Search of human proteins with 190358539

Search of human proteins with 190358539

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|190358539 mitochondrial glycerol 3-phosphate acyltransferase
[Homo sapiens]
         (828 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|190358539 mitochondrial glycerol 3-phosphate acyltransferase ...  1653   0.0  
gi|116812614 glycerol-3-phosphate acyltransferase 2, mitochondri...   358   1e-98
gi|7657134 glyceronephosphate O-acyltransferase [Homo sapiens]        135   2e-31
gi|239747810 PREDICTED: hypothetical protein LOC653924 [Homo sap...   101   2e-21
gi|239741682 PREDICTED: hypothetical protein LOC653924 [Homo sap...    76   1e-13
gi|239753233 PREDICTED: similar to hCG1732629 [Homo sapiens]           73   9e-13
gi|113205087 DENN/MADD domain containing 1C [Homo sapiens]             35   0.37 
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo...    34   0.64 
gi|154277116 spectrin repeat containing, nuclear envelope 1 isof...    34   0.64 
gi|110349786 Alstrom syndrome 1 [Homo sapiens]                         33   1.1  
gi|146219843 Snf2-related CBP activator protein [Homo sapiens]         33   1.4  
gi|42718011 cyclic nucleotide gated channel alpha 2 [Homo sapiens]     33   1.4  
gi|114155133 dynein, axonemal, heavy chain 9 isoform 2 [Homo sap...    32   1.8  
gi|4757900 calreticulin precursor [Homo sapiens]                       32   2.4  
gi|214010183 amyloid beta (A4) precursor-like protein 2 isoform ...    32   3.2  
gi|40556389 zona pellucida binding protein 2 isoform 2 [Homo sap...    31   4.1  
gi|84875535 zona pellucida binding protein 2 isoform 1 [Homo sap...    31   4.1  
gi|70608109 integrator complex subunit 8 [Homo sapiens]                31   5.4  
gi|59806361 hypothetical protein LOC387104 [Homo sapiens]              30   7.0  
gi|194097487 RAN binding protein 3 isoform RANBP3-a [Homo sapiens]     30   7.0  
gi|105990532 apolipoprotein B precursor [Homo sapiens]                 30   9.2  

>gi|190358539 mitochondrial glycerol 3-phosphate acyltransferase
           [Homo sapiens]
          Length = 828

 Score = 1653 bits (4280), Expect = 0.0
 Identities = 828/828 (100%), Positives = 828/828 (100%)

Query: 1   MDESALTLGTIDVSYLPHSSEYSVGRCKHTSEEWGECGFRPTIFRSATLKWKESLMSRKR 60
           MDESALTLGTIDVSYLPHSSEYSVGRCKHTSEEWGECGFRPTIFRSATLKWKESLMSRKR
Sbjct: 1   MDESALTLGTIDVSYLPHSSEYSVGRCKHTSEEWGECGFRPTIFRSATLKWKESLMSRKR 60

Query: 61  PFVGRCCYSCTPQSWDKFFNPSIPSLGLRNVIYINETHTRHRGWLARRLSYVLFIQERDV 120
           PFVGRCCYSCTPQSWDKFFNPSIPSLGLRNVIYINETHTRHRGWLARRLSYVLFIQERDV
Sbjct: 61  PFVGRCCYSCTPQSWDKFFNPSIPSLGLRNVIYINETHTRHRGWLARRLSYVLFIQERDV 120

Query: 121 HKGMFATNVTENVLNSSRVQEAIAEVAAELNPDGSAQQQSKAVNKVKKKAKRILQEMVAT 180
           HKGMFATNVTENVLNSSRVQEAIAEVAAELNPDGSAQQQSKAVNKVKKKAKRILQEMVAT
Sbjct: 121 HKGMFATNVTENVLNSSRVQEAIAEVAAELNPDGSAQQQSKAVNKVKKKAKRILQEMVAT 180

Query: 181 VSPAMIRLTGWVLLKLFNSFFWNIQIHKGQLEMVKAATETNLPLLFLPVHRSHIDYLLLT 240
           VSPAMIRLTGWVLLKLFNSFFWNIQIHKGQLEMVKAATETNLPLLFLPVHRSHIDYLLLT
Sbjct: 181 VSPAMIRLTGWVLLKLFNSFFWNIQIHKGQLEMVKAATETNLPLLFLPVHRSHIDYLLLT 240

