVSAGSPPIRNVTVAYKFHMGLYGET 60
MSDLLLLGLIGGLTLLLLLTLLAFAGYSGLLAGVEVSAGSPPIRNVTVAYKFHMGLYGET
Sbjct: 1 MSDLLLLGLIGGLTLLLLLTLLAFAGYSGLLAGVEVSAGSPPIRNVTVAYKFHMGLYGET 60
Query: 61 GRLFTESCSISPKLRSIAVYYDNPHMVPPDKCRCAVGSILSEGEESPSPELIDLYQKFGF 120
GRLFTESCSISPKLRSIAVYYDNPHMVPPDKCRCAVGSILSEGEESPSPELIDLYQKFGF
Sbjct: 61 GRLFTESCSISPKLRSIAVYYDNPHMVPPDKCRCAVGSILSEGEESPSPELIDLYQKFGF 120
Query: 121 KVFSFPAPSHVVTATFPYTTILSIWLATRRVHPALDTYIKERKLCAYPRLEIYQEDQIHF 180
KVFSFPAPSHVVTATFPYTTILSIWLATRRVHPALDTYIKERKLCAYPRLEIYQEDQIHF
Sbjct: 121 KVFSFPAPSHVVTATFPYTTILSIWLATRRVHPALDTYIKERKLCAYPRLEIYQEDQIHF 180
Query: 181 MCPLARQGDFYVPEMKETEWKWRGLVEAIDTQVDGTGADTMSDTSSVSLEVSPGSRETSA 240
MCPLARQGDFYVPEMKETEWKWRGLVEAIDTQVDGTGADTMSDTSSVSLEVSPGSRETSA
Sbjct: 181 MCPLARQGDFYVPEMKETEWKWRGLVEAIDTQVDGTGADTMSDTSSVSLEVSPGSRETSA 240
Query: 241 ATLSPGASSRGWDDGDTRSEHSYSESGASGSSFEELDLEGEGPLGESRLDPGTEPLGTTK 300
ATLSPGASSRGWDDGDTRSEHSYSESGASGSSFEELDLEGEGPLGESRLDPGTEPLGTTK
Sbjct: 241 ATLSPGASSRGWDDGDTRSEHSYSESGASGSSFEELDLEGEGPLGESRLDPGTEPLGTTK 300
Query: 301 WLWEPTAPEKGKE 313
WLWEPTAPEKGKE
Sbjct: 301 WLWEPTAPEKGKE 313
>gi|31652242 transcription factor 20 isoform 2 [Homo sapiens]
Length = 1938
Score = 33.1 bits (74), Expect = 0.33
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 12/67 (17%)
Query: 234 GSRETSAATLSP-----GASSRGWDDGDTRSEHSYSESGASGSSFEELDLEGEGPLGESR 288
G++ETS A+L G S+G +GD S H+ +G SG S GP SR
Sbjct: 643 GAKETSHASLPQPEPPGGGGSKGNKNGDNNSNHNGEGNGQSGHS-------AAGPGFTSR 695
Query: 289 LDPGTEP 295
+P P
Sbjct: 696 TEPSKSP 702
>gi|31652244 transcription factor 20 isoform 1 [Homo sapiens]
Length = 1960
Score = 33.1 bits (74), Expect = 0.33
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 12/67 (17%)
Query: 234 GSRETSAATLSP-----GASSRGWDDGDTRSEHSYSESGASGSSFEELDLEGEGPLGESR 288
G++ETS A+L G S+G +GD S H+ +G SG S GP SR
Sbjct: 643 GAKETSHASLPQPEPPGGGGSKGNKNGDNNSNHNGEGNGQSGHS-------AAGPGFTSR 695
Query: 289 LDPGTEP 295
+P P
Sbjct: 696 TEPSKSP 702
>gi|157674363 protein phosphatase 1, regulatory subunit 15A [Homo
sapiens]
Length = 674
Score = 32.3 bits (72), Expect = 0.56
Identities = 26/107 (24%), Positives = 42/107 (39%), Gaps = 17/107 (15%)
Query: 211 TQVDGTGADTMSDTSSVSLEVSPGSRETSAATLSPGASSRGW-----DDGDTRSEHSYSE 265
T V G + T E S G+R+TS + S G+ R W + + + E ++ E
Sbjct: 219 TWVSCPGEEENQATEDKRTERSKGARKTSVSPRSSGSDPRSWEYRSGEASEEKEEKAHKE 278
Query: 266 SGASGSSFEELDLEGEGPLGESRLDPGTEPLGTTKWLWEPTAPEKGK 312
+G +GE G P P W +P+ E+G+
Sbjct: 279 TG-----------KGEAAPGPQSSAPAQRP-QLKSWWCQPSDEEEGE 313
