Guide to the Human Genome
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Name: TMEM182 Sequence: fasta or formatted (229aa) NCBI GI: 188528658
Description:

transmembrane protein 182

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2         21           2
 C cysteine            2.2          5           1
 D aspartate           2.6          6           1
 E glutamate           3.5          8           2
 F phenylalanine       9.6         22           2
 G glycine             8.3         19           3
 H histidine           3.5          8           2
 I isoleucine          6.6         15           2
 K lysine              2.6          6           1
 L leucine            10.9         25           2
 M methionine          3.1          7           1
 N asparagine          4.4         10           1
 P proline             3.1          7           2
 Q glutamine           1.3          3           1
 R arginine            2.6          6           1
 S serine              7.0         16           1
 T threonine           2.6          6           1
 V valine              8.3         19           2
 W tryptophan          3.9          9           1
 Y tyrosine            4.8         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 182 
SLC22A9               0.033   solute carrier family 22 (organic anion/cation trans...
CACNG7                0.024   voltage-dependent calcium channel gamma-7 subunit [H...
LOC100294023          0.018   PREDICTED: hypothetical protein 
LOC100290508          0.018   PREDICTED: hypothetical protein XP_002346946 
LOC100289187          0.018   PREDICTED: hypothetical protein XP_002342783 
LOC100289187          0.018   PREDICTED: hypothetical protein 
CACNG2                0.018   voltage-dependent calcium channel gamma-2 subunit [Ho...
B4GALNT1              0.009   beta-1,4-N-acetyl-galactosaminyl transferase 1 
CCNE2                 0.009   cyclin E2 
PMP22                 0.009   peripheral myelin protein 22 
PMP22                 0.009   peripheral myelin protein 22 
PMP22                 0.009   peripheral myelin protein 22 
LOC100292609          0.007   PREDICTED: hypothetical protein 
LOC100289626          0.007   PREDICTED: hypothetical protein 
LOC100289626          0.007   PREDICTED: hypothetical protein XP_002342509 
SIDT1                 0.007   SID1 transmembrane family, member 1 
PAX1                  0.007   paired box 1 
CLDND2                0.007   claudin domain containing 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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