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Search of human proteins with 169179753
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169179753 PREDICTED: similar to hCG1809973 [Homo sapiens]
(160 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169179753 PREDICTED: similar to hCG1809973 [Homo sapiens] 308 2e-84
gi|169183850 PREDICTED: similar to hCG1809973 [Homo sapiens] 275 9e-75
gi|169179690 PREDICTED: similar to ATP synthase, H+ transporting... 275 9e-75
gi|239743684 PREDICTED: hypothetical protein LOC138864 [Homo sap... 275 9e-75
gi|5453559 ATP synthase, H+ transporting, mitochondrial F0 compl... 227 4e-60
gi|51479152 ATP synthase, H+ transporting, mitochondrial F0 comp... 167 3e-42
gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens] 31 0.52
gi|91992162 mutL homolog 3 isoform 1 [Homo sapiens] 30 1.2
gi|91992160 mutL homolog 3 isoform 2 [Homo sapiens] 30 1.2
gi|205277396 dynactin 1 isoform 4 [Homo sapiens] 29 1.5
gi|205277392 dynactin 1 isoform 3 [Homo sapiens] 29 1.5
gi|13259508 dynactin 1 isoform 2 [Homo sapiens] 29 1.5
gi|13259510 dynactin 1 isoform 1 [Homo sapiens] 29 1.5
gi|186972148 enolase superfamily 1 isoform rTSalpha [Homo sapiens] 29 2.0
gi|42544119 enolase superfamily 1 isoform rTS beta [Homo sapiens] 29 2.0
gi|42544117 rTS beta protein isoform rTS gamma [Homo sapiens] 29 2.0
gi|120587023 down-regulated in metastasis [Homo sapiens] 28 4.4
gi|89036565 PREDICTED: similar to Temporarily Assigned Gene name... 28 4.4
gi|217035121 HMG-BOX transcription factor BBX isoform 1 [Homo sa... 28 4.4
gi|221219020 NYD-SP11 protein [Homo sapiens] 27 5.7
gi|150456432 unc-51-like kinase 3 [Homo sapiens] 27 5.7
gi|114431236 zinc finger protein 462 [Homo sapiens] 27 5.7
gi|125988395 jumonji domain containing 6 isoform 1 [Homo sapiens] 27 5.7
gi|125988389 jumonji domain containing 6 isoform 2 [Homo sapiens] 27 5.7
gi|154937330 sodium-dependent glucose transporter 1 [Homo sapiens] 27 5.7
gi|51944950 phosducin-like 2 [Homo sapiens] 27 5.7
gi|229577185 epidermal growth factor receptor pathway substrate ... 27 7.5
gi|4503593 epidermal growth factor receptor pathway substrate 15... 27 7.5
gi|197927452 dynein, axonemal, heavy chain 1 [Homo sapiens] 27 7.5
gi|4885583 Rho-associated, coiled-coil containing protein kinase... 27 9.8
>gi|169179753 PREDICTED: similar to hCG1809973 [Homo sapiens]
Length = 160
Score = 308 bits (788), Expect = 2e-84
Identities = 160/160 (100%), Positives = 160/160 (100%)
Query: 1 MAGQKLALKIIDWVTSWESISRNQKAIANSLTSWNEILTSRLAILPENKPSIDWTYYKAS 60
MAGQKLALKIIDWVTSWESISRNQKAIANSLTSWNEILTSRLAILPENKPSIDWTYYKAS
Sbjct: 1 MAGQKLALKIIDWVTSWESISRNQKAIANSLTSWNEILTSRLAILPENKPSIDWTYYKAS 60
Query: 61 VAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQLE 120
VAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQLE
Sbjct: 61 VAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQLE 120
Query: 121 KMRNLIPFDQTTTEDLXXXXXXXKLNPQMPVQTLAWQKVT 160
KMRNLIPFDQTTTEDL KLNPQMPVQTLAWQKVT