Query: 241 FILFCHNIKAPYIASGNNLNIPIFSTLIHKLGGFFIRRRLDETPDGRKDVLYRALLHGHI 300
           FILFCHNIKAPYIASGNNLNIPIFSTLIHKLGGFFIRRRLDETPDGRKDVLYRALLHGHI
Sbjct: 241 FILFCHNIKAPYIASGNNLNIPIFSTLIHKLGGFFIRRRLDETPDGRKDVLYRALLHGHI 300

Query: 301 VELLRQQQFLEIFLEGTRSRSGKTSCARAGLLSVVVDTLSTNVIPDILIIPVGISYDRII 360
           VELLRQQQFLEIFLEGTRSRSGKTSCARAGLLSVVVDTLSTNVIPDILIIPVGISYDRII
Sbjct: 301 VELLRQQQFLEIFLEGTRSRSGKTSCARAGLLSVVVDTLSTNVIPDILIIPVGISYDRII 360

Query: 361 EGHYNGEQLGKPKKNESLWSVARGVIRMLRKNYGCVRVDFAQPFSLKEYLESQSQKPVSA 420
           EGHYNGEQLGKPKKNESLWSVARGVIRMLRKNYGCVRVDFAQPFSLKEYLESQSQKPVSA
Sbjct: 361 EGHYNGEQLGKPKKNESLWSVARGVIRMLRKNYGCVRVDFAQPFSLKEYLESQSQKPVSA 420

Query: 421 LLSLEQALLPAILPSRPSDAADEGRDTSINESRNATDESLRRRLIANLAEHILFTASKSC 480
           LLSLEQALLPAILPSRPSDAADEGRDTSINESRNATDESLRRRLIANLAEHILFTASKSC
Sbjct: 421 LLSLEQALLPAILPSRPSDAADEGRDTSINESRNATDESLRRRLIANLAEHILFTASKSC 480

Query: 481 AIMSTHIVACLLLYRHRQGIDLSTLVEDFFVMKEEVLARDFDLGFSGNSEDVVMHAIQLL 540
           AIMSTHIVACLLLYRHRQGIDLSTLVEDFFVMKEEVLARDFDLGFSGNSEDVVMHAIQLL
Sbjct: 481 AIMSTHIVACLLLYRHRQGIDLSTLVEDFFVMKEEVLARDFDLGFSGNSEDVVMHAIQLL 540

Query: 541 GNCVTITHTSRNDEFFITPSTTVPSVFELNFYSNGVLHVFIMEAIIACSLYAVLNKRGLG 600
           GNCVTITHTSRNDEFFITPSTTVPSVFELNFYSNGVLHVFIMEAIIACSLYAVLNKRGLG
Sbjct: 541 GNCVTITHTSRNDEFFITPSTTVPSVFELNFYSNGVLHVFIMEAIIACSLYAVLNKRGLG 600

Query: 601 GPTSTPPNLISQEQLVRKAASLCYLLSNEGTISLPCQTFYQVCHETVGKFIQYGILTVAE 660
           GPTSTPPNLISQEQLVRKAASLCYLLSNEGTISLPCQTFYQVCHETVGKFIQYGILTVAE
Sbjct: 601 GPTSTPPNLISQEQLVRKAASLCYLLSNEGTISLPCQTFYQVCHETVGKFIQYGILTVAE 660

Query: 661 HDDQEDISPSLAEQQWDKKLPEPLSWRSDEEDEDSDFGEEQRDCYLKVSQSKEHQQFITF 720
           HDDQEDISPSLAEQQWDKKLPEPLSWRSDEEDEDSDFGEEQRDCYLKVSQSKEHQQFITF
Sbjct: 661 HDDQEDISPSLAEQQWDKKLPEPLSWRSDEEDEDSDFGEEQRDCYLKVSQSKEHQQFITF 720

Query: 721 LQRLLGPLLEAYSSAAIFVHNFSGPVPEPEYLQKLHKYLITRTERNVAVYAESATYCLVK 780
           LQRLLGPLLEAYSSAAIFVHNFSGPVPEPEYLQKLHKYLITRTERNVAVYAESATYCLVK
Sbjct: 721 LQRLLGPLLEAYSSAAIFVHNFSGPVPEPEYLQKLHKYLITRTERNVAVYAESATYCLVK 780

Query: 781 NAVKMFKDIGVFKETKQKRVSVLELSSTFLPQCNRQKLLEYILSFVVL 828
           NAVKMFKDIGVFKETKQKRVSVLELSSTFLPQCNRQKLLEYILSFVVL
Sbjct: 781 NAVKMFKDIGVFKETKQKRVSVLELSSTFLPQCNRQKLLEYILSFVVL 828


