Guide to the Human Genome
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Name: GK2 Sequence: fasta or formatted (553aa) NCBI GI: 41393575
Description:

glycerol kinase 2

Referenced in:

Lipid Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         45           2
 C cysteine            2.7         15           1
 D aspartate           3.4         19           1
 E glutamate           6.9         38           2
 F phenylalanine       4.2         23           2
 G glycine             8.5         47           2
 H histidine           1.4          8           2
 I isoleucine          5.8         32           2
 K lysine              4.9         27           2
 L leucine             9.9         55           2
 M methionine          2.7         15           1
 N asparagine          3.8         21           2
 P proline             4.3         24           1
 Q glutamine           3.6         20           1
 R arginine            3.8         21           1
 S serine              6.9         38           3
 T threonine           6.5         36           2
 V valine              7.8         43           2
 W tryptophan          2.2         12           1
 Y tyrosine            2.5         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glycerol kinase 2 
GK                    0.899   glycerol kinase isoform c 
GK                    0.849   glycerol kinase isoform b 
GK                    0.845   glycerol kinase isoform a 
GK5                   0.214   glycerol kinase 5 (putative) 
FGGY                  0.025   FGGY carbohydrate kinase domain containing isoform ...
FGGY                  0.022   FGGY carbohydrate kinase domain containing isoform ...
SHPK                  0.016   carbohydrate kinase-like 
HS3ST1                0.007   heparan sulfate D-glucosaminyl 3-O-sulfotransferase 1...
PALM2-AKAP2           0.006   PALM2-AKAP2 protein isoform 2 
PALM2-AKAP2           0.006   PALM2-AKAP2 protein isoform 1 
AKAP2                 0.006   A kinase (PRKA) anchor protein 2 isoform 2 
AKAP2                 0.006   A kinase (PRKA) anchor protein 2 isoform 1 
SEMA3C                0.005   semaphorin 3C 
SMG1                  0.005   PI-3-kinase-related kinase SMG-1 
LOC653889             0.004   PREDICTED: similar to U5 snRNP-associated 102 kDa p...
PRPF6                 0.004   PRP6 pre-mRNA processing factor 6 homolog 
ELTD1                 0.004   EGF, latrophilin and seven transmembrane domain con...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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