Search of human proteins with 169205589

Search of human proteins with 169205589

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169205589 PREDICTED: chromosome 12 open reading frame 55
[Homo sapiens]
         (1241 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169205589 PREDICTED: chromosome 12 open reading frame 55 [Hom...  2472   0.0  
gi|169203876 PREDICTED: hypothetical protein [Homo sapiens]          2469   0.0  
gi|169204921 PREDICTED: chromosome 12 open reading frame 55 [Hom...  1816   0.0  
gi|19923597 Sin3A-associated protein, 130kDa isoform b [Homo sap...    35   0.58 
gi|225579127 Sin3A-associated protein, 130kDa isoform a [Homo sa...    35   0.58 
gi|163792201 Shaw-related voltage-gated potassium channel protei...    34   0.99 
gi|21450645 tetratricopeptide repeat domain 16 [Homo sapiens]          34   0.99 
gi|58761508 midnolin [Homo sapiens]                                    32   2.9  
gi|24308527 stereocilin [Homo sapiens]                                 32   3.8  
gi|34452709 bromodomain containing 8 isoform 3 [Homo sapiens]          32   3.8  
gi|34452707 bromodomain containing 8 isoform 2 [Homo sapiens]          32   3.8  
gi|34452705 bromodomain containing 8 isoform 1 [Homo sapiens]          32   3.8  
gi|40353729 Ras and Rab interactor 3 [Homo sapiens]                    32   3.8  
gi|19743886 regulatory factor X4 isoform a [Homo sapiens]              31   6.4  
gi|239750235 PREDICTED: hypothetical protein [Homo sapiens]            31   6.4  
gi|239744535 PREDICTED: hypothetical protein XP_002343184 [Homo ...    31   6.4  
gi|47132527 regulatory factor X4 isoform c [Homo sapiens]              31   6.4  
gi|188219559 protein phosphatase 1, regulatory subunit 15B [Homo...    31   6.4  
gi|239753555 PREDICTED: hypothetical protein XP_002345695 [Homo ...    31   8.4  
gi|156105697 ring finger and CCCH-type zinc finger domains 2 iso...    31   8.4  
gi|156105699 ring finger and CCCH-type zinc finger domains 2 iso...    31   8.4  

>gi|169205589 PREDICTED: chromosome 12 open reading frame 55 [Homo
            sapiens]
          Length = 1241

 Score = 2472 bits (6408), Expect = 0.0
 Identities = 1241/1241 (100%), Positives = 1241/1241 (100%)

Query: 1    MAAQGSPSSSPSDDSTTSGSLPELPPTSTATSRSPPESKGSSRSSLLQWTCPEDSLPLAV 60
            MAAQGSPSSSPSDDSTTSGSLPELPPTSTATSRSPPESKGSSRSSLLQWTCPEDSLPLAV
Sbjct: 1    MAAQGSPSSSPSDDSTTSGSLPELPPTSTATSRSPPESKGSSRSSLLQWTCPEDSLPLAV 60

Query: 61   FYGPLDAKNPLLASCEKEIQELLGFMRKKKALATTEEEKHEFRRRCATSLFNIWTKYAPR 120
            FYGPLDAKNPLLASCEKEIQELLGFMRKKKALATTEEEKHEFRRRCATSLFNIWTKYAPR
Sbjct: 61   FYGPLDAKNPLLASCEKEIQELLGFMRKKKALATTEEEKHEFRRRCATSLFNIWTKYAPR 120

Query: 121  LPADYYNEKLLKVGDSLCQMKEYKLALLQCYGRYLQQFNTNFDENKVDVTQFKATFFPKG 180
            LPADYYNEKLLKVGDSLCQMKEYKLALLQCYGRYLQQFNTNFDENKVDVTQFKATFFPKG
Sbjct: 121  LPADYYNEKLLKVGDSLCQMKEYKLALLQCYGRYLQQFNTNFDENKVDVTQFKATFFPKG 180

Query: 181  FKDKTAGLTFHALSGKNMCNYQLVCDSDENLKNKESVVQCLHILSSLRLIMQVALPQEHL 240
            FKDKTAGLTFHALSGKNMCNYQLVCDSDENLKNKESVVQCLHILSSLRLIMQVALPQEHL
Sbjct: 181  FKDKTAGLTFHALSGKNMCNYQLVCDSDENLKNKESVVQCLHILSSLRLIMQVALPQEHL 240

Query: 241  CWIIFNGTIYIYTICRKLMVIGQSSKALEYLLWASMCMESLVPLLSLRYLTWRATLYTAV 300
            CWIIFNGTIYIYTICRKLMVIGQSSKALEYLLWASMCMESLVPLLSLRYLTWRATLYTAV
Sbjct: 241  CWIIFNGTIYIYTICRKLMVIGQSSKALEYLLWASMCMESLVPLLSLRYLTWRATLYTAV 300

Query: 301  CQCCYDCHAGIHGEAFARRALAKIDELRQLELMSSSKSQEESRRYFREATMKMAVMIFKR 360
            CQCCYDCHAGIHGEAFARRALAKIDELRQLELMSSSKSQEESRRYFREATMKMAVMIFKR
Sbjct: 301  CQCCYDCHAGIHGEAFARRALAKIDELRQLELMSSSKSQEESRRYFREATMKMAVMIFKR 360

Query: 361  GVFESRRKNKAVFRPKIRINLREVQTLSWPRTVTERLLDEMFDSTASQFLAVLEALSDSN 420
            GVFESRRKNKAVFRPKIRINLREVQTLSWPRTVTERLLDEMFDSTASQFLAVLEALSDSN
Sbjct: 361  GVFESRRKNKAVFRPKIRINLREVQTLSWPRTVTERLLDEMFDSTASQFLAVLEALSDSN 420