>gi|116812614 glycerol-3-phosphate acyltransferase 2, mitochondrial
           [Homo sapiens]
          Length = 795

 Score =  358 bits (919), Expect = 1e-98
 Identities = 259/790 (32%), Positives = 399/790 (50%), Gaps = 55/790 (6%)

Query: 56  MSRKRPFVGRCCYSCTPQSWDKFFNPSIPSLGLRNVIYINETHTRHRGWLARRLSYVLFI 115
           + + RPFVGRCC +CTP+SW+  F+ SI  LG  NVI + E +TR RGWL RRL Y L+ 
Sbjct: 40  LGKYRPFVGRCCQTCTPKSWESLFHRSITDLGFCNVILVKEENTRFRGWLVRRLCYFLWS 99

Query: 116 QERDVHKGMFATNVTENVLNSSRVQEAIAEVAAELNPDGSAQQQSKAVNKVKKKAKRILQ 175
            E+ +       +V + ++ S+ VQ  ++       P G+ + Q    + VKK+ +RIL 
Sbjct: 100 LEQHIPP---CQDVPQKIMESTGVQNLLSGRV----PGGTGEGQ--VPDLVKKEVQRILG 150

Query: 176 EMVATVSPAMIRLTGWVLLKLFNSFFWNIQIHKGQLEMVKAATETNLPLLFLPVHRSHID 235
            + A   P ++RL  W LL+  N  F N+Q+HKGQ++MV+ A +  LPL+ L  H++ +D
Sbjct: 151 HIQAPPRPFLVRLFSWALLRFLNCLFLNVQLHKGQMKMVQKAAQAGLPLVLLSTHKTLLD 210

Query: 236 YLLLTFILFCHNIKAPYIASGNNLNIPIFSTLIHKLGGFFIRRRLDETPDGRKDVLYRAL 295
            +LL F+L    +    +A  +    P    L+ KLGG F+      + D  + +L RA+
Sbjct: 211 GILLPFMLLSQGLGVLRVAWDSRACSPALRALLRKLGGLFLPPEASLSLDSSEGLLARAV 270

Query: 296 LHGHIVELLRQQQFLEIFLEGTRSRSG-KTSCARAGLLSVVVDTLSTNVIPDILIIPVGI 354
           +   I +LL   Q L IFLE      G + S      +  VV  +   ++PD L++PV +
Sbjct: 271 VQAVIEQLLVSGQPLLIFLEEPPGALGPRLSALGQAWVGFVVQAVQVGIVPDALLVPVAV 330

Query: 355 SYDRIIEGHYNGEQLGKPKKNESLWSVARGVIRMLRKNYG-----CVRVDFAQPFSLKEY 409
           +YD + +   + +    P     LW+ A  V+R L   +G     C RV  AQPFSL+EY
Sbjct: 331 TYDLVPDAPCDIDHASAPL---GLWTGALAVLRSLWSRWGCSHRICSRVHLAQPFSLQEY 387

Query: 410 LESQSQKPVSALLSLEQALLPAILP--SRPSDAADEGRDTSINESRNATDESLRRRLIAN 467
           + S ++       +LEQ L P +L   +   D   E   T I     A  E   + L+  
Sbjct: 388 IVS-ARSCWGGRQTLEQLLQPIVLGQCTAVPDTEKEQEWTPITGPLLALKEE-DQLLVRR 445

Query: 468 LAEHILFTASKSCAIMSTHIVACLLLYRHRQGIDLSTLVEDFFVMKEEVLARDFDLGFSG 527
           L+ H+L  +  S A+MST I+A LLL++H++      L+ +F  + EE+L R FD+GFSG
Sbjct: 446 LSCHVLSASVGSSAVMSTAIMATLLLFKHQK------LLGEFSWLTEEILLRGFDVGFSG 499

Query: 528 NSEDVVMHAIQLLGNCVTITHTSRNDEFFITPSTTVPSVFELNFYSNGVLHVFIMEAIIA 587
               ++ H++ LL   V +    R  +  + P    P +  L   S  +L VF+ EA+ A
Sbjct: 500 QLRSLLQHSLSLLRAHVALLRI-RQGDLLVVPQPG-PGLTHLAQLSAELLPVFLSEAVGA 557

Query: 588 CSLYAVLNKRGLGGPTSTPPN---------LISQEQLVRKAASLCYLLSNEGTISLPCQT 638
           C++  +L  R        PP          L+SQ +L R+   L +LL  +  +  PCQ+
Sbjct: 558 CAVRGLLAGR-------VPPQGPWELQGILLLSQNELYRQILLLMHLLPQDLLLLKPCQS 610

