H2AFX 28784

Name: H2AFX	Sequence: fasta or formatted (143aa)		NCBI GI: 4504253
Description: H2A histone family, member X		Referenced in: DNases, Recombination, and DNA Repair Histones, Related Proteins, and Modifying Enzymes
Composition: Amino acid Percentage Count Longest homopolymer A alanine 14.0 20 2 C cysteine 0.0 0 0 D aspartate 1.4 2 1 E glutamate 4.9 7 2 F phenylalanine 0.7 1 1 G glycine 11.9 17 2 H histidine 2.1 3 1 I isoleucine 4.2 6 2 K lysine 9.1 13 2 L leucine 11.2 16 2 M methionine 0.7 1 1 N asparagine 3.5 5 1 P proline 4.9 7 1 Q glutamine 4.2 6 1 R arginine 8.4 12 1 S serine 4.9 7 2 T threonine 4.9 7 1 V valine 6.3 9 1 W tryptophan 0.0 0 0 Y tyrosine 2.8 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 H2A histone family, member X HIST2H2AB 0.811 histone cluster 2, H2ab HIST1H2AA 0.799 histone cluster 1, H2aa HIST1H2AC 0.799 histone cluster 1, H2ac HIST2H2AA4 0.799 histone cluster 2, H2aa4 HIST2H2AC 0.799 histone cluster 2, H2ac HIST2H2AA3 0.799 histone cluster 2, H2aa3 HIST1H2AG 0.795 histone cluster 1, H2ag HIST1H2AI 0.795 histone cluster 1, H2ai HIST1H2AH 0.795 histone cluster 1, H2ah HIST1H2AK 0.795 histone cluster 1, H2ak HIST3H2A 0.795 histone cluster 3, H2a HIST1H2AM 0.795 histone cluster 1, H2am HIST1H2AL 0.795 histone cluster 1, H2al HIST1H2AJ 0.795 histone cluster 1, H2aj H2AFJ 0.795 H2A histone family, member J HIST1H2AB 0.791 histone cluster 1, H2ab HIST1H2AE 0.791 histone cluster 1, H2ae HIST1H2AD 0.791 histone cluster 1, H2ad H2AFY 0.528 H2A histone family, member Y isoform 2 H2AFY 0.528 H2A histone family, member Y isoform 2 H2AFY 0.528 H2A histone family, member Y isoform 3 H2AFY 0.528 H2A histone family, member Y isoform 1 H2AFY2 0.504 H2A histone family, member Y2 H2AFV 0.433 H2A histone family, member V isoform 1 H2AFZ 0.429 H2A histone family, member Z H2AFV 0.382 H2A histone family, member V isoform 2 H2AFV 0.323 H2A histone family, member V isoform 3 LOC651868 0.295 PREDICTED: similar to hCG1643984 LOC651868 0.295 PREDICTED: similar to hCG1643984 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.