Search of human proteins with 17978479

Search of human proteins with 17978479

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|17978479 vacuolar protein sorting 16 isoform 1 [Homo
sapiens]
         (839 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17978479 vacuolar protein sorting 16 isoform 1 [Homo sapiens]     1683   0.0  
gi|17978481 vacuolar protein sorting 16 isoform 3 [Homo sapiens]      782   0.0  
gi|20127607 hypothetical protein LOC63894 [Homo sapiens]               48   3e-05
gi|95147555 microtubule-associated protein 1A [Homo sapiens]           35   0.29 
gi|94400921 trypsin domain containing 1 isoform a [Homo sapiens]       32   2.5  
gi|53729339 mitochondrial translational initiation factor 2 prec...    32   3.2  
gi|53729337 mitochondrial translational initiation factor 2 prec...    32   3.2  
gi|29837648 cytochrome P450, family 4, subfamily X, polypeptide ...    32   3.2  
gi|58530842 desmoplakin isoform II [Homo sapiens]                      31   4.2  
gi|58530840 desmoplakin isoform I [Homo sapiens]                       31   4.2  
gi|20149635 p47 protein isoform a [Homo sapiens]                       31   4.2  
gi|94400923 trypsin domain containing 1 isoform b [Homo sapiens]       31   5.5  
gi|4504067 aspartate aminotransferase 1 [Homo sapiens]                 30   7.1  
gi|67944634 exocyst complex component 1 isoform 1 [Homo sapiens]       30   7.1  
gi|30410720 exocyst complex component 1 isoform 1 [Homo sapiens]       30   7.1  
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]     30   9.3  
gi|33286434 p47 protein isoform c [Homo sapiens]                       30   9.3  

>gi|17978479 vacuolar protein sorting 16 isoform 1 [Homo sapiens]
          Length = 839

 Score = 1683 bits (4358), Expect = 0.0
 Identities = 839/839 (100%), Positives = 839/839 (100%)

Query: 1   MDCYTANWNPLGDSAFYRKYELYSMDWDLKEELRDCLVAAAPYGGPIALLRNPWRKEKAA 60
           MDCYTANWNPLGDSAFYRKYELYSMDWDLKEELRDCLVAAAPYGGPIALLRNPWRKEKAA
Sbjct: 1   MDCYTANWNPLGDSAFYRKYELYSMDWDLKEELRDCLVAAAPYGGPIALLRNPWRKEKAA 60

Query: 61  SVRPVLDIYSASGMPLASLLWKSGPVVSLGWSAEEELLCVQEDGAVLVYGLHGDFRRHFS 120
           SVRPVLDIYSASGMPLASLLWKSGPVVSLGWSAEEELLCVQEDGAVLVYGLHGDFRRHFS
Sbjct: 61  SVRPVLDIYSASGMPLASLLWKSGPVVSLGWSAEEELLCVQEDGAVLVYGLHGDFRRHFS 120

Query: 121 MGNEVLQNRVLDARIFHTEFGSGVAILTGAHRFTLSANVGDLKLRRMPEVPGLQSAPSCW 180
           MGNEVLQNRVLDARIFHTEFGSGVAILTGAHRFTLSANVGDLKLRRMPEVPGLQSAPSCW
Sbjct: 121 MGNEVLQNRVLDARIFHTEFGSGVAILTGAHRFTLSANVGDLKLRRMPEVPGLQSAPSCW 180

Query: 181 TVLCQDRVAHILLAVGPDLYLLDHAACSAVTPPGLAPGVSSFLQMAVSFTYRHLALFTDT 240
           TVLCQDRVAHILLAVGPDLYLLDHAACSAVTPPGLAPGVSSFLQMAVSFTYRHLALFTDT
Sbjct: 181 TVLCQDRVAHILLAVGPDLYLLDHAACSAVTPPGLAPGVSSFLQMAVSFTYRHLALFTDT 240

Query: 241 GYIWMGTASLKEKLCEFNCNIRAPPKQMVWCSRPRSKERAVVVAWERRLMVVGDAPESIQ 300
           GYIWMGTASLKEKLCEFNCNIRAPPKQMVWCSRPRSKERAVVVAWERRLMVVGDAPESIQ
Sbjct: 241 GYIWMGTASLKEKLCEFNCNIRAPPKQMVWCSRPRSKERAVVVAWERRLMVVGDAPESIQ 300

