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Search of human proteins with 189083840
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|189083840 Fc fragment of IgG, low affinity IIIa, receptor
(CD16a) isoform c precursor [Homo sapiens]
(254 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|189083840 Fc fragment of IgG, low affinity IIIa, receptor (CD... 528 e-150
gi|189083838 Fc fragment of IgG, low affinity IIIa, receptor (CD... 528 e-150
gi|50726979 Fc fragment of IgG, low affinity IIIa, receptor (CD1... 528 e-150
gi|189083842 Fc fragment of IgG, low affinity IIIa, receptor (CD... 522 e-148
gi|189083836 Fc fragment of IgG, low affinity IIIa, receptor (CD... 522 e-148
gi|132814489 low affinity immunoglobulin gamma Fc region recepto... 464 e-131
gi|239758047 PREDICTED: similar to hCG2039165 [Homo sapiens] 188 4e-48
gi|210031822 Fc fragment of IgG, low affinity IIa, receptor isof... 184 8e-47
gi|50511936 Fc fragment of IgG, low affinity IIa, receptor isofo... 181 7e-46
gi|63055063 Fc fragment of IgG, high affinity Ib, receptor (CD64... 176 2e-44
gi|50511926 Fc fragment of IgG, low affinity IIb, receptor isofo... 174 9e-44
gi|50511930 Fc fragment of IgG, low affinity IIb, receptor isofo... 174 9e-44
gi|50511928 Fc fragment of IgG, low affinity IIb, receptor isofo... 172 3e-43
gi|50511932 Fc fragment of IgG, low affinity IIb, receptor isofo... 172 3e-43
gi|126116592 Fc fragment of IgG, low affinity IIc, receptor [Hom... 171 4e-43
gi|10835133 Fc fragment of IgG, high affinity Ia, receptor (CD64... 167 6e-42
gi|4503675 Fc fragment of IgE, high affinity I, receptor for; al... 162 3e-40
gi|50878302 Fc receptor-like B [Homo sapiens] 113 1e-25
gi|157694526 Fc receptor-like 5 [Homo sapiens] 107 1e-23
gi|219804014 Fc fragment of IgG, high affinity Ib, receptor (CD6... 89 3e-18
gi|21314764 Fc receptor-like 3 precursor [Homo sapiens] 82 6e-16
gi|14550416 Fc receptor-like 4 precursor [Homo sapiens] 79 3e-15
gi|69885149 Fc receptor-like and mucin-like 1 [Homo sapiens] 64 1e-10
gi|157057547 Fc receptor-like 6 [Homo sapiens] 54 1e-07
gi|19923629 Fc receptor-like 2 precursor [Homo sapiens] 51 1e-06
gi|40255013 carcinoembryonic antigen-related cell adhesion molec... 45 5e-05
gi|110349719 titin isoform N2-A [Homo sapiens] 44 2e-04
gi|68161541 carcinoembryonic antigen-related cell adhesion molec... 44 2e-04
gi|19923195 carcinoembryonic antigen-related cell adhesion molec... 44 2e-04
gi|98986445 carcinoembryonic antigen-related cell adhesion molec... 44 2e-04
>gi|189083840 Fc fragment of IgG, low affinity IIIa, receptor
(CD16a) isoform c precursor [Homo sapiens]
Length = 254
Score = 528 bits (1361), Expect = e-150
Identities = 254/254 (100%), Positives = 254/254 (100%)
Query: 1 MWQLLLPTALLLLVSAGMRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQW 60
MWQLLLPTALLLLVSAGMRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQW
Sbjct: 1 MWQLLLPTALLLLVSAGMRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQW 60
Query: 61 FHNESLISSQASSYFIDAATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKE 120
FHNESLISSQASSYFIDAATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKE
Sbjct: 61 FHNESLISSQASSYFIDAATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKE 120
Query: 121 EDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLFGSKN 180
EDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLFGSKN
Sbjct: 121 EDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLFGSKN 180
Query: 181 VSSETVNITITQGLAVSTISSFFPPGYQVSFCLVMVLLFAVDTGLYFSVKTNIRSSTRDW 240
VSSETVNITITQGLAVSTISSFFPPGYQVSFCLVMVLLFAVDTGLYFSVKTNIRSSTRDW
Sbjct: 181 VSSETVNITITQGLAVSTISSFFPPGYQVSFCLVMVLLFAVDTGLYFSVKTNIRSSTRDW 240
Query: 241 KDHKFKWRKDPQDK 254
KDHKFKWRKDPQDK
Sbjct: 241 KDHKFKWRKDPQDK 254
>gi|189083838 Fc fragment of IgG, low affinity IIIa, receptor
(CD16a) isoform c precursor [Homo sapiens]
Length = 254
Score = 528 bits (1361), Expect = e-150
Identities = 254/254 (100%), Positives = 254/254 (100%)
Query: 1 MWQLLLPTALLLLVSAGMRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQW 60
MWQLLLPTALLLLVSAGMRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQW
Sbjct: 1 MWQLLLPTALLLLVSAGMRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQW 60
Query: 61 FHNESLISSQASSYFIDAATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKE 120
FHNESLISSQASSYFIDAATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKE
Sbjct: 61 FHNESLISSQASSYFIDAATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKE 120
Query: 121 EDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLFGSKN 180
EDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLFGSKN
Sbjct: 121 EDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLFGSKN 180
Query: 181 VSSETVNITITQGLAVSTISSFFPPGYQVSFCLVMVLLFAVDTGLYFSVKTNIRSSTRDW 240
VSSETVNITITQGLAVSTISSFFPPGYQVSFCLVMVLLFAVDTGLYFSVKTNIRSSTRDW
Sbjct: 181 VSSETVNITITQGLAVSTISSFFPPGYQVSFCLVMVLLFAVDTGLYFSVKTNIRSSTRDW 240
Query: 241 KDHKFKWRKDPQDK 254
KDHKFKWRKDPQDK
Sbjct: 241 KDHKFKWRKDPQDK 254
>gi|50726979 Fc fragment of IgG, low affinity IIIa, receptor (CD16a)
isoform a precursor [Homo sapiens]
Length = 290
Score = 528 bits (1361), Expect = e-150
Identities = 254/254 (100%), Positives = 254/254 (100%)
Query: 1 MWQLLLPTALLLLVSAGMRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQW 60
MWQLLLPTALLLLVSAGMRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQW
Sbjct: 37 MWQLLLPTALLLLVSAGMRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQW 96
Query: 61 FHNESLISSQASSYFIDAATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKE 120
FHNESLISSQASSYFIDAATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKE
Sbjct: 97 FHNESLISSQASSYFIDAATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKE 156