Query: 639 FYQVCHETVGKFIQYGILTVAEHDDQEDISPSLAEQQWDKKLPEPLSWR--SDEEDEDSD 696
            Y  C E + + IQ G+L VAE       +     Q+  +K    L W+   D  D DSD
Sbjct: 611 SYCYCQEVLDRLIQCGLL-VAEETPGSRPACDTGRQRLSRK----LLWKPSGDFTDSDSD 665

Query: 697 FGEEQRDCYLKVSQSKEHQQFITFLQRLLGPLLEAYSSAAIFVHNFSGPVPEPEYLQKLH 756
              E    Y ++SQ      F  FL RLL PLL+A++ AA F+     P  E  Y ++L 
Sbjct: 666 DFGEADGRYFRLSQQSHCPDFFLFLCRLLSPLLKAFAQAAAFLRQGQLPDTELGYTEQLF 725

Query: 757 KYLITRTERNVAVYAESATYCLVKNAVKMFKDIGVFKETKQKRVSVLELSSTFLPQCNRQ 816
           ++L   T +   ++ E A   L  +AV  F+D+GV ++T       L LS TF    N++
Sbjct: 726 QFL-QATAQEEGIF-ECADPKLAISAVWTFRDLGVLQQTPSPAGPRLHLSPTFASLDNQE 783

Query: 817 KLLEYILSFV 826
           KL ++I  F+
Sbjct: 784 KLEQFIRQFI 793


>gi|7657134 glyceronephosphate O-acyltransferase [Homo sapiens]
          Length = 680

 Score =  135 bits (340), Expect = 2e-31
 Identities = 125/471 (26%), Positives = 226/471 (47%), Gaps = 57/471 (12%)

Query: 132 NVLNSSRVQEAIAEVAAELNPDGSAQQQSKAVNKVKKKAKRILQEMVATVSPAMIRLTGW 191
           +VLNS  +   I +++ E           ++V+ ++++   IL EM   +    IR   +
Sbjct: 74  SVLNSEEIHYVIKQLSKE---------SLQSVDVLREEVSEILDEMSHKLRLGAIRFCAF 124

Query: 192 VLLKLFNSFFWNIQIHKGQLEMVKAATETNLPLLFLPVHRSHIDYLLLTFILFCHNIKAP 251
            L K+F   F  + +++  ++ ++ A + + P++ LP HRS+ID+L+L+F+L+ +++  P
Sbjct: 125 TLSKVFKQIFSKVCVNEEGIQKLQRAIQEH-PVVLLPSHRSYIDFLMLSFLLYNYDLPVP 183

Query: 252 YIASGNN-LNIPIFSTLIHKLGGFFIRRRLDETPDGRKDVLYRALLHGHIVELLRQQQF- 309
            IA+G + L + +   L+   G FF+RR    T  G K  LY A+   ++  +LR     
Sbjct: 184 VIAAGMDFLGMKMVGELLRMSGAFFMRR----TFGGNK--LYWAVFSEYVKTMLRNGYAP 237

Query: 310 LEIFLEGTRSRSGKTSCARAGLLSVVVDTLSTNVIPDILIIPVGISYDRIIEGH-YNGEQ 368
           +E FLEGTRSRS KT   + GLL++V++      + D  ++P+ ISYD+I+E   Y  E 
Sbjct: 238 VEFFLEGTRSRSAKTLTPKFGLLNIVMEPFFKREVFDTYLVPISISYDKILEETLYVYEL 297

Query: 369 LGKPKKNESLWSVARGVIRMLRKNYGCVRVDFAQPFSLKEYLESQSQKPVSALLSLEQAL 428
           LG PK  ES   + +   ++L +N+G + V F  P SL+     +  +           L
Sbjct: 298 LGVPKPKESTTGLLK-ARKILSENFGSIHVYFGDPVSLRSLAAGRMSRS-------SYNL 349

Query: 429 LPAILPSRPSDAADEGRDTSINESRNATDESLRRRLIANLAEHILFTASKSCAIMSTHIV 488
           +P  +P + S            E  +A    +  ++     E+++ +         T IV
Sbjct: 350 VPRYIPQKQS------------EDMHAFVTEVAYKMELLQIENMVLSP-------WTLIV 390