Query: 301 FVLDEDSYLVPELDGVRIFSRSTHEFLHEVPAASEEIFKIASMAPGALLLEAQKEYEKES 360
           FVLDEDSYLVPELDGVRIFSRSTHEFLHEVPAASEEIFKIASMAPGALLLEAQKEYEKES
Sbjct: 301 FVLDEDSYLVPELDGVRIFSRSTHEFLHEVPAASEEIFKIASMAPGALLLEAQKEYEKES 360

Query: 361 QKADEYLREIQELGQLTQAVQQCIEAAGHEHQPDMQKSLLRAASFGKCFLDRFPPDSFVH 420
           QKADEYLREIQELGQLTQAVQQCIEAAGHEHQPDMQKSLLRAASFGKCFLDRFPPDSFVH
Sbjct: 361 QKADEYLREIQELGQLTQAVQQCIEAAGHEHQPDMQKSLLRAASFGKCFLDRFPPDSFVH 420

Query: 421 MCQDLRVLNAVRDYHIGIPLTYSQYKQLTIQVLLDRLVLRRLYPLAIQICEYLRLPEVQG 480
           MCQDLRVLNAVRDYHIGIPLTYSQYKQLTIQVLLDRLVLRRLYPLAIQICEYLRLPEVQG
Sbjct: 421 MCQDLRVLNAVRDYHIGIPLTYSQYKQLTIQVLLDRLVLRRLYPLAIQICEYLRLPEVQG 480

Query: 481 VSRILAHWACYKVQQKDVSDEDVARAINQKLGDTPGVSYSDIAARAYGCGRTELAIKLLE 540
           VSRILAHWACYKVQQKDVSDEDVARAINQKLGDTPGVSYSDIAARAYGCGRTELAIKLLE
Sbjct: 481 VSRILAHWACYKVQQKDVSDEDVARAINQKLGDTPGVSYSDIAARAYGCGRTELAIKLLE 540

Query: 541 YEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHLKNELNRGDFFMTLRNQPMA 600
           YEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHLKNELNRGDFFMTLRNQPMA
Sbjct: 541 YEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHLKNELNRGDFFMTLRNQPMA 600

Query: 601 LSLYRQFCKHQELETLKDLYNQDDNHQELGSFHIRASYAAEERIEGRVAALQTAADAFYK 660
           LSLYRQFCKHQELETLKDLYNQDDNHQELGSFHIRASYAAEERIEGRVAALQTAADAFYK
Sbjct: 601 LSLYRQFCKHQELETLKDLYNQDDNHQELGSFHIRASYAAEERIEGRVAALQTAADAFYK 660

Query: 661 AKNEFAAKATEDQMRLLRLQRRLEDELGGQFLDLSLHDTVTTLILGGHNKRAEQLARDFR 720
           AKNEFAAKATEDQMRLLRLQRRLEDELGGQFLDLSLHDTVTTLILGGHNKRAEQLARDFR
Sbjct: 661 AKNEFAAKATEDQMRLLRLQRRLEDELGGQFLDLSLHDTVTTLILGGHNKRAEQLARDFR 720

Query: 721 IPDKRLWWLKLTALADLEDWEELEKFSKSKKSPIGYLPFVEICMKQHNKYEAKKYASRVG 780
           IPDKRLWWLKLTALADLEDWEELEKFSKSKKSPIGYLPFVEICMKQHNKYEAKKYASRVG
Sbjct: 721 IPDKRLWWLKLTALADLEDWEELEKFSKSKKSPIGYLPFVEICMKQHNKYEAKKYASRVG 780

Query: 781 PEQKVKALLLVGDVAQAADVAIEHRNEAELSLVLSHCTGATDGATADKIQRARAQAQKK 839
           PEQKVKALLLVGDVAQAADVAIEHRNEAELSLVLSHCTGATDGATADKIQRARAQAQKK
Sbjct: 781 PEQKVKALLLVGDVAQAADVAIEHRNEAELSLVLSHCTGATDGATADKIQRARAQAQKK 839


