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Search of human proteins with 169215618
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169215618 PREDICTED: similar to Glutathione S-transferase
theta-4 [Homo sapiens]
(176 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169215618 PREDICTED: similar to Glutathione S-transferase the... 355 1e-98
gi|167466164 glutathione S-transferase theta 1 [Homo sapiens] 151 3e-37
gi|4504187 glutathione S-transferase theta 2 [Homo sapiens] 117 7e-27
gi|124249394 glutathione S-transferase theta 2B [Homo sapiens] 117 7e-27
gi|198442844 dynein, axonemal, heavy chain 10 [Homo sapiens] 30 0.83
gi|50897850 KIAA1914 protein isoform 1 [Homo sapiens] 30 0.83
gi|24308338 KIAA1914 protein isoform 2 [Homo sapiens] 30 0.83
gi|55741870 zinc finger protein 483 isoform b [Homo sapiens] 30 1.4
gi|190014620 zinc finger protein 483 isoform a [Homo sapiens] 30 1.4
gi|42558270 HEAT repeat containing 4 [Homo sapiens] 28 3.1
gi|28372563 growth arrest-specific 2 like 3 [Homo sapiens] 28 3.1
gi|163644333 zinc finger protein 397 opposite strand [Homo sapiens] 28 4.1
gi|18641360 collectin sub-family member 12 [Homo sapiens] 28 5.4
gi|194328783 zinc finger protein 287 [Homo sapiens] 28 5.4
gi|208879470 eukaryotic translation elongation factor 1 epsilon ... 27 9.2
gi|4758862 eukaryotic translation elongation factor 1 epsilon 1 ... 27 9.2
gi|166295204 hypothetical protein LOC80127 [Homo sapiens] 27 9.2
>gi|169215618 PREDICTED: similar to Glutathione S-transferase
theta-4 [Homo sapiens]
Length = 176
Score = 355 bits (911), Expect = 1e-98
Identities = 176/176 (100%), Positives = 176/176 (100%)
Query: 1 MLAAILYYLCRKYSAPSHWCPPDPHARARVDEFVAWQHTAFQLPMKKIVWLKLLIPKITG 60
MLAAILYYLCRKYSAPSHWCPPDPHARARVDEFVAWQHTAFQLPMKKIVWLKLLIPKITG
Sbjct: 1 MLAAILYYLCRKYSAPSHWCPPDPHARARVDEFVAWQHTAFQLPMKKIVWLKLLIPKITG 60
Query: 61 EEVSAEKMEHAVEEVKNSLQLFEEKFLQDKMFITGNQISLADLVAVVEMMQPMAANYNVF 120
EEVSAEKMEHAVEEVKNSLQLFEEKFLQDKMFITGNQISLADLVAVVEMMQPMAANYNVF
Sbjct: 61 EEVSAEKMEHAVEEVKNSLQLFEEKFLQDKMFITGNQISLADLVAVVEMMQPMAANYNVF 120
Query: 121 LNSSKLAEWRMRVELNISSGLFREAHDRLMQLADWDFSTLDSMVKENISELLKKSR 176
LNSSKLAEWRMRVELNISSGLFREAHDRLMQLADWDFSTLDSMVKENISELLKKSR
Sbjct: 121 LNSSKLAEWRMRVELNISSGLFREAHDRLMQLADWDFSTLDSMVKENISELLKKSR 176
>gi|167466164 glutathione S-transferase theta 1 [Homo sapiens]
Length = 240
Score = 151 bits (381), Expect = 3e-37
Identities = 75/165 (45%), Positives = 103/165 (62%), Gaps = 2/165 (1%)
Query: 4 AILYYLCRKYSAPSHWCPPDPHARARVDEFVAWQHTAFQLPMKKIVWLKLLIPKITGEEV 63
AIL YL RKY P +W P D ARARVDE++AWQHT + + +W K++ P GE V
Sbjct: 69 AILLYLTRKYKVPDYWYPQDLQARARVDEYLAWQHTTLRRSCLRALWHKVMFPVFLGEPV 128