>gi|30795231 brain abundant, membrane attached signal protein 1
[Homo sapiens]
Length = 227
Score = 31.6 bits (70), Expect = 0.95
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 208 AIDTQVDGTGADTMSDTSSVSLEVSPGSRETSAATLSPGASSRGWDDGDTRSEHSYSESG 267
A +T+ DG A SD+ S E +P S+ET AAT +P ++ + + E E+
Sbjct: 159 AQETKSDGAPA---SDSKPGSSEAAPSSKETPAATEAPSSTPKAQGPAASAEEPKPVEAP 215
Query: 268 ASGS 271
A+ S
Sbjct: 216 AANS 219
>gi|169166609 PREDICTED: similar to ribonucleic acid binding protein
S1 isoform 6 [Homo sapiens]
Length = 305
Score = 31.6 bits (70), Expect = 0.95
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 196 KETEWKWRGLVEAIDTQVDGTGAD-TMSDTSSVSLEVSPGSRETSAATLSPGASSRGWDD 254
KE+ K RG + + +G+ T S +SS S S S +S+ + S ASSR
Sbjct: 50 KESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSS 109
Query: 255 GDTRSEHSYSESGASGSS 272
+RS S S SG+ S
Sbjct: 110 STSRSSSSSSSSGSPSPS 127
>gi|113415994 PREDICTED: similar to ribonucleic acid binding protein
S1 isoform 2 [Homo sapiens]
Length = 305
Score = 31.6 bits (70), Expect = 0.95
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 196 KETEWKWRGLVEAIDTQVDGTGAD-TMSDTSSVSLEVSPGSRETSAATLSPGASSRGWDD 254
KE+ K RG + + +G+ T S +SS S S S +S+ + S ASSR
Sbjct: 50 KESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSS 109
Query: 255 GDTRSEHSYSESGASGSS 272
+RS S S SG+ S
Sbjct: 110 STSRSSSSSSSSGSPSPS 127
>gi|195947361 histidine acid phosphatase domain containing 2A isoform
2 [Homo sapiens]
Length = 1408
Score = 31.6 bits (70), Expect = 0.95
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 11/87 (12%)
Query: 233 PGSRETSAATLSP----GASSRGWDDGDTRSEHSYSE-------SGASGSSFEELDLEGE 281
P S +SA SP G S G+ D + + H E GS +EL +EGE
Sbjct: 1146 PSSTVSSAGPSSPTTVDGNSQFGFSDQPSLNSHVAEEHQGLGLLQETPGSGAQELSIEGE 1205
Query: 282 GPLGESRLDPGTEPLGTTKWLWEPTAP 308
L E P P+ T++ E + P
Sbjct: 1206 QELFEPNQSPQVPPMETSQPYEEVSQP 1232
>gi|195947359 histidine acid phosphatase domain containing 2A isoform
5 [Homo sapiens]
Length = 1433
Score = 31.6 bits (70), Expect = 0.95
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 11/87 (12%)
Query: 233 PGSRETSAATLSP----GASSRGWDDGDTRSEHSYSE-------SGASGSSFEELDLEGE 281
P S +SA SP G S G+ D + + H E GS +EL +EGE
Sbjct: 1171 PSSTVSSAGPSSPTTVDGNSQFGFSDQPSLNSHVAEEHQGLGLLQETPGSGAQELSIEGE 1230
Query: 282 GPLGESRLDPGTEPLGTTKWLWEPTAP 308
L E P P+ T++ E + P
Sbjct: 1231 QELFEPNQSPQVPPMETSQPYEEVSQP 1257
>gi|66932992 histidine acid phosphatase domain containing 2A isoform 2
[Homo sapiens]
Length = 1408
Score = 31.6 bits (70), Expect = 0.95
