Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 190570165
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|190570165 beta-1,4-galactosyltransferase 6 [Homo sapiens]
(382 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|190570165 beta-1,4-galactosyltransferase 6 [Homo sapiens] 806 0.0
gi|4757828 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 5 ... 590 e-169
gi|4502349 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 3 ... 240 1e-63
gi|53759113 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 2... 230 2e-60
gi|4502347 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 2 ... 230 2e-60
gi|13929462 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 1... 226 3e-59
gi|47078258 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 4... 206 3e-53
gi|9994175 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 4 ... 206 3e-53
gi|6005952 xylosylprotein beta 1,4-galactosyltransferase 7 [Homo... 125 8e-29
gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transfera... 37 0.039
gi|31542309 chondroitin sulfate synthase 1 [Homo sapiens] 32 0.73
gi|153266878 polypeptide N-acetylgalactosaminyltransferase 3 [Ho... 31 1.6
gi|115298684 polypeptide N-acetylgalactosaminyltransferase 6 [Ho... 31 2.1
gi|74271903 chondroitin sulfate synthase 3 [Homo sapiens] 31 2.1
gi|71043500 beta 1,4-N-acetylgalactosaminyltransferase-transfera... 30 4.7
gi|149363656 SEC15-like 2 [Homo sapiens] 29 8.1
>gi|190570165 beta-1,4-galactosyltransferase 6 [Homo sapiens]
Length = 382
Score = 806 bits (2081), Expect = 0.0
Identities = 382/382 (100%), Positives = 382/382 (100%)
Query: 1 MSVLRRMMRVSNRSLLAFIFFFSLSSSCLYFIYVAPGIANTYLFMVQARGIMLRENVKTI 60
MSVLRRMMRVSNRSLLAFIFFFSLSSSCLYFIYVAPGIANTYLFMVQARGIMLRENVKTI
Sbjct: 1 MSVLRRMMRVSNRSLLAFIFFFSLSSSCLYFIYVAPGIANTYLFMVQARGIMLRENVKTI 60
Query: 61 GHMIRLYTNKNSTLNGTDYPEGNNSSDYLVQTTTYLPENFTYSPYLPCPEKLPYMRGFLN 120
GHMIRLYTNKNSTLNGTDYPEGNNSSDYLVQTTTYLPENFTYSPYLPCPEKLPYMRGFLN
Sbjct: 61 GHMIRLYTNKNSTLNGTDYPEGNNSSDYLVQTTTYLPENFTYSPYLPCPEKLPYMRGFLN 120
Query: 121 VNVSEVSFDEIHQLFSKDLDIEPGGHWRPKDCKPRWKVAVLIPFRNRHEHLPIFFLHLIP 180
VNVSEVSFDEIHQLFSKDLDIEPGGHWRPKDCKPRWKVAVLIPFRNRHEHLPIFFLHLIP
Sbjct: 121 VNVSEVSFDEIHQLFSKDLDIEPGGHWRPKDCKPRWKVAVLIPFRNRHEHLPIFFLHLIP 180
Query: 181 MLQKQRLEFAFYVIEQTGTQPFNRAMLFNVGFKEAMKDSVWDCVIFHDVDHLPENDRNYY 240
MLQKQRLEFAFYVIEQTGTQPFNRAMLFNVGFKEAMKDSVWDCVIFHDVDHLPENDRNYY
