Guide to the Human Genome
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Name: GK5 Sequence: fasta or formatted (529aa) NCBI GI: 88196792
Description:

glycerol kinase 5 (putative)

Referenced in:

Lipid Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         36           2
 C cysteine            2.6         14           2
 D aspartate           4.7         25           1
 E glutamate           5.5         29           3
 F phenylalanine       5.3         28           2
 G glycine             6.8         36           2
 H histidine           1.5          8           1
 I isoleucine          5.9         31           1
 K lysine              6.2         33           2
 L leucine             9.1         48           2
 M methionine          3.0         16           2
 N asparagine          4.2         22           2
 P proline             3.6         19           2
 Q glutamine           5.1         27           2
 R arginine            3.6         19           1
 S serine              7.6         40           2
 T threonine           6.6         35           2
 V valine              7.2         38           2
 W tryptophan          2.6         14           1
 Y tyrosine            2.1         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glycerol kinase 5 (putative) 
GK                    0.236   glycerol kinase isoform c 
GK                    0.236   glycerol kinase isoform b 
GK                    0.234   glycerol kinase isoform a 
GK2                   0.222   glycerol kinase 2 
FGGY                  0.024   FGGY carbohydrate kinase domain containing isoform ...
FGGY                  0.024   FGGY carbohydrate kinase domain containing isoform ...
XYLB                  0.012   xylulokinase 
SHPK                  0.010   carbohydrate kinase-like 
C7orf58               0.008   hypothetical protein LOC79974 isoform 2 
C7orf58               0.008   hypothetical protein LOC79974 isoform 1 
NLRP13                0.005   NACHT, leucine rich repeat and PYD containing 13 [H...
NOTCH1                0.004   notch1 preproprotein 
DYNC2H1               0.004   dynein, cytoplasmic 2, heavy chain 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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