Query: 121 EDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLFGSKN 180
EDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLFGSKN
Sbjct: 157 EDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLFGSKN 216
Query: 181 VSSETVNITITQGLAVSTISSFFPPGYQVSFCLVMVLLFAVDTGLYFSVKTNIRSSTRDW 240
VSSETVNITITQGLAVSTISSFFPPGYQVSFCLVMVLLFAVDTGLYFSVKTNIRSSTRDW
Sbjct: 217 VSSETVNITITQGLAVSTISSFFPPGYQVSFCLVMVLLFAVDTGLYFSVKTNIRSSTRDW 276
Query: 241 KDHKFKWRKDPQDK 254
KDHKFKWRKDPQDK
Sbjct: 277 KDHKFKWRKDPQDK 290
>gi|189083842 Fc fragment of IgG, low affinity IIIa, receptor
(CD16a) isoform d precursor [Homo sapiens]
Length = 253
Score = 522 bits (1344), Expect = e-148
Identities = 253/254 (99%), Positives = 253/254 (99%), Gaps = 1/254 (0%)
Query: 1 MWQLLLPTALLLLVSAGMRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQW 60
MWQLLLPTALLLLVSAGMRT DLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQW
Sbjct: 1 MWQLLLPTALLLLVSAGMRT-DLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQW 59
Query: 61 FHNESLISSQASSYFIDAATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKE 120
FHNESLISSQASSYFIDAATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKE
Sbjct: 60 FHNESLISSQASSYFIDAATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKE 119
Query: 121 EDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLFGSKN 180
EDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLFGSKN
Sbjct: 120 EDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLFGSKN 179
Query: 181 VSSETVNITITQGLAVSTISSFFPPGYQVSFCLVMVLLFAVDTGLYFSVKTNIRSSTRDW 240
VSSETVNITITQGLAVSTISSFFPPGYQVSFCLVMVLLFAVDTGLYFSVKTNIRSSTRDW
Sbjct: 180 VSSETVNITITQGLAVSTISSFFPPGYQVSFCLVMVLLFAVDTGLYFSVKTNIRSSTRDW 239
Query: 241 KDHKFKWRKDPQDK 254
KDHKFKWRKDPQDK
Sbjct: 240 KDHKFKWRKDPQDK 253
>gi|189083836 Fc fragment of IgG, low affinity IIIa, receptor
(CD16a) isoform b precursor [Homo sapiens]
Length = 289
Score = 522 bits (1344), Expect = e-148
Identities = 253/254 (99%), Positives = 253/254 (99%), Gaps = 1/254 (0%)
Query: 1 MWQLLLPTALLLLVSAGMRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQW 60
MWQLLLPTALLLLVSAGMRT DLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQW
Sbjct: 37 MWQLLLPTALLLLVSAGMRT-DLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQW 95
Query: 61 FHNESLISSQASSYFIDAATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKE 120
FHNESLISSQASSYFIDAATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKE
Sbjct: 96 FHNESLISSQASSYFIDAATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKE 155
Query: 121 EDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLFGSKN 180
EDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLFGSKN
Sbjct: 156 EDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLFGSKN 215
Query: 181 VSSETVNITITQGLAVSTISSFFPPGYQVSFCLVMVLLFAVDTGLYFSVKTNIRSSTRDW 240
VSSETVNITITQGLAVSTISSFFPPGYQVSFCLVMVLLFAVDTGLYFSVKTNIRSSTRDW
Sbjct: 216 VSSETVNITITQGLAVSTISSFFPPGYQVSFCLVMVLLFAVDTGLYFSVKTNIRSSTRDW 275
Query: 241 KDHKFKWRKDPQDK 254
KDHKFKWRKDPQDK
Sbjct: 276 KDHKFKWRKDPQDK 289
>gi|132814489 low affinity immunoglobulin gamma Fc region receptor
III-B precursor [Homo sapiens]
Length = 233
Score = 464 bits (1195), Expect = e-131
Identities = 226/233 (96%), Positives = 229/233 (98%)
Query: 1 MWQLLLPTALLLLVSAGMRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQW 60
MWQLLLPTALLLLVSAGMRTEDLPKAVVFLEPQWY VLEKDSVTLKCQGAYSPEDNSTQW
Sbjct: 1 MWQLLLPTALLLLVSAGMRTEDLPKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQW 60
Query: 61 FHNESLISSQASSYFIDAATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKE 120
FHNE+LISSQASSYFIDAATV+DSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKE
Sbjct: 61 FHNENLISSQASSYFIDAATVNDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKE 120
Query: 121 EDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLFGSKN 180
EDPIHLRCHSWKNTALHKVTYLQNGK RKYFHHNSDF+IPKATLKDSGSYFCRGL GSKN
Sbjct: 121 EDPIHLRCHSWKNTALHKVTYLQNGKDRKYFHHNSDFHIPKATLKDSGSYFCRGLVGSKN 180
Query: 181 VSSETVNITITQGLAVSTISSFFPPGYQVSFCLVMVLLFAVDTGLYFSVKTNI 233
VSSETVNITITQGLAVSTISSF PPGYQVSFCLVMVLLFAVDTGLYFSVKTNI
Sbjct: 181 VSSETVNITITQGLAVSTISSFSPPGYQVSFCLVMVLLFAVDTGLYFSVKTNI 233
>gi|239758047 PREDICTED: similar to hCG2039165 [Homo sapiens]
Length = 103
Score = 188 bits (477), Expect = 4e-48
Identities = 91/93 (97%), Positives = 92/93 (98%)
Query: 18 MRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFID 77
MRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFID
Sbjct: 1 MRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASSYFID 60
Query: 78 AATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLL 110
AATVDDSGEYRCQTNLSTLSDPVQLEVHIG L+
Sbjct: 61 AATVDDSGEYRCQTNLSTLSDPVQLEVHIGELM 93
Score = 28.9 bits (63), Expect = 4.5
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 17/68 (25%)
Query: 114 PRWV-FKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNS-------DFYIPKATLK 165
P+W E+D + L+C Y ++FH+ S ++I AT+
Sbjct: 15 PQWYRVLEKDSVTLKCQG---------AYSPEDNSTQWFHNESLISSQASSYFIDAATVD 65
Query: 166 DSGSYFCR 173
DSG Y C+
Sbjct: 66 DSGEYRCQ 73
>gi|210031822 Fc fragment of IgG, low affinity IIa, receptor isoform
1 [Homo sapiens]
Length = 317
Score = 184 bits (466), Expect = 8e-47
Identities = 105/241 (43%), Positives = 138/241 (57%), Gaps = 6/241 (2%)
Query: 1 MWQLLLPTALLLLVSAGMRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQW 60
+W L T LLLL SA + PKAV+ LEP W VL++DSVTL CQGA SPE +S QW
Sbjct: 16 LWLLQPLTVLLLLASADSQAAAPPKAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQW 75
Query: 61 FHNESLISSQASSYFIDAATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKE 120
FHN +LI + + A +DSGEY CQT ++LSDPV L V WL+LQ P F+E