Query: 489 ACLLLYRHRQGIDLSTLVEDFFVMKEEVLARDFDLGFSGN--SEDVVMHAIQLLGNCVTI 546
           A LL  ++R  +D   LVE    +K    A    L +  N  +E+VV  +I L  N  ++
Sbjct: 391 AVLL--QNRPSMDFDALVEKTLWLKGLTQAFGGFLIWPDNKPAEEVVPASILLHSNIASL 448

Query: 547 TH-------TSRNDEFFITPSTTVPSVFELNFYSNGVLHVFIMEAIIACSL 590
                     S + E          ++   + Y N +L++F+  +++A +L
Sbjct: 449 VKDQVILKVDSGDSEVVDGLMLQHITLLMCSAYRNQLLNIFVRPSLVAVAL 499


>gi|239747810 PREDICTED: hypothetical protein LOC653924 [Homo
           sapiens]
          Length = 250

 Score =  101 bits (252), Expect = 2e-21
 Identities = 70/220 (31%), Positives = 110/220 (50%), Gaps = 4/220 (1%)

Query: 609 LISQEQLVRKAASLCYLLSNEGTISLPCQTFYQVCHETVGKFIQYGILTVAEHDDQEDIS 668
           L+SQ +L R+   L +LL  +  +  PCQ+ Y  C E + + IQ G+L   E   ++ + 
Sbjct: 31  LLSQNELYRQILLLMHLLPQDLLLLKPCQSSYCYCQEVLDRLIQCGLLVAEELVREQWLR 90

Query: 669 PSLAEQQWDKKLPEPLSWR--SDEEDEDSDFGEEQRDCYLKVSQSKEHQQFITFLQRLLG 726
              A     ++L   L W+   D  D DSD  +E    Y ++SQ      F  FL  LL 
Sbjct: 91  VRPACDTGQRRLSRKLLWKPSGDFTDSDSDDFKETEGQYSRLSQQSHCPDFFLFLCCLLS 150

Query: 727 PLLEAYSSAAIFVHNFSGPVPEPEYLQKLHKYLITRTERNVAVYAESATYCLVKNAVKMF 786
           PLL+A++ AA F+     P  E  Y  +L ++L   T +   ++ E A   L  +A+  F
Sbjct: 151 PLLKAFAQAAAFLRQGQLPDTESGYTDQLFQFL-QATAQEEGIF-ECADPKLAISAIWTF 208

Query: 787 KDIGVFKETKQKRVSVLELSSTFLPQCNRQKLLEYILSFV 826
           +D+GV ++T       L LS TF  Q N++KL ++I  F+
Sbjct: 209 RDLGVLQQTPSPAGPRLHLSPTFASQDNQEKLEQFIRQFI 248


>gi|239741682 PREDICTED: hypothetical protein LOC653924 [Homo
           sapiens]
          Length = 224

 Score = 76.3 bits (186), Expect = 1e-13
 Identities = 54/168 (32%), Positives = 82/168 (48%), Gaps = 14/168 (8%)

Query: 671 LAEQQW----------DKKLPEPLSWR--SDEEDEDSDFGEEQRDCYLKVSQSKEHQQFI 718
           L  +QW           ++L   L W+   D  D DSD  +E    Y ++SQ      F 
Sbjct: 57  LVREQWLRVRPACDTGQRRLSRKLLWKPSGDFTDSDSDDFKETEGQYSRLSQQSHCPDFF 116

Query: 719 TFLQRLLGPLLEAYSSAAIFVHNFSGPVPEPEYLQKLHKYLITRTERNVAVYAESATYCL 778
            FL RLL PLL+A++ AA F+     P  E  Y  +L ++L   T +   ++ E A   L
Sbjct: 117 LFLCRLLSPLLKAFAQAAAFLRQGQLPDTESGYTDQLFQFL-QATAQEEGIF-ECADPKL 174

Query: 779 VKNAVKMFKDIGVFKETKQKRVSVLELSSTFLPQCNRQKLLEYILSFV 826
             +A+  F+D+GV ++T       L LS TF  Q N++KL ++I  F+
Sbjct: 175 AISAIWTFRDLGVLQQTPSPAGPRLHLSPTFASQDNQEKLEQFIRQFI 222


>gi|239753233 PREDICTED: similar to hCG1732629 [Homo sapiens]
          Length = 224

 Score = 73.2 bits (178), Expect = 9e-13
 Identities = 53/168 (31%), Positives = 81/168 (48%), Gaps = 14/168 (8%)

