Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 169212904

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169212904 PREDICTED: acyl-malonyl condensing enzyme 1-like 1
[Homo sapiens]
         (338 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169212904 PREDICTED: acyl-malonyl condensing enzyme 1-like 1 ...   682   0.0  
gi|89044650 PREDICTED: acyl-malonyl condensing enzyme 1-like 1 [...   650   0.0  
gi|16876447 acyl-malonyl condensing enzyme [Homo sapiens]             621   e-178
gi|22748975 acyl-malonyl condensing enzyme 1 [Homo sapiens]           603   e-173
gi|156616320 acyl-malonyl condensing enzyme 1-like 3 [Homo sapiens]   602   e-172
gi|147907044 transmembrane protein 22 [Homo sapiens]                  156   3e-38
gi|148235965 transmembrane protein 22 [Homo sapiens]                  156   3e-38
gi|148224156 transmembrane protein 22 [Homo sapiens]                  156   3e-38
gi|122939153 nicotinamide nucleotide transhydrogenase [Homo sapi...    35   0.12 
gi|122939155 nicotinamide nucleotide transhydrogenase [Homo sapi...    35   0.12 
gi|21361720 transmembrane protein 19 [Homo sapiens]                    33   0.28 
gi|197927233 transmembrane protein 20 isoform 1 [Homo sapiens]         33   0.36 
gi|23397492 transmembrane protein 20 isoform 2 [Homo sapiens]          33   0.36 
gi|27735000 Na+/K+ transporting ATPase interacting 3 [Homo sapiens]    33   0.47 
gi|94818790 rhomboid domain containing 2 isoform a [Homo sapiens]      32   0.62 
gi|46409370 olfactory receptor, family 10, subfamily W, member 1...    31   1.8  
gi|88758613 CD93 antigen precursor [Homo sapiens]                      30   3.1  
gi|167001141 glypican 1 precursor [Homo sapiens]                       30   3.1  
gi|239755199 PREDICTED: hypothetical protein [Homo sapiens]            30   4.0  
gi|226437571 abhydrolase domain containing 14A [Homo sapiens]          30   4.0  
gi|157419140 laminin, gamma 2 isoform b precursor [Homo sapiens]       29   5.2  
gi|157419138 laminin, gamma 2 isoform a precursor [Homo sapiens]       29   5.2  
gi|193788624 solute carrier family 38, member 5 [Homo sapiens]         29   5.2  
gi|154759242 olfactory receptor, family 2, subfamily A, member 2...    29   5.2  
gi|32698676 lipoma HMGIC fusion partner-like 2 [Homo sapiens]          29   5.2  
gi|54792073 mucolipin 2 [Homo sapiens]                                 29   6.8  
gi|106507204 hypothetical protein LOC653319 [Homo sapiens]             28   8.9  

>gi|169212904 PREDICTED: acyl-malonyl condensing enzyme 1-like 1
           [Homo sapiens]
          Length = 338

 Score =  682 bits (1759), Expect = 0.0
 Identities = 338/338 (100%), Positives = 338/338 (100%)

Query: 1   MAGSHPYFNLPDSTHPSPPSTPPSLHWHQRCQPSDATNGLLVALMGGGLPAGFVGPLSRM 60
           MAGSHPYFNLPDSTHPSPPSTPPSLHWHQRCQPSDATNGLLVALMGGGLPAGFVGPLSRM
Sbjct: 1   MAGSHPYFNLPDSTHPSPPSTPPSLHWHQRCQPSDATNGLLVALMGGGLPAGFVGPLSRM 60

Query: 61  AYQASNLPSLELLICRCLFHLPIALLLKLRGDPLLGPPDIRGRACFCALLNVLNIGCAYS 120
           AYQASNLPSLELLICRCLFHLPIALLLKLRGDPLLGPPDIRGRACFCALLNVLNIGCAYS
Sbjct: 61  AYQASNLPSLELLICRCLFHLPIALLLKLRGDPLLGPPDIRGRACFCALLNVLNIGCAYS 120

Query: 121 AVQVVPTGNAATVCKRSSTVCSAVLTLCLKSQVLSGYDWCGLLGSILGLIIIVGPELWTL 180
           AVQVVPTGNAATVCKRSSTVCSAVLTLCLKSQVLSGYDWCGLLGSILGLIIIVGPELWTL
Sbjct: 121 AVQVVPTGNAATVCKRSSTVCSAVLTLCLKSQVLSGYDWCGLLGSILGLIIIVGPELWTL 180

Query: 181 QEGTTGVYTILGYVQAFLGGLALSLGLLVYRSLHFPSCLPTVAFLSGLVGLLGSVPGLFV 240
           QEGTTGVYTILGYVQAFLGGLALSLGLLVYRSLHFPSCLPTVAFLSGLVGLLGSVPGLFV
Sbjct: 181 QEGTTGVYTILGYVQAFLGGLALSLGLLVYRSLHFPSCLPTVAFLSGLVGLLGSVPGLFV 240

