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Search of human proteins with 190358490
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|190358490 hypothetical protein LOC51313 isoform 1 [Homo
sapiens]
(527 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|190358490 hypothetical protein LOC51313 isoform 1 [Homo sapiens] 1076 0.0
gi|190358493 hypothetical protein LOC51313 isoform 2 [Homo sapiens] 992 0.0
gi|32526911 hypothetical protein LOC51313 isoform 2 [Homo sapiens] 992 0.0
gi|207113133 hypothetical protein LOC729085 [Homo sapiens] 227 2e-59
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 35 0.13
gi|239754599 PREDICTED: hypothetical protein [Homo sapiens] 34 0.29
gi|168229150 poly(A) binding protein, cytoplasmic 4-like [Homo s... 34 0.38
gi|146219832 myosin light chain kinase 3 [Homo sapiens] 33 0.64
gi|112799849 tumor protein p53 binding protein, 2 isoform 1 [Hom... 33 0.84
gi|4885643 tumor protein p53 binding protein, 2 isoform 2 [Homo ... 33 0.84
gi|4502175 apical protein of Xenopus-like [Homo sapiens] 32 1.1
gi|27881484 zinc finger CCCH-type containing 7B [Homo sapiens] 32 1.4
gi|113416229 PREDICTED: hypothetical protein [Homo sapiens] 32 1.9
gi|41281612 zinc finger protein 828 [Homo sapiens] 32 1.9
gi|169216516 PREDICTED: similar to paraneoplastic antigen MA1 [H... 31 2.4
gi|241896898 family with sequence similarity 20, member A [Homo ... 31 3.2
gi|83921602 solute carrier family 38, member 10 isoform a [Homo ... 31 3.2
gi|169658367 BAH domain and coiled-coil containing 1 [Homo sapiens] 31 3.2
gi|148833506 obscurin, cytoskeletal calmodulin and titin-interac... 30 4.2
gi|239744995 PREDICTED: hypothetical protein XP_002343325 [Homo ... 30 4.2
gi|116174742 family with sequence similarity 20, member C [Homo ... 30 4.2
gi|150170729 microtubule associated serine/threonine kinase 3 [H... 30 4.2
gi|17998698 GATA binding protein 5 [Homo sapiens] 30 4.2
gi|153070260 myristoylated alanine-rich protein kinase C substra... 30 5.4
gi|116256471 SNF1-like kinase [Homo sapiens] 30 5.4
gi|239758117 PREDICTED: hypothetical protein [Homo sapiens] 30 7.1
gi|239748132 PREDICTED: hypothetical protein XP_002346560 [Homo ... 30 7.1
gi|239743055 PREDICTED: hypothetical protein XP_002342730 [Homo ... 30 7.1
gi|58331230 DALR anticodon binding domain containing 3 isoform 1... 30 7.1
gi|222418771 glycerate kinase isoform 2 [Homo sapiens] 29 9.3
>gi|190358490 hypothetical protein LOC51313 isoform 1 [Homo sapiens]
Length = 527
Score = 1076 bits (2783), Expect = 0.0
Identities = 527/527 (100%), Positives = 527/527 (100%)
Query: 1 MTCPDKPGQLINWFICSLCVPRVRKLWSSRRPRTRRNLLLGTACAIYLGFLVSQVGRASL 60
MTCPDKPGQLINWFICSLCVPRVRKLWSSRRPRTRRNLLLGTACAIYLGFLVSQVGRASL
Sbjct: 1 MTCPDKPGQLINWFICSLCVPRVRKLWSSRRPRTRRNLLLGTACAIYLGFLVSQVGRASL 60
Query: 61 QHGQAAEKGPHRSRDTAEPSFPEIPLDGTLAPPESQGNGSTLQPNVVYITLRSKRSKPAN 120
QHGQAAEKGPHRSRDTAEPSFPEIPLDGTLAPPESQGNGSTLQPNVVYITLRSKRSKPAN
Sbjct: 61 QHGQAAEKGPHRSRDTAEPSFPEIPLDGTLAPPESQGNGSTLQPNVVYITLRSKRSKPAN 120
Query: 121 IRGTVKPKRRKKHAVASAAPGQEALVGPSLQPQEAAREADAVAPGYAQGANLVKIGERPW 180