Query: 64 SAEKMEHAVEEVKNSLQLFEEKFLQDKMFITGNQISLADLVAVVEMMQPMAANYNVFLNS 123
S + + + E+ +LQL E+KFLQ+K F+TG ISLADLVA+ E+M P+ A VF
Sbjct: 129 SPQTLAATLAELDVTLQLLEDKFLQNKAFLTGPHISLADLVAITELMHPVGAGCQVFEGR 188
Query: 124 SKLAEWRMRVELNISSGLFREAHDRLMQLADWDFSTLDSMVKENI 168
KLA WR RVE + LF+EAH+ +++ DF D +K+ +
Sbjct: 189 PKLATWRQRVEAAVGEDLFQEAHEVILKAK--DFPPADPTIKQKL 231
>gi|4504187 glutathione S-transferase theta 2 [Homo sapiens]
Length = 244
Score = 117 bits (292), Expect = 7e-27
Identities = 61/152 (40%), Positives = 91/152 (59%), Gaps = 1/152 (0%)
Query: 3 AAILYYLCRKYSAPSHWCPPDPHARARVDEFVAWQHTAFQLPMKKIVWLKLLIPKITGEE 62
+AIL YL KY P HW P D ARARV E++ W + +W+++L P I G +
Sbjct: 68 SAILIYLSCKYQTPDHWYPSDLQARARVHEYLGWHADCIRGTFGIPLWVQVLGPLI-GVQ 126
Query: 63 VSAEKMEHAVEEVKNSLQLFEEKFLQDKMFITGNQISLADLVAVVEMMQPMAANYNVFLN 122
V EK+E + +LQ E+KFL D+ F+ G Q++LADL+A+ E+MQP+A Y +F
Sbjct: 127 VPEEKVERNRTAMDQALQWLEDKFLGDRPFLAGQQVTLADLMALEELMQPVALGYELFEG 186
Query: 123 SSKLAEWRMRVELNISSGLFREAHDRLMQLAD 154
+LA WR RVE + + L +EAH ++ + +
Sbjct: 187 RPRLAAWRGRVEAFLGAELCQEAHSIILSILE 218
>gi|124249394 glutathione S-transferase theta 2B [Homo sapiens]
Length = 244
Score = 117 bits (292), Expect = 7e-27
Identities = 61/152 (40%), Positives = 91/152 (59%), Gaps = 1/152 (0%)
Query: 3 AAILYYLCRKYSAPSHWCPPDPHARARVDEFVAWQHTAFQLPMKKIVWLKLLIPKITGEE 62
+AIL YL KY P HW P D ARARV E++ W + +W+++L P I G +
Sbjct: 68 SAILIYLSCKYQTPDHWYPSDLQARARVHEYLGWHADCIRGTFGIPLWVQVLGPLI-GVQ 126
Query: 63 VSAEKMEHAVEEVKNSLQLFEEKFLQDKMFITGNQISLADLVAVVEMMQPMAANYNVFLN 122
V EK+E + +LQ E+KFL D+ F+ G Q++LADL+A+ E+MQP+A Y +F
Sbjct: 127 VPEEKVERNRTAMDQALQWLEDKFLGDRPFLAGQQVTLADLMALEELMQPVALGYELFEG 186
Query: 123 SSKLAEWRMRVELNISSGLFREAHDRLMQLAD 154
+LA WR RVE + + L +EAH ++ + +
Sbjct: 187 RPRLAAWRGRVEAFLGAELCQEAHSIILSILE 218
>gi|198442844 dynein, axonemal, heavy chain 10 [Homo sapiens]
Length = 4471
Score = 30.4 bits (67), Expect = 0.83
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 66 EKMEHAVEEV---KNSLQLFEEKFLQDKMFITGNQISLADLVAVVEMMQPMAANYNVFLN 122
E+ EH ++E KN L+ E+ L++ TGN + DLV +E + A + L
Sbjct: 3573 EQREHLIQETSENKNLLKDLEDSLLRELATSTGNMLDNVDLVHTLEETKSKATEVSEKL- 3631
Query: 123 SSKLAE 128
KLAE
Sbjct: 3632 --KLAE 3635
>gi|50897850 KIAA1914 protein isoform 1 [Homo sapiens]
Length = 818
Score = 30.4 bits (67), Expect = 0.83
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 20/79 (25%)
Query: 50 WLKLLIPK---------ITGEEVSAEKMEHAVEEVKNSLQLFEEKFLQDKMFITG----- 95
WL LL+ + T + V A+++ V KNSL L + KF + +I G
Sbjct: 438 WLGLLLSESGSKTDPEEFTYDYVDADRVSCIVSAAKNSLLLMQRKFSEPNTYIDGLPSQD 497
Query: 96 ------NQISLADLVAVVE 108
+ + L++L A VE
Sbjct: 498 RQEELYDDVDLSELTAAVE 516
>gi|24308338 KIAA1914 protein isoform 2 [Homo sapiens]