Query: 241 LQTPVLPSDLLSWSCVGTVGILTLVSFTCVGYAVTKAHPALVCAVLHSEVVVALILQYNM 300
           LQTPVLPSDLLSWSCVGTVGILTLVSFTCVGYAVTKAHPALVCAVLHSEVVVALILQYNM
Sbjct: 241 LQTPVLPSDLLSWSCVGTVGILTLVSFTCVGYAVTKAHPALVCAVLHSEVVVALILQYNM 300

Query: 301 LHETVAPSDIMGAGVVLGSIAIITARNLIFERTEKVEE 338
           LHETVAPSDIMGAGVVLGSIAIITARNLIFERTEKVEE
Sbjct: 301 LHETVAPSDIMGAGVVLGSIAIITARNLIFERTEKVEE 338


>gi|89044650 PREDICTED: acyl-malonyl condensing enzyme 1-like 1
           [Homo sapiens]
          Length = 338

 Score =  650 bits (1676), Expect = 0.0
 Identities = 323/338 (95%), Positives = 329/338 (97%)

Query: 1   MAGSHPYFNLPDSTHPSPPSTPPSLHWHQRCQPSDATNGLLVALMGGGLPAGFVGPLSRM 60
           MAGSHPYFNLPDSTHPSPPSTPPSLHWHQRCQPSDATNGLLVAL+GGGLPAGFVGPLSRM
Sbjct: 1   MAGSHPYFNLPDSTHPSPPSTPPSLHWHQRCQPSDATNGLLVALLGGGLPAGFVGPLSRM 60

Query: 61  AYQASNLPSLELLICRCLFHLPIALLLKLRGDPLLGPPDIRGRACFCALLNVLNIGCAYS 120
           AYQASNLPSLEL+ICRCLFHLPIALLLKLRGDPLLGPPDIRGR CFCALLNVLNIGCAYS
Sbjct: 61  AYQASNLPSLELVICRCLFHLPIALLLKLRGDPLLGPPDIRGRTCFCALLNVLNIGCAYS 120

Query: 121 AVQVVPTGNAATVCKRSSTVCSAVLTLCLKSQVLSGYDWCGLLGSILGLIIIVGPELWTL 180
           AVQVVPTGNAATV K SSTVCSA+LTLCL+SQVLSGYDWCGLLGSILGLIIIVGP LWTL
Sbjct: 121 AVQVVPTGNAATVRKHSSTVCSAILTLCLESQVLSGYDWCGLLGSILGLIIIVGPGLWTL 180

Query: 181 QEGTTGVYTILGYVQAFLGGLALSLGLLVYRSLHFPSCLPTVAFLSGLVGLLGSVPGLFV 240
           QEGTTGVYT LGYVQAFLGGLALSLGLLVYRSLHFPSCLPTVAFLSGLVGLLGSVPGLFV
Sbjct: 181 QEGTTGVYTGLGYVQAFLGGLALSLGLLVYRSLHFPSCLPTVAFLSGLVGLLGSVPGLFV 240

Query: 241 LQTPVLPSDLLSWSCVGTVGILTLVSFTCVGYAVTKAHPALVCAVLHSEVVVALILQYNM 300
           LQ+PVLPSDLLSWSCVG VGILTLVSFTCVGYAVTKAHPALVCAVLHSEVV+ALILQY M
Sbjct: 241 LQSPVLPSDLLSWSCVGAVGILTLVSFTCVGYAVTKAHPALVCAVLHSEVVMALILQYFM 300

Query: 301 LHETVAPSDIMGAGVVLGSIAIITARNLIFERTEKVEE 338
           LHETVAPSDIMGAGVVLGSIAIITARNLI ERT KVEE
Sbjct: 301 LHETVAPSDIMGAGVVLGSIAIITARNLICERTGKVEE 338


>gi|16876447 acyl-malonyl condensing enzyme [Homo sapiens]
          Length = 338

 Score =  621 bits (1601), Expect = e-178
 Identities = 312/338 (92%), Positives = 317/338 (93%)

Query: 1   MAGSHPYFNLPDSTHPSPPSTPPSLHWHQRCQPSDATNGLLVALMGGGLPAGFVGPLSRM 60
           MAGSHPYFNLPDSTHPSPPS PPSL WHQRCQPS ATNGLLVAL+GGGLPAGFVGPLSRM
Sbjct: 1   MAGSHPYFNLPDSTHPSPPSAPPSLRWHQRCQPSGATNGLLVALLGGGLPAGFVGPLSRM 60

Query: 61  AYQASNLPSLELLICRCLFHLPIALLLKLRGDPLLGPPDIRGRACFCALLNVLNIGCAYS 120
           AYQ SNLPSLELLICRCLFHLPIALLLKLRGDPLLGPPDIRG ACFCALLNVL+IGCAYS
Sbjct: 61  AYQGSNLPSLELLICRCLFHLPIALLLKLRGDPLLGPPDIRGWACFCALLNVLSIGCAYS 120