IRGTVKPKRRKKHAVASAAPGQEALVGPSLQPQEAAREADAVAPGYAQGANLVKIGERPW
Sbjct: 121 IRGTVKPKRRKKHAVASAAPGQEALVGPSLQPQEAAREADAVAPGYAQGANLVKIGERPW 180
Query: 181 RLVRGPGVRAGGPDFLQPSSRESNIRIYSESAPSWLSKDDIRRMRLLADSAVAGLRPVSS 240
RLVRGPGVRAGGPDFLQPSSRESNIRIYSESAPSWLSKDDIRRMRLLADSAVAGLRPVSS
Sbjct: 181 RLVRGPGVRAGGPDFLQPSSRESNIRIYSESAPSWLSKDDIRRMRLLADSAVAGLRPVSS 240
Query: 241 RSGARLLVLEGGAPGAVLRCGPSPCGLLKQPLDMSEVFAFHLDRILGLNRTLPSVSRKAE 300
RSGARLLVLEGGAPGAVLRCGPSPCGLLKQPLDMSEVFAFHLDRILGLNRTLPSVSRKAE
Sbjct: 241 RSGARLLVLEGGAPGAVLRCGPSPCGLLKQPLDMSEVFAFHLDRILGLNRTLPSVSRKAE 300
Query: 301 FIQAAAAACLSMRLAFFIFPAWEDMRVPGKCCIGHARLTWGTYQQLLKQKCWQNGRVPKP 360
FIQAAAAACLSMRLAFFIFPAWEDMRVPGKCCIGHARLTWGTYQQLLKQKCWQNGRVPKP
Sbjct: 301 FIQAAAAACLSMRLAFFIFPAWEDMRVPGKCCIGHARLTWGTYQQLLKQKCWQNGRVPKP 360
Query: 361 ESGCTEIHHHEWSKMALFDFLLQIYNRLDTNCCGFRPRKEDACVQNGLRPKCDDQGSAAL 420
ESGCTEIHHHEWSKMALFDFLLQIYNRLDTNCCGFRPRKEDACVQNGLRPKCDDQGSAAL
Sbjct: 361 ESGCTEIHHHEWSKMALFDFLLQIYNRLDTNCCGFRPRKEDACVQNGLRPKCDDQGSAAL 420
Query: 421 AHIIQRKHDPRHLVFIDNKGFFDRSEDNLNFKLLEGIKEFPASAVSVLKSQHLRQKLLQS 480
AHIIQRKHDPRHLVFIDNKGFFDRSEDNLNFKLLEGIKEFPASAVSVLKSQHLRQKLLQS
Sbjct: 421 AHIIQRKHDPRHLVFIDNKGFFDRSEDNLNFKLLEGIKEFPASAVSVLKSQHLRQKLLQS 480
Query: 481 LFLDKVYWESQGGRQGIEKLIDVIEHRAKILITYINAHGVKVLPMNE 527
LFLDKVYWESQGGRQGIEKLIDVIEHRAKILITYINAHGVKVLPMNE
Sbjct: 481 LFLDKVYWESQGGRQGIEKLIDVIEHRAKILITYINAHGVKVLPMNE 527
>gi|190358493 hypothetical protein LOC51313 isoform 2 [Homo sapiens]
Length = 519
Score = 992 bits (2564), Expect = 0.0
Identities = 494/528 (93%), Positives = 499/528 (94%), Gaps = 10/528 (1%)
Query: 1 MTCPDKPGQLINWFICSLCVPRVRKLWSSRRPRTRRNLLLGTACAIYLGFLVSQVGRASL 60
MTCPDKPGQLINWFICSLCVPRVRKLWSSRRPRTRRNLLLGTACAIYLGFLVSQVGRASL
Sbjct: 1 MTCPDKPGQLINWFICSLCVPRVRKLWSSRRPRTRRNLLLGTACAIYLGFLVSQVGRASL 60
Query: 61 QHGQAAEKGPHRSRDTAEPSFPEIPLDGTLAPPESQGNGSTLQPNVVYITLRSKRSKPAN 120
QHGQAAEKGPHRSRDTAEPSFPEIPLDGTLAPPESQGNGSTLQPNVVYITLRSKRSKPAN
Sbjct: 61 QHGQAAEKGPHRSRDTAEPSFPEIPLDGTLAPPESQGNGSTLQPNVVYITLRSKRSKPAN 120
Query: 121 IRGTVKPKRRKKHAVASAAPGQEALVGPSLQPQEAAREADAVAPGYAQGANLVKIGERPW 180
IRGTVKPKRRKKHAVASAAPGQEALVGPSLQPQEAAREADAVAPGYAQGANLVKIGERPW
Sbjct: 121 IRGTVKPKRRKKHAVASAAPGQEALVGPSLQPQEAAREADAVAPGYAQGANLVKIGERPW 180
Query: 181 RLVRGPGVRAGGPDFLQPSSRESNIRIYSESAPSWLSKDDIRRMRLLADSAVAGLRPVSS 240
RLVRGPGVRAGGPDFLQPSSRESNIRIYSESAPSWLSKDDIRRMRLLADSAVAGLRPVSS
Sbjct: 181 RLVRGPGVRAGGPDFLQPSSRESNIRIYSESAPSWLSKDDIRRMRLLADSAVAGLRPVSS 240
Query: 241 RSGARLLVLEGGAPGAVLRCGPSPCGLLKQPLDMSEVFAFHLDRILGLNRTLPSVSRKAE 300
RSGARLLVLEGGAPGAVLRCGPSPCGLLKQPLDMSEVFAFHLDRILGLNRTLPSVSRKAE
Sbjct: 241 RSGARLLVLEGGAPGAVLRCGPSPCGLLKQPLDMSEVFAFHLDRILGLNRTLPSVSRKAE 300
Query: 301 FIQAAAAACLSMRLAFFIFPAWE-DMRVPGKCCIGHARLTWGTYQQLLKQKCWQNGRVPK 359
FIQ + + W+ + +LTWGTYQQLLKQKCWQNGRVPK
Sbjct: 301 FIQDGRPCPIIL---------WDASLSSASNDTHSSVKLTWGTYQQLLKQKCWQNGRVPK 351
Query: 360 PESGCTEIHHHEWSKMALFDFLLQIYNRLDTNCCGFRPRKEDACVQNGLRPKCDDQGSAA 419
PESGCTEIHHHEWSKMALFDFLLQIYNRLDTNCCGFRPRKEDACVQNGLRPKCDDQGSAA
Sbjct: 352 PESGCTEIHHHEWSKMALFDFLLQIYNRLDTNCCGFRPRKEDACVQNGLRPKCDDQGSAA 411
Query: 420 LAHIIQRKHDPRHLVFIDNKGFFDRSEDNLNFKLLEGIKEFPASAVSVLKSQHLRQKLLQ 479