Sbjct: 121 KMRNLIPFDQTTTEDLXXXXXXXKLNPQMPVQTLAWQKVT 160
>gi|169183850 PREDICTED: similar to hCG1809973 [Homo sapiens]
Length = 144
Score = 275 bits (704), Expect = 9e-75
Identities = 136/136 (100%), Positives = 136/136 (100%)
Query: 1 MAGQKLALKIIDWVTSWESISRNQKAIANSLTSWNEILTSRLAILPENKPSIDWTYYKAS 60
MAGQKLALKIIDWVTSWESISRNQKAIANSLTSWNEILTSRLAILPENKPSIDWTYYKAS
Sbjct: 1 MAGQKLALKIIDWVTSWESISRNQKAIANSLTSWNEILTSRLAILPENKPSIDWTYYKAS 60
Query: 61 VAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQLE 120
VAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQLE
Sbjct: 61 VAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQLE 120
Query: 121 KMRNLIPFDQTTTEDL 136
KMRNLIPFDQTTTEDL
Sbjct: 121 KMRNLIPFDQTTTEDL 136
>gi|169179690 PREDICTED: similar to ATP synthase, H+ transporting,
mitochondrial F0 complex, subunit d [Homo sapiens]
Length = 144
Score = 275 bits (704), Expect = 9e-75
Identities = 136/136 (100%), Positives = 136/136 (100%)
Query: 1 MAGQKLALKIIDWVTSWESISRNQKAIANSLTSWNEILTSRLAILPENKPSIDWTYYKAS 60
MAGQKLALKIIDWVTSWESISRNQKAIANSLTSWNEILTSRLAILPENKPSIDWTYYKAS
Sbjct: 1 MAGQKLALKIIDWVTSWESISRNQKAIANSLTSWNEILTSRLAILPENKPSIDWTYYKAS 60
Query: 61 VAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQLE 120
VAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQLE
Sbjct: 61 VAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQLE 120
Query: 121 KMRNLIPFDQTTTEDL 136
KMRNLIPFDQTTTEDL
Sbjct: 121 KMRNLIPFDQTTTEDL 136
>gi|239743684 PREDICTED: hypothetical protein LOC138864 [Homo
sapiens]
Length = 144
Score = 275 bits (704), Expect = 9e-75
Identities = 136/136 (100%), Positives = 136/136 (100%)
Query: 1 MAGQKLALKIIDWVTSWESISRNQKAIANSLTSWNEILTSRLAILPENKPSIDWTYYKAS 60
MAGQKLALKIIDWVTSWESISRNQKAIANSLTSWNEILTSRLAILPENKPSIDWTYYKAS
Sbjct: 1 MAGQKLALKIIDWVTSWESISRNQKAIANSLTSWNEILTSRLAILPENKPSIDWTYYKAS 60
Query: 61 VAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQLE 120
VAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQLE
Sbjct: 61 VAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQLE 120
Query: 121 KMRNLIPFDQTTTEDL 136
KMRNLIPFDQTTTEDL
Sbjct: 121 KMRNLIPFDQTTTEDL 136
>gi|5453559 ATP synthase, H+ transporting, mitochondrial F0 complex,
subunit d isoform a [Homo sapiens]
Length = 161
Score = 227 bits (578), Expect = 4e-60
Identities = 115/161 (71%), Positives = 129/161 (80%), Gaps = 7/161 (4%)
Query: 1 MAGQKLALKIIDWVTSWESISRNQKAIANSLTSWNEILTSRLAILPENKPSIDWTYYKAS 60
MAG+KLALK IDWV E I +NQKAIA+SL SWNE LTSRLA LPEN P+IDW YYKA+
Sbjct: 1 MAGRKLALKTIDWVAFAEIIPQNQKAIASSLKSWNETLTSRLAALPENPPAIDWAYYKAN 60
Query: 61 VAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQLE 120
VAKAGLVDDFEKKFNALK PVPEDKYTAQVDAEEKEDVK+CAEW+SLSKARI +YEK++E
Sbjct: 61 VAKAGLVDDFEKKFNALKVPVPEDKYTAQVDAEEKEDVKSCAEWVSLSKARIVEYEKEME 120
Query: 121 KMRNLIPFDQTTTEDLXXXXXXXKLN-------PQMPVQTL 154
KM+NLIPFDQ T EDL KL+ P P++ L
Sbjct: 121 KMKNLIPFDQMTIEDLNEAFPETKLDKKKYPYWPHQPIENL 161
>gi|51479152 ATP synthase, H+ transporting, mitochondrial F0
