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Search of human proteins with 169177385
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169177385 PREDICTED: hypothetical protein [Homo sapiens]
(223 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169177385 PREDICTED: hypothetical protein [Homo sapiens] 468 e-132
gi|169177307 PREDICTED: hypothetical protein [Homo sapiens] 460 e-130
gi|239757960 PREDICTED: hypothetical protein [Homo sapiens] 207 8e-54
gi|239753324 PREDICTED: hypothetical protein [Homo sapiens] 150 8e-37
gi|169218002 PREDICTED: hypothetical protein [Homo sapiens] 150 8e-37
gi|169163057 PREDICTED: hypothetical protein [Homo sapiens] 150 8e-37
gi|27436957 membrane associated guanylate kinase, WW and PDZ dom... 40 0.002
gi|113411427 PREDICTED: hypothetical protein [Homo sapiens] 39 0.003
gi|239753271 PREDICTED: similar to ankyrin repeat domain 36 [Hom... 39 0.004
gi|239751752 PREDICTED: hypothetical protein [Homo sapiens] 38 0.006
gi|239746252 PREDICTED: hypothetical protein XP_002343716 [Homo ... 38 0.006
gi|163965366 nascent polypeptide-associated complex alpha subuni... 37 0.010
gi|239747812 PREDICTED: ankyrin repeat domain 36 [Homo sapiens] 37 0.014
gi|169170823 PREDICTED: hypothetical protein [Homo sapiens] 37 0.014
gi|4885075 atonal homolog 1 [Homo sapiens] 36 0.030
gi|4557489 cone-rod homeobox protein [Homo sapiens] 36 0.030
gi|169171345 PREDICTED: hypothetical protein [Homo sapiens] 35 0.039
gi|169172205 PREDICTED: hypothetical protein [Homo sapiens] 35 0.039
gi|169170949 PREDICTED: hypothetical protein [Homo sapiens] 35 0.039
gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo ... 35 0.051
gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo ... 35 0.051
gi|169171580 PREDICTED: hypothetical protein [Homo sapiens] 35 0.067
gi|113419324 PREDICTED: hypothetical protein [Homo sapiens] 35 0.067
gi|113418864 PREDICTED: hypothetical protein [Homo sapiens] 35 0.067
gi|239509076 PREDICTED: hypothetical protein [Homo sapiens] 35 0.067
gi|7657307 LIM domains containing 1 [Homo sapiens] 35 0.067
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 35 0.067
gi|239757729 PREDICTED: hypothetical protein [Homo sapiens] 34 0.088
gi|169204930 PREDICTED: hypothetical protein [Homo sapiens] 34 0.088
gi|169172081 PREDICTED: hypothetical protein [Homo sapiens] 34 0.088
>gi|169177385 PREDICTED: hypothetical protein [Homo sapiens]
Length = 223
Score = 468 bits (1203), Expect = e-132
Identities = 223/223 (100%), Positives = 223/223 (100%)
Query: 1 MHLQPAWAPKLQPPSVCRQQPPGNSRVRPHFPHLGTRARCPCGCGQARRSALQQLHGGGN 60
MHLQPAWAPKLQPPSVCRQQPPGNSRVRPHFPHLGTRARCPCGCGQARRSALQQLHGGGN
Sbjct: 1 MHLQPAWAPKLQPPSVCRQQPPGNSRVRPHFPHLGTRARCPCGCGQARRSALQQLHGGGN 60