LAHIIQRKHDPRHLVFIDNKGFFDRSEDNLNFKLLEGIKEFPASAVSVLKSQHLRQKLLQ
Sbjct: 412 LAHIIQRKHDPRHLVFIDNKGFFDRSEDNLNFKLLEGIKEFPASAVSVLKSQHLRQKLLQ 471
Query: 480 SLFLDKVYWESQGGRQGIEKLIDVIEHRAKILITYINAHGVKVLPMNE 527
SLFLDKVYWESQGGRQGIEKLIDVIEHRAKILITYINAHGVKVLPMNE
Sbjct: 472 SLFLDKVYWESQGGRQGIEKLIDVIEHRAKILITYINAHGVKVLPMNE 519
>gi|32526911 hypothetical protein LOC51313 isoform 2 [Homo sapiens]
Length = 519
Score = 992 bits (2564), Expect = 0.0
Identities = 494/528 (93%), Positives = 499/528 (94%), Gaps = 10/528 (1%)
Query: 1 MTCPDKPGQLINWFICSLCVPRVRKLWSSRRPRTRRNLLLGTACAIYLGFLVSQVGRASL 60
MTCPDKPGQLINWFICSLCVPRVRKLWSSRRPRTRRNLLLGTACAIYLGFLVSQVGRASL
Sbjct: 1 MTCPDKPGQLINWFICSLCVPRVRKLWSSRRPRTRRNLLLGTACAIYLGFLVSQVGRASL 60
Query: 61 QHGQAAEKGPHRSRDTAEPSFPEIPLDGTLAPPESQGNGSTLQPNVVYITLRSKRSKPAN 120
QHGQAAEKGPHRSRDTAEPSFPEIPLDGTLAPPESQGNGSTLQPNVVYITLRSKRSKPAN
Sbjct: 61 QHGQAAEKGPHRSRDTAEPSFPEIPLDGTLAPPESQGNGSTLQPNVVYITLRSKRSKPAN 120
Query: 121 IRGTVKPKRRKKHAVASAAPGQEALVGPSLQPQEAAREADAVAPGYAQGANLVKIGERPW 180
IRGTVKPKRRKKHAVASAAPGQEALVGPSLQPQEAAREADAVAPGYAQGANLVKIGERPW
Sbjct: 121 IRGTVKPKRRKKHAVASAAPGQEALVGPSLQPQEAAREADAVAPGYAQGANLVKIGERPW 180
Query: 181 RLVRGPGVRAGGPDFLQPSSRESNIRIYSESAPSWLSKDDIRRMRLLADSAVAGLRPVSS 240
RLVRGPGVRAGGPDFLQPSSRESNIRIYSESAPSWLSKDDIRRMRLLADSAVAGLRPVSS
Sbjct: 181 RLVRGPGVRAGGPDFLQPSSRESNIRIYSESAPSWLSKDDIRRMRLLADSAVAGLRPVSS 240
Query: 241 RSGARLLVLEGGAPGAVLRCGPSPCGLLKQPLDMSEVFAFHLDRILGLNRTLPSVSRKAE 300
RSGARLLVLEGGAPGAVLRCGPSPCGLLKQPLDMSEVFAFHLDRILGLNRTLPSVSRKAE
Sbjct: 241 RSGARLLVLEGGAPGAVLRCGPSPCGLLKQPLDMSEVFAFHLDRILGLNRTLPSVSRKAE 300
Query: 301 FIQAAAAACLSMRLAFFIFPAWE-DMRVPGKCCIGHARLTWGTYQQLLKQKCWQNGRVPK 359
FIQ + + W+ + +LTWGTYQQLLKQKCWQNGRVPK
Sbjct: 301 FIQDGRPCPIIL---------WDASLSSASNDTHSSVKLTWGTYQQLLKQKCWQNGRVPK 351
Query: 360 PESGCTEIHHHEWSKMALFDFLLQIYNRLDTNCCGFRPRKEDACVQNGLRPKCDDQGSAA 419
PESGCTEIHHHEWSKMALFDFLLQIYNRLDTNCCGFRPRKEDACVQNGLRPKCDDQGSAA
Sbjct: 352 PESGCTEIHHHEWSKMALFDFLLQIYNRLDTNCCGFRPRKEDACVQNGLRPKCDDQGSAA 411
Query: 420 LAHIIQRKHDPRHLVFIDNKGFFDRSEDNLNFKLLEGIKEFPASAVSVLKSQHLRQKLLQ 479
LAHIIQRKHDPRHLVFIDNKGFFDRSEDNLNFKLLEGIKEFPASAVSVLKSQHLRQKLLQ
Sbjct: 412 LAHIIQRKHDPRHLVFIDNKGFFDRSEDNLNFKLLEGIKEFPASAVSVLKSQHLRQKLLQ 471
Query: 480 SLFLDKVYWESQGGRQGIEKLIDVIEHRAKILITYINAHGVKVLPMNE 527
SLFLDKVYWESQGGRQGIEKLIDVIEHRAKILITYINAHGVKVLPMNE
Sbjct: 472 SLFLDKVYWESQGGRQGIEKLIDVIEHRAKILITYINAHGVKVLPMNE 519
>gi|207113133 hypothetical protein LOC729085 [Homo sapiens]
Length = 575
Score = 227 bits (578), Expect = 2e-59
Identities = 126/317 (39%), Positives = 176/317 (55%), Gaps = 14/317 (4%)
Query: 212 APSWLSKDDIRRMRLLADSAVAGLRPVSSRS-------GARLLVLEGGAPGAVLRCGPSP 264
AP WL+ D++ +RLLA V V + + + +P C
Sbjct: 257 APPWLTDHDVQMLRLLAQGEVVDKARVPAHGQVLQVGFSTEAALQDLSSPRLSQLCSQGL 316
Query: 265 CGLLKQPLDMSEVFAFHLDRILGLNRTLPSVSRKAEF-IQAAAAACLSMRLAFFIFPAWE 323
CGL+K+P D+ EV +FH+DR+LGL R+LP+V+R+ + R + P +
Sbjct: 317 CGLIKRPGDLPEVLSFHVDRVLGLRRSLPAVARRFHSPLLPYRYTDGGARPVIWWAPDVQ 376
Query: 324 DMRVPGKCCIGHARLTWGTYQQLLKQKCWQNGRVPKPESGCTEIHHHEWSKMALFDFLLQ 383
+ P + A L W YQ LL C G+ P C IHH EW+++ALFDFLLQ