Query: 421  RRILQTGPIVTDEVEIHDVVSELFMAGKELLIMSNIGADGMLDFPKTSLLELMIGRKDVI 480
            RRILQTGPIVTDEVEIHDVVSELFMAGKELLIMSNIGADGMLDFPKTSLLELMIGRKDVI
Sbjct: 421  RRILQTGPIVTDEVEIHDVVSELFMAGKELLIMSNIGADGMLDFPKTSLLELMIGRKDVI 480

Query: 481  SVDAAVKFIKLAFTYEEWSLFESSAVHLIYFLQRQDDPESKKAEKDLTLLIAMEPLINVK 540
            SVDAAVKFIKLAFTYEEWSLFESSAVHLIYFLQRQDDPESKKAEKDLTLLIAMEPLINVK
Sbjct: 481  SVDAAVKFIKLAFTYEEWSLFESSAVHLIYFLQRQDDPESKKAEKDLTLLIAMEPLINVK 540

Query: 541  RNKGLIFPLENYKEGQSAQIYFKKIAVHDTCLKTCGYSEDIFHLAATLYVCVCTAPQDVQ 600
            RNKGLIFPLENYKEGQSAQIYFKKIAVHDTCLKTCGYSEDIFHLAATLYVCVCTAPQDVQ
Sbjct: 541  RNKGLIFPLENYKEGQSAQIYFKKIAVHDTCLKTCGYSEDIFHLAATLYVCVCTAPQDVQ 600

Query: 601  PDKEIVVDTIMFLWQKCKLGIQRLNISRNDYAKFTQKISTNKWIYLLWQINEVIHCYKME 660
            PDKEIVVDTIMFLWQKCKLGIQRLNISRNDYAKFTQKISTNKWIYLLWQINEVIHCYKME
Sbjct: 601  PDKEIVVDTIMFLWQKCKLGIQRLNISRNDYAKFTQKISTNKWIYLLWQINEVIHCYKME 660

Query: 661  DIDIVVVAEVTLRLSEILESLGSPGRKFKQSLVLQTPTVSKDISTKGPEKLKQSGSTDCF 720
            DIDIVVVAEVTLRLSEILESLGSPGRKFKQSLVLQTPTVSKDISTKGPEKLKQSGSTDCF
Sbjct: 661  DIDIVVVAEVTLRLSEILESLGSPGRKFKQSLVLQTPTVSKDISTKGPEKLKQSGSTDCF 720

Query: 721  TELNIMNKIKKNTLSKAIYLMQKALLIFEKDATSTSSWELLMEAYSLIQRIEAEQNALYS 780
            TELNIMNKIKKNTLSKAIYLMQKALLIFEKDATSTSSWELLMEAYSLIQRIEAEQNALYS
Sbjct: 721  TELNIMNKIKKNTLSKAIYLMQKALLIFEKDATSTSSWELLMEAYSLIQRIEAEQNALYS 780

Query: 781  YQKYLESSKRKKSRVPPPPILLSRTHCSVTLKPAPFTSEVKAHFSRRQVSWYCILGCKAE 840
            YQKYLESSKRKKSRVPPPPILLSRTHCSVTLKPAPFTSEVKAHFSRRQVSWYCILGCKAE
Sbjct: 781  YQKYLESSKRKKSRVPPPPILLSRTHCSVTLKPAPFTSEVKAHFSRRQVSWYCILGCKAE 840

Query: 841  GSYGKVRLNNNHLPNSGEAIPADGKSVFEVKGLETNEKYVFAVAAYSNNGKLVGGAIGET 900
            GSYGKVRLNNNHLPNSGEAIPADGKSVFEVKGLETNEKYVFAVAAYSNNGKLVGGAIGET
Sbjct: 841  GSYGKVRLNNNHLPNSGEAIPADGKSVFEVKGLETNEKYVFAVAAYSNNGKLVGGAIGET 900

Query: 901  TKPILVYPPLSTITARMFLTQVAYQVGNYELAKKVFSPVWDYFVASPLQDEQSVICLSNI 960
            TKPILVYPPLSTITARMFLTQVAYQVGNYELAKKVFSPVWDYFVASPLQDEQSVICLSNI
Sbjct: 901  TKPILVYPPLSTITARMFLTQVAYQVGNYELAKKVFSPVWDYFVASPLQDEQSVICLSNI 960

Query: 961  ITITQRRNIFVTSDIKIKEENLFCDNIKGNEIFPSQQIARLIECERVLVALELSNFLNDS 1020
            ITITQRRNIFVTSDIKIKEENLFCDNIKGNEIFPSQQIARLIECERVLVALELSNFLNDS
Sbjct: 961  ITITQRRNIFVTSDIKIKEENLFCDNIKGNEIFPSQQIARLIECERVLVALELSNFLNDS 1020

Query: 1021 SYALQAVTQCYGLLAPIIYHNIVLVPVVQILRSWREYDLAVMIINYGKKMLDITPGCKSL 1080
            SYALQAVTQCYGLLAPIIYHNIVLVPVVQILRSWREYDLAVMIINYGKKMLDITPGCKSL
Sbjct: 1021 SYALQAVTQCYGLLAPIIYHNIVLVPVVQILRSWREYDLAVMIINYGKKMLDITPGCKSL 1080

Query: 1081 FDGSNEQEEMPEEDSSKKSLKTKKPQQILLPEKINEQLALLETHLLKLTKQYVTSELSGG 1140
            FDGSNEQEEMPEEDSSKKSLKTKKPQQILLPEKINEQLALLETHLLKLTKQYVTSELSGG
Sbjct: 1081 FDGSNEQEEMPEEDSSKKSLKTKKPQQILLPEKINEQLALLETHLLKLTKQYVTSELSGG 1140

