Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: GNPAT Sequence: fasta or formatted (680aa) NCBI GI: 7657134
Description:

glyceronephosphate O-acyltransferase

Referenced in:

Lipid Metabolism
Peroxisomes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         35           2
 C cysteine            2.1         14           1
 D aspartate           4.3         29           1
 E glutamate           7.6         52           3
 F phenylalanine       5.9         40           2
 G glycine             4.7         32           2
 H histidine           1.5         10           1
 I isoleucine          5.3         36           2
 K lysine              7.2         49           3
 L leucine            12.5         85           2
 M methionine          2.9         20           1
 N asparagine          3.4         23           3
 P proline             4.4         30           1
 Q glutamine           3.2         22           1
 R arginine            4.0         27           2
 S serine              8.2         56           5
 T threonine           4.4         30           2
 V valine              8.7         59           2
 W tryptophan          0.7          5           1
 Y tyrosine            3.8         26           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glyceronephosphate O-acyltransferase 
GPAM                  0.083   mitochondrial glycerol 3-phosphate acyltransferase ...
GPAT2                 0.019   glycerol-3-phosphate acyltransferase 2, mitochondri...
GNL3                  0.005   guanine nucleotide binding protein-like 3 isoform 2 ...
GNL3                  0.005   guanine nucleotide binding protein-like 3 isoform 2 ...
GNL3                  0.005   guanine nucleotide binding protein-like 3 isoform 1 ...
LRSAM1                0.004   leucine rich repeat and sterile alpha motif containi...
LRSAM1                0.004   leucine rich repeat and sterile alpha motif containi...
LRSAM1                0.004   leucine rich repeat and sterile alpha motif containi...
UBR1                  0.004   ubiquitin protein ligase E3 component n-recognin 1 [...
DDX3X                 0.004   DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3 [Homo...
DDX3Y                 0.004   DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked ...
DDX3Y                 0.004   DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press