Sbjct: 377 HLSDPDEDQNSLA-LGWLQYQALLAHSCNWPGQAP-----CPGIHHTEWARLALFDFLLQ 430
Query: 384 IYNRLDTNCCGFRPRKEDACVQNGLRPKCDDQGSAALAHIIQRKHDPRHLVFIDNKGFFD 443
+++RLD CCGF P D CV+ LR KC + L HI+ R DP HLV+IDN G
Sbjct: 431 VHDRLDRYCCGFEPEPSDPCVEERLREKCQNPAELRLVHILVRSSDPSHLVYIDNAGNLQ 490
Query: 444 RSEDNLNFKLLEGIKEFPASAVSVLKSQHLRQKLLQSLFLDKVYWESQGGRQGIEKLIDV 503
ED LNF+LLEGI FP SAV VL S L+ LL+SL +D V+WESQGG QG+++++
Sbjct: 491 HPEDKLNFRLLEGIDGFPESAVKVLASGCLQNMLLKSLQMDPVFWESQGGAQGLKQVLQT 550
Query: 504 IEHRAKILITYINAHGV 520
+E R ++L+ +I H +
Sbjct: 551 LEQRGQVLLGHIQKHNL 567
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 35.4 bits (80), Expect = 0.13
Identities = 36/122 (29%), Positives = 50/122 (40%), Gaps = 20/122 (16%)
Query: 51 LVSQVGRASLQHGQAAEKGPHRSRDTAEPSFPEIPLDGTLAPPESQGNGSTLQPNVVYIT 110
LV QVGR + GPHRS ++P GT E+Q S P ++
Sbjct: 806 LVLQVGRP-----EQGAVGPHRSHCCSQP--------GTQPAQEAQRGPS---PEASWLC 849
Query: 111 LRSKRSKPANIRGTVKPKRRKKHAVASAAPGQEALVGPSLQPQEAARE-ADAVAPGYAQG 169
R + P RG P+RR ++ + Q GP PQE R+ +PG G
Sbjct: 850 GRYCPTPP---RGRPCPQRRSSSCGSTGSSHQSTARGPGGSPQEGTRQPGPTPSPGPNSG 906
Query: 170 AN 171
A+
Sbjct: 907 AS 908
>gi|239754599 PREDICTED: hypothetical protein [Homo sapiens]
Length = 294
Score = 34.3 bits (77), Expect = 0.29
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 113 SKRSKPANIRGTVKPKRRKKHAVASAAPGQEALVGPSLQPQEAA 156
+K+ + A GT P+RR++ A +A GQ+A G SL P A
Sbjct: 202 AKKPQKAAAAGTKTPRRRRQKAAKAAVWGQKAAAGESLTPNSLA 245
>gi|168229150 poly(A) binding protein, cytoplasmic 4-like [Homo
sapiens]
Length = 370
Score = 33.9 bits (76), Expect = 0.38
Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 17/101 (16%)
Query: 413 DDQGSAALAHIIQRKHDPRHLVFIDNKGFFDRSEDNLNFKLLEGIKEFPASAVSVLKSQH 472
DDQGS A V N+ DR+ + +N KLL+G K F V K++
Sbjct: 132 DDQGSKGYA-----------FVHFQNQSAADRAIEEMNGKLLKGCKVF----VGRFKNRK 176
Query: 473 LRQKLLQSLFLD--KVYWESQGGRQGIEKLIDVIEHRAKIL 511
R+ L+S + VY ++ GG E+L DV K L
Sbjct: 177 DREAELRSKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTL 217
>gi|146219832 myosin light chain kinase 3 [Homo sapiens]
Length = 819
Score = 33.1 bits (74), Expect = 0.64
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 14/70 (20%)
Query: 139 APGQEALVGPSLQPQEAAREADAVAPGYAQGANLVKIGERPW----RLVRGPGVRAGGPD 194
APG+ +V PSL+ VAPG QGA+ + P RL GPG + GP
Sbjct: 267 APGRVNVVSPSLE----------VAPGAGQGASSSRPDPEPLEEGTRLTPGPGPQCPGPP 316
Query: 195 FLQPSSRESN 204
L +R ++
Sbjct: 317 GLPAQARATH 326
>gi|112799849 tumor protein p53 binding protein, 2 isoform 1 [Homo
sapiens]
Length = 1134
Score = 32.7 bits (73), Expect = 0.84
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 11/85 (12%)
Query: 111 LRSKRSKPANIRGTVKPKRRKKHAVASAAPGQEALVGPSLQ----PQEAAREADAVAPGY 166
L+ K + P + G + + A++AP + A VGP +Q P+ +R V P
Sbjct: 325 LQQKENLPVSSDGNLPQQ-------AASAPSRVAAVGPYIQSSTMPRMPSRPELLVKPAL 377
Query: 167 AQGANLVKIGERPWRLVRGPGVRAG 191
G+ +++ E P ++ P +R+G
Sbjct: 378 PDGSLVIQASEGPMKIQTLPNMRSG 402
>gi|4885643 tumor protein p53 binding protein, 2 isoform 2 [Homo
sapiens]
Length = 1005
Score = 32.7 bits (73), Expect = 0.84