complex, subunit d isoform b [Homo sapiens]
Length = 137
Score = 167 bits (424), Expect = 3e-42
Identities = 92/161 (57%), Positives = 106/161 (65%), Gaps = 31/161 (19%)
Query: 1 MAGQKLALKIIDWVTSWESISRNQKAIANSLTSWNEILTSRLAILPENKPSIDWTYYKAS 60
MAG+KLALK IDWV E I +NQKAIA+SL SWNE LTSRLA LPEN P+IDW YYKA+
Sbjct: 1 MAGRKLALKTIDWVAFAEIIPQNQKAIASSLKSWNETLTSRLAALPENPPAIDWAYYKAN 60
Query: 61 VAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQLE 120
VAKAGLVDDFEKK VK+CAEW+SLSKARI +YEK++E
Sbjct: 61 VAKAGLVDDFEKK------------------------VKSCAEWVSLSKARIVEYEKEME 96
Query: 121 KMRNLIPFDQTTTEDLXXXXXXXKLN-------PQMPVQTL 154
KM+NLIPFDQ T EDL KL+ P P++ L
Sbjct: 97 KMKNLIPFDQMTIEDLNEAFPETKLDKKKYPYWPHQPIENL 137
>gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens]
Length = 1684
Score = 30.8 bits (68), Expect = 0.52
Identities = 28/132 (21%), Positives = 51/132 (38%), Gaps = 17/132 (12%)
Query: 22 RNQKAIANSLTSWNEILTSRLAILPENKPSIDWTYYKASVAKAGLVDDFE---------- 71
RN ++ S NE L +R+ L N ++ + AKA + + E
Sbjct: 1055 RNSTLQCETINSDNEDLLARIETLQSNAKLLEVQILEVQRAKAMVDKELEAEKLQKEQKI 1114
Query: 72 -------KKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQLEKMRN 124
+ L+ + ++K Q +E E VK A+ +L I YE+ ++++
Sbjct: 1115 KEHATTVNELEELQVQLQKEKKQLQKTMQELELVKKDAQQTTLMNMEIADYERLMKELNQ 1174
Query: 125 LIPFDQTTTEDL 136
+ EDL
Sbjct: 1175 KLTNKNNKIEDL 1186
>gi|91992162 mutL homolog 3 isoform 1 [Homo sapiens]
Length = 1453
Score = 29.6 bits (65), Expect = 1.2
Identities = 34/140 (24%), Positives = 56/140 (40%), Gaps = 19/140 (13%)
Query: 12 DWVTSWESISRNQKAIANSLTSWNEILTSRLAILPENKPSIDW----TYYKASVAKAGLV 67
D T S ++N K +NS T+ N +++ +LP N + +AS + G +
Sbjct: 939 DSATQDNSFNKNSKTHSNSNTTENCVISETPLVLPYNNSKVTGKDSDVLIRASEQQIGSL 998
Query: 68 D-----------DFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYE 116
D D N + F E K A+ +E +E C++W +G+
Sbjct: 999 DSPSGMLMNPVEDATGDQNGICFQSEESK--ARACSETEESNTCCSDWQRHFDVALGRM- 1055
Query: 117 KQLEKMRNLIPFDQTTTEDL 136
+ KM L F TED+
Sbjct: 1056 VYVNKMTGLSTF-IAPTEDI 1074
>gi|91992160 mutL homolog 3 isoform 2 [Homo sapiens]
Length = 1429
Score = 29.6 bits (65), Expect = 1.2
Identities = 34/140 (24%), Positives = 56/140 (40%), Gaps = 19/140 (13%)
Query: 12 DWVTSWESISRNQKAIANSLTSWNEILTSRLAILPENKPSIDW----TYYKASVAKAGLV 67
D T S ++N K +NS T+ N +++ +LP N + +AS + G +
Sbjct: 939 DSATQDNSFNKNSKTHSNSNTTENCVISETPLVLPYNNSKVTGKDSDVLIRASEQQIGSL 998
Query: 68 D-----------DFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYE 116
D D N + F E K A+ +E +E C++W +G+
Sbjct: 999 DSPSGMLMNPVEDATGDQNGICFQSEESK--ARACSETEESNTCCSDWQRHFDVALGRM- 1055
Query: 117 KQLEKMRNLIPFDQTTTEDL 136
+ KM L F TED+
Sbjct: 1056 VYVNKMTGLSTF-IAPTEDI 1074
>gi|205277396 dynactin 1 isoform 4 [Homo sapiens]
Length = 1139
Score = 29.3 bits (64), Expect = 1.5
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
Query: 37 ILTSRLAILPENKPSIDWTYYKASVAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKE 96
+LTS A+ P PS + +A V D E+K L+ EDK + + K
