Guide to the Human Genome
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Name: LOC100134182 Sequence: fasta or formatted (98aa) NCBI GI: 239756564
Description:

PREDICTED: similar to hCG1793095

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2          9           1
 C cysteine            2.0          2           1
 D aspartate           5.1          5           1
 E glutamate           2.0          2           1
 F phenylalanine       4.1          4           1
 G glycine             9.2          9           3
 H histidine           1.0          1           1
 I isoleucine          0.0          0           0
 K lysine              2.0          2           1
 L leucine            10.2         10           3
 M methionine          5.1          5           1
 N asparagine          3.1          3           1
 P proline             9.2          9           1
 Q glutamine           3.1          3           1
 R arginine            8.2          8           1
 S serine              5.1          5           1
 T threonine           9.2          9           1
 V valine              8.2          8           1
 W tryptophan          1.0          1           1
 Y tyrosine            3.1          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to hCG1793095 
LOC401847             0.978   PREDICTED: similar to hCG1793095 
ENPP7                 0.765   ectonucleotide pyrophosphatase/phosphodiesterase 7 [...
LOC729213             0.313   PREDICTED: similar to ectonucleotide pyrophosphatas...
ENPP5                 0.201   ectonucleotide pyrophosphatase/phosphodiesterase 5 (...
ENPP4                 0.156   ectonucleotide pyrophosphatase/phosphodiesterase 4 (p...
ENPP6                 0.151   ectonucleotide pyrophosphatase/phosphodiesterase 6 [...
ENPP3                 0.106   ectonucleotide pyrophosphatase/phosphodiesterase 3 ...
ENPP2                 0.073   autotaxin isoform 3 preproprotein 
ENPP2                 0.073   autotaxin isoform 2 preproprotein 
ENPP2                 0.073   autotaxin isoform 1 preproprotein 
ARSB                  0.061   arylsulfatase B isoform 2 precursor 
ARSB                  0.061   arylsulfatase B isoform 1 precursor 
ENPP1                 0.045   ectonucleotide pyrophosphatase/phosphodiesterase 1 ...
ARSE                  0.039   arylsulfatase E precursor 
GUCY2D                0.028   guanylate cyclase 2D, membrane (retina-specific) [Hom...
ARSH                  0.028   arylsulfatase family, member H 
ARSI                  0.022   arylsulfatase family, member I 
GALNS                 0.022   galactosamine (N-acetyl)-6-sulfate sulfatase precurso...
ARSF                  0.022   arylsulfatase F precursor 
PRSS7                 0.011   enterokinase precursor 
ARSJ                  0.011   arylsulfatase J 
STS                   0.011   steryl-sulfatase precursor 
CACHD1                0.011   cache domain containing 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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