Query: 1141 EDPIFLYPVVLNWSVKGAVKEVMKFKQKPRFLEFFTQVMLKCMNEEKFHLMVEVTTPVHD 1200
            EDPIFLYPVVLNWSVKGAVKEVMKFKQKPRFLEFFTQVMLKCMNEEKFHLMVEVTTPVHD
Sbjct: 1141 EDPIFLYPVVLNWSVKGAVKEVMKFKQKPRFLEFFTQVMLKCMNEEKFHLMVEVTTPVHD 1200

Query: 1201 FLKRIVTAEPGFQTTMGLGLSSSKLERRDQDGFGSSSNPWN 1241
            FLKRIVTAEPGFQTTMGLGLSSSKLERRDQDGFGSSSNPWN
Sbjct: 1201 FLKRIVTAEPGFQTTMGLGLSSSKLERRDQDGFGSSSNPWN 1241


>gi|169203876 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1241

 Score = 2469 bits (6398), Expect = 0.0
 Identities = 1239/1241 (99%), Positives = 1239/1241 (99%)

Query: 1    MAAQGSPSSSPSDDSTTSGSLPELPPTSTATSRSPPESKGSSRSSLLQWTCPEDSLPLAV 60
            MAAQGSPSSSPSDDSTTSGSLPELPPTSTATSRSPPESKGSSRSSLLQWTCPEDSLPLAV
Sbjct: 1    MAAQGSPSSSPSDDSTTSGSLPELPPTSTATSRSPPESKGSSRSSLLQWTCPEDSLPLAV 60

Query: 61   FYGPLDAKNPLLASCEKEIQELLGFMRKKKALATTEEEKHEFRRRCATSLFNIWTKYAPR 120
            FYGPLDAKNPLLASCEKEIQELLGFMRKKKALATTEEEKHEFRRRCATSLFNIWTKYAPR
Sbjct: 61   FYGPLDAKNPLLASCEKEIQELLGFMRKKKALATTEEEKHEFRRRCATSLFNIWTKYAPR 120

Query: 121  LPADYYNEKLLKVGDSLCQMKEYKLALLQCYGRYLQQFNTNFDENKVDVTQFKATFFPKG 180
            LPADYYNEKLLKVGDSLCQMKEYKLALLQCYGRYLQQFNTNFDENKVDVTQFKATFFPKG
Sbjct: 121  LPADYYNEKLLKVGDSLCQMKEYKLALLQCYGRYLQQFNTNFDENKVDVTQFKATFFPKG 180

Query: 181  FKDKTAGLTFHALSGKNMCNYQLVCDSDENLKNKESVVQCLHILSSLRLIMQVALPQEHL 240
            FKDKTAGLTFHALSGKNMCNYQLVCDSDENLKNKESVVQCLHILSSLRLIMQVALPQEHL
Sbjct: 181  FKDKTAGLTFHALSGKNMCNYQLVCDSDENLKNKESVVQCLHILSSLRLIMQVALPQEHL 240

Query: 241  CWIIFNGTIYIYTICRKLMVIGQSSKALEYLLWASMCMESLVPLLSLRYLTWRATLYTAV 300
            CWIIFNGTIYIYTICRKLMVIGQSSKALEYLLWASMCMESLVPLLSLRYLTWRATLYTAV
Sbjct: 241  CWIIFNGTIYIYTICRKLMVIGQSSKALEYLLWASMCMESLVPLLSLRYLTWRATLYTAV 300

Query: 301  CQCCYDCHAGIHGEAFARRALAKIDELRQLELMSSSKSQEESRRYFREATMKMAVMIFKR 360
            CQCCYDCHAGIHGEAFARRALAKIDELRQLELMSSSKSQEESRRYFREATMKMAVMIFKR
Sbjct: 301  CQCCYDCHAGIHGEAFARRALAKIDELRQLELMSSSKSQEESRRYFREATMKMAVMIFKR 360

Query: 361  GVFESRRKNKAVFRPKIRINLREVQTLSWPRTVTERLLDEMFDSTASQFLAVLEALSDSN 420
            GVFESRRKNKAVFRPKIRINLREVQTLSWPRTVTERLLDEMFDSTASQFLAVLEALSDSN
Sbjct: 361  GVFESRRKNKAVFRPKIRINLREVQTLSWPRTVTERLLDEMFDSTASQFLAVLEALSDSN 420

Query: 421  RRILQTGPIVTDEVEIHDVVSELFMAGKELLIMSNIGADGMLDFPKTSLLELMIGRKDVI 480
            RRILQTGPIVTDEVEIHDVVSELFMAGKELLIMSNIGADGMLDFPKTSLLELMIGRKDVI
Sbjct: 421  RRILQTGPIVTDEVEIHDVVSELFMAGKELLIMSNIGADGMLDFPKTSLLELMIGRKDVI 480

Query: 481  SVDAAVKFIKLAFTYEEWSLFESSAVHLIYFLQRQDDPESKKAEKDLTLLIAMEPLINVK 540
            SVDAAVKFIKLAFTYEEWSLFESSAVHLIYFLQRQDDPESKKAEKDLTLLIAMEPLINVK
Sbjct: 481  SVDAAVKFIKLAFTYEEWSLFESSAVHLIYFLQRQDDPESKKAEKDLTLLIAMEPLINVK 540