Sbjct: 181 MLQKQRLEFAFYVIEQTGTQPFNRAMLFNVGFKEAMKDSVWDCVIFHDVDHLPENDRNYY 240
Query: 241 GCGEMPRHFAAKLDKYMYILPYKEFFGGVSGLTVEQFRKINGFPNAFWGWGGEDDDLWNR 300
GCGEMPRHFAAKLDKYMYILPYKEFFGGVSGLTVEQFRKINGFPNAFWGWGGEDDDLWNR
Sbjct: 241 GCGEMPRHFAAKLDKYMYILPYKEFFGGVSGLTVEQFRKINGFPNAFWGWGGEDDDLWNR 300
Query: 301 VHYAGYNVTRPEGDLGKYKSIPHHHRGEVQFLGRYKLLRYSKERQYIDGLNNLIYRPKIL 360
VHYAGYNVTRPEGDLGKYKSIPHHHRGEVQFLGRYKLLRYSKERQYIDGLNNLIYRPKIL
Sbjct: 301 VHYAGYNVTRPEGDLGKYKSIPHHHRGEVQFLGRYKLLRYSKERQYIDGLNNLIYRPKIL 360
Query: 361 VDRLYTNISVNLMPELAPIEDY 382
VDRLYTNISVNLMPELAPIEDY
Sbjct: 361 VDRLYTNISVNLMPELAPIEDY 382
>gi|4757828 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 5
[Homo sapiens]
Length = 388
Score = 590 bits (1520), Expect = e-169
Identities = 273/388 (70%), Positives = 321/388 (82%), Gaps = 6/388 (1%)
Query: 1 MSVLRRMMRVSNRSLLAFIFFFSLSSSCLYFIYVAPGIANTYLFMVQARGIMLRENVKTI 60
M R ++R+ RSLLA +FFFSLSSS LYF+YVAPGI NTYLFM+QA+GI++R+NV+TI
Sbjct: 1 MRARRGLLRLPRRSLLAALFFFSLSSSLLYFVYVAPGIVNTYLFMMQAQGILIRDNVRTI 60
Query: 61 GHMI------RLYTNKNSTLNGTDYPEGNNSSDYLVQTTTYLPENFTYSPYLPCPEKLPY 114
G + Y +NS++N +DYP N S+ +QTTT+LPE+FTY CPE+LP
Sbjct: 61 GAQVYEQVLRSAYAKRNSSVNDSDYPLDLNHSETFLQTTTFLPEDFTYFANHTCPERLPS 120
Query: 115 MRGFLNVNVSEVSFDEIHQLFSKDLDIEPGGHWRPKDCKPRWKVAVLIPFRNRHEHLPIF 174
M+G +++N+SE+ D IH+LFSKD I+ GGHW+P DC PRWKVA+LIPFRNRHEHLP+
Sbjct: 121 MKGPIDINMSEIGMDYIHELFSKDPTIKLGGHWKPSDCMPRWKVAILIPFRNRHEHLPVL 180
Query: 175 FLHLIPMLQKQRLEFAFYVIEQTGTQPFNRAMLFNVGFKEAMKDSVWDCVIFHDVDHLPE 234
F HL+PMLQ+QRL+FAFYV+EQ GTQPFNRAMLFNVGF+EAMKD WDC+IFHDVDH+PE
Sbjct: 181 FRHLLPMLQRQRLQFAFYVVEQVGTQPFNRAMLFNVGFQEAMKDLDWDCLIFHDVDHIPE 240
Query: 235 NDRNYYGCGEMPRHFAAKLDKYMYILPYKEFFGGVSGLTVEQFRKINGFPNAFWGWGGED 294
+DRNYYGCG+MPRHFA KLDKYMY+LPY EFFGGVSGLTVEQFRKINGFPNAFWGWGGED
Sbjct: 241 SDRNYYGCGQMPRHFATKLDKYMYLLPYTEFFGGVSGLTVEQFRKINGFPNAFWGWGGED 300
Query: 295 DDLWNRVHYAGYNVTRPEGDLGKYKSIPHHHRGEVQFLGRYKLLRYSKERQYIDGLNNLI 354
DDLWNRV AGY+V+RPEGD GKYKSIPHHHRGEVQFLGRY LLR SKERQ +DGLNNL
Sbjct: 301 DDLWNRVQNAGYSVSRPEGDTGKYKSIPHHHRGEVQFLGRYALLRKSKERQGLDGLNNLN 360
Query: 355 YRPKILVDRLYTNISVNLMPELAPIEDY 382
Y I D LY NI+VNL PELA + +Y
Sbjct: 361 YFANITYDALYKNITVNLTPELAQVNEY 388
>gi|4502349 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 3
[Homo sapiens]
Length = 393
Score = 240 bits (613), Expect = 1e-63