>gi|17978481 vacuolar protein sorting 16 isoform 3 [Homo sapiens]
          Length = 695

 Score =  782 bits (2019), Expect = 0.0
 Identities = 396/396 (100%), Positives = 396/396 (100%)

Query: 444 QYKQLTIQVLLDRLVLRRLYPLAIQICEYLRLPEVQGVSRILAHWACYKVQQKDVSDEDV 503
           QYKQLTIQVLLDRLVLRRLYPLAIQICEYLRLPEVQGVSRILAHWACYKVQQKDVSDEDV
Sbjct: 300 QYKQLTIQVLLDRLVLRRLYPLAIQICEYLRLPEVQGVSRILAHWACYKVQQKDVSDEDV 359

Query: 504 ARAINQKLGDTPGVSYSDIAARAYGCGRTELAIKLLEYEPRSGEQVPLLLKMKRSKLALS 563
           ARAINQKLGDTPGVSYSDIAARAYGCGRTELAIKLLEYEPRSGEQVPLLLKMKRSKLALS
Sbjct: 360 ARAINQKLGDTPGVSYSDIAARAYGCGRTELAIKLLEYEPRSGEQVPLLLKMKRSKLALS 419

Query: 564 KAIESGDTDLVFTVLLHLKNELNRGDFFMTLRNQPMALSLYRQFCKHQELETLKDLYNQD 623
           KAIESGDTDLVFTVLLHLKNELNRGDFFMTLRNQPMALSLYRQFCKHQELETLKDLYNQD
Sbjct: 420 KAIESGDTDLVFTVLLHLKNELNRGDFFMTLRNQPMALSLYRQFCKHQELETLKDLYNQD 479

Query: 624 DNHQELGSFHIRASYAAEERIEGRVAALQTAADAFYKAKNEFAAKATEDQMRLLRLQRRL 683
           DNHQELGSFHIRASYAAEERIEGRVAALQTAADAFYKAKNEFAAKATEDQMRLLRLQRRL
Sbjct: 480 DNHQELGSFHIRASYAAEERIEGRVAALQTAADAFYKAKNEFAAKATEDQMRLLRLQRRL 539

Query: 684 EDELGGQFLDLSLHDTVTTLILGGHNKRAEQLARDFRIPDKRLWWLKLTALADLEDWEEL 743
           EDELGGQFLDLSLHDTVTTLILGGHNKRAEQLARDFRIPDKRLWWLKLTALADLEDWEEL
Sbjct: 540 EDELGGQFLDLSLHDTVTTLILGGHNKRAEQLARDFRIPDKRLWWLKLTALADLEDWEEL 599

Query: 744 EKFSKSKKSPIGYLPFVEICMKQHNKYEAKKYASRVGPEQKVKALLLVGDVAQAADVAIE 803
           EKFSKSKKSPIGYLPFVEICMKQHNKYEAKKYASRVGPEQKVKALLLVGDVAQAADVAIE
Sbjct: 600 EKFSKSKKSPIGYLPFVEICMKQHNKYEAKKYASRVGPEQKVKALLLVGDVAQAADVAIE 659

Query: 804 HRNEAELSLVLSHCTGATDGATADKIQRARAQAQKK 839
           HRNEAELSLVLSHCTGATDGATADKIQRARAQAQKK
Sbjct: 660 HRNEAELSLVLSHCTGATDGATADKIQRARAQAQKK 695



 Score =  622 bits (1603), Expect = e-178
 Identities = 300/301 (99%), Positives = 301/301 (100%)

Query: 1   MDCYTANWNPLGDSAFYRKYELYSMDWDLKEELRDCLVAAAPYGGPIALLRNPWRKEKAA 60
           MDCYTANWNPLGDSAFYRKYELYSMDWDLKEELRDCLVAAAPYGGPIALLRNPWRKEKAA
Sbjct: 1   MDCYTANWNPLGDSAFYRKYELYSMDWDLKEELRDCLVAAAPYGGPIALLRNPWRKEKAA 60