Sbjct: 76 FHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSLSDPVHLTVLSEWLVLQTPHLEFQE 135
Query: 121 EDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLFGSKN 180
+ I LRCHSWK+ L KVT+ QNGK +K+ H + F IP+A SG Y C G G
Sbjct: 136 GETIMLRCHSWKDKPLVKVTFFQNGKSQKFSHLDPTFSIPQANHSHSGDYHCTGNIGYTL 195
Query: 181 VSSETVNITITQGLAVSTISSFFPPGYQVSFCL--VMVLLFAVDTGLYFSVKTNIRSSTR 238
SS+ V IT+ V ++ S P G V+ + + + A L + K I +++
Sbjct: 196 FSSKPVTITV----QVPSMGSSSPMGIIVAVVIATAVAAIVAAVVALIYCRKKRISANST 251
Query: 239 D 239
D
Sbjct: 252 D 252
>gi|50511936 Fc fragment of IgG, low affinity IIa, receptor isoform
2 [Homo sapiens]
Length = 316
Score = 181 bits (458), Expect = 7e-46
Identities = 105/241 (43%), Positives = 138/241 (57%), Gaps = 7/241 (2%)
Query: 1 MWQLLLPTALLLLVSAGMRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQW 60
+W L T LLLL SA + PKAV+ LEP W VL++DSVTL CQGA SPE +S QW
Sbjct: 16 LWLLQPLTVLLLLASADSQAAP-PKAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQW 74
Query: 61 FHNESLISSQASSYFIDAATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKE 120
FHN +LI + + A +DSGEY CQT ++LSDPV L V WL+LQ P F+E
Sbjct: 75 FHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSLSDPVHLTVLSEWLVLQTPHLEFQE 134
Query: 121 EDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLFGSKN 180
+ I LRCHSWK+ L KVT+ QNGK +K+ H + F IP+A SG Y C G G
Sbjct: 135 GETIMLRCHSWKDKPLVKVTFFQNGKSQKFSHLDPTFSIPQANHSHSGDYHCTGNIGYTL 194
Query: 181 VSSETVNITITQGLAVSTISSFFPPGYQVSFCL--VMVLLFAVDTGLYFSVKTNIRSSTR 238
SS+ V IT+ V ++ S P G V+ + + + A L + K I +++
Sbjct: 195 FSSKPVTITV----QVPSMGSSSPMGIIVAVVIATAVAAIVAAVVALIYCRKKRISANST 250
Query: 239 D 239
D
Sbjct: 251 D 251
>gi|63055063 Fc fragment of IgG, high affinity Ib, receptor (CD64)
isoform a [Homo sapiens]
Length = 280
Score = 176 bits (445), Expect = 2e-44
Identities = 94/234 (40%), Positives = 140/234 (59%), Gaps = 10/234 (4%)
Query: 1 MWQLLLPTALLLLVSAGMRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQW 60
MW L T LLL V + D KAV+ L+P W V ++++VTL C+ + P +STQW
Sbjct: 1 MWFL---TTLLLWVPVDGQV-DTTKAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQW 56
Query: 61 FHNESLISSQASSYFIDAATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKE 120
F N + + SY I +A+V+DSGEYRCQ LS SDP+QLE+H GWLLLQ VF E
Sbjct: 57 FLNGTATQTSTPSYRITSASVNDSGEYRCQRGLSGRSDPIQLEIHRGWLLLQVSSRVFME 116
Query: 121 EDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLFGSKN 180
+P+ LRCH+WK+ ++ V Y +NGK K+FH NS+ I K + +G+Y C G+ G
Sbjct: 117 GEPLALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNISHNGTYHCSGM-GKHR 175
Query: 181 VSSETVNITITQGLAVSTISSFFPPGYQVSFCLVMVLLFAVDTGLYFSVKTNIR 234
+S ++ +GL + T P + V F L + ++F V+T L+ +++ ++
Sbjct: 176 YTSAGISQYTVKGLQLPT-----PVWFHVLFYLAVGIMFLVNTVLWVTIRKELK 224
>gi|50511926 Fc fragment of IgG, low affinity IIb, receptor isoform
3 [Homo sapiens]
Length = 291
Score = 174 bits (440), Expect = 9e-44
Identities = 90/187 (48%), Positives = 116/187 (62%)
Query: 4 LLLPTALLLLVSAGMRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHN 63
+LL TA+L L PKAV+ LEPQW VL++DSVTL C+G +SPE +S QWFHN
Sbjct: 28 MLLWTAVLFLAPVAGTPAAPPKAVLKLEPQWINVLQEDSVTLTCRGTHSPESDSIQWFHN 87
Query: 64 ESLISSQASSYFIDAATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDP 123
+LI + + A +DSGEY CQT ++LSDPV L V WL+LQ P F+E +
Sbjct: 88 GNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSLSDPVHLTVLSEWLVLQTPHLEFQEGET 147
Query: 124 IHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLFGSKNVSS 183
I LRCHSWK+ L KVT+ QNGK +K+ + +F IP+A SG Y C G G SS
Sbjct: 148 IVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPNFSIPQANHSHSGDYHCTGNIGYTLYSS 207
Query: 184 ETVNITI 190
+ V IT+
Sbjct: 208 KPVTITV 214
>gi|50511930 Fc fragment of IgG, low affinity IIb, receptor isoform
1 [Homo sapiens]
Length = 310
Score = 174 bits (440), Expect = 9e-44
Identities = 90/187 (48%), Positives = 116/187 (62%)
Query: 4 LLLPTALLLLVSAGMRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHN 63
+LL TA+L L PKAV+ LEPQW VL++DSVTL C+G +SPE +S QWFHN
Sbjct: 28 MLLWTAVLFLAPVAGTPAAPPKAVLKLEPQWINVLQEDSVTLTCRGTHSPESDSIQWFHN 87
Query: 64 ESLISSQASSYFIDAATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDP 123
+LI + + A +DSGEY CQT ++LSDPV L V WL+LQ P F+E +
Sbjct: 88 GNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSLSDPVHLTVLSEWLVLQTPHLEFQEGET 147
Query: 124 IHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLFGSKNVSS 183
I LRCHSWK+ L KVT+ QNGK +K+ + +F IP+A SG Y C G G SS
Sbjct: 148 IVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPNFSIPQANHSHSGDYHCTGNIGYTLYSS 207
Query: 184 ETVNITI 190
+ V IT+
Sbjct: 208 KPVTITV 214
>gi|50511928 Fc fragment of IgG, low affinity IIb, receptor isoform
4 [Homo sapiens]
Length = 309
Score = 172 bits (436), Expect = 3e-43
Identities = 91/187 (48%), Positives = 117/187 (62%), Gaps = 1/187 (0%)
Query: 4 LLLPTALLLLVSAGMRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHN 63
+LL TA+L L T PKAV+ LEPQW VL++DSVTL C+G +SPE +S QWFHN
Sbjct: 28 MLLWTAVLFLAPVA-GTPAPPKAVLKLEPQWINVLQEDSVTLTCRGTHSPESDSIQWFHN 86
Query: 64 ESLISSQASSYFIDAATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDP 123
+LI + + A +DSGEY CQT ++LSDPV L V WL+LQ P F+E +
Sbjct: 87 GNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSLSDPVHLTVLSEWLVLQTPHLEFQEGET 146
Query: 124 IHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLFGSKNVSS 183
I LRCHSWK+ L KVT+ QNGK +K+ + +F IP+A SG Y C G G SS
Sbjct: 147 IVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPNFSIPQANHSHSGDYHCTGNIGYTLYSS 206
Query: 184 ETVNITI 190
+ V IT+
Sbjct: 207 KPVTITV 213
>gi|50511932 Fc fragment of IgG, low affinity IIb, receptor isoform
2 [Homo sapiens]
Length = 290
