Guide to the Human Genome
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Name: LOC401847 Sequence: fasta or formatted (167aa) NCBI GI: 169217819
Description:

PREDICTED: similar to hCG1793095

Not currently referenced in the text

Other entries for this name:
alt prot {148aa} PREDICTED: similar to hCG1793095
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         14           3
 C cysteine            2.4          4           1
 D aspartate           3.6          6           1
 E glutamate           4.2          7           2
 F phenylalanine       2.4          4           1
 G glycine             9.0         15           2
 H histidine           1.8          3           1
 I isoleucine          1.2          2           1
 K lysine              1.8          3           1
 L leucine            13.2         22           3
 M methionine          3.0          5           1
 N asparagine          3.0          5           1
 P proline             9.0         15           2
 Q glutamine           5.4          9           2
 R arginine            7.8         13           1
 S serine              6.0         10           2
 T threonine           7.8         13           1
 V valine              7.2         12           1
 W tryptophan          1.2          2           1
 Y tyrosine            1.8          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to hCG1793095 
LOC100134182          0.552   PREDICTED: similar to hCG1793095 
ENPP7                 0.432   ectonucleotide pyrophosphatase/phosphodiesterase 7 [...
LOC729213             0.177   PREDICTED: similar to ectonucleotide pyrophosphatas...
LOC645146             0.151   PREDICTED: similar to Kinase suppressor of Ras 1 [Ho...
ENPP5                 0.114   ectonucleotide pyrophosphatase/phosphodiesterase 5 (...
ENPP4                 0.088   ectonucleotide pyrophosphatase/phosphodiesterase 4 (p...
ENPP6                 0.085   ectonucleotide pyrophosphatase/phosphodiesterase 6 [...
KSR2                  0.063   kinase suppressor of ras 2 
ENPP3                 0.060   ectonucleotide pyrophosphatase/phosphodiesterase 3 ...
ENPP2                 0.041   autotaxin isoform 3 preproprotein 
ENPP2                 0.041   autotaxin isoform 2 preproprotein 
ENPP2                 0.041   autotaxin isoform 1 preproprotein 
ARSB                  0.035   arylsulfatase B isoform 2 precursor 
ARSB                  0.035   arylsulfatase B isoform 1 precursor 
ARSE                  0.035   arylsulfatase E precursor 
ENPP1                 0.025   ectonucleotide pyrophosphatase/phosphodiesterase 1 ...
LOC100292519          0.022   PREDICTED: hypothetical protein 
ARSF                  0.019   arylsulfatase F precursor 
ARSH                  0.016   arylsulfatase family, member H 
GUCY2D                0.016   guanylate cyclase 2D, membrane (retina-specific) [Hom...
ARSD                  0.016   arylsulfatase D isoform a precursor 
ARSD                  0.016   arylsulfatase D isoform b precursor 
LOC100292401          0.016   PREDICTED: hypothetical protein 
TRIM41                0.016   tripartite motif-containing 41 isoform 2 
TRIM41                0.016   tripartite motif-containing 41 isoform 1 
LOC100290692          0.013   PREDICTED: hypothetical protein XP_002348066 
LOC100287031          0.013   PREDICTED: hypothetical protein XP_002343746 
ARSI                  0.013   arylsulfatase family, member I 
GALNS                 0.013   galactosamine (N-acetyl)-6-sulfate sulfatase precurso...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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