Sbjct: 66 VLTSPGAVPPLPSPSKEEEGLRAQVR------DLEEKLETLRLKRAEDKAKLKELEKHKI 119
Query: 97 DVKTCAEWMSLSKARIGQYEKQLEKMR 123
++ EW S + + +++L++ R
Sbjct: 120 QLEQVQEWKSKMQEQQADLQRRLKEAR 146
>gi|205277392 dynactin 1 isoform 3 [Homo sapiens]
Length = 1253
Score = 29.3 bits (64), Expect = 1.5
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
Query: 37 ILTSRLAILPENKPSIDWTYYKASVAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKE 96
+LTS A+ P PS + +A V D E+K L+ EDK + + K
Sbjct: 180 VLTSPGAVPPLPSPSKEEEGLRAQVR------DLEEKLETLRLKRAEDKAKLKELEKHKI 233
Query: 97 DVKTCAEWMSLSKARIGQYEKQLEKMR 123
++ EW S + + +++L++ R
Sbjct: 234 QLEQVQEWKSKMQEQQADLQRRLKEAR 260
>gi|13259508 dynactin 1 isoform 2 [Homo sapiens]
Length = 1144
Score = 29.3 bits (64), Expect = 1.5
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
Query: 37 ILTSRLAILPENKPSIDWTYYKASVAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKE 96
+LTS A+ P PS + +A V D E+K L+ EDK + + K
Sbjct: 66 VLTSPGAVPPLPSPSKEEEGLRAQVR------DLEEKLETLRLKRAEDKAKLKELEKHKI 119
Query: 97 DVKTCAEWMSLSKARIGQYEKQLEKMR 123
++ EW S + + +++L++ R
Sbjct: 120 QLEQVQEWKSKMQEQQADLQRRLKEAR 146
>gi|13259510 dynactin 1 isoform 1 [Homo sapiens]
Length = 1278
Score = 29.3 bits (64), Expect = 1.5
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
Query: 37 ILTSRLAILPENKPSIDWTYYKASVAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKE 96
+LTS A+ P PS + +A V D E+K L+ EDK + + K
Sbjct: 200 VLTSPGAVPPLPSPSKEEEGLRAQVR------DLEEKLETLRLKRAEDKAKLKELEKHKI 253
Query: 97 DVKTCAEWMSLSKARIGQYEKQLEKMR 123
++ EW S + + +++L++ R
Sbjct: 254 QLEQVQEWKSKMQEQQADLQRRLKEAR 280
>gi|186972148 enolase superfamily 1 isoform rTSalpha [Homo sapiens]
Length = 361
Score = 28.9 bits (63), Expect = 2.0
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 54 WTYYKASVAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMS 106
WT +K V A L DD ++ ++ + +K T +DA ++ DV EWMS
Sbjct: 134 WTRFKVKVG-ADLQDDM-RRCQIIRDMIGPEK-TLMMDANQRWDVPEAVEWMS 183
>gi|42544119 enolase superfamily 1 isoform rTS beta [Homo sapiens]
Length = 443
Score = 28.9 bits (63), Expect = 2.0
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 54 WTYYKASVAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMS 106
WT +K V A L DD ++ ++ + +K T +DA ++ DV EWMS
Sbjct: 216 WTRFKVKVG-ADLQDDM-RRCQIIRDMIGPEK-TLMMDANQRWDVPEAVEWMS 265
>gi|42544117 rTS beta protein isoform rTS gamma [Homo sapiens]
Length = 450
Score = 28.9 bits (63), Expect = 2.0
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 54 WTYYKASVAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMS 106
WT +K V A L DD ++ ++ + +K T +DA ++ DV EWMS
Sbjct: 237 WTRFKVKVG-ADLQDDM-RRCQIIRDMIGPEK-TLMMDANQRWDVPEAVEWMS 286
>gi|120587023 down-regulated in metastasis [Homo sapiens]
Length = 2785
Score = 27.7 bits (60), Expect = 4.4
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 57 YKASVAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKE 96
+K + G +++ E A++ P PE +VD EEKE