Identities = 121/275 (44%), Positives = 172/275 (62%), Gaps = 13/275 (4%)
Query: 104 PYLPCPEKLPYMRGFLNVNVSEVSFDEIHQLFSKDLDIEPGGHWRPKDCKPRWKVAVLIP 163
PY CPE+ P + G ++V+ S V + ++ ++ +EPGG +RP C+PR + A+++P
Sbjct: 75 PY--CPERSPLLVGPVSVSFSPVP--SLAEIVERNPRVEPGGRYRPAGCEPRSRTAIIVP 130
Query: 164 FRNRHEHLPIFFLHLIPMLQKQRLEFAFYVIEQTGTQPFNRAMLFNVGFKEAMKDSVWDC 223
R R HL + HL P LQ+Q+L + YVI Q G FNRA L NVG +EA++D WDC
Sbjct: 131 HRAREHHLRLLLYHLHPFLQRQQLAYGIYVIHQAGNGTFNRAKLLNVGVREALRDEEWDC 190
Query: 224 VIFHDVDHLPENDRNYYGCGEM-PRHFAAKLDKYMYILPYKEFFGGVSGLTVEQFRKING 282
+ HDVD LPEND N Y C PRH A ++K+ Y LPY ++FGGVS LT +Q+ K+NG
Sbjct: 191 LFLHDVDLLPENDHNLYVCDPRGPRHVAVAMNKFGYSLPYPQYFGGVSALTPDQYLKMNG 250
Query: 283 FPNAFWGWGGEDDDLWNRVHYAGYNVTRPEGDLGKYKSIPHH-HRGEVQFLGRYKLLRYS 341
FPN +WGWGGEDDD+ RV AG ++RP +G YK + H +G + R+ LL +
Sbjct: 251 FPNEYWGWGGEDDDIATRVRLAGMKISRPPTSVGHYKMVKHRGDKGNEENPHRFDLLVRT 310
Query: 342 KERQYIDGLNNLIYRPKILVDR----LYTNISVNL 372
+ DG+N+L Y+ L+ R LYTNI+ ++
Sbjct: 311 QNSWTQDGMNSLTYQ---LLARELGPLYTNITADI 342
>gi|53759113 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 2
[Homo sapiens]
Length = 372
Score = 230 bits (586), Expect = 2e-60
Identities = 138/370 (37%), Positives = 205/370 (55%), Gaps = 24/370 (6%)
Query: 9 RVSNRSLLAFIFFFSLSSSCLYFIYVAPGIANTYLFMVQARGIMLRENVKTIGHMIRLYT 68
RV LL + F L + LYF A +A + ARG H +
Sbjct: 11 RVCKAVLLLCLLHF-LVAVILYFDVYAQHLA--FFSRFSARGP---------AHALHPAA 58
Query: 69 NKNSTLNGTDYPEGNNSSDYLVQTTTYLPENFTYSPYLPCPEKLPYMRGFLNVNVSEVSF 128
+ +S+ + P SS L + + LP T PCP+ P + G L + +
Sbjct: 59 SSSSSSSNCSRPNATASSSGLPEVPSALPGP-TAPTLPPCPDSPPGLVGRLLIEFTSPM- 116
Query: 129 DEIHQLFSKDLDIEPGGHWRPKDCKPRWKVAVLIPFRNRHEHLPIFFLHLIPMLQKQRLE 188
+ ++ ++ + GG + P DC P VAV+IPFR+R HL + +L P+L++QRL
Sbjct: 117 -PLERVQRENPGVLMGGRYTPPDCTPAQTVAVIIPFRHREHHLRYWLHYLHPILRRQRLR 175
Query: 189 FAFYVIEQTGTQPFNRAMLFNVGFKEAMK-DSVWDCVIFHDVDHLPENDRNYYGCGEMPR 247
+ YVI Q G FNRA L NVGF EA+K D+ +DC IF DVD +P +DRN Y CG+ PR
Sbjct: 176 YGVYVINQHGEDTFNRAKLLNVGFLEALKEDAAYDCFIFSDVDLVPMDDRNLYRCGDQPR 235
Query: 248 HFAAKLDKYMYILPYKEFFGGVSGLTVEQFRKINGFPNAFWGWGGEDDDLWNRVHYAGYN 307
HFA +DK+ + LPY +FGGVSGL+ QF +INGFPN +WGWGGEDDD++NR+ G
Sbjct: 236 HFAIAMDKFGFRLPYAGYFGGVSGLSKAQFLRINGFPNEYWGWGGEDDDIFNRISLTGMK 295
Query: 308 VTRPEGDLGKYKSIPH----HHRGEVQFLGRYKLLRYSKERQYIDGLNNLIYRP-KILVD 362
++RP+ +G+Y+ I H H+ Q R+ ++ +K DG+ ++ Y+ ++