Query: 61  SVRPVLDIYSASGMPLASLLWKSGPVVSLGWSAEEELLCVQEDGAVLVYGLHGDFRRHFS 120
           SVRPVLDIYSASGMPLASLLWKSGPVVSLGWSAEEELLCVQEDGAVLVYGLHGDFRRHFS
Sbjct: 61  SVRPVLDIYSASGMPLASLLWKSGPVVSLGWSAEEELLCVQEDGAVLVYGLHGDFRRHFS 120

Query: 121 MGNEVLQNRVLDARIFHTEFGSGVAILTGAHRFTLSANVGDLKLRRMPEVPGLQSAPSCW 180
           MGNEVLQNRVLDARIFHTEFGSGVAILTGAHRFTLSANVGDLKLRRMPEVPGLQSAPSCW
Sbjct: 121 MGNEVLQNRVLDARIFHTEFGSGVAILTGAHRFTLSANVGDLKLRRMPEVPGLQSAPSCW 180

Query: 181 TVLCQDRVAHILLAVGPDLYLLDHAACSAVTPPGLAPGVSSFLQMAVSFTYRHLALFTDT 240
           TVLCQDRVAHILLAVGPDLYLLDHAACSAVTPPGLAPGVSSFLQMAVSFTYRHLALFTDT
Sbjct: 181 TVLCQDRVAHILLAVGPDLYLLDHAACSAVTPPGLAPGVSSFLQMAVSFTYRHLALFTDT 240

Query: 241 GYIWMGTASLKEKLCEFNCNIRAPPKQMVWCSRPRSKERAVVVAWERRLMVVGDAPESIQ 300
           GYIWMGTASLKEKLCEFNCNIRAPPKQMVWCSRPRSKERAVVVAWERRLMVVGDAPESIQ
Sbjct: 241 GYIWMGTASLKEKLCEFNCNIRAPPKQMVWCSRPRSKERAVVVAWERRLMVVGDAPESIQ 300

Query: 301 F 301
           +
Sbjct: 301 Y 301


>gi|20127607 hypothetical protein LOC63894 [Homo sapiens]
          Length = 493

 Score = 48.1 bits (113), Expect = 3e-05
 Identities = 74/311 (23%), Positives = 121/311 (38%), Gaps = 63/311 (20%)

Query: 505 RAINQKLGDTPGVSYSDIAARAYGCGRTELAIKLLEYEPRSGEQVP--LLLKMKRSKLA- 561
           ++++  L DTP  SY+    R  G           EY   S +  P   + ++++ K+  
Sbjct: 123 QSLSDALSDTPAKSYAPELGRPKG-----------EYRDYSNDWSPSDTVRRLRKGKVCS 171

Query: 562 -------------LSKAIESGDTDLVFTVLLHLKNELNRGDFFMTLRNQPMALSLYRQFC 608
                        L +A+   D +++  VL+ LK  L++   F  L  + +AL     F 
Sbjct: 172 LERFRSLQDKLQLLEEAVSMHDGNVITAVLIFLKRTLSKEILFRELEVRQVALRHLIHFL 231

Query: 609 KH-QELETLKDLYNQDDNHQELGSFHIRASYAAEERIEGRVAALQTAADAFYKAKNEFAA 667
           K   + + L DL+   D  +EL   H R     ++  + R   L+T     + A++   +
Sbjct: 232 KEIGDQKLLLDLFRFLDRTEELALSHYREHLNIQDP-DKRKEFLKTCVGLPFSAED---S 287

Query: 668 KATEDQMRLLRLQRRLED-----ELGGQFLDLSLHDT---------VTTLILGG--HNKR 711
              +D   LL  Q  +E      E  GQ      H           VTTL      H   
Sbjct: 288 AHIQDHYTLLERQIIIEANDRHLESAGQTEIFRKHPRKASILNMPLVTTLFYSCFYHYTE 347

Query: 712 AE-------QLARDFRIPDKRLWWLKLTALADLEDWEELEKFSKS--------KKSPIGY 756
           AE        L + F+IPDK+     L A A L  W +++    +        K++PIG+
Sbjct: 348 AEGTFSSPVNLKKTFKIPDKQYVLTALAARAKLRAWNDVDALFTTKNWLGYTKKRAPIGF 407