Sbjct: 1688 HKTLEEQMGKIENEENAIEAIELPEPEAMELERVDEEEKE 1727
>gi|89036565 PREDICTED: similar to Temporarily Assigned Gene name
family member (tag-184) [Homo sapiens]
Length = 2785
Score = 27.7 bits (60), Expect = 4.4
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 57 YKASVAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKE 96
+K + G +++ E A++ P PE +VD EEKE
Sbjct: 1688 HKTLEEQMGKIENEENAIEAIELPEPEAMELERVDEEEKE 1727
>gi|217035121 HMG-BOX transcription factor BBX isoform 1 [Homo
sapiens]
Length = 941
Score = 27.7 bits (60), Expect = 4.4
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 61 VAKAGLVDDFEKKFNALK--FPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQ 118
+ A L ++FEKKFN+L PV D+ V ++K+ +E SK +K
Sbjct: 684 LGSAKLDEEFEKKFNSLPQYSPVTFDRKCVPVPRKKKKTGNVSSEPTKTSKGPFQSQKKN 743
Query: 119 L 119
L
Sbjct: 744 L 744
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 27.3 bits (59), Expect = 5.7
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 10/121 (8%)
Query: 5 KLALKIIDWVTSWESISRNQKAI--ANSLTSWNEILTSRLAILPENKPSIDWTYYKASVA 62
KLA K W+ S E +++N+ + +L + L L + K ++ + + + +
Sbjct: 1811 KLAQKRERWINSMEELTKNKMILYQKKNLAQEKKNLAQEKEKLAQRKENLLYNKERLTHS 1870
Query: 63 KAGLVDDFEK--KFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQLE 120
K LV K FN + V E+K T +EKE V E ++ ++ ++ Q E L
Sbjct: 1871 KKQLVQVKNKLGMFNKILAQV-EEKLT-----QEKETVIKKKEKLAETEKKLVQVEDSLA 1924
Query: 121 K 121
K
Sbjct: 1925 K 1925
>gi|150456432 unc-51-like kinase 3 [Homo sapiens]
Length = 472
Score = 27.3 bits (59), Expect = 5.7
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 12/51 (23%)
Query: 76 ALKFPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQLEKMRNLI 126
AL F VP Y +VDA+ KE +K A++GQY + E+++ ++
Sbjct: 310 ALDFFVPALHY--EVDAQRKEAIK----------AKVGQYVSRAEELKAIV 348
>gi|114431236 zinc finger protein 462 [Homo sapiens]
Length = 2506
Score = 27.3 bits (59), Expect = 5.7
Identities = 12/54 (22%), Positives = 28/54 (51%)
Query: 83 EDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQLEKMRNLIPFDQTTTEDL 136
E K+T ++D+ +++ K + + + + Q E+ EKM + D+ E++
Sbjct: 2336 ETKHTEELDSHLRDEHKVSRNFELVGRVNLDQLEQMKEKMESSSSDDEDKEEEM 2389
>gi|125988395 jumonji domain containing 6 isoform 1 [Homo sapiens]
Length = 414
Score = 27.3 bits (59), Expect = 5.7
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Query: 33 SWNEILTSRLAILPENKPSIDWT---YYKA-SVAKAGLVDDFEKKFNALKFPVPE 83
S I ++ + PE K S+DWT YY++ S++ A + D+ E+ +AL+ V E
Sbjct: 5 SKKRIREAKRSARPELKDSLDWTRHNYYESFSLSPAAVADNVERA-DALQLSVEE 58
>gi|125988389 jumonji domain containing 6 isoform 2 [Homo sapiens]
Length = 403
Score = 27.3 bits (59), Expect = 5.7
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Query: 33 SWNEILTSRLAILPENKPSIDWT---YYKA-SVAKAGLVDDFEKKFNALKFPVPE 83
S I ++ + PE K S+DWT YY++ S++ A + D+ E+ +AL+ V E
Sbjct: 5 SKKRIREAKRSARPELKDSLDWTRHNYYESFSLSPAAVADNVERA-DALQLSVEE 58
>gi|154937330 sodium-dependent glucose transporter 1 [Homo sapiens]
Length = 518
Score = 27.3 bits (59), Expect = 5.7