Sbjct: 296 ISRPDIRIGRYRMIKHDRDKHNEPNPQ---RFTKIQNTKLTMKRDGIGSVRYQVLEVSRQ 352
Query: 363 RLYTNISVNL 372
L+TNI+V++
Sbjct: 353 PLFTNITVDI 362
>gi|4502347 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 2
[Homo sapiens]
Length = 372
Score = 230 bits (586), Expect = 2e-60
Identities = 138/370 (37%), Positives = 205/370 (55%), Gaps = 24/370 (6%)
Query: 9 RVSNRSLLAFIFFFSLSSSCLYFIYVAPGIANTYLFMVQARGIMLRENVKTIGHMIRLYT 68
RV LL + F L + LYF A +A + ARG H +
Sbjct: 11 RVCKAVLLLCLLHF-LVAVILYFDVYAQHLA--FFSRFSARGP---------AHALHPAA 58
Query: 69 NKNSTLNGTDYPEGNNSSDYLVQTTTYLPENFTYSPYLPCPEKLPYMRGFLNVNVSEVSF 128
+ +S+ + P SS L + + LP T PCP+ P + G L + +
Sbjct: 59 SSSSSSSNCSRPNATASSSGLPEVPSALPGP-TAPTLPPCPDSPPGLVGRLLIEFTSPM- 116
Query: 129 DEIHQLFSKDLDIEPGGHWRPKDCKPRWKVAVLIPFRNRHEHLPIFFLHLIPMLQKQRLE 188
+ ++ ++ + GG + P DC P VAV+IPFR+R HL + +L P+L++QRL
Sbjct: 117 -PLERVQRENPGVLMGGRYTPPDCTPAQTVAVIIPFRHREHHLRYWLHYLHPILRRQRLR 175
Query: 189 FAFYVIEQTGTQPFNRAMLFNVGFKEAMK-DSVWDCVIFHDVDHLPENDRNYYGCGEMPR 247
+ YVI Q G FNRA L NVGF EA+K D+ +DC IF DVD +P +DRN Y CG+ PR
Sbjct: 176 YGVYVINQHGEDTFNRAKLLNVGFLEALKEDAAYDCFIFSDVDLVPMDDRNLYRCGDQPR 235
Query: 248 HFAAKLDKYMYILPYKEFFGGVSGLTVEQFRKINGFPNAFWGWGGEDDDLWNRVHYAGYN 307
HFA +DK+ + LPY +FGGVSGL+ QF +INGFPN +WGWGGEDDD++NR+ G
Sbjct: 236 HFAIAMDKFGFRLPYAGYFGGVSGLSKAQFLRINGFPNEYWGWGGEDDDIFNRISLTGMK 295
Query: 308 VTRPEGDLGKYKSIPH----HHRGEVQFLGRYKLLRYSKERQYIDGLNNLIYRP-KILVD 362
++RP+ +G+Y+ I H H+ Q R+ ++ +K DG+ ++ Y+ ++
Sbjct: 296 ISRPDIRIGRYRMIKHDRDKHNEPNPQ---RFTKIQNTKLTMKRDGIGSVRYQVLEVSRQ 352
Query: 363 RLYTNISVNL 372
L+TNI+V++
Sbjct: 353 PLFTNITVDI 362
>gi|13929462 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 1,
membrane-bound form [Homo sapiens]
Length = 398
Score = 226 bits (576), Expect = 3e-59
Identities = 117/283 (41%), Positives = 178/283 (62%), Gaps = 7/283 (2%)
Query: 94 TYLPENFTYSPYLP-CPEKLPYMRGFLNVNVSEVSFDEIHQLFSKDLDIEPGGHWRPKDC 152
T +P T + LP CPE+ P + G + + + ++ + ++ +++ GG + P+DC
Sbjct: 115 TSVPVPHTTALSLPACPEESPLLVGPMLIEFNMPV--DLELVAKQNPNVKMGGRYAPRDC 172
Query: 153 KPRWKVAVLIPFRNRHEHLPIFFLHLIPMLQKQRLEFAFYVIEQTGTQPFNRAMLFNVGF 212
KVA++IPFRNR EHL + +L P+LQ+Q+L++ YVI Q G FNRA L NVGF
Sbjct: 173 VSPHKVAIIIPFRNRQEHLKYWLYYLHPVLQRQQLDYGIYVINQAGDTIFNRAKLLNVGF 232
Query: 213 KEAMKDSVWDCVIFHDVDHLPENDRNYYGCGEMPRHFAAKLDKYMYILPYKEFFGGVSGL 272
+EA+KD + C +F DVD +P ND N Y C PRH + +DK+ + LPY ++FGGVS L
