Guide to the Human Genome
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Search of human proteins with 18644730

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|18644730 inhibitor of growth family, member 5 [Homo sapiens]
         (240 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|18644730 inhibitor of growth family, member 5 [Homo sapiens]       501   e-142
gi|189083821 inhibitor of growth family, member 4 isoform 9 [Hom...   354   3e-98
gi|38201670 inhibitor of growth family, member 4 isoform 1 [Homo...   348   2e-96
gi|189083826 inhibitor of growth family, member 4 isoform 3 [Hom...   345   2e-95
gi|189083828 inhibitor of growth family, member 4 isoform 4 [Hom...   344   3e-95
gi|189083830 inhibitor of growth family, member 4 isoform 5 [Hom...   298   3e-81
gi|189083832 inhibitor of growth family, member 4 isoform 6 [Hom...   215   3e-56
gi|38201667 inhibitor of growth family, member 1 isoform A [Homo...   180   9e-46
gi|4504695 inhibitor of growth family, member 2 [Homo sapiens]        172   3e-43
gi|38201661 inhibitor of growth family, member 1 isoform D [Homo...   148   5e-36
gi|38201663 inhibitor of growth family, member 1 isoform C [Homo...   147   1e-35
gi|38201665 inhibitor of growth family, member 1 isoform B [Homo...   145   2e-35
gi|38201655 inhibitor of growth family, member 3 isoform 1 [Homo...   111   6e-25
gi|38201659 inhibitor of growth family, member 3 isoform 3 [Homo...    66   2e-11
gi|151301171 RNA polymerase II transcription factor TAFII140 [Ho...    49   4e-06
gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo ...    47   2e-05
gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo ...    47   2e-05
gi|51599156 chromodomain helicase DNA binding protein 4 [Homo sa...    45   4e-05
gi|52630326 chromodomain helicase DNA binding protein 3 isoform ...    44   1e-04
gi|52630322 chromodomain helicase DNA binding protein 3 isoform ...    44   1e-04
gi|158420731 chromodomain helicase DNA binding protein 3 isoform...    44   1e-04
gi|13699811 WHSC1L1 protein isoform long [Homo sapiens]                44   1e-04
gi|156142182 CXXC finger 1 (PHD domain) isoform 1 [Homo sapiens]       44   2e-04
gi|156142180 CXXC finger 1 (PHD domain) isoform 2 [Homo sapiens]       44   2e-04
gi|34335264 zinc finger, MYND-type containing 8 isoform c [Homo ...    43   3e-04
gi|27477095 nuclear receptor binding SET domain protein 1 isofor...    42   4e-04
gi|19923586 nuclear receptor binding SET domain protein 1 isofor...    42   4e-04
gi|156546894 BRAF35/HDAC2 complex isoform a [Homo sapiens]             42   5e-04
gi|24308089 chromodomain helicase DNA binding protein 5 [Homo sa...    42   6e-04
gi|4557293 autoimmune regulator isoform 2 [Homo sapiens]               39   0.004

>gi|18644730 inhibitor of growth family, member 5 [Homo sapiens]
          Length = 240

 Score =  501 bits (1289), Expect = e-142
 Identities = 240/240 (100%), Positives = 240/240 (100%)

Query: 1   MATAMYLEHYLDSIENLPCELQRNFQLMRELDQRTEDKKAEIDILAAEYISTVKTLSPDQ 60
           MATAMYLEHYLDSIENLPCELQRNFQLMRELDQRTEDKKAEIDILAAEYISTVKTLSPDQ
Sbjct: 1   MATAMYLEHYLDSIENLPCELQRNFQLMRELDQRTEDKKAEIDILAAEYISTVKTLSPDQ 60

Query: 61  RVERLQKIQNAYSKCKEYSDDKVQLAMQTYEMVDKHIRRLDADLARFEADLKDKMEGSDF 120
           RVERLQKIQNAYSKCKEYSDDKVQLAMQTYEMVDKHIRRLDADLARFEADLKDKMEGSDF
Sbjct: 61  RVERLQKIQNAYSKCKEYSDDKVQLAMQTYEMVDKHIRRLDADLARFEADLKDKMEGSDF 120

Query: 121 ESSGGRGLKKGRGQKEKRGSRGRGRRTSEEDTPKKKKHKGGSEFTDTILSVHPSDVLDMP 180
           ESSGGRGLKKGRGQKEKRGSRGRGRRTSEEDTPKKKKHKGGSEFTDTILSVHPSDVLDMP
Sbjct: 121 ESSGGRGLKKGRGQKEKRGSRGRGRRTSEEDTPKKKKHKGGSEFTDTILSVHPSDVLDMP 180

Query: 181 VDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCPRCVQEKRKKK 240
           VDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCPRCVQEKRKKK
Sbjct: 181 VDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCPRCVQEKRKKK 240


>gi|189083821 inhibitor of growth family, member 4 isoform 9 [Homo
           sapiens]
          Length = 249

 Score =  354 bits (909), Expect = 3e-98
 Identities = 174/249 (69%), Positives = 203/249 (81%), Gaps = 10/249 (4%)

Query: 1   MATAMYLEHYLDSIENLPCELQRNFQLMRELDQRTEDKKAEIDILAAEYISTVKTLSPDQ 60
           MA  MYLEHYLDSIENLP ELQRNFQLMR+LDQRTED KAEID LA EY+S+ ++LS ++
Sbjct: 1   MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEE 60