Query: 121 AVQVVPTGNAATVCKRSSTVCSAVLTLCLKSQVLSGYDWCGLLGSILGLIIIVGPELWTL 180
           AVQVVP GNAATV K SSTVCSAVLTLCL+SQ L GY+WCGLLGSILGLIII+GP LWTL
Sbjct: 121 AVQVVPAGNAATVRKGSSTVCSAVLTLCLESQGLGGYEWCGLLGSILGLIIILGPGLWTL 180

Query: 181 QEGTTGVYTILGYVQAFLGGLALSLGLLVYRSLHFPSCLPTVAFLSGLVGLLGSVPGLFV 240
           QEGTTGVYT LGYVQAFLGGLALSLGLLVYRSLHFPSCLPTVAFLSGLVGLLG VPGLFV
Sbjct: 181 QEGTTGVYTTLGYVQAFLGGLALSLGLLVYRSLHFPSCLPTVAFLSGLVGLLGCVPGLFV 240

Query: 241 LQTPVLPSDLLSWSCVGTVGILTLVSFTCVGYAVTKAHPALVCAVLHSEVVVALILQYNM 300
           LQTPVLPSDLLSWSCVG  GIL LVSFTCVGYAVTKAHPALVCAVLHSEVVVALILQY M
Sbjct: 241 LQTPVLPSDLLSWSCVGAEGILALVSFTCVGYAVTKAHPALVCAVLHSEVVVALILQYYM 300

Query: 301 LHETVAPSDIMGAGVVLGSIAIITARNLIFERTEKVEE 338
           LHETVA SDIMGAGVVLGSIAIITARNL  ERT KVEE
Sbjct: 301 LHETVALSDIMGAGVVLGSIAIITARNLSCERTGKVEE 338


>gi|22748975 acyl-malonyl condensing enzyme 1 [Homo sapiens]
          Length = 338

 Score =  603 bits (1555), Expect = e-173
 Identities = 304/338 (89%), Positives = 314/338 (92%)

Query: 1   MAGSHPYFNLPDSTHPSPPSTPPSLHWHQRCQPSDATNGLLVALMGGGLPAGFVGPLSRM 60
           MAGSHPYFN PDSTHPSPPS PPSL W+QRCQPSDAT+GLLVAL+GGGLPAGFVGPLSRM
Sbjct: 1   MAGSHPYFNQPDSTHPSPPSAPPSLRWYQRCQPSDATSGLLVALLGGGLPAGFVGPLSRM 60

Query: 61  AYQASNLPSLELLICRCLFHLPIALLLKLRGDPLLGPPDIRGRACFCALLNVLNIGCAYS 120
           AYQASNLPSLELLI RCLFHLPIALLLKLRGDPLLG PDIR RA FCALLN+L+IGCAYS
Sbjct: 61  AYQASNLPSLELLIWRCLFHLPIALLLKLRGDPLLGTPDIRSRAFFCALLNILSIGCAYS 120

Query: 121 AVQVVPTGNAATVCKRSSTVCSAVLTLCLKSQVLSGYDWCGLLGSILGLIIIVGPELWTL 180
           AVQVVP GNAATV K SSTVCSAVLTLCL+SQ LSGYDWCGLLG ILGLIIIVGP LWTL
Sbjct: 121 AVQVVPAGNAATVRKGSSTVCSAVLTLCLESQGLSGYDWCGLLGCILGLIIIVGPGLWTL 180

Query: 181 QEGTTGVYTILGYVQAFLGGLALSLGLLVYRSLHFPSCLPTVAFLSGLVGLLGSVPGLFV 240
           QEGTTGVYT LGYV+AFLGGLALSL LLVYRSLHFP CLPTVAFLSGLVGLLGSVPGLFV
Sbjct: 181 QEGTTGVYTALGYVEAFLGGLALSLRLLVYRSLHFPPCLPTVAFLSGLVGLLGSVPGLFV 240

Query: 241 LQTPVLPSDLLSWSCVGTVGILTLVSFTCVGYAVTKAHPALVCAVLHSEVVVALILQYNM 300
           LQ PVLPSDLLSWSCVG VGIL LVSFTCVGYAVTKAHPALVCAVLHSEVVVALILQY M
Sbjct: 241 LQAPVLPSDLLSWSCVGAVGILALVSFTCVGYAVTKAHPALVCAVLHSEVVVALILQYYM 300

Query: 301 LHETVAPSDIMGAGVVLGSIAIITARNLIFERTEKVEE 338
           LHETVAPSDI+ AGVVLGSIAIITA+NL  ERT +VEE
Sbjct: 301 LHETVAPSDIVAAGVVLGSIAIITAQNLSCERTGRVEE 338


>gi|156616320 acyl-malonyl condensing enzyme 1-like 3 [Homo sapiens]
          Length = 338

 Score =  602 bits (1551), Expect = e-172
 Identities = 306/338 (90%), Positives = 311/338 (92%)

