Guide to the Human Genome
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Name: POLD2 Sequence: fasta or formatted (469aa) NCBI GI: 187828568
Description:

DNA-directed DNA polymerase delta 2

Referenced in:

DNA Polymerases

Other entries for this name:
alt mRNA [469aa] DNA-directed DNA polymerase delta 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         31           2
 C cysteine            2.3         11           2
 D aspartate           5.5         26           3
 E glutamate           5.3         25           2
 F phenylalanine       4.7         22           1
 G glycine             7.5         35           5
 H histidine           2.3         11           1
 I isoleucine          3.6         17           2
 K lysine              3.6         17           2
 L leucine            11.9         56           2
 M methionine          1.5          7           1
 N asparagine          2.6         12           2
 P proline             7.5         35           2
 Q glutamine           5.5         26           2
 R arginine            4.5         21           1
 S serine              7.7         36           2
 T threonine           6.6         31           1
 V valine              7.5         35           2
 W tryptophan          0.4          2           1
 Y tyrosine            2.8         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DNA-directed DNA polymerase delta 2 
POLD2                 1.000   DNA-directed DNA polymerase delta 2 
DCTN1                 0.007   dynactin 1 isoform 4 
DCTN1                 0.007   dynactin 1 isoform 3 
DCTN1                 0.007   dynactin 1 isoform 2 
DCTN1                 0.007   dynactin 1 isoform 1 
TSNARE1               0.005   t-SNARE domain containing 1 
TCHH                  0.005   trichohyalin 
ADARB1                0.004   RNA-specific adenosine deaminase B1 isoform 7 [Homo...
ADARB1                0.004   RNA-specific adenosine deaminase B1 isoform 3 
ADARB1                0.004   RNA-specific adenosine deaminase B1 isoform 2 
ADARB1                0.004   RNA-specific adenosine deaminase B1 isoform 1 
RUSC2                 0.004   RUN and SH3 domain containing 2 
RUSC2                 0.004   RUN and SH3 domain containing 2 
ZC3H4                 0.004   zinc finger CCCH-type containing 4 
VPS13C                0.004   vacuolar protein sorting 13C protein isoform 1A [Hom...
VPS13C                0.004   vacuolar protein sorting 13C protein isoform 1B [Hom...
VPS13C                0.004   vacuolar protein sorting 13C protein isoform 2B [Hom...
VPS13C                0.004   vacuolar protein sorting 13C protein isoform 2A [Hom...
TM4SF18               0.004   transmembrane 4 L six family member 18 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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