Score = 172 bits (436), Expect = 3e-43
Identities = 91/187 (48%), Positives = 117/187 (62%), Gaps = 1/187 (0%)
Query: 4 LLLPTALLLLVSAGMRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHN 63
+LL TA+L L T PKAV+ LEPQW VL++DSVTL C+G +SPE +S QWFHN
Sbjct: 28 MLLWTAVLFLAPVA-GTPAPPKAVLKLEPQWINVLQEDSVTLTCRGTHSPESDSIQWFHN 86
Query: 64 ESLISSQASSYFIDAATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDP 123
+LI + + A +DSGEY CQT ++LSDPV L V WL+LQ P F+E +
Sbjct: 87 GNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSLSDPVHLTVLSEWLVLQTPHLEFQEGET 146
Query: 124 IHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLFGSKNVSS 183
I LRCHSWK+ L KVT+ QNGK +K+ + +F IP+A SG Y C G G SS
Sbjct: 147 IVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPNFSIPQANHSHSGDYHCTGNIGYTLYSS 206
Query: 184 ETVNITI 190
+ V IT+
Sbjct: 207 KPVTITV 213
>gi|126116592 Fc fragment of IgG, low affinity IIc, receptor [Homo
sapiens]
Length = 323
Score = 171 bits (434), Expect = 4e-43
Identities = 89/187 (47%), Positives = 115/187 (61%)
Query: 4 LLLPTALLLLVSAGMRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHN 63
+LL TA+L L PKAV+ LEPQW VL++DSVTL C+G +SPE +S WFHN
Sbjct: 28 MLLWTAVLFLAPVAGTPAAPPKAVLKLEPQWINVLQEDSVTLTCRGTHSPESDSIPWFHN 87
Query: 64 ESLISSQASSYFIDAATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDP 123
+LI + + A +DSGEY CQT ++LSDPV L V WL+LQ P F+E +
Sbjct: 88 GNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSLSDPVHLTVLSEWLVLQTPHLEFQEGET 147
Query: 124 IHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLFGSKNVSS 183
I LRCHSWK+ L KVT+ QNGK +K+ + +F IP+A SG Y C G G SS
Sbjct: 148 IVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPNFSIPQANHSHSGDYHCTGNIGYTLYSS 207
Query: 184 ETVNITI 190
+ V IT+
Sbjct: 208 KPVTITV 214
>gi|10835133 Fc fragment of IgG, high affinity Ia, receptor (CD64)
[Homo sapiens]
Length = 374
Score = 167 bits (424), Expect = 6e-42
Identities = 94/233 (40%), Positives = 131/233 (56%), Gaps = 10/233 (4%)
Query: 1 MWQLLLPTALLLLVSAGMRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQW 60
MW L T LLL V + D KAV+ L+P W V ++++VTL C+ + P +STQW
Sbjct: 1 MWFL---TTLLLWVPVDGQV-DTTKAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQW 56
Query: 61 FHNESLISSQASSYFIDAATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKE 120
F N + + SY I +A+V+DSGEYRCQ LS SDP+QLE+H GWLLLQ VF E
Sbjct: 57 FLNGTATQTSTPSYRITSASVNDSGEYRCQRGLSGRSDPIQLEIHRGWLLLQVSSRVFTE 116
Query: 121 EDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLFGSKN 180
+P+ LRCH+WK+ ++ V Y +NGK K+FH NS+ I K + +G+Y C G+ G
Sbjct: 117 GEPLALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNISHNGTYHCSGM-GKHR 175
Query: 181 VSSETVNITITQ-----GLAVSTISSFFPPGYQVSFCLVMVLLFAVDTGLYFS 228
+S +++T+ + L S S C +LL LYFS
Sbjct: 176 YTSAGISVTVKELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFS 228
Score = 32.7 bits (73), Expect = 0.31
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 154 NSDFYIPKATLKDSGSYFCRGLFGSKNVSSETVNITI-TQGLAVSTISSFFPPGYQVSFC 212
+S++ I A +DSG Y+C NV + + + GL + T P + V F
Sbjct: 242 SSEYQILTARREDSGLYWCEAATEDGNVLKRSPELELQVLGLQLPT-----PVWFHVLFY 296
Query: 213 LVMVLLFAVDTGLYFSVKTNIR 234
L + ++F V+T L+ +++ ++
Sbjct: 297 LAVGIMFLVNTVLWVTIRKELK 318
>gi|4503675 Fc fragment of IgE, high affinity I, receptor for; alpha
polypeptide precursor [Homo sapiens]
Length = 257
Score = 162 bits (410), Expect = 3e-40
Identities = 93/229 (40%), Positives = 127/229 (55%), Gaps = 8/229 (3%)
Query: 5 LLPTALLLLVSAGMRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNE 64
LL ALL G+ K V L P W R+ + ++VTL C G E +ST+WFHN
Sbjct: 10 LLCVALLFFAPDGVLAVP-QKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNG 68
Query: 65 SLISSQASSYFIDAATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDPI 124
SL SS I A +DSGEY+CQ S+PV LEV WLLLQA V E P+
Sbjct: 69 SLSEETNSSLNIVNAKFEDSGEYKCQHQQVNESEPVYLEVFSDWLLLQASAEVVMEGQPL 128
Query: 125 HLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLFGSKNVSSE 184
LRCH W+N ++KV Y ++G+ KY++ N + I AT++DSG+Y+C G + SE
Sbjct: 129 FLRCHGWRNWDVYKVIYYKDGEALKYWYENHNISITNATVEDSGTYYCTGKVWQLDYESE 188
Query: 185 TVNITITQGLAVSTISSFFPPGYQVSFCLVMVLLFAVDTGLYFSVKTNI 233
+NIT+ + FF P L++V+LFAVDTGL+ S + +
Sbjct: 189 PLNITVIKAPREKYWLQFFIP-------LLVVILFAVDTGLFISTQQQV 230
>gi|50878302 Fc receptor-like B [Homo sapiens]
Length = 426
Score = 113 bits (283), Expect = 1e-25
Identities = 65/179 (36%), Positives = 94/179 (52%), Gaps = 14/179 (7%)
Query: 1 MWQLLLPTALLLLVSAGMRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSP-----ED 55
MW L TALLLLV + + L K ++ L P W + + + VTLKC G Y P +
Sbjct: 1 MWPL---TALLLLVPSSGQAATLEKPILSLHPPWTTIFKGERVTLKCDG-YHPLLLELQP 56
Query: 56 NSTQWFHNESLISSQASSYFIDAATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPR 115
ST W+ L+ S S V G YRCQT + +SDP+ L V WL+LQ P
Sbjct: 57 ISTLWYLGHLLLPSHKKSI-----EVQTPGVYRCQTRGAPVSDPIHLSVSNDWLILQVPY 111
Query: 116 WVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRG 174
E +P+ LRC W + ++K+ Y +G+ +YFH ++++ + +A DSG Y C G
Sbjct: 112 APVFEGEPLVLRCRGWYDKVVYKLHYYHDGQAVRYFHSSANYTVLQARASDSGRYQCSG 170
>gi|157694526 Fc receptor-like 5 [Homo sapiens]
Length = 977
Score = 107 bits (266), Expect = 1e-23
Identities = 89/269 (33%), Positives = 127/269 (47%), Gaps = 31/269 (11%)
Query: 4 LLLPTALLLLVSAGMRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQG--AYSPEDNSTQWF 61
+LL LL+L + P+ ++FL+P W V + + VTL C+G YSP+ T+W+
Sbjct: 1 MLLWVILLVLAPVSGQFARTPRPIIFLQPPWTTVFQGERVTLTCKGFRFYSPQ--KTKWY 58
Query: 62 H---NESLISSQASSYFIDAATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVF 118
H + ++ + V +SGEYRCQ S LS PV L+ L+LQAP VF
Sbjct: 59 HRYLGKEILRETPDNIL----EVQESGEYRCQAQGSPLSSPVHLDFSSASLILQAPLSVF 114