Query: 671 LAEQQW----------DKKLPEPLSWR--SDEEDEDSDFGEEQRDCYLKVSQSKEHQQFI 718
           L  +QW           ++L   L W+   D  D DSD  +E    Y ++SQ      F 
Sbjct: 57  LVREQWLRVRPACDTGQRRLSRKLLWKPSGDFTDSDSDDFKETEGQYSRLSQQSHCPDFF 116

Query: 719 TFLQRLLGPLLEAYSSAAIFVHNFSGPVPEPEYLQKLHKYLITRTERNVAVYAESATYCL 778
            FL  LL PLL+A++ AA F+     P  E  Y  +L ++L   T +   ++ E A   L
Sbjct: 117 LFLCCLLSPLLKAFAQAAAFLRQGQLPDTESGYTDQLFQFL-QATAQEEGIF-ECADPKL 174

Query: 779 VKNAVKMFKDIGVFKETKQKRVSVLELSSTFLPQCNRQKLLEYILSFV 826
             +A+  F+D+GV ++T       L LS TF  Q N++KL ++I  F+
Sbjct: 175 AISAIWTFRDLGVLQQTPSPAGPRLHLSPTFASQDNQEKLEQFIRQFI 222


>gi|113205087 DENN/MADD domain containing 1C [Homo sapiens]
          Length = 801

 Score = 34.7 bits (78), Expect = 0.37
 Identities = 27/66 (40%), Positives = 33/66 (50%), Gaps = 8/66 (12%)

Query: 440 AADEGRDTSINESRN-------ATDESLRRRLIANLAEH-ILFTASKSCAIMSTHIVACL 491
           A D GR  SI E+RN        TDE++     A LAE  +L TASK   + S    +C 
Sbjct: 177 APDSGRLPSIPENRNLTELVVAVTDENIVGLFAALLAERRVLLTASKLSTLTSCVHASCA 236

Query: 492 LLYRHR 497
           LLY  R
Sbjct: 237 LLYPMR 242


>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2
            [Homo sapiens]
          Length = 8749

 Score = 33.9 bits (76), Expect = 0.64
 Identities = 25/103 (24%), Positives = 45/103 (43%)

Query: 613  EQLVRKAASLCYLLSNEGTISLPCQTFYQVCHETVGKFIQYGILTVAEHDDQEDISPSLA 672
            +QL R+  S+    S     +LP +   ++ H   G     GI+        ED++P L 
Sbjct: 4717 QQLERQLKSVKEEQSKVNEETLPAEEKLKMYHSLAGSLQDSGIVLKRVTIHLEDLAPHLD 4776

Query: 673  EQQWDKKLPEPLSWRSDEEDEDSDFGEEQRDCYLKVSQSKEHQ 715
               ++K   +  SW+ + +   S  GE   +C  ++ QS + Q
Sbjct: 4777 PLAYEKARHQIQSWQGELKLLTSAIGETVTECESRMVQSIDFQ 4819


>gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1
            [Homo sapiens]
          Length = 8797

 Score = 33.9 bits (76), Expect = 0.64
 Identities = 25/103 (24%), Positives = 45/103 (43%)

Query: 613  EQLVRKAASLCYLLSNEGTISLPCQTFYQVCHETVGKFIQYGILTVAEHDDQEDISPSLA 672
            +QL R+  S+    S     +LP +   ++ H   G     GI+        ED++P L 
Sbjct: 4788 QQLERQLKSVKEEQSKVNEETLPAEEKLKMYHSLAGSLQDSGIVLKRVTIHLEDLAPHLD 4847

Query: 673  EQQWDKKLPEPLSWRSDEEDEDSDFGEEQRDCYLKVSQSKEHQ 715
               ++K   +  SW+ + +   S  GE   +C  ++ QS + Q
Sbjct: 4848 PLAYEKARHQIQSWQGELKLLTSAIGETVTECESRMVQSIDFQ 4890


>gi|110349786 Alstrom syndrome 1 [Homo sapiens]
          Length = 4169

 Score = 33.1 bits (74), Expect = 1.1
 Identities = 17/47 (36%), Positives = 21/47 (44%)

Query: 643  CHETVGKFIQYGILTVAEHDDQEDISPSLAEQQWDKKLPEPLSWRSD 689
            C  T+G  I   ++TV + D   D S       WD  LPE L   SD
Sbjct: 2396 CSGTIGNKIIIPMMTVIKSDSSSDASDGNGSCSWDSNLPESLESVSD 2442


>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
          Length = 3230

 Score = 32.7 bits (73), Expect = 1.4
 Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 2/43 (4%)