Query: 61  RVERLQKIQNAYSKCKEYSDDKVQLAMQTYEMVDKHIRRLDADLARFEADLKDK-MEGSD 119
           ++  L++IQ AY KCKE+ DDKVQLAMQTYEMVDKHIRRLD DLARFEADLK+K +E SD
Sbjct: 61  KLALLKQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIESSD 120

Query: 120 FESSGGRGLKKGRGQKEKRGSRGRGR-RTSEEDTPKKKKHK-----GGSEF---TDTILS 170
           ++SS  +G KKGR QKEK+ +R R + + S+E+ PK  + K        E+   + T  S
Sbjct: 121 YDSSSSKGKKKGRTQKEKKAARARSKGKNSDEEAPKTAQKKLKLVRTSPEYGMPSVTFGS 180

Query: 171 VHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCP 230
           VHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDC IEWFHFACV LTTKP+GKWFCP
Sbjct: 181 VHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCP 240

Query: 231 RCVQEKRKK 239
           RC QE++KK
Sbjct: 241 RCSQERKKK 249


>gi|38201670 inhibitor of growth family, member 4 isoform 1 [Homo
           sapiens]
          Length = 248

 Score =  348 bits (893), Expect = 2e-96
 Identities = 173/249 (69%), Positives = 202/249 (81%), Gaps = 11/249 (4%)

Query: 1   MATAMYLEHYLDSIENLPCELQRNFQLMRELDQRTEDKKAEIDILAAEYISTVKTLSPDQ 60
           MA  MYLEHYLDSIENLP ELQRNFQLMR+LDQRTED KAEID LA EY+S+ ++LS ++
Sbjct: 1   MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEE 60

Query: 61  RVERLQKIQNAYSKCKEYSDDKVQLAMQTYEMVDKHIRRLDADLARFEADLKDK-MEGSD 119
           ++  L++IQ AY KCKE+ DDKVQLAMQTYEMVDKHIRRLD DLARFEADLK+K +E SD
Sbjct: 61  KLALLKQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIESSD 120

Query: 120 FESSGGRGLKKGRGQKEKRGSRGRGR-RTSEEDTPKKKKHK-----GGSEF---TDTILS 170
           ++SS  +G KK R QKEK+ +R R + + S+E+ PK  + K        E+   + T  S
Sbjct: 121 YDSSSSKG-KKSRTQKEKKAARARSKGKNSDEEAPKTAQKKLKLVRTSPEYGMPSVTFGS 179

Query: 171 VHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCP 230
           VHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDC IEWFHFACV LTTKP+GKWFCP
Sbjct: 180 VHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCP 239

Query: 231 RCVQEKRKK 239
           RC QE++KK
Sbjct: 240 RCSQERKKK 248


>gi|189083826 inhibitor of growth family, member 4 isoform 3 [Homo
           sapiens]
          Length = 246

 Score =  345 bits (885), Expect = 2e-95
 Identities = 172/249 (69%), Positives = 201/249 (80%), Gaps = 13/249 (5%)

Query: 1   MATAMYLEHYLDSIENLPCELQRNFQLMRELDQRTEDKKAEIDILAAEYISTVKTLSPDQ 60
           MA  MYLEHYLDSIENLP ELQRNFQLMR+LDQRTED KAEID LA EY+S+ ++LS ++
Sbjct: 1   MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEE 60

Query: 61  RVERLQKIQNAYSKCKEYSDDKVQLAMQTYEMVDKHIRRLDADLARFEADLKDK-MEGSD 119
           ++  L++IQ AY KCKE+ DDKVQLAMQTYEMVDKHIRRLD DLARFEADLK+K +E SD
Sbjct: 61  KLALLKQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIESSD 120

Query: 120 FESSGGRGLKKGRGQKEKRGSRGRGR-RTSEEDTPKKKKHK-----GGSEF---TDTILS 170
           ++SS     K+GR QKEK+ +R R + + S+E+ PK  + K        E+   + T  S
Sbjct: 121 YDSSSS---KEGRTQKEKKAARARSKGKNSDEEAPKTAQKKLKLVRTSPEYGMPSVTFGS 177

Query: 171 VHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCP 230
           VHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDC IEWFHFACV LTTKP+GKWFCP
Sbjct: 178 VHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCP 237

Query: 231 RCVQEKRKK 239
           RC QE++KK
Sbjct: 238 RCSQERKKK 246


>gi|189083828 inhibitor of growth family, member 4 isoform 4 [Homo
           sapiens]
          Length = 245

 Score =  344 bits (883), Expect = 3e-95
 Identities = 172/249 (69%), Positives = 200/249 (80%), Gaps = 14/249 (5%)

Query: 1   MATAMYLEHYLDSIENLPCELQRNFQLMRELDQRTEDKKAEIDILAAEYISTVKTLSPDQ 60
           MA  MYLEHYLDSIENLP ELQRNFQLMR+LDQRTED KAEID LA EY+S+ ++LS ++
Sbjct: 1   MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEE 60

Query: 61  RVERLQKIQNAYSKCKEYSDDKVQLAMQTYEMVDKHIRRLDADLARFEADLKDK-MEGSD 119
           ++  L++IQ AY KCKE+ DDKVQLAMQTYEMVDKHIRRLD DLARFEADLK+K +E SD
Sbjct: 61  KLALLKQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIESSD 120

Query: 120 FESSGGRGLKKGRGQKEKRGSRGRGR-RTSEEDTPKKKKHK-----GGSEF---TDTILS 170
           ++SS      KGR QKEK+ +R R + + S+E+ PK  + K        E+   + T  S
Sbjct: 121 YDSSS----SKGRTQKEKKAARARSKGKNSDEEAPKTAQKKLKLVRTSPEYGMPSVTFGS 176