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 11/87 (12%)
Query: 233 PGSRETSAATLSP----GASSRGWDDGDTRSEHSYSE-------SGASGSSFEELDLEGE 281
P S +SA SP G S G+ D + + H E GS +EL +EGE
Sbjct: 1146 PSSTVSSAGPSSPTTVDGNSQFGFSDQPSLNSHVAEEHQGLGLLQETPGSGAQELSIEGE 1205
Query: 282 GPLGESRLDPGTEPLGTTKWLWEPTAP 308
L E P P+ T++ E + P
Sbjct: 1206 QELFEPNQSPQVPPMETSQPYEEVSQP 1232
>gi|6857826 RNA-binding protein S1, serine-rich domain [Homo
sapiens]
Length = 305
Score = 31.6 bits (70), Expect = 0.95
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 196 KETEWKWRGLVEAIDTQVDGTGAD-TMSDTSSVSLEVSPGSRETSAATLSPGASSRGWDD 254
KE+ K RG + + +G+ T S +SS S S S +S+ + S ASSR
Sbjct: 50 KESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSS 109
Query: 255 GDTRSEHSYSESGASGSS 272
+RS S S SG+ S
Sbjct: 110 STSRSSSSSSSSGSPSPS 127
>gi|18379334 RNA-binding protein S1, serine-rich domain [Homo
sapiens]
Length = 305
Score = 31.6 bits (70), Expect = 0.95
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 196 KETEWKWRGLVEAIDTQVDGTGAD-TMSDTSSVSLEVSPGSRETSAATLSPGASSRGWDD 254
KE+ K RG + + +G+ T S +SS S S S +S+ + S ASSR
Sbjct: 50 KESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSS 109
Query: 255 GDTRSEHSYSESGASGSS 272
+RS S S SG+ S
Sbjct: 110 STSRSSSSSSSSGSPSPS 127
>gi|113415504 PREDICTED: similar to ribonucleic acid binding protein
S1 [Homo sapiens]
Length = 305
Score = 31.2 bits (69), Expect = 1.2
Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Query: 196 KETEWKWRGLVEAIDTQVDGTGAD-TMSDTSSVSLEVSPGSRETSAATLSPGASSRGWDD 254
KE+ K RG + +G+ T S +SS S S S +S+ + S ASSR
Sbjct: 50 KESSEKDRGRDKTRKRHSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSS 109
Query: 255 GDTRSEHSYSESGASGSS 272
+RS S S SG+ S
Sbjct: 110 STSRSSSSSSSSGSPSPS 127
>gi|169166499 PREDICTED: similar to ribonucleic acid binding protein
S1 [Homo sapiens]
Length = 305
Score = 31.2 bits (69), Expect = 1.2
Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Query: 196 KETEWKWRGLVEAIDTQVDGTGAD-TMSDTSSVSLEVSPGSRETSAATLSPGASSRGWDD 254
KE+ K RG + +G+ T S +SS S S S +S+ + S ASSR
Sbjct: 50 KESSEKDRGRDKTRKRHSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSS 109
Query: 255 GDTRSEHSYSESGASGSS 272
+RS S S SG+ S
Sbjct: 110 STSRSSSSSSSSGSPSPS 127
>gi|113415498 PREDICTED: similar to ribonucleic acid binding protein
S1 [Homo sapiens]
Length = 305
Score = 31.2 bits (69), Expect = 1.2
Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Query: 196 KETEWKWRGLVEAIDTQVDGTGAD-TMSDTSSVSLEVSPGSRETSAATLSPGASSRGWDD 254
KE+ K RG + +G+ T S +SS S S S +S+ + S ASSR