Query: 541  RNKGLIFPLENYKEGQSAQIYFKKIAVHDTCLKTCGYSEDIFHLAATLYVCVCTAPQDVQ 600
            RNKGLIFPLENYKEGQS QIY KKIAVHDTCLKTCGYSEDIFHLAATLYVCVCTAPQDVQ
Sbjct: 541  RNKGLIFPLENYKEGQSTQIYLKKIAVHDTCLKTCGYSEDIFHLAATLYVCVCTAPQDVQ 600

Query: 601  PDKEIVVDTIMFLWQKCKLGIQRLNISRNDYAKFTQKISTNKWIYLLWQINEVIHCYKME 660
            PDKEIVVDTIMFLWQKCKLGIQRLNISRNDYAKFTQKISTNKWIYLLWQINEVIHCYKME
Sbjct: 601  PDKEIVVDTIMFLWQKCKLGIQRLNISRNDYAKFTQKISTNKWIYLLWQINEVIHCYKME 660

Query: 661  DIDIVVVAEVTLRLSEILESLGSPGRKFKQSLVLQTPTVSKDISTKGPEKLKQSGSTDCF 720
            DIDIVVVAEVTLRLSEILESLGSPGRKFKQSLVLQTPTVSKDISTKGPEKLKQSGSTDCF
Sbjct: 661  DIDIVVVAEVTLRLSEILESLGSPGRKFKQSLVLQTPTVSKDISTKGPEKLKQSGSTDCF 720

Query: 721  TELNIMNKIKKNTLSKAIYLMQKALLIFEKDATSTSSWELLMEAYSLIQRIEAEQNALYS 780
            TELNIMNKIKKNTLSKAIYLMQKALLIFEKDATSTSSWELLMEAYSLIQRIEAEQNALYS
Sbjct: 721  TELNIMNKIKKNTLSKAIYLMQKALLIFEKDATSTSSWELLMEAYSLIQRIEAEQNALYS 780

Query: 781  YQKYLESSKRKKSRVPPPPILLSRTHCSVTLKPAPFTSEVKAHFSRRQVSWYCILGCKAE 840
            YQKYLESSKRKKSRVPPPPILLSRTHCSVTLKPAPFTSEVKAHFSRRQVSWYCILGCKAE
Sbjct: 781  YQKYLESSKRKKSRVPPPPILLSRTHCSVTLKPAPFTSEVKAHFSRRQVSWYCILGCKAE 840

Query: 841  GSYGKVRLNNNHLPNSGEAIPADGKSVFEVKGLETNEKYVFAVAAYSNNGKLVGGAIGET 900
            GSYGKVRLNNNHLPNSGEAIPADGKSVFEVKGLETNEKYVFAVAAYSNNGKLVGGAIGET
Sbjct: 841  GSYGKVRLNNNHLPNSGEAIPADGKSVFEVKGLETNEKYVFAVAAYSNNGKLVGGAIGET 900

Query: 901  TKPILVYPPLSTITARMFLTQVAYQVGNYELAKKVFSPVWDYFVASPLQDEQSVICLSNI 960
            TKPILVYPPLSTITARMFLTQVAYQVGNYELAKKVFSPVWDYFVASPLQDEQSVICLSNI
Sbjct: 901  TKPILVYPPLSTITARMFLTQVAYQVGNYELAKKVFSPVWDYFVASPLQDEQSVICLSNI 960

Query: 961  ITITQRRNIFVTSDIKIKEENLFCDNIKGNEIFPSQQIARLIECERVLVALELSNFLNDS 1020
            ITITQRRNIFVTSDIKIKEENLFCDNIKGNEIFPSQQIARLIECERVLVALELSNFLNDS
Sbjct: 961  ITITQRRNIFVTSDIKIKEENLFCDNIKGNEIFPSQQIARLIECERVLVALELSNFLNDS 1020

Query: 1021 SYALQAVTQCYGLLAPIIYHNIVLVPVVQILRSWREYDLAVMIINYGKKMLDITPGCKSL 1080
            SYALQAVTQCYGLLAPIIYHNIVLVPVVQILRSWREYDLAVMIINYGKKMLDITPGCKSL
Sbjct: 1021 SYALQAVTQCYGLLAPIIYHNIVLVPVVQILRSWREYDLAVMIINYGKKMLDITPGCKSL 1080

Query: 1081 FDGSNEQEEMPEEDSSKKSLKTKKPQQILLPEKINEQLALLETHLLKLTKQYVTSELSGG 1140
            FDGSNEQEEMPEEDSSKKSLKTKKPQQILLPEKINEQLALLETHLLKLTKQYVTSELSGG
Sbjct: 1081 FDGSNEQEEMPEEDSSKKSLKTKKPQQILLPEKINEQLALLETHLLKLTKQYVTSELSGG 1140

Query: 1141 EDPIFLYPVVLNWSVKGAVKEVMKFKQKPRFLEFFTQVMLKCMNEEKFHLMVEVTTPVHD 1200
            EDPIFLYPVVLNWSVKGAVKEVMKFKQKPRFLEFFTQVMLKCMNEEKFHLMVEVTTPVHD
Sbjct: 1141 EDPIFLYPVVLNWSVKGAVKEVMKFKQKPRFLEFFTQVMLKCMNEEKFHLMVEVTTPVHD 1200

Query: 1201 FLKRIVTAEPGFQTTMGLGLSSSKLERRDQDGFGSSSNPWN 1241
            FLKRIVTAEPGFQTTMGLGLSSSKLERRDQDGFGSSSNPWN
Sbjct: 1201 FLKRIVTAEPGFQTTMGLGLSSSKLERRDQDGFGSSSNPWN 1241


>gi|169204921 PREDICTED: chromosome 12 open reading frame 55 [Homo
           sapiens]
          Length = 935

 Score = 1816 bits (4705), Expect = 0.0
 Identities = 914/922 (99%), Positives = 915/922 (99%), Gaps = 7/922 (0%)

