H2AFJ 25018

Name: H2AFJ	Sequence: fasta or formatted (129aa)		NCBI GI: 29553970
Description: H2A histone family, member J		Referenced in: Histones, Related Proteins, and Modifying Enzymes
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.6 15 2 C cysteine 0.0 0 0 D aspartate 1.6 2 1 E glutamate 5.4 7 2 F phenylalanine 0.8 1 1 G glycine 10.1 13 2 H histidine 1.6 2 1 I isoleucine 4.7 6 2 K lysine 10.9 14 2 L leucine 12.4 16 2 M methionine 0.8 1 1 N asparagine 4.7 6 1 P proline 3.9 5 1 Q glutamine 4.7 6 1 R arginine 9.3 12 1 S serine 4.7 6 2 T threonine 3.9 5 1 V valine 7.0 9 1 W tryptophan 0.0 0 0 Y tyrosine 2.3 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 H2A histone family, member J HIST2H2AC 0.973 histone cluster 2, H2ac HIST2H2AA4 0.946 histone cluster 2, H2aa4 HIST2H2AA3 0.946 histone cluster 2, H2aa3 HIST1H2AG 0.946 histone cluster 1, H2ag HIST1H2AI 0.946 histone cluster 1, H2ai HIST1H2AK 0.946 histone cluster 1, H2ak HIST1H2AC 0.946 histone cluster 1, H2ac HIST1H2AM 0.946 histone cluster 1, H2am HIST1H2AL 0.946 histone cluster 1, H2al HIST1H2AJ 0.946 histone cluster 1, H2aj HIST1H2AH 0.942 histone cluster 1, H2ah HIST2H2AB 0.942 histone cluster 2, H2ab HIST3H2A 0.942 histone cluster 3, H2a HIST1H2AD 0.942 histone cluster 1, H2ad HIST1H2AB 0.933 histone cluster 1, H2ab HIST1H2AE 0.933 histone cluster 1, H2ae HIST1H2AA 0.929 histone cluster 1, H2aa H2AFX 0.902 H2A histone family, member X H2AFY 0.558 H2A histone family, member Y isoform 2 H2AFY 0.558 H2A histone family, member Y isoform 2 H2AFY 0.558 H2A histone family, member Y isoform 3 H2AFY 0.558 H2A histone family, member Y isoform 1 H2AFY2 0.545 H2A histone family, member Y2 H2AFV 0.509 H2A histone family, member V isoform 1 H2AFZ 0.504 H2A histone family, member Z H2AFV 0.442 H2A histone family, member V isoform 2 H2AFV 0.384 H2A histone family, member V isoform 3 LOC651868 0.379 PREDICTED: similar to hCG1643984 LOC651868 0.379 PREDICTED: similar to hCG1643984 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.