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 11/85 (12%)
Query: 111 LRSKRSKPANIRGTVKPKRRKKHAVASAAPGQEALVGPSLQ----PQEAAREADAVAPGY 166
L+ K + P + G + + A++AP + A VGP +Q P+ +R V P
Sbjct: 196 LQQKENLPVSSDGNLPQQ-------AASAPSRVAAVGPYIQSSTMPRMPSRPELLVKPAL 248
Query: 167 AQGANLVKIGERPWRLVRGPGVRAG 191
G+ +++ E P ++ P +R+G
Sbjct: 249 PDGSLVIQASEGPMKIQTLPNMRSG 273
>gi|4502175 apical protein of Xenopus-like [Homo sapiens]
Length = 1616
Score = 32.3 bits (72), Expect = 1.1
Identities = 44/177 (24%), Positives = 63/177 (35%), Gaps = 23/177 (12%)
Query: 70 PHRSRDTAEPSFPEIPLDGTLAPPESQGNGSTLQPNVVYITLRSKRSKPANIRGTVKPKR 129
P D+ + PE + LA P G V Y+ K+ P++ P R
Sbjct: 270 PRVPGDSGKGPRPEYNAEPKLAAPGRSNFGP-----VWYVP--DKKKAPSSPPPPPPPLR 322
Query: 130 RKKHAVASAAPGQEALVGPSLQPQEAAREADAVAPGYAQGANLVKIGERPWRLVR--GPG 187
A A E GP AA+ A+A +G ++ +RPWR G
Sbjct: 323 SDSFA---ATKSHEKAQGPVFSEAAAAQHFTALAQAQPRGDRRPELTDRPWRSAHPGSLG 379
Query: 188 VRAGGPDFLQPSSRESNIRIYSESAPSWLSKDDIRRMRLLADSAVAGLR-PVSSRSG 243
+GGP Q + + SW D RL A + + +R P S SG
Sbjct: 380 KGSGGPGCPQEAHADG----------SWPPSKDGASSRLQASLSSSDVRFPQSPHSG 426
>gi|27881484 zinc finger CCCH-type containing 7B [Homo sapiens]
Length = 977
Score = 32.0 bits (71), Expect = 1.4
Identities = 22/99 (22%), Positives = 41/99 (41%), Gaps = 14/99 (14%)
Query: 335 HARLTWGTYQQLLKQKCWQNGRVPKPESG---CTEIHHHEWSKMALFDFLLQIYNRLDTN 391
H T+ + + +CW+NG+V +P+ C+ H W+K +L + ++
Sbjct: 684 HGPSTFDLQMKFVCGQCWRNGQVVEPDKDLKYCSAKARHCWTKERR---VLLVMSKAKRK 740
Query: 392 CCGFR--------PRKEDACVQNGLRPKCDDQGSAALAH 422
R P++ D C+ KC G+ + AH
Sbjct: 741 WVSVRPLPSIRNFPQQYDLCIHAQNGRKCQYVGNCSFAH 779
>gi|113416229 PREDICTED: hypothetical protein [Homo sapiens]
Length = 175
Score = 31.6 bits (70), Expect = 1.9
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 133 HAVASAAPGQEALVGPSLQPQEAAREADAVAPGYAQGANLVKIGERP 179
H + + P +AL P QEAA A A APG G+ + G RP
Sbjct: 113 HPGSGSVPLSQALQSPG--SQEAAAAAAAAAPGELSGSQVAAAGRRP 157
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 31.6 bits (70), Expect = 1.9
Identities = 36/138 (26%), Positives = 53/138 (38%), Gaps = 26/138 (18%)
Query: 82 PEIPLDGTLAPPESQGNGSTLQPNVVYITLRSKRSKPANIRGTVKPK------RRKKHAV 135
PE P L P E Q GS + P + + SKPA++ PK +K V
Sbjct: 143 PESPKPTPLTPLEPQKPGSVVSPELQTPLPSPEPSKPASVSSPEPPKSVPVCESQKLAPV 202
Query: 136 ASAAPGQEALVGP--------SLQPQEAAREADAVAPGYAQG--ANLVKIGERPWRLVRG 185
S P + A V P + +PQ+ + + + P A + ++ PW G
Sbjct: 203 PSPEPQKPAPVSPESVKATLSNPKPQKQSHFPETLGPPSASSPESPVLAASPEPW----G 258
Query: 186 PGVRAGGPDFLQPSSRES 203
P A P SR+S
Sbjct: 259 PSPAA------SPESRKS 270
>gi|169216516 PREDICTED: similar to paraneoplastic antigen MA1 [Homo
sapiens]
Length = 541
Score = 31.2 bits (69), Expect = 2.4
Identities = 38/141 (26%), Positives = 56/141 (39%), Gaps = 23/141 (16%)
Query: 106 VVYITLRSKRSKPANI--RGTVKPKRRKKHAVASAAPGQEALVGPSLQPQEAAREADAVA 163
++Y+ L + P + R P R AV ++A GP ++D
Sbjct: 20 LIYLGLLGEAGSPVVLAQRALETPALRSAAAVRRVGESEQAPAGP---------QSDRGR 70
Query: 164 PGYAQGANLVKIGERPWRLVRGPGVRAGGPDFLQPSS--RESNIR--IYSESAPSWLS-- 217
PG L ER R GP R GG +LQ S R+ N + S+ APS S
