Guide to the Human Genome
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Name: GK Sequence: fasta or formatted (553aa) NCBI GI: 189409120
Description:

glycerol kinase isoform c

Referenced in:

Lipid Metabolism

Other entries for this name:
alt prot [530aa] glycerol kinase isoform a
alt prot [524aa] glycerol kinase isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         42           2
 C cysteine            2.7         15           1
 D aspartate           3.4         19           1
 E glutamate           6.7         37           2
 F phenylalanine       3.8         21           2
 G glycine             8.5         47           2
 H histidine           1.6          9           2
 I isoleucine          6.7         37           2
 K lysine              5.6         31           2
 L leucine             9.4         52           2
 M methionine          2.7         15           1
 N asparagine          3.6         20           3
 P proline             4.2         23           1
 Q glutamine           3.6         20           1
 R arginine            3.4         19           1
 S serine              8.0         44           3
 T threonine           6.0         33           2
 V valine              7.6         42           2
 W tryptophan          2.2         12           1
 Y tyrosine            2.7         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glycerol kinase isoform c 
GK                    0.946   glycerol kinase isoform b 
GK                    0.940   glycerol kinase isoform a 
GK2                   0.901   glycerol kinase 2 
GK5                   0.227   glycerol kinase 5 (putative) 
FGGY                  0.045   FGGY carbohydrate kinase domain containing isoform ...
FGGY                  0.039   FGGY carbohydrate kinase domain containing isoform ...
SHPK                  0.018   carbohydrate kinase-like 
PALM2-AKAP2           0.007   PALM2-AKAP2 protein isoform 2 
PALM2-AKAP2           0.007   PALM2-AKAP2 protein isoform 1 
AKAP2                 0.007   A kinase (PRKA) anchor protein 2 isoform 2 
AKAP2                 0.007   A kinase (PRKA) anchor protein 2 isoform 1 
PRELP                 0.005   proline arginine-rich end leucine-rich repeat protei...
PRELP                 0.005   proline arginine-rich end leucine-rich repeat protein...
LOC653889             0.005   PREDICTED: similar to U5 snRNP-associated 102 kDa p...
PRPF6                 0.005   PRP6 pre-mRNA processing factor 6 homolog 
ELTD1                 0.005   EGF, latrophilin and seven transmembrane domain con...
MYL3                  0.004   slow skeletal ventricular myosin alkali light chain 3...
HS3ST1                0.004   heparan sulfate D-glucosaminyl 3-O-sulfotransferase 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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