LOC100134189 8099

Name: LOC100134189	Sequence: fasta or formatted (160aa)		NCBI GI: 169178509
Description: PREDICTED: similar to cofactor required for Sp1 transcriptional activation, subunit 8, 34kDa isoform 2		Referenced in: RNA Polymerase and General Transcription Factors
Other entries for this name: alt prot [130aa] PREDICTED: similar to cofactor required for Sp1 transcriptional a...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.1 13 1 C cysteine 0.6 1 1 D aspartate 4.4 7 1 E glutamate 4.4 7 1 F phenylalanine 2.5 4 1 G glycine 4.4 7 1 H histidine 3.1 5 1 I isoleucine 2.5 4 1 K lysine 6.2 10 1 L leucine 14.4 23 2 M methionine 1.9 3 1 N asparagine 7.5 12 1 P proline 5.0 8 2 Q glutamine 7.5 12 2 R arginine 5.6 9 2 S serine 10.6 17 2 T threonine 2.5 4 2 V valine 6.2 10 1 W tryptophan 0.6 1 1 Y tyrosine 1.9 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to cofactor required for Sp1 tra... MED27 1.000 mediator complex subunit 27 LOC100134189 0.708 PREDICTED: similar to cofactor required for Sp1 tra... SHOX2 0.017 short stature homeobox 2 isoform a PACRGL 0.010 PARK2 co-regulated-like isoform 1 MYST4 0.010 MYST histone acetyltransferase (monocytic leukemia)... CCDC92 0.010 coiled-coil domain containing 92 COLEC12 0.010 collectin sub-family member 12 MED12 0.010 mediator complex subunit 12 IKIP 0.010 IKK interacting protein isoform 1 ZCCHC11 0.007 zinc finger, CCHC domain containing 11 isoform a [Ho... ZCCHC11 0.007 zinc finger, CCHC domain containing 11 isoform b [Ho... ZCCHC11 0.007 zinc finger, CCHC domain containing 11 isoform c [Ho... SYNE1 0.007 spectrin repeat containing, nuclear envelope 1 isofo... SYNE1 0.007 spectrin repeat containing, nuclear envelope 1 isof... CLEC4F 0.007 C-type lectin, superfamily member 13 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.