Sbjct: 50 KESSEKDRGRDKTRKRHSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSS 109
Query: 255 GDTRSEHSYSESGASGSS 272
+RS S S SG+ S
Sbjct: 110 STSRSSSSSSSSGSPSPS 127
>gi|88973230 PREDICTED: similar to ribonucleic acid binding protein
S1 isoform 3 [Homo sapiens]
Length = 305
Score = 31.2 bits (69), Expect = 1.2
Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Query: 196 KETEWKWRGLVEAIDTQVDGTGAD-TMSDTSSVSLEVSPGSRETSAATLSPGASSRGWDD 254
KE+ K RG + +G+ T S +SS S S S +S+ + S ASSR
Sbjct: 50 KESSEKDRGRDKTRKRHSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSS 109
Query: 255 GDTRSEHSYSESGASGSS 272
+RS S S SG+ S
Sbjct: 110 STSRSSSSSSSSGSPSPS 127
>gi|208431815 protein tyrosine phosphatase, receptor type, K isoform a
[Homo sapiens]
Length = 1446
Score = 30.8 bits (68), Expect = 1.6
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 60 TGRLFTESCSIS--PKLRSIAVYYDNPHMVPPDKCRCAVGSILSEGEESPSPELIDLY-Q 116
T RL E CSI+ P+ + D M+PPD+C + +I E + L+D Y Q
Sbjct: 1191 TPRLQAEDCSIACLPRNHDKNRFMD---MLPPDRCLPFLITIDGESSNYINAALMDSYRQ 1247
Query: 117 KFGFKVFSFPAPSHV 131
F V +P P+ V
Sbjct: 1248 PAAFIVTQYPLPNTV 1262
>gi|18860902 protein tyrosine phosphatase, receptor type, K isoform b
[Homo sapiens]
Length = 1440
Score = 30.8 bits (68), Expect = 1.6
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 60 TGRLFTESCSIS--PKLRSIAVYYDNPHMVPPDKCRCAVGSILSEGEESPSPELIDLY-Q 116
T RL E CSI+ P+ + D M+PPD+C + +I E + L+D Y Q
Sbjct: 1185 TPRLQAEDCSIACLPRNHDKNRFMD---MLPPDRCLPFLITIDGESSNYINAALMDSYRQ 1241
Query: 117 KFGFKVFSFPAPSHV 131
F V +P P+ V
Sbjct: 1242 PAAFIVTQYPLPNTV 1256
>gi|4505379 nuclear factor erythroid 2-like 1 [Homo sapiens]
Length = 772
Score = 30.8 bits (68), Expect = 1.6
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 9/73 (12%)
Query: 216 TGADTMSDTSSVSLEVSPGSRETSAATLSPGASSRGWDDGDTRSEHSYSESGASG--SSF 273
+G S S SL S GS +S+++ S +S+ + + S+SE GA G S
Sbjct: 477 SGLSLDSSHSPSSLSSSEGSSSSSSSSSSSSSSA------SSSASSSFSEEGAVGYSSDS 530
Query: 274 EELDL-EGEGPLG 285
E LDL E EG +G
Sbjct: 531 ETLDLEEAEGAVG 543
>gi|187937179 apoptosis-associated tyrosine kinase [Homo sapiens]
Length = 1374
Score = 30.8 bits (68), Expect = 1.6
Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 9/82 (10%)
Query: 217 GADTMSDTSSVSLEVSPGSRE--TSAATLSPGASSRGWDDG-DTRSEHS------YSESG 267
G D+ + S G E + +AT G R D G DT + S ++ G
Sbjct: 898 GTPDSLDSLDIPSSASDGGYEVFSPSATGPSGGQPRALDSGYDTENYESPEFVLKEAQEG 957
Query: 268 ASGSSFEELDLEGEGPLGESRL 289
+F EL EGEGP E+RL
Sbjct: 958 CEPQAFAELASEGEGPGPETRL 979