Query: 61 RPSALSPVAAEGPWLEVSSSGIGGAGRGQGLAGSQARSTCDPEAAQAMLTTWAPSYRRQA 120
RPSALSPVAAEGPWLEVSSSGIGGAGRGQGLAGSQARSTCDPEAAQAMLTTWAPSYRRQA
Sbjct: 61 RPSALSPVAAEGPWLEVSSSGIGGAGRGQGLAGSQARSTCDPEAAQAMLTTWAPSYRRQA 120
Query: 121 TPKLAGAPSLADPGLDVAVAAAKPGGLLGGGCTGAGTDPQPHPRWLRTAPGAAPTSLRRR 180
TPKLAGAPSLADPGLDVAVAAAKPGGLLGGGCTGAGTDPQPHPRWLRTAPGAAPTSLRRR
Sbjct: 121 TPKLAGAPSLADPGLDVAVAAAKPGGLLGGGCTGAGTDPQPHPRWLRTAPGAAPTSLRRR 180
Query: 181 RGVGVTARQALRREGMRACDSGTYRASPGEPGSQQLLFLCVFL 223
RGVGVTARQALRREGMRACDSGTYRASPGEPGSQQLLFLCVFL
Sbjct: 181 RGVGVTARQALRREGMRACDSGTYRASPGEPGSQQLLFLCVFL 223
>gi|169177307 PREDICTED: hypothetical protein [Homo sapiens]
Length = 223
Score = 460 bits (1183), Expect = e-130
Identities = 218/223 (97%), Positives = 219/223 (98%)
Query: 1 MHLQPAWAPKLQPPSVCRQQPPGNSRVRPHFPHLGTRARCPCGCGQARRSALQQLHGGGN 60
MHLQPAWAPKLQPPSVCRQQPPGNSRVRPHFPHLGTRARCPCGCGQARRSALQQLHGGGN
Sbjct: 1 MHLQPAWAPKLQPPSVCRQQPPGNSRVRPHFPHLGTRARCPCGCGQARRSALQQLHGGGN 60
Query: 61 RPSALSPVAAEGPWLEVSSSGIGGAGRGQGLAGSQARSTCDPEAAQAMLTTWAPSYRRQA 120
RPSALSPVAAEGPWLEVSSSGIGGAGRGQGL GSQAR TCDPEAAQAMLTTWAPSYRRQA
Sbjct: 61 RPSALSPVAAEGPWLEVSSSGIGGAGRGQGLGGSQARGTCDPEAAQAMLTTWAPSYRRQA 120
Query: 121 TPKLAGAPSLADPGLDVAVAAAKPGGLLGGGCTGAGTDPQPHPRWLRTAPGAAPTSLRRR 180
TPKLAGAPSLADPG+DVAVAAAKPGGLLGGGCTGAGTDPQPHPRWLRTAPGAAPTSLRRR
Sbjct: 121 TPKLAGAPSLADPGMDVAVAAAKPGGLLGGGCTGAGTDPQPHPRWLRTAPGAAPTSLRRR 180
Query: 181 RGVGVTARQALRREGMRACDSGTYRASPGEPGSQQLLFLCVFL 223
RG GVTARQALRREGMRACDSGTYRASPGEPGSQQLLFLCV L
Sbjct: 181 RGAGVTARQALRREGMRACDSGTYRASPGEPGSQQLLFLCVIL 223
>gi|239757960 PREDICTED: hypothetical protein [Homo sapiens]
Length = 292
Score = 207 bits (526), Expect = 8e-54
Identities = 98/109 (89%), Positives = 99/109 (90%)
Query: 1 MHLQPAWAPKLQPPSVCRQQPPGNSRVRPHFPHLGTRARCPCGCGQARRSALQQLHGGGN 60
MHLQPAWAPKLQPPSVCRQQPPGNSR RPH PHLGTRARCPCGCG+ARRSALQQLHGGGN
Sbjct: 153 MHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGTRARCPCGCGEARRSALQQLHGGGN 212
Query: 61 RPSALSPVAAEGPWLEVSSSGIGGAGRGQGLAGSQARSTCDPEAAQAML 109
RPSA S VA E PWLEVSSSG GG GRGQGLAGSQAR T DPEAAQAML
Sbjct: 213 RPSAPSRVAVEDPWLEVSSSGRGGPGRGQGLAGSQARGTRDPEAAQAML 261
Score = 55.5 bits (132), Expect = 4e-08
Identities = 36/67 (53%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 120 ATPKLAGAPSLADPGLDVAVAAAKPGGLL-GGGCTGAGTDPQPHPRW---LRTAPGAAPT 175
ATP+ A APS+A+PG + VAAAKPG L GGGCTGA T+ P R AAP
Sbjct: 65 ATPEPARAPSIAEPGPGIPVAAAKPGVLPGGGGCTGARTENPPLSPTRGDCRVPVPAAPI 124
Query: 176 SLRRRRG 182
SLR R G
Sbjct: 125 SLRWRSG 131
>gi|239753324 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 150 bits (379), Expect = 8e-37
Identities = 67/73 (91%), Positives = 68/73 (93%)
Query: 1 MHLQPAWAPKLQPPSVCRQQPPGNSRVRPHFPHLGTRARCPCGCGQARRSALQQLHGGGN 60
MHLQPAWAPKLQPPSVCRQQPPGNSR RPH PHLGTRARCPCGCG+ARRSALQQLHGGGN