Query: 171 VHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCP 230
           VHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDC IEWFHFACV LTTKP+GKWFCP
Sbjct: 177 VHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCP 236

Query: 231 RCVQEKRKK 239
           RC QE++KK
Sbjct: 237 RCSQERKKK 245


>gi|189083830 inhibitor of growth family, member 4 isoform 5 [Homo
           sapiens]
          Length = 225

 Score =  298 bits (763), Expect = 3e-81
 Identities = 151/249 (60%), Positives = 179/249 (71%), Gaps = 34/249 (13%)

Query: 1   MATAMYLEHYLDSIENLPCELQRNFQLMRELDQRTEDKKAEIDILAAEYISTVKTLSPDQ 60
           MA  MYLEHYLD++                        KAEID LA EY+S+ ++LS ++
Sbjct: 1   MAAGMYLEHYLDNL------------------------KAEIDKLATEYMSSARSLSSEE 36

Query: 61  RVERLQKIQNAYSKCKEYSDDKVQLAMQTYEMVDKHIRRLDADLARFEADLKDK-MEGSD 119
           ++  L++IQ AY KCKE+ DDKVQLAMQTYEMVDKHIRRLD DLARFEADLK+K +E SD
Sbjct: 37  KLALLKQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIESSD 96

Query: 120 FESSGGRGLKKGRGQKEKRGSRGRGR-RTSEEDTPKKKKHKGGSEFTD--------TILS 170
           ++SS  +G KKGR QKEK+ +R R + + S+E+ PK  + K     T         T  S
Sbjct: 97  YDSSSSKGKKKGRTQKEKKAARARSKGKNSDEEAPKTAQKKLKLVRTSPEYGMPSVTFGS 156

Query: 171 VHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCP 230
           VHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDC IEWFHFACV LTTKP+GKWFCP
Sbjct: 157 VHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCP 216

Query: 231 RCVQEKRKK 239
           RC QE++KK
Sbjct: 217 RCSQERKKK 225


>gi|189083832 inhibitor of growth family, member 4 isoform 6 [Homo
           sapiens]
          Length = 179

 Score =  215 bits (547), Expect = 3e-56
 Identities = 108/161 (67%), Positives = 132/161 (81%), Gaps = 2/161 (1%)

Query: 1   MATAMYLEHYLDSIENLPCELQRNFQLMRELDQRTEDKKAEIDILAAEYISTVKTLSPDQ 60
           MA  MYLEHYLDSIENLP ELQRNFQLMR+LDQRTED KAEID LA EY+S+ ++LS ++
Sbjct: 1   MAAGMYLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEE 60

Query: 61  RVERLQKIQNAYSKCKEYSDDKVQLAMQTYEMVDKHIRRLDADLARFEADLKDK-MEGSD 119
           ++  L++IQ AY KCKE+ DDKVQLAMQTYEMVDKHIRRLD DLARFEADLK+K +E SD
Sbjct: 61  KLALLKQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLKEKQIESSD 120

Query: 120 FESSGGRGLKKGRGQKEKRGSRGRGR-RTSEEDTPKKKKHK 159
           ++SS  +G KKGR QKEK+ +R R + + S+E+ PK  + K
Sbjct: 121 YDSSSSKGKKKGRTQKEKKAARARSKGKNSDEEAPKTAQKK 161


>gi|38201667 inhibitor of growth family, member 1 isoform A [Homo
           sapiens]
          Length = 279

 Score =  180 bits (457), Expect = 9e-46
 Identities = 99/254 (38%), Positives = 141/254 (55%), Gaps = 27/254 (10%)

Query: 6   YLEHYLDSIENLPCELQRNFQLMRELDQRTEDKKAEIDILAAEYISTVKTLSPDQRVERL 65
           Y+E YLDSIE+LP +LQRN  LMRE+D + ++   E+D     Y    +     Q+   L
Sbjct: 15  YVEDYLDSIESLPFDLQRNVSLMREIDAKYQEILKELDEC---YERFSRETDGAQKRRML 71

Query: 66  QKIQNAYSKCKEYSDDKVQLAMQTYEMVDKHIRRLDADLARFEADLKDKMEGSDFESSGG 125
             +Q A  + +E  D+K+Q+  Q  E+V+   R++D+ +  FEA  +    G    +SG 
Sbjct: 72  HCVQRALIRSQELGDEKIQIVSQMVELVENRTRQVDSHVELFEAQQE---LGDTAGNSGK 128

Query: 126 RGLKKGRGQ-------------KEKRGSRGRGRRTSEED-------TPKKKKHKGGSEFT 165
            G  + +G+             + +R +  R   +S  D       TPK+KK K   +  
Sbjct: 129 AGADRPKGEAAAQADKPNSKRSRRQRNNENRENASSNHDHDDGASGTPKEKKAKTSKKKK 188

Query: 166 DTILSVH-PSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPK 224
            +       +   D+P+DPNEPTYCLC+QVSYGEMIGCDN +CPIEWFHF+CV L  KPK
Sbjct: 189 RSKAKAEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLNHKPK 248

Query: 225 GKWFCPRCVQEKRK 238
           GKW+CP+C  E  K
Sbjct: 249 GKWYCPKCRGENEK 262


>gi|4504695 inhibitor of growth family, member 2 [Homo sapiens]
          Length = 280