Query: 1   MAAQGSPSSSPSDDSTTSGSLPELPPTSTATSRSPPESKGSSRSSLLQWTCPEDSLPLAV 60
           MAAQGSPSSSPSDDSTTSGSLPELPPTSTATSRSPPESKGSSRSSLLQWTCPEDSLPLAV
Sbjct: 1   MAAQGSPSSSPSDDSTTSGSLPELPPTSTATSRSPPESKGSSRSSLLQWTCPEDSLPLAV 60

Query: 61  FYGPLDAKNPLLASCEKEIQELLGFMRKKKALATTEEEKHEFRRRCATSLFNIWTKYAPR 120
           FYGPLDAKNPLLASCEKEIQELLGFMRKKKALATTEEEKHEFRRRCATSLFNIWTKYAPR
Sbjct: 61  FYGPLDAKNPLLASCEKEIQELLGFMRKKKALATTEEEKHEFRRRCATSLFNIWTKYAPR 120

Query: 121 LPADYYNEKLLKVGDSLCQMKEYKLALLQCYGRYLQQFNTNFDENKVDVTQFKATFFPKG 180
           LPADYYNEKLLKVGDSLCQMKEYKLALLQCYGRYLQQFNTNFDENKVDVTQFKATFFPKG
Sbjct: 121 LPADYYNEKLLKVGDSLCQMKEYKLALLQCYGRYLQQFNTNFDENKVDVTQFKATFFPKG 180

Query: 181 FKDKTAGLTFHALSGKNMCNYQLVCDSDENLKNKESVVQCLHILSSLRLIMQVALPQEHL 240
           FKDKTAGLTFHALSGKNMCNYQLVCDSDENLKNKESVVQCLHILSSLRLIMQVALPQEHL
Sbjct: 181 FKDKTAGLTFHALSGKNMCNYQLVCDSDENLKNKESVVQCLHILSSLRLIMQVALPQEHL 240

Query: 241 CWIIFNGTIYIYTICRKLMVIGQSSKALEYLLWASMCMESLVPLLSLRYLTWRATLYTAV 300
           CWIIFNGTIYIYTICRKLMVIGQSSKALEYLLWASMCMESLVPLLSLRYLTWRATLYTAV
Sbjct: 241 CWIIFNGTIYIYTICRKLMVIGQSSKALEYLLWASMCMESLVPLLSLRYLTWRATLYTAV 300

Query: 301 CQCCYDCHAGIHGEAFARRALAKIDELRQLELMSSSKSQEESRRYFREATMKMAVMIFKR 360
           CQCCYDCHAGIHGEAFARRALAKIDELRQLELMSSSKSQEESRRYFREATMKMAVMIFKR
Sbjct: 301 CQCCYDCHAGIHGEAFARRALAKIDELRQLELMSSSKSQEESRRYFREATMKMAVMIFKR 360

Query: 361 GVFESRRKNKAVFRPKIRINLREVQTLSWPRTVTERLLDEMFDSTASQFLAVLEALSDSN 420
           GVFESRRKNKAVFRPKIRINLREVQTLSWPRTVTERLLDEMFDSTASQFLAVLEALSDSN
Sbjct: 361 GVFESRRKNKAVFRPKIRINLREVQTLSWPRTVTERLLDEMFDSTASQFLAVLEALSDSN 420

Query: 421 RRILQTGPIVTDEVEIHDVVSELFMAGKELLIMSNIGADGMLDFPKTSLLELMIGRKDVI 480
           RRILQTGPIVTDEVEIHDVVSELFMAGKELLIMSNIGADGMLDFPKTSLLELMIGRKDVI
Sbjct: 421 RRILQTGPIVTDEVEIHDVVSELFMAGKELLIMSNIGADGMLDFPKTSLLELMIGRKDVI 480

Query: 481 SVDAAVKFIKLAFTYEEWSLFESSAVHLIYFLQRQDDPESKKAEKDLTLLIAMEPLINVK 540
           SVDAAVKFIKLAFTYEEWSLFESSAVHLIYFLQRQDDPESKKAEKDLTLLIAMEPLINVK
Sbjct: 481 SVDAAVKFIKLAFTYEEWSLFESSAVHLIYFLQRQDDPESKKAEKDLTLLIAMEPLINVK 540

Query: 541 RNKGLIFPLENYKEGQSAQIYFKKIAVHDTCLKTCGYSEDIFHLAATLYVCVCTAPQDVQ 600
           RNKGLIFPLENYKEGQSAQIYFKKIAVHDTCLKTCGYSEDIFHLAATLYVCVCTAPQDVQ
Sbjct: 541 RNKGLIFPLENYKEGQSAQIYFKKIAVHDTCLKTCGYSEDIFHLAATLYVCVCTAPQDVQ 600

Query: 601 PDKEIVVDTIMFLWQKCKLGIQRLNISRNDYAKFTQKISTNKWIYLLWQINEVIHCYKME 660
           PDKEIVVDTIMFLWQKCKLGIQRLNISRNDYAKFTQKISTNKWIYLLWQINEVIHCYKME
Sbjct: 601 PDKEIVVDTIMFLWQKCKLGIQRLNISRNDYAKFTQKISTNKWIYLLWQINEVIHCYKME 660

Query: 661 DIDIVVVAEVTLRLSEILESLGSPGRKFKQSLVLQTPTVSKDISTKGPEKLKQSGSTDCF 720
           DIDIVVVAEVTLRLSEILESLGSPGRKFKQSLVLQTPTVSKDISTKGPEKLKQSGSTDCF
Sbjct: 661 DIDIVVVAEVTLRLSEILESLGSPGRKFKQSLVLQTPTVSKDISTKGPEKLKQSGSTDCF 720