Query: 119 KEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLFGS 178
E D + LRC + L+ Y +N + + +DF+IP A LKD+G+Y C G S
Sbjct: 115 -EGDSVVLRCRAKAEVTLNNTIY-KNDNVLAFLNKRTDFHIPHACLKDNGAYRCTGYKES 172
Query: 179 -KNVSSETVNITITQGLA--VSTISSFFP-PGYQVSF-CLVMVLLFAVDT---------- 223
VSS TV I + + V SSF P G V+ C + L D
Sbjct: 173 CCPVSSNTVKIQVQEPFTRPVLRASSFQPISGNPVTLTCETQLSLERSDVPLRFRFFRDD 232
Query: 224 ---GLYFSVKTNIRSSTRDWKDHKFKWRK 249
GL +S+ N + + KD F W K
Sbjct: 233 QTLGLGWSLSPNFQITAMWSKDSGFYWCK 261
Score = 32.7 bits (73), Expect = 0.31
Identities = 40/181 (22%), Positives = 82/181 (45%), Gaps = 18/181 (9%)
Query: 37 VLEKDSVTLKCQGAYSPEDNSTQWFHNESLIS--SQASSYFIDAATVDDSGEYRC----Q 90
V E DSV L+C+ N+T + N+++++ ++ + + I A + D+G YRC +
Sbjct: 113 VFEGDSVVLRCRAKAEVTLNNTI-YKNDNVLAFLNKRTDFHIPHACLKDNGAYRCTGYKE 171
Query: 91 TNLSTLSDPVQLEVHIGWL--LLQAPRWVFKEEDPIHLRCHSWKNTALHKVT-----YLQ 143
+ S+ V+++V + +L+A + +P+ L C + + V +
Sbjct: 172 SCCPVSSNTVKIQVQEPFTRPVLRASSFQPISGNPVTLTCETQLSLERSDVPLRFRFFRD 231
Query: 144 NGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLFGSKNVSSET----VNITITQGLAVSTI 199
+ + + +F I KDSG Y+C+ +V S++ + + I V T+
Sbjct: 232 DQTLGLGWSLSPNFQITAMWSKDSGFYWCKAATMPYSVISDSPRSWIQVQIPASHPVLTL 291
Query: 200 S 200
S
Sbjct: 292 S 292
Score = 29.3 bits (64), Expect = 3.5
Identities = 38/192 (19%), Positives = 73/192 (38%), Gaps = 17/192 (8%)
Query: 27 VVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHN-----ESLISSQASSYFIDAATV 81
V+ L P+ E VTL C+ +++H + + + + T
Sbjct: 288 VLTLSPEKALNFEGTKVTLHCETQEDSLRTLYRFYHEGVPLRHKSVRCERGASISFSLTT 347
Query: 82 DDSGEYRCQTNLSTLSDP-------VQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNT 134
++SG Y C + + P V + V L L +P + E + L C + + +
Sbjct: 348 ENSGNYYCTADNGLGAKPSKAVSLSVTVPVSHPVLNLSSPEDLIFEGAKVTLHCEAQRGS 407
Query: 135 ALHKVTYLQNGKGRKYFHHNSDFYIP---KATLKDSGSYFCR--GLFGSKNVSSETVNIT 189
+ G + NS + T + SG+Y+C FG + + ++++T
Sbjct: 408 LPILYQFHHEGAALERRSANSAGGVAISFSLTAEHSGNYYCTADNGFGPQRSKAVSLSVT 467
Query: 190 ITQGLAVSTISS 201
+ V T+SS
Sbjct: 468 VPVSHPVLTLSS 479
Score = 28.1 bits (61), Expect = 7.7
Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 16/158 (10%)
Query: 60 WFHNESLISSQASS------YFIDAATVDDSGEYRCQTNL---STLSDPVQLEVHIGW-- 108
WF++E + + S+ F + T + SG Y C+ + + S+ V L+V +
Sbjct: 692 WFYHEDVTLGKISAPSGGGASFNLSLTTEHSGIYSCEADNGLEAQRSEMVTLKVAVPVSR 751
Query: 109 --LLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGK--GRKYFHHNSDFYIPKATL 164
L L+AP D + L C + + + L + G + T
Sbjct: 752 PVLTLRAPGTHAAVGDLLELHCEALRGSPLILYRFFHEDVTLGNRSSPSGGASLNLSLTA 811
Query: 165 KDSGSYFCRGLFGSKNVSSETVNITITQGLAVSTISSF 202
+ SG+Y C G SETV + IT GL + F
Sbjct: 812 EHSGNYSCEADNGLGAQRSETVTLYIT-GLTANRSGPF 848
>gi|219804014 Fc fragment of IgG, high affinity Ib, receptor (CD64)
isoform b [Homo sapiens]
Length = 188
Score = 89.4 bits (220), Expect = 3e-18
Identities = 45/128 (35%), Positives = 74/128 (57%), Gaps = 6/128 (4%)
Query: 107 GWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKD 166
GWLLLQ VF E +P+ LRCH+WK+ ++ V Y +NGK K+FH NS+ I K +
Sbjct: 11 GWLLLQVSSRVFMEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNISH 70
Query: 167 SGSYFCRGLFGSKNVSSETVNITITQGLAVSTISSFFPPGYQVSFCLVMVLLFAVDTGLY 226
+G+Y C G+ G +S ++ +GL + T P + V F L + ++F V+T L+
Sbjct: 71 NGTYHCSGM-GKHRYTSAGISQYTVKGLQLPT-----PVWFHVLFYLAVGIMFLVNTVLW 124
Query: 227 FSVKTNIR 234
+++ ++
Sbjct: 125 VTIRKELK 132
>gi|21314764 Fc receptor-like 3 precursor [Homo sapiens]
Length = 734
Score = 81.6 bits (200), Expect = 6e-16
Identities = 53/170 (31%), Positives = 83/170 (48%), Gaps = 8/170 (4%)
Query: 4 LLLPTALLLLVSAGMRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQG-AYSPEDNSTQWFH 62
+LL LL+L ++ PKAV+ L P W + + V L C ++S T W+H
Sbjct: 1 MLLWLLLLILTPGREQSGVAPKAVLLLNPPWSTAFKGEKVALICSSISHSLAQGDTYWYH 60
Query: 63 NESLISSQASSYFIDAATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKEED 122
+E L+ + D + + G Y+C+T S+LSD V +E WL+LQA VF E D
Sbjct: 61 DEKLLKIKH-----DKIQITEPGNYQCKTRGSSLSDAVHVEFSPDWLILQALHPVF-EGD 114
Query: 123 PIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFC 172
+ LRC N H+ Y ++GK + +N + + +D+ Y C
Sbjct: 115 NVILRCQGKDNKNTHQKVYYKDGK-QLPNSYNLEKITVNSVSRDNSKYHC 163
Score = 34.7 bits (78), Expect = 0.082
Identities = 56/234 (23%), Positives = 97/234 (41%), Gaps = 32/234 (13%)
Query: 19 RTEDLPKAV-VFLEPQW------YRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQA 71
R L AV V P W + V E D+V L+CQG + + ++ + + +
Sbjct: 85 RGSSLSDAVHVEFSPDWLILQALHPVFEGDNVILRCQGKDNKNTHQKVYYKDGKQLPN-- 142
Query: 72 SSYFIDAATVD----DSGEYRCQT-------NLSTLSDPVQLEVHIGWL--LLQAPRWVF 118
SY ++ TV+ D+ +Y C ++ S P+ ++V +L +L+A
Sbjct: 143 -SYNLEKITVNSVSRDNSKYHCTAYRKFYILDIEVTSKPLNIQVQELFLHPVLRASSSTP 201
Query: 119 KEEDPIHLRCHSWKNTALHKVTYLQNGKGRKY------FHHNSDFYIPKATLKDSGSYFC 172
E P+ L C + + V LQ R + + IP +DSGSY+C
Sbjct: 202 IEGSPMTLTCETQLSPQRPDVQ-LQFSLFRDSQTLGLGWSRSPRLQIPAMWTEDSGSYWC 260
Query: 173 RGLFGSKNVSSETVNITI-TQGLAVSTIS-SFFPPGYQVSFCLVMVLLFAVDTG 224
+ ++ ++ I Q + VS ++ P G Q+ MVL+ +V G
Sbjct: 261 EVETVTHSIKKRSLRSQIRVQRVPVSNVNLEIRPTGGQLIEGENMVLICSVAQG 314
>gi|14550416 Fc receptor-like 4 precursor [Homo sapiens]
Length = 515
Score = 79.3 bits (194), Expect = 3e-15
Identities = 58/181 (32%), Positives = 85/181 (46%), Gaps = 11/181 (6%)
Query: 4 LLLPTALLLLVSAGMRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHN 63
+LL +LL ++ K V+ + P W + + VTL C G T W+H
Sbjct: 1 MLLWASLLAFAPVCGQSAAAHKPVISVHPPWTTFFKGERVTLTCNGFQFYATEKTTWYHR 60
Query: 64 ----ESLISSQASSYFIDAATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFK 119
E L + ++ V +SG YRCQ S S+PV+L L+LQAP VF
Sbjct: 61 HYWGEKLTLTPGNTL-----EVRESGLYRCQARGSPRSNPVRLLFSSDSLILQAPYSVF- 114
Query: 120 EEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLFGSK 179