Query: 660 EHDDQEDISPSLAEQQWDKKLPEPLSWRS--DEEDEDSDFGEE 700
           EH ++E+ S S A ++ + +  E    +S  DEE+ED DFG E
Sbjct: 510 EHSEEEETSGSSASEESESEESEDAQSQSQADEEEEDDDFGVE 552


>gi|42718011 cyclic nucleotide gated channel alpha 2 [Homo sapiens]
          Length = 664

 Score = 32.7 bits (73), Expect = 1.4
 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 5/70 (7%)

Query: 546 ITHTSRNDEFF--ITPSTTVPSVFELNFYSNGVLHVFIMEAIIACSLYAVLNKRGLGGPT 603
           + H +R  EFF      T  P++F +   SN VL++ ++    AC  YA+    G G  T
Sbjct: 250 LLHFARMFEFFDRTETRTNYPNIFRI---SNLVLYILVIIHWNACIYYAISKSIGFGVDT 306

Query: 604 STPPNLISQE 613
              PN+   E
Sbjct: 307 WVYPNITDPE 316


>gi|114155133 dynein, axonemal, heavy chain 9 isoform 2 [Homo sapiens]
          Length = 4486

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 23/69 (33%), Positives = 34/69 (49%)

Query: 291  LYRALLHGHIVELLRQQQFLEIFLEGTRSRSGKTSCARAGLLSVVVDTLSTNVIPDILII 350
            LY++LLH H  EL  + + LE  L    S S +    +A L +  V+    N   D LI 
Sbjct: 3050 LYQSLLHRHRKELKCKTERLENGLLKLHSTSAQVDDLKAKLAAQEVELKQKNEDADKLIQ 3109

Query: 351  PVGISYDRI 359
             VG+  D++
Sbjct: 3110 VVGVETDKV 3118


>gi|4757900 calreticulin precursor [Homo sapiens]
          Length = 417

 Score = 32.0 bits (71), Expect = 2.4
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 2/53 (3%)

Query: 653 YGILTVAEHD--DQEDISPSLAEQQWDKKLPEPLSWRSDEEDEDSDFGEEQRD 703
           +G+   AE    D++D    L E++ DKK  E       E+DED D  EE  +
Sbjct: 347 WGVTKAAEKQMKDKQDEEQRLKEEEEDKKRKEEEEAEDKEDDEDKDEDEEDEE 399


>gi|214010183 amyloid beta (A4) precursor-like protein 2 isoform 3
           [Homo sapiens]
          Length = 695

 Score = 31.6 bits (70), Expect = 3.2
 Identities = 37/171 (21%), Positives = 68/171 (39%), Gaps = 18/171 (10%)

Query: 660 EHDDQEDISPSLAEQQWDKKLPEPLSWRSDEEDEDSDFGE---EQRDCYLKVSQSKEHQQ 716
           E D++ED     +E   +  L +      DE+DED + GE   E RD Y    +  ++ +
Sbjct: 226 EEDEEEDYDVYKSEFPTEADLEDFTEAAVDEDDEDEEEGEEVVEDRDYYYDTFKGDDYNE 285

Query: 717 FITFLQRLLGPLLEAYSSAAIFVHNFSGPVPEPEYLQKLHKYLITRTERNV-AVYAESAT 775
                +    P  +   S     H+   P P P     +  Y  T  + N  A + ++  
Sbjct: 286 -----ENPTEPGSDGTMSDKEITHDVKVP-PTPLPTNDVDVYFETSADDNEHARFQKAKE 339

Query: 776 YCLVKNAVKMFKDIGVFKETKQKRVSVLELSSTFLPQCNRQKLLEYILSFV 826
              +++  +M        +  +K     EL +  LP+  RQ L+++  + V
Sbjct: 340 QLEIRHRNRM--------DRVKKEWEEAELQAKNLPKAERQTLIQHFQAMV 382


>gi|40556389 zona pellucida binding protein 2 isoform 2 [Homo
           sapiens]
          Length = 338

 Score = 31.2 bits (69), Expect = 4.1
 Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 12/91 (13%)

Query: 733 SSAAIFVHNFSGPVPEPEYLQKLHKYLITRTE-------RNVAVYAESATYCLVKNAVKM 785
           S A IF HNF+  +P   ++   H   + R +       +N  +++  A+ C+V +    
Sbjct: 247 SQAYIFYHNFNKTLPAMHFVD--HSLQVVRLDSCRPGFGKNERLHSNCASCCVVCSPATF 304