 Score =  172 bits (435), Expect = 3e-43
 Identities = 89/241 (36%), Positives = 137/241 (56%), Gaps = 11/241 (4%)

Query: 6   YLEHYLDSIENLPCELQRNFQLMRELDQRTEDKKAEIDILAAEYISTVKTLSPDQRVERL 65
           Y++ YL+ +E+LP ++QRN  ++RELD + ++   EID +  +Y      L+  +R+++L
Sbjct: 27  YVQDYLECVESLPHDMQRNVSVLRELDNKYQETLKEIDDVYEKY-KKEDDLNQKKRLQQL 85

Query: 66  QKIQNAYSKCKEYSDDKVQLAMQTYEMVDKHIRRLDADLARFE-------ADLKDKMEGS 118
             +Q A    +E  D+K+Q+  Q  E+V+   R+++     F+       A  K KM+ S
Sbjct: 86  --LQRALINSQELGDEKIQIVTQMLELVENRARQMELHSQCFQDPAESERASDKAKMDSS 143

Query: 119 DFESSGGRGLKKGRGQKEKRGSRGRGRRTSEEDTPKKKKHKGGSEFTDT-ILSVHPSDVL 177
             E S  R  ++   +         G    ++  PK+KK K   +   +       +  +
Sbjct: 144 QPERSSRRPRRQRTSESRDLCHMANGIEDCDDQPPKEKKSKSAKKKKRSKAKQEREASPV 203

Query: 178 DMPVDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCPRCVQEKR 237
           +  +DPNEPTYCLC+QVSYGEMIGCDN  CPIEWFHF+CV LT KPKGKW+CP+C  +  
Sbjct: 204 EFAIDPNEPTYCLCNQVSYGEMIGCDNEQCPIEWFHFSCVSLTYKPKGKWYCPKCRGDNE 263

Query: 238 K 238
           K
Sbjct: 264 K 264


>gi|38201661 inhibitor of growth family, member 1 isoform D [Homo
           sapiens]
          Length = 422

 Score =  148 bits (373), Expect = 5e-36
 Identities = 84/234 (35%), Positives = 121/234 (51%), Gaps = 38/234 (16%)

Query: 26  QLMRELDQRTEDKKAEIDILAAEYISTVKTLSPDQRVERLQKIQNAYSKCKEYSDDKVQL 85
           Q+++ELD+  E    E D                Q+   L  +Q A  + +E  D+K+Q+
Sbjct: 189 QILKELDECYERFSRETD--------------GAQKRRMLHCVQRALIRSQELGDEKIQI 234

Query: 86  AMQTYEMVDKHIRRLDADLARFEADLKDKMEGSDFESSGGRGLKKGRGQ----------- 134
             Q  E+V+   R++D+ +  FEA  +    G    +SG  G  + +G+           
Sbjct: 235 VSQMVELVENRTRQVDSHVELFEAQQE---LGDTAGNSGKAGADRPKGEAAAQADKPNSK 291

Query: 135 --KEKRGSRGRGRRTSEED-------TPKKKKHKGGSEFTDTILSVH-PSDVLDMPVDPN 184
             + +R +  R   +S  D       TPK+KK K   +   +       +   D+P+DPN
Sbjct: 292 RSRRQRNNENRENASSNHDHDDGASGTPKEKKAKTSKKKKRSKAKAEREASPADLPIDPN 351

Query: 185 EPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCPRCVQEKRK 238
           EPTYCLC+QVSYGEMIGCDN +CPIEWFHF+CV L  KPKGKW+CP+C  E  K
Sbjct: 352 EPTYCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLNHKPKGKWYCPKCRGENEK 405


>gi|38201663 inhibitor of growth family, member 1 isoform C [Homo
           sapiens]
          Length = 235

 Score =  147 bits (370), Expect = 1e-35
 Identities = 77/200 (38%), Positives = 110/200 (55%), Gaps = 24/200 (12%)

Query: 60  QRVERLQKIQNAYSKCKEYSDDKVQLAMQTYEMVDKHIRRLDADLARFEADLKDKMEGSD 119
           Q+   L  +Q A  + +E  D+K+Q+  Q  E+V+   R++D+ +  FEA  +    G  
Sbjct: 22  QKRRMLHCVQRALIRSQELGDEKIQIVSQMVELVENRTRQVDSHVELFEAQQE---LGDT 78

Query: 120 FESSGGRGLKKGRGQ-------------KEKRGSRGRGRRTSEED-------TPKKKKHK 159
             +SG  G  + +G+             + +R +  R   +S  D       TPK+KK K
Sbjct: 79  AGNSGKAGADRPKGEAAAQADKPNSKRSRRQRNNENRENASSNHDHDDGASGTPKEKKAK 138

Query: 160 GGSEFTDTILSVH-PSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVD 218
              +   +       +   D+P+DPNEPTYCLC+QVSYGEMIGCDN +CPIEWFHF+CV 
Sbjct: 139 TSKKKKRSKAKAEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWFHFSCVG 198

Query: 219 LTTKPKGKWFCPRCVQEKRK 238
           L  KPKGKW+CP+C  E  K
Sbjct: 199 LNHKPKGKWYCPKCRGENEK 218


>gi|38201665 inhibitor of growth family, member 1 isoform B [Homo
           sapiens]
          Length = 210

 Score =  145 bits (367), Expect = 2e-35
 Identities = 76/195 (38%), Positives = 108/195 (55%), Gaps = 24/195 (12%)

