Guide to the Human Genome
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Name: HIST3H2A Sequence: fasta or formatted (130aa) NCBI GI: 15617199
Description:

histone cluster 3, H2a

Referenced in:

Histones, Related Proteins, and Modifying Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.3         16           2
 C cysteine            0.0          0           0
 D aspartate           1.5          2           1
 E glutamate           5.4          7           2
 F phenylalanine       0.8          1           1
 G glycine            10.8         14           2
 H histidine           3.1          4           2
 I isoleucine          4.6          6           2
 K lysine             10.0         13           2
 L leucine            12.3         16           2
 M methionine          0.8          1           1
 N asparagine          4.6          6           1
 P proline             3.8          5           1
 Q glutamine           3.8          5           1
 R arginine           10.0         13           1
 S serine              4.6          6           2
 T threonine           3.1          4           1
 V valine              6.2          8           1
 W tryptophan          0.0          0           0
 Y tyrosine            2.3          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   histone cluster 3, H2a 
HIST1H2AC             0.996   histone cluster 1, H2ac 
HIST1H2AB             0.996   histone cluster 1, H2ab 
HIST1H2AE             0.996   histone cluster 1, H2ae 
HIST1H2AD             0.991   histone cluster 1, H2ad 
HIST2H2AA4            0.987   histone cluster 2, H2aa4 
HIST2H2AA3            0.987   histone cluster 2, H2aa3 
HIST1H2AG             0.987   histone cluster 1, H2ag 
HIST1H2AI             0.987   histone cluster 1, H2ai 
HIST1H2AK             0.987   histone cluster 1, H2ak 
HIST1H2AM             0.987   histone cluster 1, H2am 
HIST1H2AL             0.987   histone cluster 1, H2al 
HIST1H2AH             0.965   histone cluster 1, H2ah 
HIST1H2AJ             0.961   histone cluster 1, H2aj 
HIST2H2AC             0.943   histone cluster 2, H2ac 
HIST2H2AB             0.939   histone cluster 2, H2ab 
HIST1H2AA             0.934   histone cluster 1, H2aa 
H2AFJ                 0.921   H2A histone family, member J 
H2AFX                 0.882   H2A histone family, member X 
H2AFY                 0.555   H2A histone family, member Y isoform 2 
H2AFY                 0.555   H2A histone family, member Y isoform 2 
H2AFY                 0.555   H2A histone family, member Y isoform 3 
H2AFY                 0.555   H2A histone family, member Y isoform 1 
H2AFY2                0.537   H2A histone family, member Y2 
H2AFV                 0.498   H2A histone family, member V isoform 1 
H2AFZ                 0.493   H2A histone family, member Z 
H2AFV                 0.441   H2A histone family, member V isoform 2 
LOC651868             0.397   PREDICTED: similar to hCG1643984 
LOC651868             0.397   PREDICTED: similar to hCG1643984 
LOC651868             0.397   PREDICTED: similar to hCG1643984 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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