| Name: LOC100134189 | Sequence: fasta or formatted (130aa) | NCBI GI: 169178511 | |
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Description: PREDICTED: similar to cofactor required for Sp1 transcriptional activation, subunit 8, 34kDa isoform 1
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Referenced in: RNA Polymerase and General Transcription Factors
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Other entries for this name:
alt prot [160aa] PREDICTED: similar to cofactor required for Sp1 transcriptional a... | |||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 6.2 8 1 C cysteine 0.8 1 1 D aspartate 5.4 7 1 E glutamate 6.2 8 1 F phenylalanine 3.8 5 1 G glycine 3.1 4 1 H histidine 3.8 5 1 I isoleucine 4.6 6 1 K lysine 6.9 9 2 L leucine 13.1 17 2 M methionine 1.5 2 1 N asparagine 7.7 10 1 P proline 3.8 5 1 Q glutamine 5.4 7 1 R arginine 5.4 7 1 S serine 10.8 14 2 T threonine 1.5 2 1 V valine 6.9 9 1 W tryptophan 1.5 2 1 Y tyrosine 1.5 2 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 PREDICTED: similar to cofactor required for Sp1 tra... LOC100134189 0.873 PREDICTED: similar to cofactor required for Sp1 tra... MED27 0.873 mediator complex subunit 27 CCDC92 0.021 coiled-coil domain containing 92 PACRGL 0.013 PARK2 co-regulated-like isoform 1 MYST4 0.013 MYST histone acetyltransferase (monocytic leukemia)... IKIP 0.013 IKK interacting protein isoform 1 COLEC12 0.013 collectin sub-family member 12 BBS12 0.008 Bardet-Biedl syndrome 12 ZCCHC11 0.008 zinc finger, CCHC domain containing 11 isoform a [Ho... ZCCHC11 0.008 zinc finger, CCHC domain containing 11 isoform b [Ho... ZCCHC11 0.008 zinc finger, CCHC domain containing 11 isoform c [Ho... HTT 0.008 huntingtin NSMAF 0.004 neutral sphingomyelinase (N-SMase) activation associ... NSMAF 0.004 neutral sphingomyelinase (N-SMase) activation assoc... CLEC4F 0.004 C-type lectin, superfamily member 13 TBC1D22B 0.004 TBC1 domain family, member 22B SMC1B 0.004 SMC1 structural maintenance of chromosomes 1-like 2 ...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