Sbjct: 233 QEALKDYDYTCFVFSDVDLIPMNDHNAYRCFSQPRHISVAMDKFGFSLPYVQYFGGVSAL 292
Query: 273 TVEQFRKINGFPNAFWGWGGEDDDLWNRVHYAGYNVTRPEGDLGKYKSIPH-HHRGEVQF 331
+ +QF INGFPN +WGWGGEDDD++NR+ + G +++RP +G+ + I H +
Sbjct: 293 SKQQFLTINGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGRCRMIRHSRDKKNEPN 352
Query: 332 LGRYKLLRYSKERQYIDGLNNLIYRPKILVDR--LYTNISVNL 372
R+ + ++KE DGLN+L Y+ + V R LYT I+V++
Sbjct: 353 PQRFDRIAHTKETMLSDGLNSLTYQ-VLDVQRYPLYTQITVDI 394
>gi|47078258 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 4
[Homo sapiens]
Length = 344
Score = 206 bits (524), Expect = 3e-53
Identities = 113/275 (41%), Positives = 153/275 (55%), Gaps = 23/275 (8%)
Query: 108 CPEKLPYMRGFLNVNVSEVSFDEIHQLFSKDLDIEP---------GGHWRPKDCKPRWKV 158
CP PY+RG + +F DL +E G +RP++CK +V
Sbjct: 77 CPSVSPYLRG------------QSKLIFKPDLTLEEVQAENPKVSRGRYRPQECKALQRV 124
Query: 159 AVLIPFRNRHEHLPIFFLHLIPMLQKQRLEFAFYVIEQTGTQPFNRAMLFNVGFKEAMKD 218
A+L+P RNR +HL HL P LQ+Q+L++ YVI Q + FNRA L NVG+ EA+K+
Sbjct: 125 AILVPHRNREKHLMYLLEHLHPFLQRQQLDYGIYVIHQAEGKKFNRAKLLNVGYLEALKE 184
Query: 219 SVWDCVIFHDVDHLPENDRNYYGCGEMPRHFAAKLDKYMYILPYKEFFGGVSGLTVEQFR 278
WDC IFHDVD +PEND N Y C E P+H + Y L Y +FGGV+ L+ EQF
Sbjct: 185 ENWDCFIFHDVDLVPENDFNLYKCEEHPKHLVVGRNSTGYRLRYSGYFGGVTALSREQFF 244
Query: 279 KINGFPNAFWGWGGEDDDLWNRVHYAGYNVTRPEGDLGKYKSIPH-HHRGEVQFLGRYKL 337
K+NGF N +WGWGGEDDDL RV ++RP ++GKY + H +G R KL
Sbjct: 245 KVNGFSNNYWGWGGEDDDLRLRVELQRMKISRPLPEVGKYTMVFHTRDKGNEVNAERMKL 304
Query: 338 LRYSKERQYIDGLNNLIYR-PKILVDRLYTNISVN 371
L DGL++ Y+ + + LY NI+V+
Sbjct: 305 LHQVSRVWRTDGLSSCSYKLVSVEHNPLYINITVD 339
>gi|9994175 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 4
[Homo sapiens]
Length = 344
Score = 206 bits (524), Expect = 3e-53
Identities = 113/275 (41%), Positives = 153/275 (55%), Gaps = 23/275 (8%)
Query: 108 CPEKLPYMRGFLNVNVSEVSFDEIHQLFSKDLDIEP---------GGHWRPKDCKPRWKV 158
CP PY+RG + +F DL +E G +RP++CK +V
Sbjct: 77 CPSVSPYLRG------------QSKLIFKPDLTLEEVQAENPKVSRGRYRPQECKALQRV 124
Query: 159 AVLIPFRNRHEHLPIFFLHLIPMLQKQRLEFAFYVIEQTGTQPFNRAMLFNVGFKEAMKD 218
A+L+P RNR +HL HL P LQ+Q+L++ YVI Q + FNRA L NVG+ EA+K+
Sbjct: 125 AILVPHRNREKHLMYLLEHLHPFLQRQQLDYGIYVIHQAEGKKFNRAKLLNVGYLEALKE 184
Query: 219 SVWDCVIFHDVDHLPENDRNYYGCGEMPRHFAAKLDKYMYILPYKEFFGGVSGLTVEQFR 278
WDC IFHDVD +PEND N Y C E P+H + Y L Y +FGGV+ L+ EQF
Sbjct: 185 ENWDCFIFHDVDLVPENDFNLYKCEEHPKHLVVGRNSTGYRLRYSGYFGGVTALSREQFF 244
