Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: FCGR1A Sequence: fasta or formatted (374aa) NCBI GI: 10835133
Description:

Fc fragment of IgG, high affinity Ia, receptor (CD64)

Referenced in:

Fc Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.7         14           2
 C cysteine            1.9          7           1
 D aspartate           2.7         10           1
 E glutamate           7.5         28           3
 F phenylalanine       3.5         13           2
 G glycine             6.4         24           1
 H histidine           3.2         12           1
 I isoleucine          3.2         12           1
 K lysine              5.6         21           3
 L leucine            13.6         51           3
 M methionine          1.1          4           1
 N asparagine          3.5         13           1
 P proline             4.0         15           2
 Q glutamine           5.1         19           1
 R arginine            5.1         19           2
 S serine              8.3         31           3
 T threonine           8.0         30           2
 V valine              7.5         28           1
 W tryptophan          2.9         11           1
 Y tyrosine            3.2         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Fc fragment of IgG, high affinity Ia, receptor (CD64... 
FCGR1B                0.487   Fc fragment of IgG, high affinity Ib, receptor (CD64...
FCGR1B                0.229   Fc fragment of IgG, high affinity Ib, receptor (CD6...
FCRLB                 0.223   Fc receptor-like B 
FCGR3A                0.198   Fc fragment of IgG, low affinity IIIa, receptor (CD...
FCGR3A                0.198   Fc fragment of IgG, low affinity IIIa, receptor (CD...
FCGR3B                0.194   low affinity immunoglobulin gamma Fc region recepto...
FCGR3A                0.192   Fc fragment of IgG, low affinity IIIa, receptor (CD...
FCGR3A                0.192   Fc fragment of IgG, low affinity IIIa, receptor (CD...
FCGR3A                0.192   Fc fragment of IgG, low affinity IIIa, receptor (CD1...
FCGR2A                0.192   Fc fragment of IgG, low affinity IIa, receptor isofo...
FCGR2B                0.192   Fc fragment of IgG, low affinity IIb, receptor isofo...
FCGR2B                0.189   Fc fragment of IgG, low affinity IIb, receptor isofo...
FCGR2A                0.186   Fc fragment of IgG, low affinity IIa, receptor isof...
FCGR2B                0.186   Fc fragment of IgG, low affinity IIb, receptor isofo...
FCGR2B                0.184   Fc fragment of IgG, low affinity IIb, receptor isofo...
FCGR2C                0.181   Fc fragment of IgG, low affinity IIc, receptor [Hom...
FCRL5                 0.178   Fc receptor-like 5 
FCRL4                 0.175   Fc receptor-like 4 precursor 
FCRLA                 0.174   Fc receptor-like and mucin-like 1 
FCER1A                0.166   Fc fragment of IgE, high affinity I, receptor for; al...
FCRL3                 0.161   Fc receptor-like 3 precursor 
FCRL6                 0.147   Fc receptor-like 6 
FCRL2                 0.096   Fc receptor-like 2 precursor 
LOC100292420          0.090   PREDICTED: similar to hCG2039165 
TTN                   0.046   titin isoform N2-A 
CEACAM1               0.039   carcinoembryonic antigen-related cell adhesion molec...
CEACAM1               0.039   carcinoembryonic antigen-related cell adhesion molec...
CD22                  0.038   CD22 molecule 
SIGLEC1               0.036   sialoadhesin precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press