Query: 65  LQKIQNAYSKCKEYSDDKVQLAMQTYEMVDKHIRRLDADLARFEADLKDKMEGSDFESSG 124
           L  +Q A  + +E  D+K+Q+  Q  E+V+   R++D+ +  FEA  +    G    +SG
Sbjct: 2   LHCVQRALIRSQELGDEKIQIVSQMVELVENRTRQVDSHVELFEAQQE---LGDTAGNSG 58

Query: 125 GRGLKKGRGQ-------------KEKRGSRGRGRRTSEED-------TPKKKKHKGGSEF 164
             G  + +G+             + +R +  R   +S  D       TPK+KK K   + 
Sbjct: 59  KAGADRPKGEAAAQADKPNSKRSRRQRNNENRENASSNHDHDDGASGTPKEKKAKTSKKK 118

Query: 165 TDTILSVH-PSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKP 223
             +       +   D+P+DPNEPTYCLC+QVSYGEMIGCDN +CPIEWFHF+CV L  KP
Sbjct: 119 KRSKAKAEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLNHKP 178

Query: 224 KGKWFCPRCVQEKRK 238
           KGKW+CP+C  E  K
Sbjct: 179 KGKWYCPKCRGENEK 193


>gi|38201655 inhibitor of growth family, member 3 isoform 1 [Homo
           sapiens]
          Length = 418

 Score =  111 bits (277), Expect = 6e-25
 Identities = 49/129 (37%), Positives = 68/129 (52%)

Query: 111 LKDKMEGSDFESSGGRGLKKGRGQKEKRGSRGRGRRTSEEDTPKKKKHKGGSEFTDTILS 170
           L      S  +S  GR  K       ++ S      +    +      +  S+ T  +  
Sbjct: 285 LTQNASSSAADSRSGRKSKNNNKSSSQQSSSSSSSSSLSSCSSSSTVVQEISQQTTVVPE 344

Query: 171 VHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCP 230
              +  +D   DPNEP YC+C+QVSYGEM+GCDN DCPIEWFH+ CV LT  PKGKW+CP
Sbjct: 345 SDSNSQVDWTYDPNEPRYCICNQVSYGEMVGCDNQDCPIEWFHYGCVGLTEAPKGKWYCP 404

Query: 231 RCVQEKRKK 239
           +C    +++
Sbjct: 405 QCTAAMKRR 413



 Score = 90.9 bits (224), Expect = 9e-19
 Identities = 52/164 (31%), Positives = 92/164 (56%), Gaps = 8/164 (4%)

Query: 5   MYLEHYLDSIENLPCELQRNFQLMRELDQRTEDKKAEIDILAAEYISTVKTLSPDQRVER 64
           +YLE YL+ IE LP +L+  F  MRE+D + ++   +++   +E+    K   P+ R E+
Sbjct: 2   LYLEDYLEMIEQLPMDLRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREEQ 61

Query: 65  LQKIQNAYSKCKEYSDDKVQLAMQTYEMVDKHIRRLDADLARFEADLKDKMEGSDFESSG 124
           +  I+  Y K  E +D+KVQLA Q Y++VD+H+R+LD +LA+F+ +L       + +++G
Sbjct: 62  MASIKKDYYKALEDADEKVQLANQIYDLVDRHLRKLDQELAKFKMEL-------EADNAG 114

Query: 125 GRGLKKGRGQKEKRGSRGRGRRTSEEDTP-KKKKHKGGSEFTDT 167
              + + R  +    S+      +   TP +K+K+   S  T T
Sbjct: 115 ITEILERRSLELDTPSQPVNNHHAHSHTPVEKRKYNPTSHHTTT 158


>gi|38201659 inhibitor of growth family, member 3 isoform 3 [Homo
          sapiens]
          Length = 92

 Score = 66.2 bits (160), Expect = 2e-11
 Identities = 32/88 (36%), Positives = 53/88 (60%)

Query: 5  MYLEHYLDSIENLPCELQRNFQLMRELDQRTEDKKAEIDILAAEYISTVKTLSPDQRVER 64
          +YLE YL+ IE LP +L+  F  MRE+D + ++   +++   +E+    K   P+ R E+
Sbjct: 2  LYLEDYLEMIEQLPMDLRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREEQ 61

Query: 65 LQKIQNAYSKCKEYSDDKVQLAMQTYEM 92
          +  I+  Y K  E +D+KVQLA Q Y++
Sbjct: 62 MASIKKDYYKALEDADEKVQLANQIYDL 89


>gi|151301171 RNA polymerase II transcription factor TAFII140 [Homo
           sapiens]
          Length = 929

 Score = 48.9 bits (115), Expect = 4e-06
 Identities = 20/44 (45%), Positives = 30/44 (68%), Gaps = 5/44 (11%)

Query: 199 MIGCDNPDCPIEWFHFACVDLTTKP--KGKWFCPRCVQEKRKKK 240
           MIGCD+ D   +W+H+ CV + T P  + +WFCP+C  +K+ KK
Sbjct: 880 MIGCDDCD---DWYHWPCVGIMTAPPEEMQWFCPKCANKKKDKK 920


>gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo
           sapiens]
          Length = 1188

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 12/155 (7%)

Query: 79  SDDKVQLAMQTYEMVDKHIRRLDADLARFEADLKDKMEGSDFESSGGRGLKKGRGQKEKR 138
           ++++++   +  E +D   R  D   A   A  K K       S+G           +K+
Sbjct: 7   AEEEIKTEQEVVEGMDISTRSKDPGSAERTAQ-KRKFPSPPHSSNGHSPQDTSTSPIKKK 65

