Guide to the Human Genome
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Name: HIST1H2AB Sequence: fasta or formatted (130aa) NCBI GI: 19557656
Description:

histone cluster 1, H2ab

Referenced in:

Histones, Related Proteins, and Modifying Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.3         16           2
 C cysteine            0.0          0           0
 D aspartate           1.5          2           1
 E glutamate           5.4          7           2
 F phenylalanine       0.8          1           1
 G glycine            10.8         14           2
 H histidine           3.1          4           2
 I isoleucine          4.6          6           2
 K lysine             10.0         13           2
 L leucine            12.3         16           2
 M methionine          0.8          1           1
 N asparagine          4.6          6           1
 P proline             3.8          5           1
 Q glutamine           3.8          5           1
 R arginine           10.0         13           1
 S serine              3.8          5           2
 T threonine           3.8          5           1
 V valine              6.2          8           1
 W tryptophan          0.0          0           0
 Y tyrosine            2.3          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   histone cluster 1, H2ab 
HIST1H2AE             1.000   histone cluster 1, H2ae 
HIST1H2AD             0.996   histone cluster 1, H2ad 
HIST3H2A              0.996   histone cluster 3, H2a 
HIST1H2AG             0.991   histone cluster 1, H2ag 
HIST1H2AI             0.991   histone cluster 1, H2ai 
HIST1H2AK             0.991   histone cluster 1, H2ak 
HIST1H2AM             0.991   histone cluster 1, H2am 
HIST1H2AL             0.991   histone cluster 1, H2al 
HIST1H2AC             0.991   histone cluster 1, H2ac 
HIST2H2AA4            0.983   histone cluster 2, H2aa4 
HIST2H2AA3            0.983   histone cluster 2, H2aa3 
HIST1H2AH             0.974   histone cluster 1, H2ah 
HIST1H2AJ             0.965   histone cluster 1, H2aj 
HIST2H2AC             0.939   histone cluster 2, H2ac 
HIST2H2AB             0.934   histone cluster 2, H2ab 
HIST1H2AA             0.930   histone cluster 1, H2aa 
H2AFJ                 0.913   H2A histone family, member J 
H2AFX                 0.878   H2A histone family, member X 
H2AFY                 0.546   H2A histone family, member Y isoform 2 
H2AFY                 0.546   H2A histone family, member Y isoform 2 
H2AFY                 0.546   H2A histone family, member Y isoform 3 
H2AFY                 0.546   H2A histone family, member Y isoform 1 
H2AFY2                0.533   H2A histone family, member Y2 
H2AFV                 0.493   H2A histone family, member V isoform 1 
H2AFZ                 0.489   H2A histone family, member Z 
H2AFV                 0.437   H2A histone family, member V isoform 2 
LOC651868             0.402   PREDICTED: similar to hCG1643984 
LOC651868             0.402   PREDICTED: similar to hCG1643984 
LOC651868             0.402   PREDICTED: similar to hCG1643984 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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