Query: 279 KINGFPNAFWGWGGEDDDLWNRVHYAGYNVTRPEGDLGKYKSIPH-HHRGEVQFLGRYKL 337
K+NGF N +WGWGGEDDDL RV ++RP ++GKY + H +G R KL
Sbjct: 245 KVNGFSNNYWGWGGEDDDLRLRVELQRMKISRPLPEVGKYTMVFHTRDKGNEVNAERMKL 304
Query: 338 LRYSKERQYIDGLNNLIYR-PKILVDRLYTNISVN 371
L DGL++ Y+ + + LY NI+V+
Sbjct: 305 LHQVSRVWRTDGLSSCSYKLVSVEHNPLYINITVD 339
>gi|6005952 xylosylprotein beta 1,4-galactosyltransferase 7 [Homo
sapiens]
Length = 327
Score = 125 bits (313), Expect = 8e-29
Identities = 76/217 (35%), Positives = 110/217 (50%), Gaps = 8/217 (3%)
Query: 143 PGGHWRPKDCKPRWKVAVLIPFRNRHEHLPIFFLHLIPMLQKQRLEFAFYVIEQTGTQPF 202
P HW ++AVL+PFR R E L +F H+ L ++++ YV+ Q F
Sbjct: 80 PPEHWEEDASWGPHRLAVLVPFRERFEELLVFVPHMRRFLSRKKIRHHIYVLNQVDHFRF 139
Query: 203 NRAMLFNVGFKEAMKDSVWDCVIFHDVDHLPENDRNYYGCGEM-PRHFAAKLDKYMYILP 261
NRA L NVGF E+ + D + HDVD LP N+ YG E P H A+ +Y
Sbjct: 140 NRAALINVGFLESSNST--DYIAMHDVDLLPLNEELDYGFPEAGPFHVASPELHPLY--H 195
Query: 262 YKEFFGGVSGLTVEQFRKINGFPNAFWGWGGEDDDLWNRVHYAGYNVTRPEGDLGKYKSI 321
YK + GG+ L+ + +R NG N FWGWG EDD+ + R+ AG + RP G YK+
Sbjct: 196 YKTYVGGILLLSKQHYRLCNGMSNRFWGWGREDDEFYRRIKGAGLQLFRPSGITTGYKTF 255
Query: 322 PHHHRGEVQFLGRYKLLRYSKERQYID---GLNNLIY 355
H H + + ++ +E+ +D GLN + Y
Sbjct: 256 RHLHDPAWRKRDQKRIAAQKQEQFKVDREGGLNTVKY 292
>gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transferase 4
[Homo sapiens]
Length = 1039
Score = 36.6 bits (83), Expect = 0.039
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 16/89 (17%)
Query: 242 CGEMPR--HFAAKLDKYMYILPYKEFFGGVSGLTVEQFRKINGFPNAFWGWGGEDDDLWN 299
CG PR H +++ + YK F V G+ E+FR WGGED +L +
Sbjct: 948 CGSSPRDPHGYWEVNGFGLFGIYKSDFDRVGGMNTEEFRD---------QWGGEDWELLD 998
Query: 300 RVHYAGYNVTRPEGDLGKYKSIPHHHRGE 328
RV AG V R + ++ HH+ +
Sbjct: 999 RVLQAGLEVERL-----RLRNFYHHYHSK 1022
>gi|31542309 chondroitin sulfate synthase 1 [Homo sapiens]
Length = 802
Score = 32.3 bits (72), Expect = 0.73
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 262 YKEFFGGVSGLTVEQFRKINGFPNAFWGWGGEDDDLWNRVHYAGYNVTRPE 312
++ + G++ + ++ GF + GWG ED DL+N+V AG R +
Sbjct: 688 WRNYGFGITCIYKGDLVRVGGFDVSIQGWGLEDVDLFNKVVQAGLKTFRSQ 738
>gi|153266878 polypeptide N-acetylgalactosaminyltransferase 3 [Homo
sapiens]
Length = 633
Score = 31.2 bits (69), Expect = 1.6
Identities = 17/66 (25%), Positives = 28/66 (42%)
Query: 240 YGCGEMPRHFAAKLDKYMYILPYKEFFGGVSGLTVEQFRKINGFPNAFWGWGGEDDDLWN 299