Query: 721 TELNIMNKIKKNTLSKAIYLMQKALLIFEKDATSTSSWELLMEAYSLIQRIEAEQNALYS 780
           TELNIMNKIKKNTLSKAIYLMQKALLIFEKDATSTSSWELLMEAYSLIQRIEAEQNALYS
Sbjct: 721 TELNIMNKIKKNTLSKAIYLMQKALLIFEKDATSTSSWELLMEAYSLIQRIEAEQNALYS 780

Query: 781 YQKYLESSKRKKSRVPPPPILLSRTHCSVTLKPAPFTSEVKAHFSRRQVSWYCILGCKAE 840
           YQKYLESSKRKKSRVPPPPILLSRTHCSVTLKPAPFTSEVK       VSWYCILGCKAE
Sbjct: 781 YQKYLESSKRKKSRVPPPPILLSRTHCSVTLKPAPFTSEVK-------VSWYCILGCKAE 833

Query: 841 GSYGKVRLNNNHLPNSGEAIPADGKSVFEVKGLETNEKYVFAVAAYSNNGKLVGGAIGET 900
           GSYGKVRLNNNHLPNSGEAIPADGKSVFEVKGLETNEKYVFAVAAYSNNGKLVGGAIGET
Sbjct: 834 GSYGKVRLNNNHLPNSGEAIPADGKSVFEVKGLETNEKYVFAVAAYSNNGKLVGGAIGET 893

Query: 901 TKPILVYPPLSTITARMFLTQV 922
           TKPILVYPPLSTITARMFLTQ+
Sbjct: 894 TKPILVYPPLSTITARMFLTQL 915


>gi|19923597 Sin3A-associated protein, 130kDa isoform b [Homo
           sapiens]
          Length = 1048

 Score = 34.7 bits (78), Expect = 0.58
 Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 4/75 (5%)

Query: 1   MAAQGSPSSSPSDD-STTSGSLPELPPTSTATSRSPPE-SKGSSRSSLLQWTCPEDSLPL 58
           M A  SP S P+   ST  G++P  PP +T  +  PP  + G S SS+L    PE  +  
Sbjct: 727 MIAAASPPSQPAVALSTIPGAVPITPPITTIAAAPPPSVTVGGSLSSVLGPPVPEIKVKE 786

Query: 59  AVFYGPLDAKNPLLA 73
            V   P+D   P+ A
Sbjct: 787 EV--EPMDIMRPVSA 799


>gi|225579127 Sin3A-associated protein, 130kDa isoform a [Homo
           sapiens]
          Length = 1083

 Score = 34.7 bits (78), Expect = 0.58
 Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 4/75 (5%)

Query: 1   MAAQGSPSSSPSDD-STTSGSLPELPPTSTATSRSPPE-SKGSSRSSLLQWTCPEDSLPL 58
           M A  SP S P+   ST  G++P  PP +T  +  PP  + G S SS+L    PE  +  
Sbjct: 762 MIAAASPPSQPAVALSTIPGAVPITPPITTIAAAPPPSVTVGGSLSSVLGPPVPEIKVKE 821

Query: 59  AVFYGPLDAKNPLLA 73
            V   P+D   P+ A
Sbjct: 822 EV--EPMDIMRPVSA 834


>gi|163792201 Shaw-related voltage-gated potassium channel protein 1
           isoform A [Homo sapiens]
          Length = 585

 Score = 33.9 bits (76), Expect = 0.99
 Identities = 26/92 (28%), Positives = 37/92 (40%), Gaps = 3/92 (3%)

Query: 789 KRKKSRVPPPPILLSRTHC-SVTLKPAPFTSEVKAHFSRRQVSWYCILGCKAEGSYGKVR 847
           K+KK  +P PP L S  +C SV   P   T       ++ ++        K  G   K  
Sbjct: 454 KKKKKHIPRPPQLGSPNYCKSVVNSPHHSTQSDTCPLAQEEILEINRADSKLNGEVAKAA 513

Query: 848 LNNNHLPNSGEAIPADGKSVFEVKGLETNEKY 879
           L N   P+  +A+  D    F   G  T E+Y
Sbjct: 514 LANEDCPHIDQALTPDEGLPFTRSG--TRERY 543


>gi|21450645 tetratricopeptide repeat domain 16 [Homo sapiens]
          Length = 873

 Score = 33.9 bits (76), Expect = 0.99
 Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 10/125 (8%)

Query: 992  IFPSQQIARLIECERV-LVALELSNFLNDSSYALQAVTQCYGLLAPIIYHNIVLVPVVQI 1050
            +FP   +  ++  +   L  L+L   +  S   LQA +   G++  +  H +     + +
Sbjct: 483  LFPGMSVEEVLSTQIAHLARLQLEQMVEGS---LQAGSP-QGIVGMLKRHELERQKALAL 538

Query: 1051 LRSWREYDLAVMIINYGKKMLDITPGCKSLFDGSNEQE-EMPEEDSSKKSLKTKKPQQIL 1109
              SW++ +  +       + L  TP    +  GS+E E E PEE+  K+  K ++ +  L
Sbjct: 539  QHSWKQGEPLIAT----SEELKATPEIPQVKPGSSEGEAEAPEEEEEKEKEKKEEKKSEL 594

Query: 1110 LPEKI 1114
            +P K+
Sbjct: 595  IPSKV 599


>gi|58761508 midnolin [Homo sapiens]
          Length = 468

 Score = 32.3 bits (72), Expect = 2.9
 Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 6/57 (10%)