Query: 757 LPFVEICMKQH 767
              VEI  K +
Sbjct: 408 HRVVEILHKNN 418


>gi|95147555 microtubule-associated protein 1A [Homo sapiens]
          Length = 2803

 Score = 35.0 bits (79), Expect = 0.29
 Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 1/52 (1%)

Query: 351  EAQKEYEKESQKADEYLRE-IQELGQLTQAVQQCIEAAGHEHQPDMQKSLLR 401
            +AQ++ +K S+K D+ L +    LGQ  +A++Q I+A    HQ   Q+SL++
Sbjct: 1535 QAQEQKDKVSEKKDQALEQKYWALGQKDEALEQNIQALEENHQTQEQESLVQ 1586


>gi|94400921 trypsin domain containing 1 isoform a [Homo sapiens]
          Length = 566

 Score = 32.0 bits (71), Expect = 2.5
 Identities = 42/168 (25%), Positives = 64/168 (38%), Gaps = 33/168 (19%)

Query: 142 SGVAILTGAHRFTLSANVGDLKLRRMPEVPGLQSAPSCW--------TVLCQDRVAHILL 193
           +G  +LT A     +   G    R    +  L  AP CW        T+LC    A +  
Sbjct: 247 AGPLLLTDARCLPGTEGGGVFTARPAGALVALVVAPLCWKAGEWVGFTLLCA--AAPLFR 304

Query: 194 AVGPDLYLLDH--AACSAVTPPGLAPGVSSFLQMAVSFTYRHLALFTDTGYIWMGTASLK 251
           A    L+ L H  AA +A+ PP +  GV   L +             D+G +W   A L 
Sbjct: 305 AARDALHRLPHSTAALAALLPPEV--GVPWGLPLR------------DSGPLWAAAAVLV 350

Query: 252 EKLCEFNCNIRAPPKQMVWCSRPRSKERAVVVAWERRLMVVGDAPESI 299
           E    +   +   P+ +V C     +E A       R++V    P+S+
Sbjct: 351 ECGTVWGSGVAVAPRLVVTCRHVSPREAA-------RVLVRSTTPKSV 391


>gi|53729339 mitochondrial translational initiation factor 2
           precursor [Homo sapiens]
          Length = 727

 Score = 31.6 bits (70), Expect = 3.2
 Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 2/62 (3%)

Query: 329 EVPAASEEIFKIASMAPGALLLEAQKEYEKESQKADEYLREIQE-LGQLTQAVQQCIEAA 387
           ++P+A EEI ++ S  P A  +   ++YE+E +K  E L+ I+E   +  +A Q+  E  
Sbjct: 423 DLPSAGEEILEVES-EPRAREVVDWRKYEQEQEKGQEDLKIIEEKRKEHKEAHQKAREKY 481

Query: 388 GH 389
           GH
Sbjct: 482 GH 483


>gi|53729337 mitochondrial translational initiation factor 2
           precursor [Homo sapiens]
          Length = 727

 Score = 31.6 bits (70), Expect = 3.2
 Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 2/62 (3%)

Query: 329 EVPAASEEIFKIASMAPGALLLEAQKEYEKESQKADEYLREIQE-LGQLTQAVQQCIEAA 387
           ++P+A EEI ++ S  P A  +   ++YE+E +K  E L+ I+E   +  +A Q+  E  
Sbjct: 423 DLPSAGEEILEVES-EPRAREVVDWRKYEQEQEKGQEDLKIIEEKRKEHKEAHQKAREKY 481

Query: 388 GH 389
           GH
Sbjct: 482 GH 483


>gi|29837648 cytochrome P450, family 4, subfamily X, polypeptide 1
           [Homo sapiens]
          Length = 509

 Score = 31.6 bits (70), Expect = 3.2
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 684 EDELGGQFLDLSLHDTVTTLILGGHNKRAEQLA 716
           +DE G  F D+ +H  V+T +L GH+  A  ++
Sbjct: 294 KDESGSSFSDIDVHSEVSTFLLAGHDTLAASIS 326


>gi|58530842 desmoplakin isoform II [Homo sapiens]
          Length = 2272

 Score = 31.2 bits (69), Expect = 4.2
 Identities = 19/63 (30%), Positives = 32/63 (50%)