Length = 814
Score = 30.4 bits (67), Expect = 0.83
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 20/79 (25%)
Query: 50 WLKLLIPK---------ITGEEVSAEKMEHAVEEVKNSLQLFEEKFLQDKMFITG----- 95
WL LL+ + T + V A+++ V KNSL L + KF + +I G
Sbjct: 438 WLGLLLSESGSKTDPEEFTYDYVDADRVSCIVSAAKNSLLLMQRKFSEPNTYIDGLPSQD 497
Query: 96 ------NQISLADLVAVVE 108
+ + L++L A VE
Sbjct: 498 RQEELYDDVDLSELTAAVE 516
>gi|55741870 zinc finger protein 483 isoform b [Homo sapiens]
Length = 256
Score = 29.6 bits (65), Expect = 1.4
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 9/69 (13%)
Query: 17 SHWCPPDPHARARVDEFVAWQHTAFQLPMKKIVWLKLLIPKITGEEVSAEKMEHAVEEVK 76
+ W PD H + ++ E + ++ LP + +W+K P E E V ++
Sbjct: 78 NQWLRPDIHTKEQILELLVFEQFLTILPGEIRIWVKSQHP---------ESSEEVVTLIE 128
Query: 77 NSLQLFEEK 85
+ Q+ EEK
Sbjct: 129 DLTQMLEEK 137
>gi|190014620 zinc finger protein 483 isoform a [Homo sapiens]
Length = 744
Score = 29.6 bits (65), Expect = 1.4
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 9/69 (13%)
Query: 17 SHWCPPDPHARARVDEFVAWQHTAFQLPMKKIVWLKLLIPKITGEEVSAEKMEHAVEEVK 76
+ W PD H + ++ E + ++ LP + +W+K P E E V ++
Sbjct: 78 NQWLRPDIHTKEQILELLVFEQFLTILPGEIRIWVKSQHP---------ESSEEVVTLIE 128
Query: 77 NSLQLFEEK 85
+ Q+ EEK
Sbjct: 129 DLTQMLEEK 137
>gi|42558270 HEAT repeat containing 4 [Homo sapiens]
Length = 979
Score = 28.5 bits (62), Expect = 3.1
Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 12/114 (10%)
Query: 47 KIVWLKLLIPKITGEEVSAEKMEHAVEEVKNSLQLFEEKFLQDKMFITGNQISLADLVAV 106
KI+ L++++ K+ EE ++ E+ +LQ ++ QD+M + + D AV
Sbjct: 841 KILKLEMVMGKVR-EEAKRVYLKPKGEQGPLTLQTLLQETFQDEMVLPRRPSEVCDTEAV 899
Query: 107 VEMMQPMAAN-----------YNVFLNSSKLAEWRMRVELNISSGLFREAHDRL 149
++ ++P A N + SS + + R E I+ G FR + L
Sbjct: 900 IKPVKPRAPNPWLQSSVPGLTTRSKVRSSLVKDLRTSPEKRIAVGPFRSDYPAL 953
>gi|28372563 growth arrest-specific 2 like 3 [Homo sapiens]
Length = 694
Score = 28.5 bits (62), Expect = 3.1
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 9/53 (16%)
Query: 31 DEFVAWQHTAFQLPMKK--IVWLKLLIPKITGEEVSAEKMEHAVEEVKNSLQL 81
DE++A +H A LPM++ +WL L+ G +V AEK+ +EE+ N + L
Sbjct: 36 DEWIAVRHEATLLPMQEDLSIWLSGLL----GIKVKAEKL---LEELDNGVLL 81
>gi|163644333 zinc finger protein 397 opposite strand [Homo sapiens]
Length = 494
Score = 28.1 bits (61), Expect = 4.1
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Query: 19 WCPPDPHARARVDEFVAWQHTAFQLPMKKIVWLKLLIPKITGEE--VSAEKMEHAVEEVK 76
W P+ H++ ++ E + + LP + WL+ P+ GEE E++E +EE +
Sbjct: 76 WLRPEVHSKEQILELLMLEQFLAILPEELQAWLREHRPE-NGEEAVTMLEELEKELEEPR 134
Query: 77 NSLQLFEEKFLQDKMFITGNQISLA 101
++ +M TG SL+
Sbjct: 135 QQDTTHGQEMFWQEMTSTGALKSLS 159
>gi|18641360 collectin sub-family member 12 [Homo sapiens]