Query: 2   AAQGSPS-----SSPSDDSTTSGSLPELPPTSTATSRSPPESKGSSRSSLLQWTCPE 53
           AA+G PS     SSP    +++  +P +P TS + +   P + GS RS     TCPE
Sbjct: 177 AARGDPSIASPVSSPCRPVSSAARVPPVP-TSPSPASPSPITAGSFRSHAASTTCPE 232


>gi|24308527 stereocilin [Homo sapiens]
          Length = 1775

 Score = 32.0 bits (71), Expect = 3.8
 Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 3/33 (9%)

Query: 796 PPPPILLSRTHCSVTLKPAPFTSEVKAHFSRRQ 828
           PPPP LL   HC  T  P P  S+  AH S RQ
Sbjct: 313 PPPPALL---HCLSTGVPLPRASQPSAHISPRQ 342


>gi|34452709 bromodomain containing 8 isoform 3 [Homo sapiens]
          Length = 757

 Score = 32.0 bits (71), Expect = 3.8
 Identities = 32/152 (21%), Positives = 67/152 (44%), Gaps = 12/152 (7%)

Query: 1088 EEMPEEDSSKKSLKTKKPQQILLPEKINEQLALL------ETHLLKLTKQYVTSELSGGE 1141
            + +P   +S +     + Q+ +  +KI ++  +L            +  Q VT +++ G 
Sbjct: 579  DSIPSSPASSQFSVCSEDQEAIQAQKIWKKAIMLVWRAAANHRYANVFLQPVTDDIAPGY 638

Query: 1142 DPIFLYPVVLNWSVK----GAVKEVMKFKQKPRFLEFFTQVMLKCMNEEKFHLMVEVTTP 1197
              I   P+ L+   K    G ++   +F Q+   L F   VM    + + +H+ VE+   
Sbjct: 639  HSIVQRPMDLSTIKKNIENGLIRSTAEF-QRDIMLMFQNAVMYNSSDHDVYHMAVEMQRD 697

Query: 1198 VHDFLKRIVTAEPGFQTTMGLGLSSSKLERRD 1229
            V + +++ +  +   QT+   G+S+  L  RD
Sbjct: 698  VLEQIQQFLATQLIMQTSES-GISAKSLRGRD 728


>gi|34452707 bromodomain containing 8 isoform 2 [Homo sapiens]
          Length = 1235

 Score = 32.0 bits (71), Expect = 3.8
 Identities = 32/152 (21%), Positives = 67/152 (44%), Gaps = 12/152 (7%)

Query: 1088 EEMPEEDSSKKSLKTKKPQQILLPEKINEQLALL------ETHLLKLTKQYVTSELSGGE 1141
            + +P   +S +     + Q+ +  +KI ++  +L            +  Q VT +++ G 
Sbjct: 685  DSIPSSPASSQFSVCSEDQEAIQAQKIWKKAIMLVWRAAANHRYANVFLQPVTDDIAPGY 744

Query: 1142 DPIFLYPVVLNWSVK----GAVKEVMKFKQKPRFLEFFTQVMLKCMNEEKFHLMVEVTTP 1197
              I   P+ L+   K    G ++   +F Q+   L F   VM    + + +H+ VE+   
Sbjct: 745  HSIVQRPMDLSTIKKNIENGLIRSTAEF-QRDIMLMFQNAVMYNSSDHDVYHMAVEMQRD 803

Query: 1198 VHDFLKRIVTAEPGFQTTMGLGLSSSKLERRD 1229
            V + +++ +  +   QT+   G+S+  L  RD
Sbjct: 804  VLEQIQQFLATQLIMQTSES-GISAKSLRGRD 834


>gi|34452705 bromodomain containing 8 isoform 1 [Homo sapiens]
          Length = 951

 Score = 32.0 bits (71), Expect = 3.8
 Identities = 32/152 (21%), Positives = 67/152 (44%), Gaps = 12/152 (7%)

Query: 1088 EEMPEEDSSKKSLKTKKPQQILLPEKINEQLALL------ETHLLKLTKQYVTSELSGGE 1141
            + +P   +S +     + Q+ +  +KI ++  +L            +  Q VT +++ G 
Sbjct: 758  DSIPSSPASSQFSVCSEDQEAIQAQKIWKKAIMLVWRAAANHRYANVFLQPVTDDIAPGY 817

Query: 1142 DPIFLYPVVLNWSVK----GAVKEVMKFKQKPRFLEFFTQVMLKCMNEEKFHLMVEVTTP 1197
              I   P+ L+   K    G ++   +F Q+   L F   VM    + + +H+ VE+   
Sbjct: 818  HSIVQRPMDLSTIKKNIENGLIRSTAEF-QRDIMLMFQNAVMYNSSDHDVYHMAVEMQRD 876

Query: 1198 VHDFLKRIVTAEPGFQTTMGLGLSSSKLERRD 1229
            V + +++ +  +   QT+   G+S+  L  RD
Sbjct: 877  VLEQIQQFLATQLIMQTSES-GISAKSLRGRD 907


>gi|40353729 Ras and Rab interactor 3 [Homo sapiens]
          Length = 985

 Score = 32.0 bits (71), Expect = 3.8
 Identities = 42/151 (27%), Positives = 61/151 (40%), Gaps = 21/151 (13%)

Query: 5   GSPSSSPSDDSTTSGSLPELPPTSTATSRSPPESKGSSRSSLLQWTCPEDSLPLAVFYGP 64
           G P    S  S      P  P  +TA S+S PE KGS  S         DSL ++V    
Sbjct: 496 GPPREGQSPASQAGTQHP--PAQATAHSQSSPEFKGSLASL-------SDSLGVSVMATD 546

