Guide to the Human Genome
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Name: LOC651868 Sequence: fasta or formatted (111aa) NCBI GI: 169205922
Description:

PREDICTED: similar to hCG1643984

Not currently referenced in the text

Other entries for this name:
alt mRNA {111aa} PREDICTED: similar to hCG1643984
alt mRNA {111aa} PREDICTED: similar to hCG1643984
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5          5           1
 C cysteine            5.4          6           1
 D aspartate           1.8          2           1
 E glutamate           5.4          6           1
 F phenylalanine       1.8          2           1
 G glycine             6.3          7           1
 H histidine           3.6          4           2
 I isoleucine          5.4          6           2
 K lysine             13.5         15           2
 L leucine            13.5         15           3
 M methionine          1.8          2           1
 N asparagine          6.3          7           2
 P proline             2.7          3           1
 Q glutamine           5.4          6           1
 R arginine            0.0          0           0
 S serine              6.3          7           2
 T threonine           7.2          8           1
 V valine              6.3          7           1
 W tryptophan          0.9          1           1
 Y tyrosine            1.8          2           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to hCG1643984 
LOC651868             1.000   PREDICTED: similar to hCG1643984 
LOC651868             1.000   PREDICTED: similar to hCG1643984 
HIST1H2AG             0.461   histone cluster 1, H2ag 
HIST1H2AI             0.461   histone cluster 1, H2ai 
HIST1H2AK             0.461   histone cluster 1, H2ak 
HIST1H2AM             0.461   histone cluster 1, H2am 
HIST1H2AL             0.461   histone cluster 1, H2al 
HIST1H2AD             0.461   histone cluster 1, H2ad 
HIST1H2AH             0.451   histone cluster 1, H2ah 
HIST1H2AB             0.451   histone cluster 1, H2ab 
HIST1H2AE             0.451   histone cluster 1, H2ae 
HIST1H2AJ             0.451   histone cluster 1, H2aj 
HIST2H2AA4            0.451   histone cluster 2, H2aa4 
HIST2H2AA3            0.451   histone cluster 2, H2aa3 
HIST1H2AC             0.446   histone cluster 1, H2ac 
HIST3H2A              0.446   histone cluster 3, H2a 
HIST2H2AC             0.436   histone cluster 2, H2ac 
HIST2H2AB             0.426   histone cluster 2, H2ab 
H2AFJ                 0.417   H2A histone family, member J 
HIST1H2AA             0.412   histone cluster 1, H2aa 
H2AFX                 0.368   H2A histone family, member X 
H2AFY                 0.147   H2A histone family, member Y isoform 2 
H2AFY                 0.147   H2A histone family, member Y isoform 2 
H2AFY                 0.147   H2A histone family, member Y isoform 3 
H2AFY                 0.147   H2A histone family, member Y isoform 1 
H2AFY2                0.137   H2A histone family, member Y2 
H2AFZ                 0.093   H2A histone family, member Z 
H2AFV                 0.083   H2A histone family, member V isoform 1 
H2AFV                 0.069   H2A histone family, member V isoform 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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