Length = 742
Score = 27.7 bits (60), Expect = 5.4
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 7/83 (8%)
Query: 58 ITGEEVSAEKMEHAVEEVKNSLQLFEEKFLQDKMFITGNQISLADLVAVVEMMQPMAANY 117
IT + S + A++ +KN Q ++ FLQ K L V+ +Q +AAN
Sbjct: 220 ITNLQRSVDDTSQAIQRIKNDFQNLQQVFLQAKK-------DTDWLKEKVQSLQTLAANN 272
Query: 118 NVFLNSSKLAEWRMRVELNISSG 140
+ ++ M +LN +G
Sbjct: 273 SALAKANNDTLEDMNSQLNSFTG 295
>gi|194328783 zinc finger protein 287 [Homo sapiens]
Length = 761
Score = 27.7 bits (60), Expect = 5.4
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 9/71 (12%)
Query: 19 WCPPDPHARARVDEFVAWQHTAFQLPMKKIVWLKLLIPKITGEEVSAEKMEHAVEEVKNS 78
W P+ H++ ++ E + + LP + W+K P E E AV V++
Sbjct: 77 WLRPEIHSKEQILELLVLEQFLTILPGEVRTWVKSQYP---------ESSEEAVTLVEDL 127
Query: 79 LQLFEEKFLQD 89
Q+ EE+ Q+
Sbjct: 128 TQILEEEAPQN 138
>gi|208879470 eukaryotic translation elongation factor 1 epsilon 1
isoform 2 [Homo sapiens]
Length = 139
Score = 26.9 bits (58), Expect = 9.2
Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 9/55 (16%)
Query: 50 WLKLLIPKITGEEVSAEKMEHAVEEVKNSLQLFEEKFLQDKMFITGNQISLADLV 104
WL+ + ++ G S++ H + + NS +L+DK+++TG +LAD++
Sbjct: 74 WLEYRVTQVDGH--SSKNDIHTLLKDLNS-------YLEDKVYLTGYNFTLADIL 119
>gi|4758862 eukaryotic translation elongation factor 1 epsilon 1
isoform 1 [Homo sapiens]
Length = 174
Score = 26.9 bits (58), Expect = 9.2
Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 9/55 (16%)
Query: 50 WLKLLIPKITGEEVSAEKMEHAVEEVKNSLQLFEEKFLQDKMFITGNQISLADLV 104
WL+ + ++ G S++ H + + NS +L+DK+++TG +LAD++
Sbjct: 74 WLEYRVTQVDGH--SSKNDIHTLLKDLNS-------YLEDKVYLTGYNFTLADIL 119
>gi|166295204 hypothetical protein LOC80127 [Homo sapiens]
Length = 529
Score = 26.9 bits (58), Expect = 9.2
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 14/80 (17%)
Query: 36 WQHTAFQLPMKKIVW------LKLLIPKITG-------EEVSAEKMEHAVEEVKNSLQLF 82
W H + + + W L+LL K+ G + ++ V + + +
Sbjct: 429 WTHIEGNVDIGDLTWEQKEKVLRLLFAKMNGCPSRKYNQSSRPPVPDYVVSDSGETKEFG 488
Query: 83 EEKFLQDKMFITGNQISLAD 102
+E LQDK+FIT QI+++D
Sbjct: 489 DESKLQDKIFIT-QQIAISD 507
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.132 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,984,846
Number of Sequences: 37866
Number of extensions: 217413
Number of successful extensions: 761
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 750
Number of HSP's gapped (non-prelim): 18
length of query: 176
length of database: 18,247,518
effective HSP length: 95
effective length of query: 81
effective length of database: 14,650,248
effective search space: 1186670088
effective search space used: 1186670088
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.