Query: 1   MAGSHPYFNLPDSTHPSPPSTPPSLHWHQRCQPSDATNGLLVALMGGGLPAGFVGPLSRM 60
           MAGSHPY N PDSTHPSPPS PPSL WHQ CQPSDATNGLLVAL+GGGLPAGFVGPLS M
Sbjct: 1   MAGSHPYLNPPDSTHPSPPSAPPSLRWHQCCQPSDATNGLLVALLGGGLPAGFVGPLSHM 60

Query: 61  AYQASNLPSLELLICRCLFHLPIALLLKLRGDPLLGPPDIRGRACFCALLNVLNIGCAYS 120
           AYQASNLPSLELLICRCLFHLPIALLLKLRGDPLLGPPDIRGRA F ALLNVL+IGCAYS
Sbjct: 61  AYQASNLPSLELLICRCLFHLPIALLLKLRGDPLLGPPDIRGRAYFYALLNVLSIGCAYS 120

Query: 121 AVQVVPTGNAATVCKRSSTVCSAVLTLCLKSQVLSGYDWCGLLGSILGLIIIVGPELWTL 180
           AVQVVP GNAATV K SSTVCSAVLTLCL+SQ LSGYDWCGLLGSILGLIIIVGP LWTL
Sbjct: 121 AVQVVPAGNAATVRKGSSTVCSAVLTLCLESQGLSGYDWCGLLGSILGLIIIVGPGLWTL 180

Query: 181 QEGTTGVYTILGYVQAFLGGLALSLGLLVYRSLHFPSCLPTVAFLSGLVGLLGSVPGLFV 240
           QEG TGVYT LGY QAF+GGLALSLGLLVYRSLHFPSCLPTVAFLSGLVGLLGSVPGLFV
Sbjct: 181 QEGITGVYTALGYGQAFVGGLALSLGLLVYRSLHFPSCLPTVAFLSGLVGLLGSVPGLFV 240

Query: 241 LQTPVLPSDLLSWSCVGTVGILTLVSFTCVGYAVTKAHPALVCAVLHSEVVVALILQYNM 300
           LQ PVLPSDL SWSCVG VGIL LVSFTCV YAVTKAHPALVCAVLHSEVVVALILQY M
Sbjct: 241 LQPPVLPSDLPSWSCVGAVGILALVSFTCVSYAVTKAHPALVCAVLHSEVVVALILQYYM 300

Query: 301 LHETVAPSDIMGAGVVLGSIAIITARNLIFERTEKVEE 338
           LHETVAPSDI+GAGVVLGSIAIITA NL  ER  KVEE
Sbjct: 301 LHETVAPSDIVGAGVVLGSIAIITAWNLSCEREGKVEE 338


>gi|147907044 transmembrane protein 22 [Homo sapiens]
          Length = 412

 Score =  156 bits (394), Expect = 3e-38
 Identities = 88/295 (29%), Positives = 153/295 (51%), Gaps = 1/295 (0%)

Query: 42  VALMGGGLPAGFVGPLSRMAYQASNLPSLELLICRCLFHLPIALLLKLRGDPLLGPPDIR 101
           + L G  L  G V  ++R+    S +PSLEL+  R +F +   L++    +   GP   R
Sbjct: 106 IVLFGSALAHGCVALITRLVSDRSKVPSLELIFIRSVFQVLSVLVVCYYQEAPFGPSGYR 165

Query: 102 GRACFCALLNVLNIGCAYSAVQVVPTGNAATVCKRSSTVCSAVLTLCLKSQVLSGYDWCG 161
            R  F  + NV++I CAY++  +VP  N  T+ + ++TV SA+L   L  + ++  D   
Sbjct: 166 LRLFFYGVCNVISITCAYTSFSIVPPSNGTTMWRATTTVFSAILAFLLVDEKMAYVDMAT 225

Query: 162 LLGSILGLIIIVGPELWTLQEGTTGVYT-ILGYVQAFLGGLALSLGLLVYRSLHFPSCLP 220
           ++ SILG+ +++ P +          +    GY    + GL  +L ++VYRS+     + 
Sbjct: 226 VVCSILGVCLVMIPNIVDEDNSLLNAWKEAFGYTMTVMAGLTTALSMIVYRSIKEKISMW 285

Query: 221 TVAFLSGLVGLLGSVPGLFVLQTPVLPSDLLSWSCVGTVGILTLVSFTCVGYAVTKAHPA 280
           T  F  G  G +  +  +F+LQ P++P D  +WS +  + + +  +F  V YA+ K HPA
Sbjct: 286 TALFTFGWTGTIWGISTMFILQEPIIPLDGETWSYLIAICVCSTAAFLGVYYALDKFHPA 345

Query: 281 LVCAVLHSEVVVALILQYNMLHETVAPSDIMGAGVVLGSIAIITARNLIFERTEK 335
           LV  V H E+VVA++LQ  +LH   +  D+ G  +++ S+ ++    L +    K
Sbjct: 346 LVSTVQHLEIVVAMVLQLLVLHIFPSIYDVFGGVIIMISVFVLAGYKLYWRNLRK 400