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 30.8 bits (68), Expect = 1.6
Identities = 28/123 (22%), Positives = 48/123 (39%), Gaps = 4/123 (3%)
Query: 194 EMKETEWKWRGLVEAIDTQVDGTG-ADTMSDTSSVSLEVSPGSRETSAATLSPGASSRGW 252
E+ E E + G+ E +T G+G D + ++ + PG + + +P A
Sbjct: 1786 ELGEAEQEGEGISERGETGGQGSGHEDNLQGEAAAGGDQDPGQSDGAEGIEAPEAEGEAQ 1845
Query: 253 --DDGDTRSEHSYSESGASGSSFEELDLEGEGPLGESRLDPGTEPLGTTKWLWEPTAPEK 310
+G E A G + E + + E P E P +E + T + WE +
Sbjct: 1846 PESEGVEAPEAEGDAQEAEGEAQPESE-DVEAPEAEGEAQPESEDVETPEAEWEVQPESE 1904
Query: 311 GKE 313
G E
Sbjct: 1905 GAE 1907
>gi|119220598 apolipoprotein B48 receptor [Homo sapiens]
Length = 1088
Score = 30.8 bits (68), Expect = 1.6
Identities = 28/101 (27%), Positives = 40/101 (39%), Gaps = 10/101 (9%)
Query: 197 ETEWKWRGLVEAIDTQVDGTGADTMSDTSSVSLEVSPGSRETSAA-TLSPGASSRGWDDG 255
E+EW W G + +G + + E+ G RE A T PGA G +
Sbjct: 197 ESEWTWHG-------ETEGKAGAVGPKAAGDNREMEQGVREADAGETEEPGAEGAGKGEE 249
Query: 256 DTRSEHSYSESGASGSSFEELDLEGEGPLG--ESRLDPGTE 294
E + + A G+ + E G LG E+R PG E
Sbjct: 250 VVVVEKACESTRAWGTWGPGAEPEDWGILGREEARTTPGRE 290
>gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribose
polymerase [Homo sapiens]
Length = 1327
Score = 30.4 bits (67), Expect = 2.1
Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
Query: 213 VDGTGADTMSDT--SSVSLEVSPGSRETSAATLSPGASSRGWDDGDTRSEHSYSESGAS- 269
VDGT + + T + + V P +SAA ++P + G ++ + S S S +S
Sbjct: 84 VDGTSCCSTTSTICTVAAAPVVPAVSTSSAAGVAPNPAGSGSNNSPSSSSSPTSSSSSSP 143
Query: 270 ---GSSFEE----LDLEGEGPLGESRLDPGT 293
GSS E + PLG PGT
Sbjct: 144 SSPGSSLAESPEAAGVSSTAPLGPGAAGPGT 174
>gi|224586880 Ras protein-specific guanine nucleotide-releasing
factor 1 isoform 3 [Homo sapiens]
Length = 1257
Score = 30.0 bits (66), Expect = 2.8
Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 4/106 (3%)
Query: 207 EAIDTQVDGTGADTMSDTSSVSLEVSPGSRETSAATLSPGASSRGWDDGDTRSEHSYSES 266
+A+D ++ + S S + +TS +S +++ D+GDT E S
Sbjct: 752 KALDLAALSCNSNGYTSMYSAMSPFSKATLDTSKLYVSSSFTNKIPDEGDTTPEKPEDPS 811
Query: 267 GASGSSFEELDLEGEGPLGESRLDPGTEPLGTTKWLWEPTAPEKGK 312
S S E+ + E + +++ D G TK PT P+ K
Sbjct: 812 ALSKQS-SEVSMREESDIDQNQSDDGDTETSPTK---SPTTPKSVK 853
>gi|24797099 Ras protein-specific guanine nucleotide-releasing
factor 1 isoform 1 [Homo sapiens]
Length = 1273
Score = 30.0 bits (66), Expect = 2.8
Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 4/106 (3%)
Query: 207 EAIDTQVDGTGADTMSDTSSVSLEVSPGSRETSAATLSPGASSRGWDDGDTRSEHSYSES 266
+A+D ++ + S S + +TS +S +++ D+GDT E S
Sbjct: 768 KALDLAALSCNSNGYTSMYSAMSPFSKATLDTSKLYVSSSFTNKIPDEGDTTPEKPEDPS 827