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 79 FPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQLE----KMRNLIPFDQTTTE 134
FPV T+ +D + KED K+ + LS + + +YE++ E + N + F+ T
Sbjct: 401 FPVLYKLATSPLDRQRKEDRKSEDQKALLSSSGLNEYEEENEEEDAEKWNEMDFEMIETN 460
Query: 135 D 135
D
Sbjct: 461 D 461
>gi|51944950 phosducin-like 2 [Homo sapiens]
Length = 241
Score = 27.3 bits (59), Expect = 5.7
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
Query: 29 NSLTSWNEILTSRLAILP---ENKPSIDWTYYKASVAKAGLVDDFEKKFNALKFPVPEDK 85
N T WN+IL ILP E+K I+ + + K +V FE K + ED+
Sbjct: 5 NEDTEWNDILRD-FGILPPKEESKDEIEEMVLR--LQKEAMVKPFE-KMTLAQLKEAEDE 60
Query: 86 YTAQ-VDAEEKEDVKTCAEWMSLSK 109
+ + + A E K EW +L K
Sbjct: 61 FDEEDMQAVETYRKKRLQEWKALKK 85
>gi|229577185 epidermal growth factor receptor pathway substrate 15
isoform B [Homo sapiens]
Length = 582
Score = 26.9 bits (58), Expect = 7.5
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 15/80 (18%)
Query: 72 KKFNALKFPVPE-----DKYTAQVDAEEKEDVKTCAEWMSL----------SKARIGQYE 116
+K A K V E D+ AQ++ + KE K CAE L +++I YE
Sbjct: 71 QKLQAQKQQVQELLDELDEQKAQLEEQLKEVRKKCAEEAQLISSLKAELTSQESQISTYE 130
Query: 117 KQLEKMRNLIPFDQTTTEDL 136
++L K R + Q T +L
Sbjct: 131 EELAKAREELSRLQQETAEL 150
>gi|4503593 epidermal growth factor receptor pathway substrate 15
isoform A [Homo sapiens]
Length = 896
Score = 26.9 bits (58), Expect = 7.5
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 15/80 (18%)
Query: 72 KKFNALKFPVPE-----DKYTAQVDAEEKEDVKTCAEWMSL----------SKARIGQYE 116
+K A K V E D+ AQ++ + KE K CAE L +++I YE
Sbjct: 385 QKLQAQKQQVQELLDELDEQKAQLEEQLKEVRKKCAEEAQLISSLKAELTSQESQISTYE 444
Query: 117 KQLEKMRNLIPFDQTTTEDL 136
++L K R + Q T +L
Sbjct: 445 EELAKAREELSRLQQETAEL 464
>gi|197927452 dynein, axonemal, heavy chain 1 [Homo sapiens]
Length = 4265
Score = 26.9 bits (58), Expect = 7.5
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 83 EDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQLE 120
ED+ QV AEE+ D++ + +S A++ Q K +E
Sbjct: 3354 EDQLLGQVVAEERPDLEEAKNQLIISNAKMRQELKDIE 3391
>gi|4885583 Rho-associated, coiled-coil containing protein kinase 1
[Homo sapiens]
Length = 1354
Score = 26.6 bits (57), Expect = 9.8
Identities = 11/40 (27%), Positives = 24/40 (60%)
Query: 93 EEKEDVKTCAEWMSLSKARIGQYEKQLEKMRNLIPFDQTT 132
++ ED+K ++ L+ ++ Q +KQLE+ +L+ + T
Sbjct: 521 DQLEDLKKVSQNSQLANEKLSQLQKQLEEANDLLRTESDT 560
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.127 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,513,351
Number of Sequences: 37866
Number of extensions: 203178
Number of successful extensions: 449
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 432
Number of HSP's gapped (non-prelim): 35
length of query: 160
length of database: 18,247,518
effective HSP length: 94
effective length of query: 66
effective length of database: 14,688,114
effective search space: 969415524
effective search space used: 969415524
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.