E D + LRCH + L V Y NG + + D IP+A+ ++G+Y C G +G +
Sbjct: 115 EGDTLVLRCHRRRKEKLTAVKYTWNGNILSISNKSWDLLIPQASSNNNGNYRCIG-YGDE 173
Query: 180 N 180
N
Sbjct: 174 N 174
Score = 31.2 bits (69), Expect = 0.91
Identities = 49/205 (23%), Positives = 84/205 (40%), Gaps = 24/205 (11%)
Query: 39 EKDSVTLKCQGAYSPEDNST----QWFHNESLISSQASSY-FIDAATV--DDSGEYRC-- 89
E +SV L C+ PE + T +F + +I S S+Y + TV ++SG Y C
Sbjct: 204 EGNSVNLSCETQLPPERSDTPLHFNFFRDGEVILSDWSTYPELQLPTVWRENSGSYWCGA 263
Query: 90 ---QTNLSTLSDPVQLEVH---IGWLLL--QAPRWVFKEEDPIHLRCHSWKNTALHKVTY 141
+ N+ S +Q+ V + +LL Q E + + L C + T ++
Sbjct: 264 ETVRGNIHKHSPSLQIHVQRIPVSGVLLETQPSGGQAVEGEMLVLVCSVAEGTGDTTFSW 323
Query: 142 ----LQNGKGRKYFHH-NSDFYIPKATLKDSGSYFCRGLFGSKNVSSETVNITI--TQGL 194
+Q GRK ++ +P +G Y+C V S +N+T+ T G
Sbjct: 324 HREDMQESLGRKTQRSLRAELELPAIRQSHAGGYYCTADNSYGPVQSMVLNVTVRETPGN 383
Query: 195 AVSTISSFFPPGYQVSFCLVMVLLF 219
+++ G + L + LLF
Sbjct: 384 RDGLVAAGATGGLLSALLLAVALLF 408
>gi|69885149 Fc receptor-like and mucin-like 1 [Homo sapiens]
Length = 376
Score = 63.9 bits (154), Expect = 1e-10
Identities = 47/161 (29%), Positives = 68/161 (42%), Gaps = 22/161 (13%)
Query: 44 TLKCQGAYSPEDNSTQWFHNESLISSQASSYFIDAATVDDSGEYRCQTNLSTLSDPVQLE 103
TL+C+G E++S H E ++ D+ E Q T S+P L
Sbjct: 49 TLQCEGPVCTEESSC---HTEDDLT--------------DAREAGFQVKAYTFSEPFHLI 91
Query: 104 VHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKAT 163
V WL+LQ P E D + LRC +W++ L +VT+ ++G N +F I
Sbjct: 92 VSYDWLILQGPAKPVFEGDLLVLRCQAWQDWPLTQVTFYRDGSALGPPGPNREFSITVVQ 151
Query: 164 LKDSGSYFCRGLFGSKNVSSETVNITITQGLAVSTISSFFP 204
DSG Y C G+F S I T + T+ FP
Sbjct: 152 KADSGHYHCSGIF-----QSPGPGIPETASVVAITVQELFP 187
Score = 32.0 bits (71), Expect = 0.53
Identities = 42/192 (21%), Positives = 73/192 (38%), Gaps = 19/192 (9%)
Query: 37 VLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQASS--YFIDAATVDDSGEYRCQ---- 90
V E D + L+CQ ++ + S + + + I DSG Y C
Sbjct: 106 VFEGDLLVLRCQAWQDWPLTQVTFYRDGSALGPPGPNREFSITVVQKADSGHYHCSGIFQ 165
Query: 91 -------TNLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHS----WKNTALHKV 139
S ++ VQ E+ +L P + P+ L C + ++ A
Sbjct: 166 SPGPGIPETASVVAITVQ-ELFPAPILRAVPSAEPQAGSPMTLSCQTKLPLQRSAARLLF 224
Query: 140 TYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLFGSKNVSSETVNITI-TQGLAVST 198
++ ++G+ + +S+F IP A+ SGSY+C V ++ + I QG + S
Sbjct: 225 SFYKDGRIVQSRGLSSEFQIPTASEDHSGSYWCEAATEDNQVWKQSPQLEIRVQGASSSA 284
Query: 199 ISSFFPPGYQVS 210
P Q S
Sbjct: 285 APPTLNPAPQKS 296
>gi|157057547 Fc receptor-like 6 [Homo sapiens]
Length = 434
Score = 53.9 bits (128), Expect = 1e-07
Identities = 35/99 (35%), Positives = 46/99 (46%), Gaps = 7/99 (7%)
Query: 108 WLLLQA-PRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKD 166
WL LQA P VF E D + LRC WKNT L +V + ++GK + N + AT++
Sbjct: 19 WLYLQAWPNPVF-EGDALTLRCQGWKNTPLSQVKFYRDGKFLHFSKENQTLSMGAATVQS 77
Query: 167 SGSYFCRGLFGSKNVSSETVNITITQGLAVSTISSFFPP 205
G Y C G V T T A+ + FPP
Sbjct: 78 RGQYSCSG-----QVMYIPQTFTQTSETAMVQVQELFPP 111
Score = 37.7 bits (86), Expect = 0.010
Identities = 44/185 (23%), Positives = 81/185 (43%), Gaps = 21/185 (11%)
Query: 4 LLLPTALLLLVSAGMRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHN 63
+LL TA+LL V +T L +L+ V E D++TL+CQG + + +++ +
Sbjct: 1 MLLWTAVLLFVPCVGKTVWL-----YLQAWPNPVFEGDALTLRCQGWKNTPLSQVKFYRD 55
Query: 64 ESLI--SSQASSYFIDAATVDDSGEYRCQ-------TNLSTLSDPVQLEVHIGW---LLL 111
+ S + + + AATV G+Y C + S+ ++V + +L
Sbjct: 56 GKFLHFSKENQTLSMGAATVQSRGQYSCSGQVMYIPQTFTQTSETAMVQVQELFPPPVLS 115
Query: 112 QAPRWVFKEEDPIHLRC----HSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDS 167
P +E + LRC H ++ ++ ++G + + + IP A DS
Sbjct: 116 AIPSPEPREGSLVTLRCQTKLHPLRSALRLLFSFHKDGHTLQDRGPHPELCIPGAKEGDS 175
Query: 168 GSYFC 172
G Y+C
Sbjct: 176 GLYWC 180
>gi|19923629 Fc receptor-like 2 precursor [Homo sapiens]
Length = 508
Score = 50.8 bits (120), Expect = 1e-06
Identities = 38/100 (38%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Query: 109 LLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSG 168
L L AP VF E D I L+C +N + K+ Y ++ K F SDF I A L DSG
Sbjct: 20 LTLVAPSSVF-EGDSIVLKCQGEQNWKIQKMAYHKDNKELSVFKKFSDFLIQSAVLSDSG 78
Query: 169 SYFC--RGLFGSKNVSSETVNITITQ--GLAVSTISSFFP 204
+YFC +G + +S V I + + V T SSF P
Sbjct: 79 NYFCSTKGQLFLWDKTSNIVKIKVQELFQRPVLTASSFQP 118
Score = 44.7 bits (104), Expect = 8e-05
Identities = 48/204 (23%), Positives = 89/204 (43%), Gaps = 16/204 (7%)
Query: 37 VLEKDSVTLKCQGAYSPEDNSTQWFHNESLIS--SQASSYFIDAATVDDSGEYRCQTN-- 92
V E DS+ LKCQG + + + + +S + S + I +A + DSG Y C T
Sbjct: 28 VFEGDSIVLKCQGEQNWKIQKMAYHKDNKELSVFKKFSDFLIQSAVLSDSGNYFCSTKGQ 87
Query: 93 ---LSTLSDPVQLEVH--IGWLLLQAPRWVFKEEDPIHLRCHS-----WKNTALHKVTYL 142
S+ V+++V +L A + E P+ L+C + + L +
Sbjct: 88 LFLWDKTSNIVKIKVQELFQRPVLTASSFQPIEGGPVSLKCETRLSPQRLDVQLQFCFFR 147
Query: 143 QNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLFGSKNVSSETVNITI-TQGLAVSTIS- 200
+N + + + I +D+GSY+C+ + + +++ I Q + +S +S
Sbjct: 148 ENQVLGSGWSSSPELQISAVWSEDTGSYWCKAETVTHRIRKQSLQSQIHVQRIPISNVSL 207
Query: 201 SFFPPGYQVSFCLVMVLLFAVDTG 224
PG QV+ ++LL +V G
Sbjct: 208 EIRAPGGQVTEGQKLILLCSVAGG 231
Score = 40.8 bits (94), Expect = 0.001
Identities = 41/178 (23%), Positives = 71/178 (39%), Gaps = 22/178 (12%)
Query: 35 YRVLEKDSVTLKCQGAYSPEDNSTQ----WFHNESLISSQASS---YFIDAATVDDSGEY 87
++ +E V+LKC+ SP+ Q +F ++ S SS I A +D+G Y
Sbjct: 116 FQPIEGGPVSLKCETRLSPQRLDVQLQFCFFRENQVLGSGWSSSPELQISAVWSEDTGSY 175
Query: 88 RCQTNLST---LSDPVQLEVHIGW-------LLLQAPRWVFKEEDPIHLRCHSWKNTALH 137
C+ T +Q ++H+ L ++AP E + L C T
Sbjct: 176 WCKAETVTHRIRKQSLQSQIHVQRIPISNVSLEIRAPGGQVTEGQKLILLCSVAGGTGNV 235
Query: 138 KVTYLQNGKGRKYFHH-----NSDFYIPKATLKDSGSYFCRGLFGSKNVSSETVNITI 190