Query: 267 GASGSSFEELDLEGEGPLGESRLDPGTEPLGTTKWLWEPTAPEKGK 312
S S E+ + E + +++ D G TK PT P+ K
Sbjct: 828 ALSKQS-SEVSMREESDIDQNQSDDGDTETSPTK---SPTTPKSVK 869
>gi|156104903 myomesin 2 [Homo sapiens]
Length = 1465
Score = 30.0 bits (66), Expect = 2.8
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Query: 213 VDGTGADTMSDTSS-VSLEVSPGSRETSAATLSPGASSRGWD--DGDTRSEHSYSESGAS 269
V+ G SDTS V +E PG++E SA G G+D + S+ ++ +S
Sbjct: 890 VNANGVGKPSDTSEPVLVEARPGTKEISAGVDEQGNIYLGFDCQEMTDASQFTWCKSYEE 949
Query: 270 GSSFEELDLEGEGPLGESRL-DPGTEPLGT 298
S E +E G + L +P E LGT
Sbjct: 950 ISDDERFKIETVGDHSKLYLKNPDKEDLGT 979
>gi|122937243 dual specificity phosphatase 27 [Homo sapiens]
Length = 1158
Score = 29.3 bits (64), Expect = 4.7
Identities = 29/84 (34%), Positives = 37/84 (44%), Gaps = 16/84 (19%)
Query: 220 TMSDTSSVSLEVSP-----------GSRETSAATLSPG-ASSRGWDDGDTRSEHSYSESG 267
T ++TSS S E SP RE S P A SR W+D + S+ +SE G
Sbjct: 1025 TYNETSS-SREESPEPYFFRRTPESSEREESPEPQRPNWARSRDWEDVEESSKSDFSEFG 1083
Query: 268 AS---GSSFEELDLEGEGPLGESR 288
A SF + EGE E+R
Sbjct: 1084 AKRKFTQSFMRSEEEGEKERTENR 1107
>gi|24797101 Ras protein-specific guanine nucleotide-releasing
factor 1 isoform 2 [Homo sapiens]
Length = 489
Score = 29.3 bits (64), Expect = 4.7
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 232 SPGSRETSAATLSPGASSRGWDDGDTRSEHSYSESGASGSSFEELDLEGEGPLGESRLDP 291
S + +TS +S +++ D+GDT E S S S E+ + E + +++ D
Sbjct: 9 SKATLDTSKLYVSSSFTNKIPDEGDTTPEKPEDPSALSKQS-SEVSMREESDIDQNQSDD 67
Query: 292 GTEPLGTTKWLWEPTAPEKGK 312
G TK PT P+ K
Sbjct: 68 GDTETSPTK---SPTTPKSVK 85
>gi|17978466 cyclin T1 [Homo sapiens]
Length = 726
Score = 29.3 bits (64), Expect = 4.7
Identities = 15/57 (26%), Positives = 25/57 (43%)
Query: 193 PEMKETEWKWRGLVEAIDTQVDGTGADTMSDTSSVSLEVSPGSRETSAATLSPGASS 249
P + W WR A T+ D G D + ++ +S S +T+ A L ++S
Sbjct: 249 PNRLKRIWNWRACEAAKKTKADDRGTDEKTSEQTILNMISQSSSDTTIAGLMSMSTS 305
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.134 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,520,692
Number of Sequences: 37866
Number of extensions: 646649
Number of successful extensions: 2207
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 2162
Number of HSP's gapped (non-prelim): 91
length of query: 313
length of database: 18,247,518
effective HSP length: 102
effective length of query: 211
effective length of database: 14,385,186
effective search space: 3035274246
effective search space used: 3035274246
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.