Sbjct: 173 MHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGTRARCPCGCGEARRSALQQLHGGGN 232
Query: 61 RPSALSPVAAEGP 73
RPSA SPVA E P
Sbjct: 233 RPSAPSPVAVEDP 245
Score = 47.0 bits (110), Expect = 1e-05
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 11/101 (10%)
Query: 120 ATPKLAGAPSLADPGLDVAVAAAKPGGLL-GGGCTGAGTDPQPHPRWLRTAPGAAPTSLR 178
ATP+ A +PS+A+PG + VAA KP L GGGCTGA T+ P +PT
Sbjct: 85 ATPEPARSPSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPP----------LSPTRGD 134
Query: 179 RRRGVGVTARQALRREGMRACDSGTYRASPGEPGSQQLLFL 219
R V R G A G G+P + Q + L
Sbjct: 135 CRVPVPAAQISLRWRSGREARPGGPQAGRAGDPKADQAMHL 175
>gi|169218002 PREDICTED: hypothetical protein [Homo sapiens]
Length = 218
Score = 150 bits (379), Expect = 8e-37
Identities = 67/73 (91%), Positives = 68/73 (93%)
Query: 1 MHLQPAWAPKLQPPSVCRQQPPGNSRVRPHFPHLGTRARCPCGCGQARRSALQQLHGGGN 60
MHLQPAWAPKLQPPSVCRQQPPGNSR RPH PHLGTRARCPCGCG+ARRSALQQLHGGGN
Sbjct: 146 MHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGTRARCPCGCGEARRSALQQLHGGGN 205
Query: 61 RPSALSPVAAEGP 73
RPSA SPVA E P
Sbjct: 206 RPSAPSPVAVEDP 218
Score = 48.9 bits (115), Expect = 3e-06
Identities = 50/158 (31%), Positives = 63/158 (39%), Gaps = 34/158 (21%)
Query: 83 GGAGRGQGLAGSQARSTCDPEAAQAMLTTWA------------PSYRRQ--------ATP 122
GGAG G+ A AR P ++ T + PS R ATP
Sbjct: 4 GGAGAGRSPA---ARQVAPPGGPSSLARTHSRRHPDHAPPPGRPSCSRPLCAGSSCLATP 60
Query: 123 KLAGAPSLADPGLDVAVAAAKPGGLL-GGGCTGAGTDPQPHPRWLRTAPGAAPTSLRRRR 181
+ A APS+A+PG + VAA KP L GGGCTGA T+ P +PT R
Sbjct: 61 EPARAPSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPP----------LSPTRGDCRV 110
Query: 182 GVGVTARQALRREGMRACDSGTYRASPGEPGSQQLLFL 219
V R G A G G+P + Q + L
Sbjct: 111 PVPAAQISLRWRSGREARPGGPQAGRAGDPKADQAMHL 148
>gi|169163057 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 150 bits (379), Expect = 8e-37
Identities = 67/73 (91%), Positives = 68/73 (93%)
Query: 1 MHLQPAWAPKLQPPSVCRQQPPGNSRVRPHFPHLGTRARCPCGCGQARRSALQQLHGGGN 60
MHLQPAWAPKLQPPSVCRQQPPGNSR RPH PHLGTRARCPCGCG+ARRSALQQLHGGGN
Sbjct: 173 MHLQPAWAPKLQPPSVCRQQPPGNSRARPHSPHLGTRARCPCGCGEARRSALQQLHGGGN 232
Query: 61 RPSALSPVAAEGP 73
RPSA SPVA E P
Sbjct: 233 RPSAPSPVAVEDP 245
Score = 48.1 bits (113), Expect = 6e-06
Identities = 37/101 (36%), Positives = 46/101 (45%), Gaps = 11/101 (10%)
Query: 120 ATPKLAGAPSLADPGLDVAVAAAKPGGLL-GGGCTGAGTDPQPHPRWLRTAPGAAPTSLR 178
ATP+ A APS+A+PG + VAA KP L GGGCTGA T+ P +PT
Sbjct: 85 ATPEPARAPSIAEPGPGIPVAAIKPVILPGGGGCTGARTENPP----------LSPTRGD 134
Query: 179 RRRGVGVTARQALRREGMRACDSGTYRASPGEPGSQQLLFL 219
R V R G A G G+P + Q + L
Sbjct: 135 CRVPVPAAQISLRWRSGREARPGGPQAGRAGDPKADQAMHL 175
>gi|27436957 membrane associated guanylate kinase, WW and PDZ domain
containing 2 [Homo sapiens]
Length = 1455
Score = 39.7 bits (91), Expect = 0.002