>gi|148235965 transmembrane protein 22 [Homo sapiens]
          Length = 412

 Score =  156 bits (394), Expect = 3e-38
 Identities = 88/295 (29%), Positives = 153/295 (51%), Gaps = 1/295 (0%)

Query: 42  VALMGGGLPAGFVGPLSRMAYQASNLPSLELLICRCLFHLPIALLLKLRGDPLLGPPDIR 101
           + L G  L  G V  ++R+    S +PSLEL+  R +F +   L++    +   GP   R
Sbjct: 106 IVLFGSALAHGCVALITRLVSDRSKVPSLELIFIRSVFQVLSVLVVCYYQEAPFGPSGYR 165

Query: 102 GRACFCALLNVLNIGCAYSAVQVVPTGNAATVCKRSSTVCSAVLTLCLKSQVLSGYDWCG 161
            R  F  + NV++I CAY++  +VP  N  T+ + ++TV SA+L   L  + ++  D   
Sbjct: 166 LRLFFYGVCNVISITCAYTSFSIVPPSNGTTMWRATTTVFSAILAFLLVDEKMAYVDMAT 225

Query: 162 LLGSILGLIIIVGPELWTLQEGTTGVYT-ILGYVQAFLGGLALSLGLLVYRSLHFPSCLP 220
           ++ SILG+ +++ P +          +    GY    + GL  +L ++VYRS+     + 
Sbjct: 226 VVCSILGVCLVMIPNIVDEDNSLLNAWKEAFGYTMTVMAGLTTALSMIVYRSIKEKISMW 285

Query: 221 TVAFLSGLVGLLGSVPGLFVLQTPVLPSDLLSWSCVGTVGILTLVSFTCVGYAVTKAHPA 280
           T  F  G  G +  +  +F+LQ P++P D  +WS +  + + +  +F  V YA+ K HPA
Sbjct: 286 TALFTFGWTGTIWGISTMFILQEPIIPLDGETWSYLIAICVCSTAAFLGVYYALDKFHPA 345

Query: 281 LVCAVLHSEVVVALILQYNMLHETVAPSDIMGAGVVLGSIAIITARNLIFERTEK 335
           LV  V H E+VVA++LQ  +LH   +  D+ G  +++ S+ ++    L +    K
Sbjct: 346 LVSTVQHLEIVVAMVLQLLVLHIFPSIYDVFGGVIIMISVFVLAGYKLYWRNLRK 400


>gi|148224156 transmembrane protein 22 [Homo sapiens]
          Length = 412

 Score =  156 bits (394), Expect = 3e-38
 Identities = 88/295 (29%), Positives = 153/295 (51%), Gaps = 1/295 (0%)

Query: 42  VALMGGGLPAGFVGPLSRMAYQASNLPSLELLICRCLFHLPIALLLKLRGDPLLGPPDIR 101
           + L G  L  G V  ++R+    S +PSLEL+  R +F +   L++    +   GP   R
Sbjct: 106 IVLFGSALAHGCVALITRLVSDRSKVPSLELIFIRSVFQVLSVLVVCYYQEAPFGPSGYR 165

Query: 102 GRACFCALLNVLNIGCAYSAVQVVPTGNAATVCKRSSTVCSAVLTLCLKSQVLSGYDWCG 161
            R  F  + NV++I CAY++  +VP  N  T+ + ++TV SA+L   L  + ++  D   
Sbjct: 166 LRLFFYGVCNVISITCAYTSFSIVPPSNGTTMWRATTTVFSAILAFLLVDEKMAYVDMAT 225

Query: 162 LLGSILGLIIIVGPELWTLQEGTTGVYT-ILGYVQAFLGGLALSLGLLVYRSLHFPSCLP 220
           ++ SILG+ +++ P +          +    GY    + GL  +L ++VYRS+     + 
Sbjct: 226 VVCSILGVCLVMIPNIVDEDNSLLNAWKEAFGYTMTVMAGLTTALSMIVYRSIKEKISMW 285

Query: 221 TVAFLSGLVGLLGSVPGLFVLQTPVLPSDLLSWSCVGTVGILTLVSFTCVGYAVTKAHPA 280
           T  F  G  G +  +  +F+LQ P++P D  +WS +  + + +  +F  V YA+ K HPA
Sbjct: 286 TALFTFGWTGTIWGISTMFILQEPIIPLDGETWSYLIAICVCSTAAFLGVYYALDKFHPA 345

Query: 281 LVCAVLHSEVVVALILQYNMLHETVAPSDIMGAGVVLGSIAIITARNLIFERTEK 335
           LV  V H E+VVA++LQ  +LH   +  D+ G  +++ S+ ++    L +    K
Sbjct: 346 LVSTVQHLEIVVAMVLQLLVLHIFPSIYDVFGGVIIMISVFVLAGYKLYWRNLRK 400


>gi|122939153 nicotinamide nucleotide transhydrogenase [Homo
           sapiens]
          Length = 1086