Sbjct: 71 PGQVPDRCLRSGRERGSRSGPGPAERGGGGSWLQESGCVRDCNSQHTFLSDQAPSLKSSA 130
Query: 218 ------KDDIRRMRLLADSAV 232
+D RRM + A+ ++
Sbjct: 131 IALAMLQDWCRRMGVNAERSL 151
>gi|241896898 family with sequence similarity 20, member A [Homo
sapiens]
Length = 541
Score = 30.8 bits (68), Expect = 3.2
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 275 SEVFAFHLDRILGLNRTLPSVSRKAEFIQAAAAACLS--MRLAFFIFPA 321
+E+ AFHLDRIL R P+V R + + ++ FF+ PA
Sbjct: 262 AEIAAFHLDRILDFRRVPPTVGRIVNVTKEILEVTKNEILQSVFFVSPA 310
>gi|83921602 solute carrier family 38, member 10 isoform a [Homo
sapiens]
Length = 1119
Score = 30.8 bits (68), Expect = 3.2
Identities = 49/182 (26%), Positives = 66/182 (36%), Gaps = 47/182 (25%)
Query: 52 VSQVGRASLQHGQAAEKGPHRSRDTAEPSFPEIPLDGTLAPP----------------ES 95
V Q A++ GQ A +G ++R+T E + P +PLD L P S
Sbjct: 750 VHQEPGAAVPRGQEAPEG--KARETVE-NLPPLPLDPVLRAPGGRPAPSQDLNQRSLEHS 806
Query: 96 QG-----------NGSTLQPNVVYITLRSKRSKPA-NIRGTVKPKRRKKHAVASAAPGQE 143
+G G +P LR + A GTVK + V P +E
Sbjct: 807 EGPVGRDPAGPPDGGPDTEPRAAQAKLRDGQKDAAPRAAGTVKELPKGPEQVPVPDPARE 866
Query: 144 ALVGPSLQPQE---------AAREADAVAPGY---AQGANLVKIGERPWRLVRGPGVRAG 191
A GP + E D PG A G +++K E W LV GPG G
Sbjct: 867 A-GGPEERLAEEFPGQSQDVTGGSQDRKKPGKEVAATGTSILK--EANW-LVAGPGAETG 922
Query: 192 GP 193
P
Sbjct: 923 DP 924
>gi|169658367 BAH domain and coiled-coil containing 1 [Homo sapiens]
Length = 2608
Score = 30.8 bits (68), Expect = 3.2
Identities = 29/124 (23%), Positives = 49/124 (39%), Gaps = 10/124 (8%)
Query: 57 RASLQHGQAAEKGPHRSRDTAEPSFPEIPLDG---------TLAPPESQGNGSTLQPNVV 107
R + H A+ GP TA SFP + L G AP + + +G T P+V
Sbjct: 340 RRQMLHHTASYAGPPPPLSTAAGSFPCLQLHGGPDGLCPLQDKAPRDLKASGPTFVPSVG 399
Query: 108 YITLRSKRSKPANIRGTVKPKRRKKHAVASAAPGQEALVGPSLQPQEAAREADAVAPGYA 167
++ + + + A V + + +H + AP A G S +A + + G+
Sbjct: 400 HLADKGRPFQAAE-ACAVAGEGKDRHLEGTMAPDHAAPYGVSYAHLKAEGKGERRPGGFE 458
Query: 168 QGAN 171
N
Sbjct: 459 AALN 462
>gi|148833506 obscurin, cytoskeletal calmodulin and titin-interacting
RhoGEF isoform b [Homo sapiens]
Length = 7968
Score = 30.4 bits (67), Expect = 4.2
Identities = 56/222 (25%), Positives = 80/222 (36%), Gaps = 41/222 (18%)
Query: 67 EKGPHRSRDTAEPSFPEIPLDGTLAPPESQG---NGSTLQPNVVYITLRSKRSKPANIRG 123
E+ R T P+ P P +G PP +QG S ++ ++ Y A G
Sbjct: 6834 EEAEASERSTEAPAPPASP-EGA-GPPAAQGCVPRHSVIR-SLFYHQAGESPEHGALAPG 6890
Query: 124 TVKPKRRKKHA-----VASAAPG-QEALVGPSLQPQEAAREADAV----APGYAQGANLV 173
+ + R++H +A A PG +E L+ + +EAARE A AP + L
Sbjct: 6891 SRRHPARRRHLLKGGYIAGALPGLREPLMEHRVLEEEAAREEQATLLAKAPSFETALRLP 6950
Query: 174 KIGERPWRLVRGPG----VRAGGPDFLQPSSRESNIRIYSESAPSWLSKDDIRRMRLLAD 229
G PG + P +PSS SAPS
Sbjct: 6951 ASGTH-----LAPGHSHSLEHDSPSTPRPSSEACGEAQRLPSAPS--------------- 6990
Query: 230 SAVAGLRPVSSRSGARLLVLEGGAPGAVLRCGPSPCGLLKQP 271
A +R + G++ L GG PG PSP QP
Sbjct: 6991 -GGAPIRDMGHPQGSKQLPSTGGHPGTAQPERPSPDSPWGQP 7031
>gi|239744995 PREDICTED: hypothetical protein XP_002343325 [Homo
sapiens]
Length = 909
Score = 30.4 bits (67), Expect = 4.2
Identities = 53/209 (25%), Positives = 75/209 (35%), Gaps = 39/209 (18%)
Query: 39 LLGTACAIYLGFLVSQVGRASLQHGQAAEKGPHRSRDTAEPSFPEIPLDGTLAPPES-QG 97