Query: 139 GSRGRGRRTSEEDTPKKKKHKGGSEFTDTILSVHPSDVLDMPVDPNEPTYC-LCHQVSYG 197
              G     ++E +  +    G   +    L+  P DV+  P D     YC +CH+   G
Sbjct: 66  KKPGLLNSNNKEQSELRH---GPFYYMKQPLTTDPVDVV--PQDGRNDFYCWVCHRE--G 118

Query: 198 EMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCPRC 232
           +++ C+   CP   +H  C+ LT++P+G WFCP C
Sbjct: 119 QVLCCEL--CP-RVYHAKCLRLTSEPEGDWFCPEC 150


>gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo
           sapiens]
          Length = 1160

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 12/155 (7%)

Query: 79  SDDKVQLAMQTYEMVDKHIRRLDADLARFEADLKDKMEGSDFESSGGRGLKKGRGQKEKR 138
           ++++++   +  E +D   R  D   A   A  K K       S+G           +K+
Sbjct: 7   AEEEIKTEQEVVEGMDISTRSKDPGSAERTAQ-KRKFPSPPHSSNGHSPQDTSTSPIKKK 65

Query: 139 GSRGRGRRTSEEDTPKKKKHKGGSEFTDTILSVHPSDVLDMPVDPNEPTYC-LCHQVSYG 197
              G     ++E +  +    G   +    L+  P DV+  P D     YC +CH+   G
Sbjct: 66  KKPGLLNSNNKEQSELRH---GPFYYMKQPLTTDPVDVV--PQDGRNDFYCWVCHRE--G 118

Query: 198 EMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCPRC 232
           +++ C+   CP   +H  C+ LT++P+G WFCP C
Sbjct: 119 QVLCCEL--CP-RVYHAKCLRLTSEPEGDWFCPEC 150


>gi|51599156 chromodomain helicase DNA binding protein 4 [Homo
           sapiens]
          Length = 1912

 Score = 45.4 bits (106), Expect = 4e-05
 Identities = 35/100 (35%), Positives = 48/100 (48%), Gaps = 19/100 (19%)

Query: 139 GSRGRGRRTSEEDTPKKKKHKGGSEFTDTILSVHPSDVLDMPVDPNEPTYC-LCHQVSYG 197
           GS  R  R+ ++    KKK KG  E T   +  + +D  D         YC +C Q   G
Sbjct: 334 GSTSRSSRSRKKLRTTKKKKKGEEEVT--AVDGYETDHQD---------YCEVCQQG--G 380

Query: 198 EMIGCDNPDCPIEWFHFACVD--LTTKPKGKWFCPRCVQE 235
           E+I CD   CP   +H  C+D  +   P+GKW CP C +E
Sbjct: 381 EIILCDT--CP-RAYHMVCLDPDMEKAPEGKWSCPHCEKE 417



 Score = 34.7 bits (78), Expect = 0.076
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 5/46 (10%)

Query: 197 GEMIGCDNPDCPIEWFHFACVD--LTTKPKGKWFCPRCVQEKRKKK 240
           GE++ CD   CP   +H  C++  L   P G+W CPRC     K K
Sbjct: 459 GELLCCDT--CPSS-YHIHCLNPPLPEIPNGEWLCPRCTCPALKGK 501


>gi|52630326 chromodomain helicase DNA binding protein 3 isoform 1
           [Homo sapiens]
          Length = 2000

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 47/136 (34%), Positives = 57/136 (41%), Gaps = 37/136 (27%)

Query: 108 EADLKDKMEGSDFESSGGRGLKKGRGQKEKRGSRGRGRRTSEEDTPKKKKHKG-----GS 162
           EA+  D   GS   S+ GR     R +K KRG  GR          KKKK  G     G 
Sbjct: 320 EAEESDLDSGS-VHSASGRPDGPVRTKKLKRGRPGR----------KKKKVLGCPAVAGE 368

Query: 163 EFTDTILSVHPSDVLDMPVDPNEPTYC-LCHQVSYGEMIGCDNPDCPIEWFHFACVD--L 219
           E  D   + H               YC +C Q   GE+I CD   CP   +H  C+D  L
Sbjct: 369 EEVDGYETDHQD-------------YCEVCQQG--GEIILCDT--CP-RAYHLVCLDPEL 410

Query: 220 TTKPKGKWFCPRCVQE 235
              P+GKW CP C +E
Sbjct: 411 DRAPEGKWSCPHCEKE 426



 Score = 32.3 bits (72), Expect = 0.38
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 5/38 (13%)

Query: 197 GEMIGCDNPDCPIEWFHFACVD--LTTKPKGKWFCPRC 232
           GE++ CD     I  +H  C++  L   P G+W CPRC
Sbjct: 466 GELLCCD---ACISSYHIHCLNPPLPDIPNGEWLCPRC 500


>gi|52630322 chromodomain helicase DNA binding protein 3 isoform 2
           [Homo sapiens]
          Length = 1966

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 47/136 (34%), Positives = 57/136 (41%), Gaps = 37/136 (27%)

Query: 108 EADLKDKMEGSDFESSGGRGLKKGRGQKEKRGSRGRGRRTSEEDTPKKKKHKG-----GS 162
           EA+  D   GS   S+ GR     R +K KRG  GR          KKKK  G     G 
Sbjct: 320 EAEESDLDSGS-VHSASGRPDGPVRTKKLKRGRPGR----------KKKKVLGCPAVAGE 368