Query: 320 SRSTHEFLHEVPAASEEIFKIASMAPGALLLEAQKEYEKESQKADEYLREIQELGQLTQA 379
           ++ST  +L  +  +  + +      P   LLE  KE EKE +K  EY R++Q L   ++ 
Sbjct: 385 AQSTEAYLKGLQDSIRKKYPCDKNMPLQHLLEQIKELEKEREKILEYKRQVQNLVNKSKK 444

Query: 380 VQQ 382
           + Q
Sbjct: 445 IVQ 447


>gi|58530840 desmoplakin isoform I [Homo sapiens]
          Length = 2871

 Score = 31.2 bits (69), Expect = 4.2
 Identities = 19/63 (30%), Positives = 32/63 (50%)

Query: 320 SRSTHEFLHEVPAASEEIFKIASMAPGALLLEAQKEYEKESQKADEYLREIQELGQLTQA 379
           ++ST  +L  +  +  + +      P   LLE  KE EKE +K  EY R++Q L   ++ 
Sbjct: 385 AQSTEAYLKGLQDSIRKKYPCDKNMPLQHLLEQIKELEKEREKILEYKRQVQNLVNKSKK 444

Query: 380 VQQ 382
           + Q
Sbjct: 445 IVQ 447


>gi|20149635 p47 protein isoform a [Homo sapiens]
          Length = 370

 Score = 31.2 bits (69), Expect = 4.2
 Identities = 49/204 (24%), Positives = 82/204 (40%), Gaps = 29/204 (14%)

Query: 360 SQKADEYLREIQELGQLTQAVQQCIEAAGHEHQPDMQKSLLRAASFGKCFLDRFPPDSFV 419
           ++  D+  +  +E G +  AV++  ++ G   +P       R  + G   L   P +   
Sbjct: 116 NELVDDLFKGAKEHGAV--AVERVTKSPGETSKP-------RPFAGGGYRLGAAPEEESA 166

Query: 420 HMCQDLRVLNAVRDYHIGIPLTYSQYKQLTIQVLLDRLVLRRLY-PLAIQICEYLRLPEV 478
           ++  + R  ++ +D H+ + L  S +        LD   LR    P   Q  E +R  EV
Sbjct: 167 YVAGEKRQ-HSSQDVHVVLKLWKSGFS-------LDNGELRSYQDPSNAQFLESIRRGEV 218

Query: 479 QGVSRILAHWACYKVQQKDVSDEDVAR---------AINQKLGDTPG--VSYSDIAARAY 527
               R LAH     +  +D  DED  +            QKLG T    +S S  A +A 
Sbjct: 219 PAELRRLAHGGQVNLDMEDHRDEDFVKPKGAFKAFTGEGQKLGSTAPQVLSTSSPAQQAE 278

Query: 528 GCGRTELAIKLLEYEPRSGEQVPL 551
              +   +I + E EP +  Q+ L
Sbjct: 279 NEAKASSSILIDESEPTTNIQIRL 302


>gi|94400923 trypsin domain containing 1 isoform b [Homo sapiens]
          Length = 398

 Score = 30.8 bits (68), Expect = 5.5
 Identities = 39/152 (25%), Positives = 58/152 (38%), Gaps = 26/152 (17%)

Query: 142 SGVAILTGAHRFTLSANVGDLKLRRMPEVPGLQSAPSCW--------TVLCQDRVAHILL 193
           +G  +LT A     +   G    R    +  L  AP CW        T+LC    A +  
Sbjct: 247 AGPLLLTDARCLPGTEGGGVFTARPAGALVALVVAPLCWKAGEWVGFTLLCA--AAPLFR 304

Query: 194 AVGPDLYLLDH--AACSAVTPPGLAPGVSSFLQMAVSFTYRHLALFTDTGYIWMGTASLK 251
           A    L+ L H  AA +A+ PP +  GV   L +             D+G +W   A L 
Sbjct: 305 AARDALHRLPHSTAALAALLPPEV--GVPWGLPLR------------DSGPLWAAAAVLV 350