LLG +G + G +Q G +GP SR E PL PPE+ +G
Sbjct: 693 LLGPEVPGAVGAALRGGGEVGIQEGGV--RGPPTSRPARAQGAQESPLPAPSEPPEAVEG 750
Query: 98 NGSTLQPNVVYITLRSKRSKP-ANIRGTVKPKRRKKHAVASAAP----GQEAL--VGPSL 150
S + ++P + G + ++ A S P GQE L + PS
Sbjct: 751 KASPREQGE-----EGAPTQPCCGLAGGPQAGPTQQPAARSGHPNGEIGQEGLGKLVPSP 805
Query: 151 QPQEA-AREADAVAPGYAQGANLVKIGERPWRLVRGPGVRAGGPDFLQPSSRESNIRIYS 209
P+E R AVAPG A A G + GP+ + +
Sbjct: 806 APRELYLRATRAVAPGGAHAA--------------GASISPAGPEHRED---------LT 842
Query: 210 ESAPSWLSKDDIRRMRLLADSAVAGLRPV 238
E+ + R +LL DS V RPV
Sbjct: 843 ETQRPCPRSGALCRPQLLRDSPVGAARPV 871
>gi|116174742 family with sequence similarity 20, member C [Homo
sapiens]
Length = 584
Score = 30.4 bits (67), Expect = 4.2
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Query: 275 SEVFAFHLDRILGLNRTLPSVSRKAEFIQAAAAACLSMRL--AFFIFPA 321
+E+ AFHLDRIL R P R + +L FFI PA
Sbjct: 310 AEIAAFHLDRILDFRRVPPVAGRMVNMTKEIRDVTRDKKLWRTFFISPA 358
>gi|150170729 microtubule associated serine/threonine kinase 3 [Homo
sapiens]
Length = 1309
Score = 30.4 bits (67), Expect = 4.2
Identities = 32/120 (26%), Positives = 47/120 (39%), Gaps = 8/120 (6%)
Query: 82 PEIPLDGTLAPPE-SQGNGSTLQPNVVYITLRSKRSKPANIRGTVKPKRRKKHAVASAAP 140
P++P D T +PP S + S P T S A G +PK ++ + +S P
Sbjct: 1127 PDVPADTTASPPSASPSSSSPASPAAAGHTRPSSLHGLAAKLGPPRPKTGRRKSTSSIPP 1186
Query: 141 GQEALVGPSLQPQEAAR------EADAVAPGYAQGANLVKIGERPWRLVRGPGVRAGGPD 194
A S P + A A +P +G + K+G RL G R GP+
Sbjct: 1187 SPLACPPISAPPPRSPSPLPGHPPAPARSPRLRRGQSADKLGTGE-RLDGEAGRRTRGPE 1245
>gi|17998698 GATA binding protein 5 [Homo sapiens]
Length = 397
Score = 30.4 bits (67), Expect = 4.2
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 112 RSKRSKPANIRGTVKPKRRKKHAVASAAPGQEALVGPSLQPQEAAREADAVAPGYAQ 168
R+ + P+ + T K + A+P GPS+ PQ + +E D++APG+ +
Sbjct: 308 RNASASPSAVASTDSSAATSKAKPSLASP---VCPGPSMAPQASGQEDDSLAPGHLE 361
>gi|153070260 myristoylated alanine-rich protein kinase C substrate
[Homo sapiens]
Length = 332
Score = 30.0 bits (66), Expect = 5.4
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Query: 137 SAAPGQEALVGPSL----QPQEAAREADAVAPGYAQGANLVKIGERPWRLVRGPGVRAG 191
+AAPG+EA G PQEA + AVAP ++ K E P ++ AG
Sbjct: 215 AAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPASDETKAAEEPSKVEEKKAEEAG 273
>gi|116256471 SNF1-like kinase [Homo sapiens]
Length = 783
Score = 30.0 bits (66), Expect = 5.4
Identities = 35/144 (24%), Positives = 60/144 (41%), Gaps = 7/144 (4%)
Query: 119 ANIRGTVKPKRRKKHAVASAAPGQEALVGPSLQPQEAAREADAVAPGYAQGANLVKIGER 178
A+ G +P+ ++ A +EA GP L+ ++ +E+ + G V
Sbjct: 423 ASCSGVFRPRPVSPSSLLDTAISEEARQGPGLEEEQDTQESLPSSTGRRHTLAEVSTRLS 482
Query: 179 PWR---LVRGPGVRAGGPDFLQPSSRESNIRIYSESAPSWLSKDDIRRMRLLADSAVAGL 235
P +V P A + +S +S + + +P+ LS + L A S V
Sbjct: 483 PLTAPCIVVSPSTTASP---AEGTSSDSCLTFSASKSPAGLSGTPATQGLLGACSPVRLA 539
Query: 236 RP-VSSRSGARLLVLEGGAPGAVL 258
P + S+S +L +GG GAVL
Sbjct: 540 SPFLGSQSATPVLQAQGGLGGAVL 563
>gi|239758117 PREDICTED: hypothetical protein [Homo sapiens]
Length = 465
Score = 29.6 bits (65), Expect = 7.1