++ + G +++ IP D+G Y+CR G + S+ VNI +
Sbjct: 236 TFSWYREATGTSMGKKTQRSLSAELEIPAVKESDAGKYYCRADNGHVPIQSKVVNIPV 293
>gi|40255013 carcinoembryonic antigen-related cell adhesion molecule
6 (non-specific cross reacting antigen) [Homo sapiens]
Length = 344
Score = 45.4 bits (106), Expect = 5e-05
Identities = 41/174 (23%), Positives = 77/174 (44%), Gaps = 23/174 (13%)
Query: 37 VLEKDSVTLKCQGAYSPEDNSTQ---WFHNESL-------ISSQASSYFIDAATVDDSGE 86
V +KD+V C+ PE +T W + +SL +S+ + + + +D+G
Sbjct: 157 VEDKDAVAFTCE----PEVQNTTYLWWVNGQSLPVSPRLQLSNGNMTLTLLSVKRNDAGS 212
Query: 87 YRCQTN---LSTLSDPVQLEVHIG--WLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTY 141
Y C+ + SDPV L V G + + ++ + ++L CH+ N + ++
Sbjct: 213 YECEIQNPASANRSDPVTLNVLYGPDGPTISPSKANYRPGENLNLSCHAASNPPA-QYSW 271
Query: 142 LQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLFGSKNVSSETVNITITQGLA 195
NG + + +IP T+ +SGSY C+ + ++ TV + G A
Sbjct: 272 FINGT---FQQSTQELFIPNITVNNSGSYMCQAHNSATGLNRTTVTMITVSGSA 322
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 43.5 bits (101), Expect = 2e-04
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 29/193 (15%)
Query: 15 SAGMRTEDLPKAVVFLEPQWYRVLEKDSVT-LKCQGAYSPEDNSTQWFHNESLI--SSQA 71
SA + ++ P+ + LEP R++++D T +C+ SPE W+ +E+ I SS+
Sbjct: 7296 SAQLGVQEPPRFIKKLEPS--RIVKQDEFTRYECKIGGSPEIK-VLWYKDETEIQESSKF 7352
Query: 72 SSYFIDAA--------TVDDSGEYRCQTN--LSTLSDPVQLEVHIGWLLLQAPRWV--FK 119
F+D+ +V+DSG+Y C+ + + S L+V + + P + K
Sbjct: 7353 RMSFVDSVAVLEMHNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPIFRKKPHPIETLK 7412
Query: 120 EEDPIHLRCHSWKNTALHKVTY-----LQNGKGRKYFHHN--SDFYIPKATLKDSGSYFC 172
D +HL C H Y L++GK K N + +I D G Y C
Sbjct: 7413 GAD-VHLECELQGTPPFHVSWYKDKRELRSGKKYKIMSENFLTSIHILNVDAADIGEYQC 7471
Query: 173 RGLFGSKNVSSET 185
+ + +V S+T
Sbjct: 7472 K---ATNDVGSDT 7481
Score = 37.4 bits (85), Expect = 0.013
Identities = 49/200 (24%), Positives = 86/200 (43%), Gaps = 29/200 (14%)
Query: 13 LVSAGMRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLIS---- 68
+ SA + ++ PK V LE + +S+ L+C+ + SPE WF N+S +
Sbjct: 6353 MCSAQLSVKEPPKFVKKLEASKV-AKQGESIQLECKISGSPEIK-VSWFRNDSELHESWK 6410
Query: 69 ------SQASSYFIDAATVDDSGEYRCQTN--LSTLSDPVQLEVHIGWLLLQAPRWV--F 118
+ + I+ A+ +DSG+Y C+ + + S L V + Q P V
Sbjct: 6411 YNMSFINSVALLTINEASAEDSGDYICEAHNGVGDASCSTALTVKAPPVFTQKPSPVGAL 6470
Query: 119 KEEDPIHLRCHSWKNTALHKVTYLQNGK---GRKYF-----HHNSDFYIPKATLKDSGSY 170
K D I L+C T +V ++++ K K F H ++ +I D G Y
Sbjct: 6471 KGSDVI-LQCEI-SGTPPFEVVWVKDRKQVRNSKKFKITSKHFDTSLHILNLEASDVGEY 6528
Query: 171 FCRGLFGSKNVSSETVNITI 190
C+ + V S+T + ++
Sbjct: 6529 HCK---ATNEVGSDTCSCSV 6545
Score = 36.6 bits (83), Expect = 0.022
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 25/128 (19%)
Query: 80 TVDDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDPI--------HLRCHSW 131
T+ D G Y C+ + +D Q E+ +++ P ++ KE +P+ HL C
Sbjct: 3614 TIQDRGVYSCKASNKFGADICQAEL----IIIDKPHFI-KELEPVQSAINKKVHLECQVD 3668
Query: 132 KNTALHKVTYLQNGK----GRKYFHHNSD----FYIPKATLKDSGSYFCRGLFGSKNVSS 183
++ + VT+ ++G+ G+ Y D IP A LKDSG+Y C S S
Sbjct: 3669 EDRKV-TVTWSKDGQKLPPGKDYKICFEDKIATLEIPLAKLKDSGTYVCT---ASNEAGS 3724
Query: 184 ETVNITIT 191
+ + T+T
Sbjct: 3725 SSCSATVT 3732
Score = 34.3 bits (77), Expect = 0.11
Identities = 50/186 (26%), Positives = 79/186 (42%), Gaps = 36/186 (19%)
Query: 15 SAGMRTEDLPKAVVFLEPQWYRVLEK-DSVTLKCQGAYSPEDNSTQWFHNESLI--SSQA 71
SA + ++ V LEP ++L+K D+ L C+ +P T WF N+ I SS+
Sbjct: 4290 SANLFVKEPATFVEKLEPS--QLLKKGDATQLACKVTGTPPIKIT-WFANDREIKESSKH 4346
Query: 72 SSYFIDAATV--------DDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRW------- 116
F+++ V +DSGEY C+ SD V ++ ++P +
Sbjct: 4347 RMSFVESTAVLRLTDVGIEDSGEYMCEAQNEAGSDHCSSIV----IVKESPYFTKEFKPI 4402
Query: 117 -VFKEEDPIHLRCHSWKNTALHKVTYLQNG----KGRKYFHHNSDFYIPKATLK----DS 167
V KE D + L T ++T+ ++ GRKY D + LK D+
Sbjct: 4403 EVLKEYDVMLLA--EVAGTPPFEITWFKDNTILRSGRKYKTFIQDHLVSLQILKFVAADA 4460
Query: 168 GSYFCR 173
G Y CR
Sbjct: 4461 GEYQCR 4466
Score = 33.1 bits (74), Expect = 0.24
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 12/102 (11%)
Query: 15 SAGMRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQAS-- 72
SA + + P V ++P Y +L +S L C+ SP T WF N +S +
Sbjct: 3728 SATVTVREPPSFVKKVDPS-YLMLPGESARLHCKLKGSPVIQVT-WFKNNKELSESNTVR 3785
Query: 73 SYFIDAAT--------VDDSGEYRCQTNLSTLSDPVQLEVHI 106
YF+++ V+DSG Y C+ SD E+ I
Sbjct: 3786 MYFVNSEAILDITDVKVEDSGSYSCEAVNDVGSDSCSTEIVI 3827
Score = 32.7 bits (73), Expect = 0.31
Identities = 44/161 (27%), Positives = 67/161 (41%), Gaps = 37/161 (22%)
Query: 37 VLEKDSVTLKCQGAYSPEDNSTQWFHNES--------LISSQASSYFIDA--ATVDDSGE 86
V E ++ T C+ S E WF N++ LISS+ ++ ++ T+DD +
Sbjct: 11585 VKEGETATFVCE--LSHEKMHVVWFKNDAKLHTSRTVLISSEGKTHKLEMKEVTLDDISQ 11642
Query: 87 YRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFK-------EEDPIHLRCHSWKNTALHKV 139
+ Q + LS QL+V L P + K E+D I L+C K+ V
Sbjct: 11643 IKAQ--VKELSSTAQLKV-----LEADPYFTVKLHDKTAVEKDEITLKCEVSKDVP---V 11692
Query: 140 TYLQNGK----GRKYFHHNSDFY----IPKATLKDSGSYFC 172
+ ++G+ KY I KA LKD G Y C
Sbjct: 11693 KWFKDGEEIVPSPKYSIKADGLRRILKIKKADLKDKGEYVC 11733
Score = 32.3 bits (72), Expect = 0.41
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 13/85 (15%)
Query: 20 TEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLI----------SS 69
T + P V LEP V DSV+L+CQ A +PE + W+ ++ + ++
Sbjct: 6075 TLEPPYFVTELEPLEAAV--GDSVSLQCQVAGTPE-ITVSWYKGDTKLRPTPEYRTYFTN 6131
Query: 70 QASSYFIDAATVDDSGEYRCQTNLS 94
++ + ++DSGEY C+ S
Sbjct: 6132 NVATLVFNKVNINDSGEYTCKAENS 6156
Score = 31.2 bits (69), Expect = 0.91
Identities = 31/124 (25%), Positives = 50/124 (40%), Gaps = 18/124 (14%)
Query: 76 IDAATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKEE-------DPIHLRC 128