Query: 252 EKLCEFNCNIRAPPKQMVWCSRPRSKERAVVV 283
           E    +   +   P+ +V C     +E A V+
Sbjct: 351 ECGTVWGSGVAVAPRLVVTCRHVSPREAARVL 382


>gi|4504067 aspartate aminotransferase 1 [Homo sapiens]
          Length = 413

 Score = 30.4 bits (67), Expect = 7.1
 Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 9/128 (7%)

Query: 197 PDLYLLDHAACSAVTPPGLAPGVSSFLQMAVSFTYRHLALFTDTGYIWMGTASLKEKLCE 256
           P+  ++   AC A  P G+ P    + Q+A    +R L  F D+ Y    + +L+     
Sbjct: 182 PEFSIVVLHAC-AHNPTGIDPTPEQWKQIASVMKHRFLFPFFDSAYQGFASGNLERDAWA 240

Query: 257 FNCNIRAPPKQMVWCSRPRSKERAVVVAWERRLMVVGDAPESIQFVLDEDSYLV------ 310
               +    +   +C++  SK   +       L VVG  PESI  VL +   +V      
Sbjct: 241 IRYFVSEGFE--FFCAQSFSKNFGLYNERVGNLTVVGKEPESILQVLSQMEKIVRITWSN 298

Query: 311 PELDGVRI 318
           P   G RI
Sbjct: 299 PPAQGARI 306


>gi|67944634 exocyst complex component 1 isoform 1 [Homo sapiens]
          Length = 894

 Score = 30.4 bits (67), Expect = 7.1
 Identities = 35/178 (19%), Positives = 68/178 (38%), Gaps = 17/178 (9%)

Query: 625 NHQELGSFHIRASYAAEERIEGRVAALQTAADAFYKAKNEFAAKATEDQMRLLRLQRRLE 684
           NH +L   HI+A    +      + A   AADA  +  N  A +   D +  ++ Q++  
Sbjct: 278 NHMDLAKGHIKALQEGDLASSRGIEACTNAADALLQCMN-VALRPGHDLLLAVKQQQQRF 336

Query: 685 DELGGQFLDLSLHDTVTTLILGGHNKRA--EQLARDFRIPDKRLWWLKLTALADLEDWEE 742
            +L   F            +  GH++ +   Q + +  +P+   +   L   A L +W +
Sbjct: 337 SDLRELFARRLASHLNNVFVQQGHDQSSTLAQHSVELTLPNHHPFHRDLLRYAKLMEWLK 396

Query: 743 LEKFSKSKKSPIGYLPFVEICMKQHNK--------------YEAKKYASRVGPEQKVK 786
              + K +     Y+ ++    ++  K               E+KK+A+    E  VK
Sbjct: 397 STDYGKYEGLTKNYMDYLSRLYEREIKDFFEVAKIKMTGTTKESKKFATLPRKESAVK 454


>gi|30410720 exocyst complex component 1 isoform 1 [Homo sapiens]
          Length = 894

 Score = 30.4 bits (67), Expect = 7.1
 Identities = 35/178 (19%), Positives = 68/178 (38%), Gaps = 17/178 (9%)

Query: 625 NHQELGSFHIRASYAAEERIEGRVAALQTAADAFYKAKNEFAAKATEDQMRLLRLQRRLE 684
           NH +L   HI+A    +      + A   AADA  +  N  A +   D +  ++ Q++  
Sbjct: 278 NHMDLAKGHIKALQEGDLASSRGIEACTNAADALLQCMN-VALRPGHDLLLAVKQQQQRF 336

Query: 685 DELGGQFLDLSLHDTVTTLILGGHNKRA--EQLARDFRIPDKRLWWLKLTALADLEDWEE 742
            +L   F            +  GH++ +   Q + +  +P+   +   L   A L +W +
Sbjct: 337 SDLRELFARRLASHLNNVFVQQGHDQSSTLAQHSVELTLPNHHPFHRDLLRYAKLMEWLK 396

Query: 743 LEKFSKSKKSPIGYLPFVEICMKQHNK--------------YEAKKYASRVGPEQKVK 786
              + K +     Y+ ++    ++  K               E+KK+A+    E  VK
Sbjct: 397 STDYGKYEGLTKNYMDYLSRLYEREIKDFFEVAKIKMTGTTKESKKFATLPRKESAVK 454