Query: 163 EFTDTILSVHPSDVLDMPVDPNEPTYC-LCHQVSYGEMIGCDNPDCPIEWFHFACVD--L 219
           E  D   + H               YC +C Q   GE+I CD   CP   +H  C+D  L
Sbjct: 369 EEVDGYETDHQD-------------YCEVCQQG--GEIILCDT--CP-RAYHLVCLDPEL 410

Query: 220 TTKPKGKWFCPRCVQE 235
              P+GKW CP C +E
Sbjct: 411 DRAPEGKWSCPHCEKE 426



 Score = 32.3 bits (72), Expect = 0.38
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 5/38 (13%)

Query: 197 GEMIGCDNPDCPIEWFHFACVD--LTTKPKGKWFCPRC 232
           GE++ CD     I  +H  C++  L   P G+W CPRC
Sbjct: 466 GELLCCD---ACISSYHIHCLNPPLPDIPNGEWLCPRC 500


>gi|158420731 chromodomain helicase DNA binding protein 3 isoform 3
           [Homo sapiens]
          Length = 2059

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 47/136 (34%), Positives = 57/136 (41%), Gaps = 37/136 (27%)

Query: 108 EADLKDKMEGSDFESSGGRGLKKGRGQKEKRGSRGRGRRTSEEDTPKKKKHKG-----GS 162
           EA+  D   GS   S+ GR     R +K KRG  GR          KKKK  G     G 
Sbjct: 379 EAEESDLDSGS-VHSASGRPDGPVRTKKLKRGRPGR----------KKKKVLGCPAVAGE 427

Query: 163 EFTDTILSVHPSDVLDMPVDPNEPTYC-LCHQVSYGEMIGCDNPDCPIEWFHFACVD--L 219
           E  D   + H               YC +C Q   GE+I CD   CP   +H  C+D  L
Sbjct: 428 EEVDGYETDHQD-------------YCEVCQQG--GEIILCDT--CP-RAYHLVCLDPEL 469

Query: 220 TTKPKGKWFCPRCVQE 235
              P+GKW CP C +E
Sbjct: 470 DRAPEGKWSCPHCEKE 485



 Score = 32.3 bits (72), Expect = 0.38
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 5/38 (13%)

Query: 197 GEMIGCDNPDCPIEWFHFACVD--LTTKPKGKWFCPRC 232
           GE++ CD     I  +H  C++  L   P G+W CPRC
Sbjct: 525 GELLCCD---ACISSYHIHCLNPPLPDIPNGEWLCPRC 559


>gi|13699811 WHSC1L1 protein isoform long [Homo sapiens]
          Length = 1437

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 1/34 (2%)

Query: 197  GEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCP 230
            GE++ CD  DCP + +H  C++LT  P GKW CP
Sbjct: 1331 GELVMCDKKDCP-KAYHLLCLNLTQPPYGKWECP 1363


>gi|156142182 CXXC finger 1 (PHD domain) isoform 1 [Homo sapiens]
          Length = 660

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 7/59 (11%)

Query: 184 NEPTYCLCHQVSYG-EMIGCDNPDCPIEWFHFACVDLT---TKPKGKWFCPRCVQEKRK 238
           N P YC+C +      MIGCDN +   EWFH  C+ +T    K   +W+C  C ++  K
Sbjct: 24  NAPIYCICRKPDINCFMIGCDNCN---EWFHGDCIRITEKMAKAIREWYCRECREKDPK 79


>gi|156142180 CXXC finger 1 (PHD domain) isoform 2 [Homo sapiens]
          Length = 656

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 7/59 (11%)

Query: 184 NEPTYCLCHQVSYG-EMIGCDNPDCPIEWFHFACVDLT---TKPKGKWFCPRCVQEKRK 238
           N P YC+C +      MIGCDN +   EWFH  C+ +T    K   +W+C  C ++  K
Sbjct: 24  NAPIYCICRKPDINCFMIGCDNCN---EWFHGDCIRITEKMAKAIREWYCRECREKDPK 79


>gi|34335264 zinc finger, MYND-type containing 8 isoform c [Homo
           sapiens]
          Length = 1135

 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 24/128 (18%)

Query: 112 KDKMEGSDFES------SGGRGLKKGRGQKEKRGSRGRGRRTSEEDTPKKKKHKGGSEFT 165
           ++ +EG D  +      S  R  +K +       S G   + +     KKKK  G     
Sbjct: 15  QEVVEGMDISTRSKDPGSAERTAQKRKFPSPPHSSNGHSPQDTSTSPIKKKKKPG----- 69

Query: 166 DTILSVHPSDVLDMPVDPNEPTYC-LCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPK 224
             +L+ +  +      D     YC +CH+   G+++ C+   CP   +H  C+ LT++P+
Sbjct: 70  --LLNSNNKEQ-----DGRNDFYCWVCHRE--GQVLCCEL--CP-RVYHAKCLRLTSEPE 117

Query: 225 GKWFCPRC 232
           G WFCP C
Sbjct: 118 GDWFCPEC 125


>gi|27477095 nuclear receptor binding SET domain protein 1 isoform a
            [Homo sapiens]
          Length = 2427

 Score = 42.4 bits (98), Expect = 4e-04
 Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)

Query: 197  GEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCP 230
            G+++ C  P CP + +H  C++LT +P GKW CP
Sbjct: 1859 GQLVSCKKPGCP-KVYHADCLNLTKRPAGKWECP 1891