I ++TV+D+G+Y C ++ D ++ L+L+ P +V + E D L+C
Sbjct: 7927 IPSSTVEDAGQYNCYIENASGKDSCSAQI----LILEPPYFVKQLEPVKVSVGDSASLQC 7982
Query: 129 HSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATL-------KDSGSYFCRGLFGSKNV 181
+ Y + K R + F ATL DSG Y C+ V
Sbjct: 7983 QLAGTPEIGVSWYKGDTKLRPTTTYKMHFRNNVATLVFNQVDINDSGEYICKAENSVGEV 8042
Query: 182 SSET 185
S+ T
Sbjct: 8043 SAST 8046
Score = 30.0 bits (66), Expect = 2.0
Identities = 43/174 (24%), Positives = 66/174 (37%), Gaps = 31/174 (17%)
Query: 23 LPKAVVFLEPQW-YRVLEKDSVTLKCQGAYSPEDNSTQWFHNES---------LISSQAS 72
+P V FL P +V EK+ +C+ S E+ +WF + + +IS A
Sbjct: 12370 VPPHVEFLRPLTDLQVREKEMARFECE--LSRENAKVKWFKDGAEIKKGKKYDIISKGAV 12427
Query: 73 SYF-IDAATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSW 131
I+ +DD EY C+ + S + + E D I L C
Sbjct: 12428 RILVINKCLLDDEAEYSCEVRTARTSGMLTVLEEEAVFTKNLANIEVSETDTIKLVCEVS 12487
Query: 132 KNTALHKVTY------LQNGK------GRKYFHHNSDFYIPKATLKDSGSYFCR 173
K A + Y ++ G+ GRK I A L+D+G+Y CR
Sbjct: 12488 KPGA-EVIWYKGDEEIIETGRYEILTEGRKRI-----LVIQNAHLEDAGNYNCR 12535
Score = 28.5 bits (62), Expect = 5.9
Identities = 26/118 (22%), Positives = 46/118 (38%), Gaps = 19/118 (16%)
Query: 83 DSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKEE--------DPIHLRCHSWKNT 134
DSG+Y CQ D ++ + + P++V K E + I L C +
Sbjct: 6337 DSGQYTCQATNDVGKDMCSAQLSVK----EPPKFVKKLEASKVAKQGESIQLECKISGSP 6392
Query: 135 ALHKVTYLQNGKGRKYFHHNSDFY-------IPKATLKDSGSYFCRGLFGSKNVSSET 185
+ + + + + + +N F I +A+ +DSG Y C G + S T
Sbjct: 6393 EIKVSWFRNDSELHESWKYNMSFINSVALLTINEASAEDSGDYICEAHNGVGDASCST 6450
Score = 28.5 bits (62), Expect = 5.9
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 23 LPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISS 69
L A + +P+ +V D+ TL+C A +PE ST+WF + ++S
Sbjct: 7583 LEPATIVEKPESIKVTTGDTCTLECTVAGTPE-LSTKWFKDGKELTS 7628
>gi|68161541 carcinoembryonic antigen-related cell adhesion molecule
1 isoform 2 precursor [Homo sapiens]
Length = 464
Score = 43.5 bits (101), Expect = 2e-04
Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 26/171 (15%)
Query: 37 VLEKDSVTLKCQGAYSPEDNSTQ---WFHNESL-------ISSQASSYFIDAATVDDSGE 86
V +KD+V C+ PE T W +N+SL +S+ + + + T +D+G
Sbjct: 157 VEDKDAVAFTCE----PETQDTTYLWWINNQSLPVSPRLQLSNGNRTLTLLSVTRNDTGP 212
Query: 87 YRCQTN---LSTLSDPVQLEVHIG--WLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTY 141
Y C+ + SDPV L V G + ++ + L C++ N + ++
Sbjct: 213 YECEIQNPVSANRSDPVTLNVTYGPDTPTISPSDTYYRPGANLSLSCYAASNPPA-QYSW 271
Query: 142 LQNGKGRKYFHHNSDFYIPKATLKDSGSYFC---RGLFGSKNVSSETVNIT 189
L NG + + +IP T+ +SGSY C + G + +T+ +T
Sbjct: 272 LINGT---FQQSTQELFIPNITVNNSGSYTCHANNSVTGCNRTTVKTIIVT 319
>gi|19923195 carcinoembryonic antigen-related cell adhesion molecule
1 isoform 1 precursor [Homo sapiens]
Length = 526
Score = 43.5 bits (101), Expect = 2e-04
Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 26/171 (15%)
Query: 37 VLEKDSVTLKCQGAYSPEDNSTQ---WFHNESL-------ISSQASSYFIDAATVDDSGE 86
V +KD+V C+ PE T W +N+SL +S+ + + + T +D+G
Sbjct: 157 VEDKDAVAFTCE----PETQDTTYLWWINNQSLPVSPRLQLSNGNRTLTLLSVTRNDTGP 212
Query: 87 YRCQTN---LSTLSDPVQLEVHIG--WLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTY 141
Y C+ + SDPV L V G + ++ + L C++ N + ++
Sbjct: 213 YECEIQNPVSANRSDPVTLNVTYGPDTPTISPSDTYYRPGANLSLSCYAASNPPA-QYSW 271
Query: 142 LQNGKGRKYFHHNSDFYIPKATLKDSGSYFC---RGLFGSKNVSSETVNIT 189
L NG + + +IP T+ +SGSY C + G + +T+ +T
Sbjct: 272 LINGT---FQQSTQELFIPNITVNNSGSYTCHANNSVTGCNRTTVKTIIVT 319
>gi|98986445 carcinoembryonic antigen-related cell adhesion molecule
5 preproprotein [Homo sapiens]
Length = 702
Score = 43.5 bits (101), Expect = 2e-04
Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 24/181 (13%)
Query: 37 VLEKDSVTLKCQGAYSPEDNSTQ---WFHNESL-------ISSQASSYFIDAATVDDSGE 86
V ++D+V L C+ PE +T W +N+SL +S+ + + + T +D G
Sbjct: 335 VEDEDAVALTCE----PEIQNTTYLWWVNNQSLPVSPRLQLSNDNRTLTLLSVTRNDVGP 390
Query: 87 YRC--QTNLST-LSDPVQLEVHIGW--LLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTY 141
Y C Q LS SDPV L V G + ++ + L CH+ N + ++
Sbjct: 391 YECGIQNKLSVDHSDPVILNVLYGPDDPTISPSYTYYRPGVNLSLSCHAASNPPA-QYSW 449
Query: 142 LQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLFGSKNVSSETV-NITITQGLAVSTIS 200
L +G ++ H + +I T K+SG Y C+ + S TV IT++ L +IS
Sbjct: 450 LIDGNIQQ---HTQELFISNITEKNSGLYTCQANNSASGHSRTTVKTITVSAELPKPSIS 506
Query: 201 S 201
S
Sbjct: 507 S 507
Score = 40.8 bits (94), Expect = 0.001
Identities = 44/173 (25%), Positives = 75/173 (43%), Gaps = 30/173 (17%)
Query: 37 VLEKDSVTLKCQGAYSPEDNSTQ---WFHNESL-------ISSQASSYFIDAATVDDSGE 86
V +KD+V C+ PE W +N+SL +S+ + + T +D+
Sbjct: 157 VEDKDAVAFTCE----PETQDATYLWWVNNQSLPVSPRLQLSNGNRTLTLFNVTRNDTAS 212
Query: 87 YRCQTN---LSTLSDPVQLEVHIGWLLLQAP-----RWVFKEEDPIHLRCHSWKNTALHK 138
Y+C+T + SD V L V G AP ++ + ++L CH+ N +
Sbjct: 213 YKCETQNPVSARRSDSVILNVLYG---PDAPTISPLNTSYRSGENLNLSCHAASNPPA-Q 268
Query: 139 VTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLFGSKNVSSETVNITIT 191
++ NG + + +IP T+ +SGSY C+ ++ TV TIT
Sbjct: 269 YSWFVNGT---FQQSTQELFIPNITVNNSGSYTCQAHNSDTGLNRTTVT-TIT 317
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.134 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,817,157
Number of Sequences: 37866
Number of extensions: 410153
Number of successful extensions: 1470
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 91
Number of HSP's that attempted gapping in prelim test: 1192
Number of HSP's gapped (non-prelim): 323
length of query: 254
length of database: 18,247,518
effective HSP length: 100
effective length of query: 154
effective length of database: 14,460,918
effective search space: 2226981372
effective search space used: 2226981372
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.