>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
          Length = 2230

 Score = 30.0 bits (66), Expect = 9.3
 Identities = 51/272 (18%), Positives = 109/272 (40%), Gaps = 34/272 (12%)

Query: 444  QYKQLTIQVL------LDRLVLRRLYPLAIQICEYL-RLPEVQGVSRILAHWACYKVQQK 496
            Q K+LT Q+L      LD  ++R+     +++ E   +  ++Q + ++       ++ ++
Sbjct: 1843 QEKELTCQILEQKIKELDSCLVRQKEVHRVEMEELTSKYEKLQALQQMDGRNKPTELLEE 1902

Query: 497  DVSDEDVARAINQKLGDTPGVSYSDIAARAYGCGRTELAIKLLEYEPRSGEQVPLLLKMK 556
            +  ++  +  +  KL       ++D+  +  G  R +   KL +   R  + + +L K  
Sbjct: 1903 NTEEKSKSHLVQPKLLSNMEAQHNDLEFKLAGAEREKQ--KLGKEIVRLQKDLRMLRKEH 1960

Query: 557  RSKLALSKA---------IESGDTDLVFTVLLHLKNELNRGDFFMTLRNQPMALSLYRQF 607
            + +L + K          I+    DL       LK  +   +  +  + Q + +++    
Sbjct: 1961 QQELEILKKEYDQEREEKIKQEQEDLELKHNSTLKQLMREFNTQLAQKEQELEMTIKETI 2020

Query: 608  CKHQELET-------------LKDLYNQDDNHQELGSFHIRASYAAEERIEGRVAALQTA 654
             K QE+E              LK +  +DD+ +     +     A EE +  +V  LQT 
Sbjct: 2021 NKAQEVEAELLESHQEETNQLLKKIAEKDDDLKRTAKRYEEILDAREEEMTAKVRDLQTQ 2080

Query: 655  ADAF---YKAKNEFAAKATEDQMRLLRLQRRL 683
             +     Y+ K E       D + ++ LQ +L
Sbjct: 2081 LEELQKKYQQKLEQEENPGNDNVTIMELQTQL 2112


>gi|33286434 p47 protein isoform c [Homo sapiens]
          Length = 259

 Score = 30.0 bits (66), Expect = 9.3
 Identities = 46/185 (24%), Positives = 73/185 (39%), Gaps = 27/185 (14%)

Query: 379 AVQQCIEAAGHEHQPDMQKSLLRAASFGKCFLDRFPPDSFVHMCQDLRVLNAVRDYHIGI 438
           AV++  ++ G   +P       R  + G   L   P +   ++  + R  ++ +D H+ +
Sbjct: 22  AVERVTKSPGETSKP-------RPFAGGGYRLGAAPEEESAYVAGEKRQ-HSSQDVHVVL 73

Query: 439 PLTYSQYKQLTIQVLLDRLVLRRLY-PLAIQICEYLRLPEVQGVSRILAHWACYKVQQKD 497
            L  S +        LD   LR    P   Q  E +R  EV    R LAH     +  +D
Sbjct: 74  KLWKSGFS-------LDNGELRSYQDPSNAQFLESIRRGEVPAELRRLAHGGQVNLDMED 126

Query: 498 VSDEDVAR---------AINQKLGDTPG--VSYSDIAARAYGCGRTELAIKLLEYEPRSG 546
             DED  +            QKLG T    +S S  A +A    +   +I + E EP + 
Sbjct: 127 HRDEDFVKPKGAFKAFTGEGQKLGSTAPQVLSTSSPAQQAENEAKASSSILIDESEPTTN 186

Query: 547 EQVPL 551
            Q+ L
Sbjct: 187 IQIRL 191


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.135    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,445,788
Number of Sequences: 37866
Number of extensions: 1383578
Number of successful extensions: 3456
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 3443
Number of HSP's gapped (non-prelim): 26
length of query: 839
length of database: 18,247,518
effective HSP length: 111
effective length of query: 728
effective length of database: 14,044,392
effective search space: 10224317376
effective search space used: 10224317376
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.