Query: 65  LDAKNPLLASCEKEIQELLGFMRKKKALATTEEEKHEFRRRCATSLFNIWTKYAPRLPAD 124
            D+ +   +S E+E+++      KKK      + +H       +S+F+ +          
Sbjct: 547 QDSYS--TSSTEEELEQFSSPSVKKKPSMILGKARHRLSFASFSSMFHAFLS-------- 596

Query: 125 YYNEKLLKVGDSLCQMK-EYKLALLQCYGRY 154
             N KL K    L Q K  Y  +L+Q Y  Y
Sbjct: 597 -NNRKLYKKVVELAQDKGSYFGSLVQDYKVY 626


>gi|19743886 regulatory factor X4 isoform a [Homo sapiens]
          Length = 641

 Score = 31.2 bits (69), Expect = 6.4
 Identities = 17/47 (36%), Positives = 23/47 (48%)

Query: 2   AAQGSPSSSPSDDSTTSGSLPELPPTSTATSRSPPESKGSSRSSLLQ 48
           AA  +PS  PS     S +  E+PP S+  S   PE  G S +  +Q
Sbjct: 408 AAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQ 454


>gi|239750235 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 257

 Score = 31.2 bits (69), Expect = 6.4
 Identities = 17/39 (43%), Positives = 21/39 (53%)

Query: 7   PSSSPSDDSTTSGSLPELPPTSTATSRSPPESKGSSRSS 45
           PSSSPS  S+ S S P   P+S++    PP     S SS
Sbjct: 174 PSSSPSSSSSPSYSSPSSSPSSSSPLPPPPPPPSFSSSS 212


>gi|239744535 PREDICTED: hypothetical protein XP_002343184 [Homo
           sapiens]
          Length = 257

 Score = 31.2 bits (69), Expect = 6.4
 Identities = 17/39 (43%), Positives = 21/39 (53%)

Query: 7   PSSSPSDDSTTSGSLPELPPTSTATSRSPPESKGSSRSS 45
           PSSSPS  S+ S S P   P+S++    PP     S SS
Sbjct: 174 PSSSPSSSSSPSYSSPSSSPSSSSPLPPPPPPPSFSSSS 212


>gi|47132527 regulatory factor X4 isoform c [Homo sapiens]
          Length = 735

 Score = 31.2 bits (69), Expect = 6.4
 Identities = 17/47 (36%), Positives = 23/47 (48%)

Query: 2   AAQGSPSSSPSDDSTTSGSLPELPPTSTATSRSPPESKGSSRSSLLQ 48
           AA  +PS  PS     S +  E+PP S+  S   PE  G S +  +Q
Sbjct: 502 AAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQ 548


>gi|188219559 protein phosphatase 1, regulatory subunit 15B [Homo
           sapiens]
          Length = 713

 Score = 31.2 bits (69), Expect = 6.4
 Identities = 25/71 (35%), Positives = 30/71 (42%), Gaps = 8/71 (11%)

Query: 10  SPSDDSTTSGSLPELPPTSTATSRSPPESKGSSRSSLLQWT--CPEDSLPLAVFYGPLDA 67
           S  ++S+ SGSLPE P  S+       ES      SL  W   C  D       Y PL+ 
Sbjct: 518 SDLENSSQSGSLPETPEHSSG-EEDDWESSADEAESLKLWNSFCNSDDP-----YNPLNF 571

Query: 68  KNPLLASCEKE 78
           K P   S E E
Sbjct: 572 KAPFQTSGENE 582


>gi|239753555 PREDICTED: hypothetical protein XP_002345695 [Homo
           sapiens]
          Length = 258

 Score = 30.8 bits (68), Expect = 8.4
 Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 7/78 (8%)

Query: 782 QKYLESSKRKKSRVPPPPILLSRTHCSVTLKPAPFTSEVKAHFSRRQVSWYCILGCKAEG 841
           QK   S KR++ R+PPPP    ++      + +P   E+    SR      C   C+  G
Sbjct: 135 QKQWPSRKRERPRLPPPP-GSRKSRLRRWARASPHPGELAGLTSR-----LCPATCRGRG 188

Query: 842 SYGKVRLNNNHLPNSGEA 859
             G  R    H+P SG +
Sbjct: 189 R-GLARAQATHIPLSGHS 205


>gi|156105697 ring finger and CCCH-type zinc finger domains 2
           isoform 1 [Homo sapiens]
          Length = 1191

 Score = 30.8 bits (68), Expect = 8.4
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 3/55 (5%)

Query: 1   MAAQGSPSSSPSDDSTTS---GSLPELPPTSTATSRSPPESKGSSRSSLLQWTCP 52
           + A G  ++ PS DS T    GS P+ P ++ A + + P + G+  +S+ Q + P
Sbjct: 527 VGANGQNAAGPSADSVTENKIGSPPKTPVSNVAATSAGPSNVGTELNSVPQKSSP 581


>gi|156105699 ring finger and CCCH-type zinc finger domains 2
           isoform 2 [Homo sapiens]
          Length = 1064

 Score = 30.8 bits (68), Expect = 8.4
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 3/55 (5%)

Query: 1   MAAQGSPSSSPSDDSTTS---GSLPELPPTSTATSRSPPESKGSSRSSLLQWTCP 52
           + A G  ++ PS DS T    GS P+ P ++ A + + P + G+  +S+ Q + P
Sbjct: 527 VGANGQNAAGPSADSVTENKIGSPPKTPVSNVAATSAGPSNVGTELNSVPQKSSP 581


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.134    0.392 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,060,435
Number of Sequences: 37866
Number of extensions: 1957750
Number of successful extensions: 7586
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 7563
Number of HSP's gapped (non-prelim): 33
length of query: 1241
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1127
effective length of database: 13,930,794
effective search space: 15700004838
effective search space used: 15700004838
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.