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 15/144 (10%)

Query: 190 ILGYVQAFLGGLALSLGLLVYRSLH-----FPSCLPTVAFLSGLVGLLGSVPGLFVLQTP 244
           I+ Y+  ++GG+  S  L+ Y  L       P  LP    L+   GLL +  G  ++   
Sbjct: 740 IVAYLGTYIGGVTFSGSLIAYGKLQGLLKSAPLLLPGRHLLNA--GLLAASVG-GIIPFM 796

Query: 245 VLPSDLLSWSCVGTVGILTLVSFTCVGYAVTKAHPALVCAVLHSEVVVAL-----ILQYN 299
           V PS     +C+G+V  L+ V    +  A+  A   +V  VL+S    AL     +L  N
Sbjct: 797 VDPSFTTGITCLGSVSALSAVMGVTLTAAIGGADMPVVITVLNSYSGWALCAEGFLLNNN 856

Query: 300 MLHETVAPSDIMGAGVVLGSIAII 323
           +L  T+  + I  +G +L  I  +
Sbjct: 857 LL--TIVGALIGSSGAILSYIMCV 878


>gi|122939155 nicotinamide nucleotide transhydrogenase [Homo
           sapiens]
          Length = 1086

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 15/144 (10%)

Query: 190 ILGYVQAFLGGLALSLGLLVYRSLH-----FPSCLPTVAFLSGLVGLLGSVPGLFVLQTP 244
           I+ Y+  ++GG+  S  L+ Y  L       P  LP    L+   GLL +  G  ++   
Sbjct: 740 IVAYLGTYIGGVTFSGSLIAYGKLQGLLKSAPLLLPGRHLLNA--GLLAASVG-GIIPFM 796

Query: 245 VLPSDLLSWSCVGTVGILTLVSFTCVGYAVTKAHPALVCAVLHSEVVVAL-----ILQYN 299
           V PS     +C+G+V  L+ V    +  A+  A   +V  VL+S    AL     +L  N
Sbjct: 797 VDPSFTTGITCLGSVSALSAVMGVTLTAAIGGADMPVVITVLNSYSGWALCAEGFLLNNN 856

Query: 300 MLHETVAPSDIMGAGVVLGSIAII 323
           +L  T+  + I  +G +L  I  +
Sbjct: 857 LL--TIVGALIGSSGAILSYIMCV 878


>gi|21361720 transmembrane protein 19 [Homo sapiens]
          Length = 336

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 19/110 (17%)

Query: 137 SSTVCSAVLTLCLKSQVLSGYDWCGLLGSILGLIIIVGPELWTLQE----GTTGVYTILG 192
           +S +C ++L     S   +G  W   +G +L       P L T  E    GT G  T++G
Sbjct: 169 ASWMCLSLLAALACS---AGDTWASEVGPVLSKS---SPRLITTWEKVPVGTNGGVTVVG 222

Query: 193 YVQAFLGGLALSLGLLVYRSLHFPSCL-------PTVAFLSGLVGLLGSV 235
            V + LGG  + +   +   L F + L       P +AF  GL GLLGS+
Sbjct: 223 LVSSLLGGTFVGIAYFL-TQLIFVNDLDISAPQWPIIAF-GGLAGLLGSI 270


>gi|197927233 transmembrane protein 20 isoform 1 [Homo sapiens]
          Length = 365

 Score = 33.1 bits (74), Expect = 0.36
 Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 8/117 (6%)

Query: 63  QASNLPSLELLICRCLFHLPIAL-LLKLRGDPLLGPPDIRGRACFCALLNVLN---IGCA 118
           +  ++ ++E+   RC+F + + +  L  R    +GP   +G+  F  L  VL    +   
Sbjct: 91  KVQDVHAVEISAFRCVFQMLVVIPCLIYRKTGFIGP---KGQRIFLILRGVLGSTAMMLI 147

Query: 119 YSAVQVVPTGNAATVCKRSSTVCSAVLTLCLKSQVLSGYDWCGLLGSILGLIIIVGP 175
           Y A Q +   +A  +   S    S    +CLK +  S +D    + +I G+I+IV P
Sbjct: 148 YYAYQTMSLADATVITFSSPVFTSIFAWICLKEKY-SPWDALFTVFTITGVILIVRP 203


>gi|23397492 transmembrane protein 20 isoform 2 [Homo sapiens]
          Length = 364

 Score = 33.1 bits (74), Expect = 0.36
 Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 8/117 (6%)

Query: 63  QASNLPSLELLICRCLFHLPIAL-LLKLRGDPLLGPPDIRGRACFCALLNVLN---IGCA 118
           +  ++ ++E+   RC+F + + +  L  R    +GP   +G+  F  L  VL    +   
Sbjct: 90  KVQDVHAVEISAFRCVFQMLVVIPCLIYRKTGFIGP---KGQRIFLILRGVLGSTAMMLI 146