Query: 786 FKDIGVFKETKQKRVSVLELSSTFLPQCNRQ 816
             D+ V   T Q  VSVL   +   PQ + +
Sbjct: 305 SPDVNV---TCQTCVSVLTYGAKSCPQTSNK 332


>gi|84875535 zona pellucida binding protein 2 isoform 1 [Homo
           sapiens]
          Length = 316

 Score = 31.2 bits (69), Expect = 4.1
 Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 12/91 (13%)

Query: 733 SSAAIFVHNFSGPVPEPEYLQKLHKYLITRTE-------RNVAVYAESATYCLVKNAVKM 785
           S A IF HNF+  +P   ++   H   + R +       +N  +++  A+ C+V +    
Sbjct: 225 SQAYIFYHNFNKTLPAMHFVD--HSLQVVRLDSCRPGFGKNERLHSNCASCCVVCSPATF 282

Query: 786 FKDIGVFKETKQKRVSVLELSSTFLPQCNRQ 816
             D+ V   T Q  VSVL   +   PQ + +
Sbjct: 283 SPDVNV---TCQTCVSVLTYGAKSCPQTSNK 310


>gi|70608109 integrator complex subunit 8 [Homo sapiens]
          Length = 995

 Score = 30.8 bits (68), Expect = 5.4
 Identities = 26/127 (20%), Positives = 54/127 (42%), Gaps = 20/127 (15%)

Query: 567 FELNFYSNGVLHVFIMEAIIACSLYAVLNKRGLGGPTSTPPNLISQEQLVRKAASLCYLL 626
           F  N YS   LH ++    +    +   NK       + PP++ + +Q++++    C LL
Sbjct: 844 FATNQYS-AALHYYLQAGAVCSDFF---NK-------AVPPDVYT-DQVIKRMIKCCSLL 891

Query: 627 SNEGTISLPCQTFYQVCHETVGKFIQYGILTVAEHDDQEDISPSLAEQQWDKKLPEPLSW 686
           +    +++ CQ   ++ ++T  K +Q          +  D   S  +  WD  + E L++
Sbjct: 892 NCHTQVAILCQFLREIDYKTAFKSLQ--------EQNSHDAMDSYYDYIWDVTILEYLTY 943

Query: 687 RSDEEDE 693
              +  E
Sbjct: 944 LHHKRGE 950


>gi|59806361 hypothetical protein LOC387104 [Homo sapiens]
          Length = 947

 Score = 30.4 bits (67), Expect = 7.0
 Identities = 14/42 (33%), Positives = 25/42 (59%)

Query: 142 AIAEVAAELNPDGSAQQQSKAVNKVKKKAKRILQEMVATVSP 183
           A A   A L+P+GS+++Q +A +  + +   + Q + AT SP
Sbjct: 19  AAAATEARLHPEGSSRKQQRAQSPARPRDSSLRQTIAATRSP 60


>gi|194097487 RAN binding protein 3 isoform RANBP3-a [Homo sapiens]
          Length = 562

 Score = 30.4 bits (67), Expect = 7.0
 Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 6/62 (9%)

Query: 402 QPFSLKEYLESQSQKPVSALLSLEQALLPAILPSR-----PSDAADEGRDTSINESRNAT 456
           QP +L + + S     VS       A+ PA  P       PS+AADE ++   NES NA+
Sbjct: 181 QPKALSQTVPSSGTNGVSLPADCTGAV-PAASPDTAAWRSPSEAADEEKEPQKNESSNAS 239

Query: 457 DE 458
           +E
Sbjct: 240 EE 241


>gi|105990532 apolipoprotein B precursor [Homo sapiens]
          Length = 4563

 Score = 30.0 bits (66), Expect = 9.2
 Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 4/55 (7%)

Query: 267  LIHKLGGFFIRRRLDETPDGRKDVLYRALLHGHI--VELLRQQQFLEIFLEGTRS 319
            LI KL  F   + +DET D  ++V  R  L+G I  +EL ++ + L++FLE T++
Sbjct: 2423 LIKKLKSFDYHQFVDETNDKIREVTQR--LNGEIQALELPQKAEALKLFLEETKA 2475


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.136    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,421,099
Number of Sequences: 37866
Number of extensions: 1339351
Number of successful extensions: 4076
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 4032
Number of HSP's gapped (non-prelim): 35
length of query: 828
length of database: 18,247,518
effective HSP length: 111
effective length of query: 717
effective length of database: 14,044,392
effective search space: 10069829064
effective search space used: 10069829064
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.