+G +P H + Y + F GG+ ++ E F I + WGGE+ ++
Sbjct: 337 FGWESLPDHEKQRRKDETYPIKTPTFAGGLFSISKEYFEYIGSYDEEMEIWGGENIEMSF 396
Query: 300 RVHYAG 305
RV G
Sbjct: 397 RVWQCG 402
>gi|115298684 polypeptide N-acetylgalactosaminyltransferase 6 [Homo
sapiens]
Length = 622
Score = 30.8 bits (68), Expect = 2.1
Identities = 17/66 (25%), Positives = 28/66 (42%)
Query: 240 YGCGEMPRHFAAKLDKYMYILPYKEFFGGVSGLTVEQFRKINGFPNAFWGWGGEDDDLWN 299
+G +P H + Y + F GG+ ++ F I + N WGGE+ ++
Sbjct: 329 FGWETLPPHEKQRRKDETYPIKSPTFAGGLFSISKSYFEHIGTYDNQMEIWGGENVEMSF 388
Query: 300 RVHYAG 305
RV G
Sbjct: 389 RVWQCG 394
>gi|74271903 chondroitin sulfate synthase 3 [Homo sapiens]
Length = 882
Score = 30.8 bits (68), Expect = 2.1
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 262 YKEFFGGVSGLTVEQFRKINGFPNAFWGWGGEDDDLWNRVHYAGYNVTRPE 312
++++ G++ + GF + GWG ED DL+N+V +G R +
Sbjct: 775 WRDYGYGITCIYKSDLLGAGGFDTSIQGWGLEDVDLYNKVILSGLRPFRSQ 825
>gi|71043500 beta 1,4-N-acetylgalactosaminyltransferase-transferase
3 [Homo sapiens]
Length = 998
Score = 29.6 bits (65), Expect = 4.7
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 9/49 (18%)
Query: 262 YKEFFGGVSGLTVEQFRKINGFPNAFWGWGGEDDDLWNRVHYAGYNVTR 310
YK + G+ ++FR WGGED +L +R+ AG +V R
Sbjct: 934 YKSDLDRIGGMNTKEFRD---------RWGGEDWELLDRILQAGLDVER 973
>gi|149363656 SEC15-like 2 [Homo sapiens]
Length = 811
Score = 28.9 bits (63), Expect = 8.1
Identities = 26/95 (27%), Positives = 33/95 (34%), Gaps = 11/95 (11%)
Query: 24 LSSSCLYFIYVAPGIANTYLFMVQARGIMLRENVKTIGHMIR--LYTNKNSTLNG----T 77
L SC Y I N V + K H +YTN N ++
Sbjct: 566 LEKSCKYLEEFITNITNVLPETVHTTKLYGTTTFKDARHAAEEEIYTNLNQKIDQFLQLA 625
Query: 78 DYPE-----GNNSSDYLVQTTTYLPENFTYSPYLP 107
DY GN +SDYLV +L F +LP
Sbjct: 626 DYDWMTGDLGNKASDYLVDLIAFLRSTFAVFTHLP 660
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.325 0.143 0.455
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,856,165
Number of Sequences: 37866
Number of extensions: 694649
Number of successful extensions: 1514
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1493
Number of HSP's gapped (non-prelim): 16
length of query: 382
length of database: 18,247,518
effective HSP length: 104
effective length of query: 278
effective length of database: 14,309,454
effective search space: 3978028212
effective search space used: 3978028212
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.