Guide to the Human Genome
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Name: LOC100292420 Sequence: fasta or formatted (103aa) NCBI GI: 239758047
Description:

PREDICTED: similar to hCG2039165

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9          5           2
 C cysteine            1.9          2           1
 D aspartate           6.8          7           2
 E glutamate           7.8          8           1
 F phenylalanine       2.9          3           1
 G glycine             3.9          4           1
 H histidine           1.9          2           1
 I isoleucine          3.9          4           1
 K lysine              6.8          7           1
 L leucine             8.7          9           1
 M methionine          1.9          2           1
 N asparagine          3.9          4           1
 P proline             3.9          4           1
 Q glutamine           5.8          6           1
 R arginine            4.9          5           1
 S serine             10.7         11           2
 T threonine           6.8          7           1
 V valine              6.8          7           2
 W tryptophan          1.9          2           1
 Y tyrosine            3.9          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to hCG2039165 
FCGR3A                0.872   Fc fragment of IgG, low affinity IIIa, receptor (CD...
FCGR3A                0.872   Fc fragment of IgG, low affinity IIIa, receptor (CD...
FCGR3A                0.872   Fc fragment of IgG, low affinity IIIa, receptor (CD1...
FCGR3B                0.840   low affinity immunoglobulin gamma Fc region recepto...
FCGR3A                0.834   Fc fragment of IgG, low affinity IIIa, receptor (CD...
FCGR3A                0.834   Fc fragment of IgG, low affinity IIIa, receptor (CD...
FCGR2B                0.380   Fc fragment of IgG, low affinity IIb, receptor isofo...
FCGR2B                0.380   Fc fragment of IgG, low affinity IIb, receptor isofo...
FCGR2B                0.380   Fc fragment of IgG, low affinity IIb, receptor isofo...
FCGR2B                0.380   Fc fragment of IgG, low affinity IIb, receptor isofo...
FCGR2A                0.374   Fc fragment of IgG, low affinity IIa, receptor isof...
FCGR2A                0.374   Fc fragment of IgG, low affinity IIa, receptor isofo...
FCGR2C                0.364   Fc fragment of IgG, low affinity IIc, receptor [Hom...
FCGR1A                0.358   Fc fragment of IgG, high affinity Ia, receptor (CD64...
FCGR1B                0.358   Fc fragment of IgG, high affinity Ib, receptor (CD64...
FCER1A                0.235   Fc fragment of IgE, high affinity I, receptor for; al...
FCRL5                 0.171   Fc receptor-like 5 
FCRL3                 0.144   Fc receptor-like 3 precursor 
FCRLB                 0.134   Fc receptor-like B 
FCRL4                 0.091   Fc receptor-like 4 precursor 
SIGLEC1               0.070   sialoadhesin precursor 
LOC100289760          0.059   PREDICTED: hypothetical protein XP_002347518, parti...
FCRL2                 0.059   Fc receptor-like 2 precursor 
CD22                  0.053   CD22 molecule 
LILRB4                0.053   leukocyte immunoglobulin-like receptor, subfamily B...
LILRB4                0.053   leukocyte immunoglobulin-like receptor, subfamily B...
LILRA2                0.048   leukocyte immunoglobulin-like receptor, subfamily A...
LILRA2                0.048   leukocyte immunoglobulin-like receptor, subfamily A (...
CEACAM20              0.043   carcinoembryonic antigen-related cell adhesion mole...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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