Identities = 43/144 (29%), Positives = 60/144 (41%), Gaps = 18/144 (12%)
Query: 51 LVSQVGRA---SLQHGQAAEKGPHRSRDTAEPSFPEIPLDGTLAPPESQGNGSTLQPNVV 107
L+S GRA S+Q A E+ R EP E T + P L + V
Sbjct: 80 LLSHRGRAQRRSIQAAAAQEQSTGRGCLGKEPPSQE---SWTRSDPRR-----CLSQDAV 131
Query: 108 YITLRSKRSKPANIRGTVKPKRRKKHAVASAAPGQEALVGPSLQPQEAAREADAVAPGYA 167
R RS+P G K RR+K AVA G ++ G +PQ ++A A A +
Sbjct: 132 RSGSRVCRSRPQTRGGGGKQPRRQKAAVA----GAKSRGGEGKKPQRRGQKA-ATAGAKS 186
Query: 168 QGANLVKIGERPWRLVRGPGVRAG 191
+G + +G + R RG AG
Sbjct: 187 RGGGVRSLGGKKMR--RGQKGAAG 208
>gi|239748132 PREDICTED: hypothetical protein XP_002346560 [Homo
sapiens]
Length = 154
Score = 29.6 bits (65), Expect = 7.1
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Query: 246 LLVLEGGAPGAVLRCGPSPCGLLKQPLDMSEVFAFHLDRILGLNRTLPSVSRKAEFIQAA 305
L L+G VLRC P+P GL Q L S VF +R+L + + A Q
Sbjct: 64 LACLQGPGVAPVLRCAPTPAGLSLQ-LQRSAVF----ERVLSAVAAYATPASPASLGQRV 118
Query: 306 AAACLSMR 313
C ++R
Sbjct: 119 LLHCPALR 126
>gi|239743055 PREDICTED: hypothetical protein XP_002342730 [Homo
sapiens]
Length = 235
Score = 29.6 bits (65), Expect = 7.1
Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 26/134 (19%)
Query: 127 PKRRKKHAVASAAPGQEALVGPSLQPQEAAREADAVAPGYAQGANLVKIGERPWRLVRGP 186
P+R +H V+S++ GP + G A+GA L + + GP
Sbjct: 81 PQRSHEHHVSSSSKSSACGAGPGV--------------GAAKGA-LCRTRTQHGHSECGP 125
Query: 187 GVRAGGPDFLQPSSRESNIRIYSESAPSWLSKDDIRRMRLLADSAVAGLRPVSSRSGARL 246
G+ +P SRES +WL R L+ + AG++ V+ +GAR
Sbjct: 126 GIP-------KPPSRESEAGGDGGRQEAWLCVLGKLRFLTLSLNVQAGVKSVT--AGARR 176
Query: 247 LVLE--GGAPGAVL 258
L+ E G + GAVL
Sbjct: 177 LLCEFHGASAGAVL 190
>gi|58331230 DALR anticodon binding domain containing 3 isoform 1
[Homo sapiens]
Length = 543
Score = 29.6 bits (65), Expect = 7.1
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Query: 246 LLVLEGGAPGAVLRCGPSPCGLLKQPLDMSEVFAFHLDRILGLNRTLPSVSRKAEFIQAA 305
L L+G VLRC P+P GL Q L S VF +R+L + + A Q
Sbjct: 64 LACLQGPGVAPVLRCAPTPAGLSLQ-LQRSAVF----ERVLSAVAAYATPASPASLGQRV 118
Query: 306 AAACLSMR 313
C ++R
Sbjct: 119 LLHCPALR 126
>gi|222418771 glycerate kinase isoform 2 [Homo sapiens]
Length = 234
Score = 29.3 bits (64), Expect = 9.3
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 10/85 (11%)
Query: 183 VRGPGVRAGGPDFL-QPSSRESNIRIYSESAPSWLSKDDIRRMRLLADSAVAGLRPVSSR 241
+R RAG + L +P SR ++++ E A L D R L GL +
Sbjct: 116 IRAAMERAGKQEMLLKPHSR---VQVF-EGAEDNLPDRDALRAALAIQQLAEGL----TA 167
Query: 242 SGARLLVLEGGAPGAVLRCGPSPCG 266
L+++ GG P V RCG PCG
Sbjct: 168 DDLLLVLISGGEPHPV-RCGGGPCG 191
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.137 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,501,873
Number of Sequences: 37866
Number of extensions: 1083534
Number of successful extensions: 2913
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 2893
Number of HSP's gapped (non-prelim): 44
length of query: 527
length of database: 18,247,518
effective HSP length: 107
effective length of query: 420
effective length of database: 14,195,856
effective search space: 5962259520
effective search space used: 5962259520
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.