Query: 119 YSAVQVVPTGNAATVCKRSSTVCSAVLTLCLKSQVLSGYDWCGLLGSILGLIIIVGP 175
           Y A Q +   +A  +   S    S    +CLK +  S +D    + +I G+I+IV P
Sbjct: 147 YYAYQTMSLADATVITFSSPVFTSIFAWICLKEKY-SPWDALFTVFTITGVILIVRP 202


>gi|27735000 Na+/K+ transporting ATPase interacting 3 [Homo sapiens]
          Length = 197

 Score = 32.7 bits (73), Expect = 0.47
 Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 32/121 (26%)

Query: 127 TGNAATVCKRSSTVCSAVLTLCLKSQVLS--GYDWCGLLGSILGLIIIV---------GP 175
           TG  + +C     +C+  L   L+ Q+    G+ W  +LG+ L +I+++          P
Sbjct: 5   TGRCSLIC-----LCALQLVSALERQIFDFLGFQWAPILGNFLHIIVVILGLFGTIQYRP 59

Query: 176 E------LWTLQEGTTGVYTILGYVQAFLGGLA-----LSLGLLVYRSL---HFPSCLPT 221
                  +WT    T  V+ I  Y++  +GGL+     ++  + V+RS    H P C+  
Sbjct: 60  RYIMVYTVWTALWVTWNVFIICFYLE--VGGLSKDTDLMTFNISVHRSWWREHGPGCVRR 117

Query: 222 V 222
           V
Sbjct: 118 V 118


>gi|94818790 rhomboid domain containing 2 isoform a [Homo sapiens]
          Length = 364

 Score = 32.3 bits (72), Expect = 0.62
 Identities = 15/32 (46%), Positives = 21/32 (65%)

Query: 219 LPTVAFLSGLVGLLGSVPGLFVLQTPVLPSDL 250
           +P+  F + L+ LL S P LF+LQ P+ PS L
Sbjct: 17  VPSATFFTALLSLLVSGPRLFLLQQPLAPSGL 48


>gi|46409370 olfactory receptor, family 10, subfamily W, member 1
           [Homo sapiens]
          Length = 305

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 19/137 (13%)

Query: 193 YVQAFLG-----GLALSLGLLVYRSLHFPSCLPTVAFLSGLVGLLGSVPGLFVLQTPV-- 245
           ++ +FLG     GL ++  +L+  S+H  +CL T  +       LGS+ G+ +  T V  
Sbjct: 15  HILSFLGVSLVYGLIITGNILIVVSIHTETCLCTSMYY-----FLGSLSGIEICYTAVVV 69

Query: 246 ---LPSDLLSWSCVGTVGILTLVSFTCVGYAVTKAHPALVCAVLHSE-VVVALILQYNML 301
              L + L S   +  +G  T ++F     A+  A   L+ A+ +   V +   LQY +L
Sbjct: 70  PHILANTLQSEKTITLLGCATQMAFF---IALGSADCFLLAAMAYDRYVAICHPLQYPLL 126

Query: 302 HETVAPSDIMGAGVVLG 318
                   ++ A V+ G
Sbjct: 127 MTLTLCVHLVVASVISG 143


>gi|88758613 CD93 antigen precursor [Homo sapiens]
          Length = 652

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 19/34 (55%), Positives = 23/34 (67%), Gaps = 4/34 (11%)

Query: 182 EGTTG----VYTILGYVQAFLGGLALSLGLLVYR 211
           +GT G    ++ ILG V A L  LAL+LGLLVYR
Sbjct: 574 DGTDGQKLLLFYILGTVVAILLLLALALGLLVYR 607


>gi|167001141 glypican 1 precursor [Homo sapiens]
          Length = 558

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 8/58 (13%)

Query: 141 CSAVLTLCLKSQVLSGYDWCGLLGSILGLIIIVGPELWTLQEGTTGVYTILGYVQAFL 198
           C  VL  CL +Q     +W  LL S    ++++  + W    GT+GV +++G V  +L
Sbjct: 272 CRNVLKGCLANQADLDAEWRNLLDS----MVLITDKFW----GTSGVESVIGSVHTWL 321


>gi|239755199 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 279

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 2/34 (5%)

Query: 2   AGSHPYFNLPDSTHPSPPSTPPSLH--WHQRCQP 33
           A +HP  + P +  P+ PST PS+H   H R  P
Sbjct: 153 ASTHPLIHHPSTHPPTHPSTHPSIHPTIHPRAHP 186


>gi|226437571 abhydrolase domain containing 14A [Homo sapiens]
          Length = 271

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 7/74 (9%)

Query: 162 LLGSILGLIIIVGPELWTLQEGTTGVYTILGYVQAFLGGLALSLGLLVYRSLHFP----S 217
           ++G++ G    +G     +  G T V T +   Q  L GL+L L LL+Y  L  P    S
Sbjct: 1   MVGALCGCWFRLGGARPLIPLGPTVVQTSMSRSQVALLGLSLLLMLLLYVGLPGPPEQTS 60