 Score = 33.5 bits (75), Expect = 0.17
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)

Query: 197  GEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCPRC 232
            GE++ C+   C    FH  C+ LT  P+GK+ C  C
Sbjct: 1284 GELLLCEAQCCGA--FHLECLGLTEMPRGKFICNEC 1317



 Score = 29.6 bits (65), Expect = 2.4
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 4/41 (9%)

Query: 197  GEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCPRCVQEKR 237
            G ++ CD+  CP   FH  C+++   P+G W+C  C   K+
Sbjct: 1448 GSLLCCDS--CPAA-FHRECLNIDI-PEGNWYCNDCKAGKK 1484


>gi|19923586 nuclear receptor binding SET domain protein 1 isoform b
            [Homo sapiens]
          Length = 2696

 Score = 42.4 bits (98), Expect = 4e-04
 Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)

Query: 197  GEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCP 230
            G+++ C  P CP + +H  C++LT +P GKW CP
Sbjct: 2128 GQLVSCKKPGCP-KVYHADCLNLTKRPAGKWECP 2160



 Score = 33.5 bits (75), Expect = 0.17
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)

Query: 197  GEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCPRC 232
            GE++ C+   C    FH  C+ LT  P+GK+ C  C
Sbjct: 1553 GELLLCEAQCCGA--FHLECLGLTEMPRGKFICNEC 1586



 Score = 29.6 bits (65), Expect = 2.4
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 4/41 (9%)

Query: 197  GEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCPRCVQEKR 237
            G ++ CD+  CP   FH  C+++   P+G W+C  C   K+
Sbjct: 1717 GSLLCCDS--CPAA-FHRECLNIDI-PEGNWYCNDCKAGKK 1753


>gi|156546894 BRAF35/HDAC2 complex isoform a [Homo sapiens]
          Length = 680

 Score = 42.0 bits (97), Expect = 5e-04
 Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 7/97 (7%)

Query: 146 RTSEEDTPKKKKHKGGSEFTDTILSVHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNP 205
           ++S  D+P+ +K +    F   +  V          D +E    +C +   G+++ CD  
Sbjct: 449 QSSHPDSPENEKTETTFTFPAPVQPVSLPSPTSTDGDIHEDFCSVCRKS--GQLLMCDTC 506

Query: 206 DCPIEWFHFACVD--LTTKPKGKWFCPRCVQEKRKKK 240
                 +H  C+D  L T PKG W CPRC  +  KK+
Sbjct: 507 S---RVYHLDCLDPPLKTIPKGMWICPRCQDQMLKKE 540


>gi|24308089 chromodomain helicase DNA binding protein 5 [Homo
           sapiens]
          Length = 1954

 Score = 41.6 bits (96), Expect = 6e-04
 Identities = 40/139 (28%), Positives = 52/139 (37%), Gaps = 56/139 (40%)

Query: 112 KDKMEGSDFES------------SGGRGLKKGRGQKEKRGSRGRGRRTSEEDTPKKKKHK 159
           +D+ E SDF+S            S   G K  R +K+KR   G G  T  +D        
Sbjct: 293 EDEREESDFDSASIHSASVRSECSAALGKKSKRRRKKKRIDDGDGYETDHQD-------- 344

Query: 160 GGSEFTDTILSVHPSDVLDMPVDPNEPTYC-LCHQVSYGEMIGCDNPDCPIEWFHFACVD 218
                                       YC +C Q   GE+I CD   CP   +H  C+D
Sbjct: 345 ----------------------------YCEVCQQG--GEIILCDT--CP-RAYHLVCLD 371

Query: 219 --LTTKPKGKWFCPRCVQE 235
             L   P+GKW CP C +E
Sbjct: 372 PELEKAPEGKWSCPHCEKE 390



 Score = 33.9 bits (76), Expect = 0.13
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 5/46 (10%)

Query: 197 GEMIGCDNPDCPIEWFHFACVD--LTTKPKGKWFCPRCVQEKRKKK 240
           GE++ CD   CP   +H  C++  L   P G+W CPRC     K K
Sbjct: 426 GELLCCDA--CPSS-YHLHCLNPPLPEIPNGEWLCPRCTCPPLKGK 468


>gi|4557293 autoimmune regulator isoform 2 [Homo sapiens]
          Length = 348

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 36/112 (32%), Positives = 48/112 (42%), Gaps = 16/112 (14%)

Query: 131 GRGQKEKRGSRGRGRRTSEEDTPKKKKHKGGSEFTDTILS---VHPSDV---LDMPVDPN 184
           G+G+    GS G G+R     T   ++   GS F   +     +HPS V   +      N
Sbjct: 42  GQGRISGPGSMGAGQRLGSSGT---QRCCWGSCFGKEVALRRVLHPSPVCMGVSCLCQKN 98

Query: 185 EPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVD--LTTKPKGKWFCPRCVQ 234
           E    +C     GE+I CD   CP   FH AC+   L   P G W C  C+Q
Sbjct: 99  EDECAVCRDG--GELICCDG--CP-RAFHLACLSPPLREIPSGTWRCSSCLQ 145


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.134    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,756,793
Number of Sequences: 37866
Number of extensions: 463105
Number of successful extensions: 3255
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 142
Number of HSP's that attempted gapping in prelim test: 2824
Number of HSP's gapped (non-prelim): 508
length of query: 240
length of database: 18,247,518
effective HSP length: 99
effective length of query: 141
effective length of database: 14,498,784
effective search space: 2044328544
effective search space used: 2044328544
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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