Query: 218 CL---PTVAFLSGL 228
           CL   P V  L+GL
Sbjct: 61  CLWGDPNVTVLAGL 74


>gi|157419140 laminin, gamma 2 isoform b precursor [Homo sapiens]
          Length = 1111

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 16/53 (30%), Positives = 21/53 (39%)

Query: 91  GDPLLGPPDIRGRACFCALLNVLNIGCAYSAVQVVPTGNAATVCKRSSTVCSA 143
           GDPL   P  + RAC C  +    +GC      V   G     C+  +  C A
Sbjct: 559 GDPLAPNPADKCRACNCNPMGSEPVGCRSDGTCVCKPGFGGPNCEHGAFSCPA 611


>gi|157419138 laminin, gamma 2 isoform a precursor [Homo sapiens]
          Length = 1193

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 16/53 (30%), Positives = 21/53 (39%)

Query: 91  GDPLLGPPDIRGRACFCALLNVLNIGCAYSAVQVVPTGNAATVCKRSSTVCSA 143
           GDPL   P  + RAC C  +    +GC      V   G     C+  +  C A
Sbjct: 559 GDPLAPNPADKCRACNCNPMGSEPVGCRSDGTCVCKPGFGGPNCEHGAFSCPA 611


>gi|193788624 solute carrier family 38, member 5 [Homo sapiens]
          Length = 472

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 17/76 (22%)

Query: 201 LALSLGLLVYRSLHFPSCLPTVAFLSGLVG------LLGSVPGLFVLQTPVLPSDL---L 251
           +A++L LLV  ++    C+PT+  + G++G      L+  +P +F L+  ++PS++   L
Sbjct: 377 VAIALILLVLVNV-LVICVPTIRDIFGVIGSTSAPSLIFILPSIFYLR--IVPSEVEPFL 433

Query: 252 SWS-----CVGTVGIL 262
           SW      C G +G+L
Sbjct: 434 SWPKIQALCFGVLGVL 449


>gi|154759242 olfactory receptor, family 2, subfamily A, member 2
           [Homo sapiens]
          Length = 318

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 24/102 (23%), Positives = 43/102 (42%), Gaps = 18/102 (17%)

Query: 85  LLLKLRGDPLLGPPDIRGRACFCALLNVLNIGCA---------YSAVQVVPTGNAATVCK 135
           LLL+L   P  GP D+     FC +L+VL + CA         ++    V  G  + +  
Sbjct: 161 LLLRL---PFCGPRDVNH--LFCEILSVLKLACADTWVNQVVIFATCVFVLVGPLSLILV 215

Query: 136 RSSTVCSAVLTLCLKSQVLSGYDWCG----LLGSILGLIIIV 173
               +  A+L +  K   +  +  C     ++G   G+ ++V
Sbjct: 216 SYMHILGAILKIQTKEGRIKAFSTCSSHLCVVGLFFGIAMVV 257


>gi|32698676 lipoma HMGIC fusion partner-like 2 [Homo sapiens]
          Length = 228

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 3/73 (4%)

Query: 143 AVLTLCLKSQVLSG-YDWCGLLGSILGLIIIVGPELWTLQEGTTGVYTILG-YVQAFLGG 200
           +V T+C++S +    ++ CGLL  I GL +I+G  L+    G        G Y  A+  G
Sbjct: 118 SVFTMCVQSIMKKSIFNVCGLLQGIAGLFLILGLILYPAGWGCQKAIDYCGHYASAYKPG 177

Query: 201 LALSLGLLVYRSL 213
              SLG   Y ++
Sbjct: 178 -DCSLGWAFYTAI 189


>gi|54792073 mucolipin 2 [Homo sapiens]
          Length = 566

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 13/80 (16%)

Query: 139 TVCSAVLTLCLKSQVLSGYDWCGLLGSILGLIIIVGPELWTLQEGTTGVYTILGYVQAFL 198
           T+  ++L + +K++ L+ YD C +      L++ V            GV   LGY QA+ 
Sbjct: 357 TIIGSILKMEIKAKNLTNYDLCSIFLGTSTLLVWV------------GVIRYLGYFQAY- 403

Query: 199 GGLALSLGLLVYRSLHFPSC 218
             L L++   + + L F +C
Sbjct: 404 NVLILTMQASLPKVLRFCAC 423


>gi|106507204 hypothetical protein LOC653319 [Homo sapiens]
          Length = 471

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 2/24 (8%)

Query: 12 DSTHPSPPSTPPSLHWHQRCQPSD 35
          D   PSPP++PPSL    R +PSD
Sbjct: 11 DQAPPSPPTSPPSL--RHRLKPSD 32


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.141    0.442 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,082,507
Number of Sequences: 37866
Number of extensions: 669660
Number of successful extensions: 2622
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 2597
Number of HSP's gapped (non-prelim): 28
length of query: 338
length of database: 18,247,518
effective HSP length: 103
effective length of query: 235
effective length of database: 14,347,320
effective search space: 3371620200
effective search space used: 3371620200
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press