Identities = 41/136 (30%), Positives = 55/136 (40%), Gaps = 20/136 (14%)
Query: 44 CGQARRSALQQLHGGGNRPSALSPVAAEGPWLEVSSSGIGGAGRGQGLAGSQARSTCDPE 103
CGQ ++ G R + SP A P LE + G G G+ + ++A +
Sbjct: 1303 CGQKKQRL------GEQRERSASPQRAARPRLEEAPGGQGRPEAGRPASEARAPGLAAAD 1356
Query: 104 AAQAMLTTWAPSYRRQATPKLAGAPSLADPGLDVAVAAAKPGG-----LLGGGCTGAGTD 158
AA A A + ++A AG+ G A A A PGG L G GA
Sbjct: 1357 AADA-----ARAGGKEAPRAAAGSELCRREGPGAAPAFAGPGGGGSGALEAEGRAGARAG 1411
Query: 159 PQPHPRWLRTAPGAAP 174
P+P PR PG AP
Sbjct: 1412 PRPGPR----PPGGAP 1423
>gi|113411427 PREDICTED: hypothetical protein [Homo sapiens]
Length = 268
Score = 39.3 bits (90), Expect = 0.003
Identities = 44/158 (27%), Positives = 61/158 (38%), Gaps = 36/158 (22%)
Query: 14 PSVCRQQPPGNSRVRPHFPHLGTRARCP---CGCGQARRSALQQLHGGGNRPSALSPVAA 70
PS+C+ + SR + RCP G G++ R+ +LH +RP LSP+
Sbjct: 75 PSLCQSEGTRWSRRGRRWAE-----RCPPGVLGAGRSLRAQRSRLH---SRPPPLSPLRK 126
Query: 71 EGPWLEVSSSGIGGAGRGQGLAGSQARSTCDPEAAQAMLTTWAPSYRRQATPKLAGAPSL 130
GG+ + + A + + C QA+ TTW Y P
Sbjct: 127 P-----------GGSNQPRSAAAAGTQEAC----LQALGTTWGWKYH--------ALPLR 163
Query: 131 ADPGLDVAVAAAKPGGL--LGGGCTGAGTDPQPHPRWL 166
DP A +A K G LGGG G G P WL
Sbjct: 164 LDPRSGHAGSALKAGSCPRLGGGGRGRGEAGAPSRFWL 201
>gi|239753271 PREDICTED: similar to ankyrin repeat domain 36 [Homo
sapiens]
Length = 501
Score = 38.9 bits (89), Expect = 0.004
Identities = 43/157 (27%), Positives = 58/157 (36%), Gaps = 22/157 (14%)
Query: 43 GCGQARRSALQQLHGGGNRPSALSPVAAEGPWLEVSSSGIGGAGRGQGLAGSQARSTCDP 102
GCG + A + G P +A L V + A + G G+ RS+ P
Sbjct: 219 GCGPS--GATRPKTGAQPHPGGCGVPSARSCALGVGQEQLARAAQPMGPLGAAGRSSGKP 276
Query: 103 E-----AAQAMLTTWAPSYRRQATPKLAGAPSLADPGLDVAVAAAKPGGLLGGGCTGAGT 157
AA A +TW+ R P A A S ADPG +A A+ G G
Sbjct: 277 RQPTGAAAAAATSTWSRGPRGLGIPDQACASSRADPGASLAAASQAVCGRSAG------- 329
Query: 158 DPQPHPRWLRTAPGAAPTSLRRRRGVGVTARQALRRE 194
LR PG R G + A++A+ RE
Sbjct: 330 ------HGLR--PGVQEARTLRPDGGALRAQEAIPRE 358
>gi|239751752 PREDICTED: hypothetical protein [Homo sapiens]
Length = 211
Score = 38.1 bits (87), Expect = 0.006
Identities = 25/62 (40%), Positives = 29/62 (46%), Gaps = 9/62 (14%)
Query: 160 QPHPRWLRTAPGAAPTSLR-----RRRGVGVTARQALRREGMRACDSGT----YRASPGE 210
+P P WLR A G PT +R R RG T+RQ R+ D GT RA PG
Sbjct: 2 EPPPTWLRLAVGPGPTLVRPGWTGRPRGTARTSRQPDPRQAAGGSDGGTRARRIRAHPGG 61
Query: 211 PG 212
G
Sbjct: 62 EG 63
>gi|239746252 PREDICTED: hypothetical protein XP_002343716 [Homo
sapiens]
Length = 211
Score = 38.1 bits (87), Expect = 0.006
Identities = 25/62 (40%), Positives = 29/62 (46%), Gaps = 9/62 (14%)
Query: 160 QPHPRWLRTAPGAAPTSLR-----RRRGVGVTARQALRREGMRACDSGT----YRASPGE 210
+P P WLR A G PT +R R RG T+RQ R+ D GT RA PG
Sbjct: 2 EPPPTWLRLAVGPGPTLVRPGWTGRPRGTARTSRQPDPRQAAGGSDGGTRARRIRAHPGG 61
Query: 211 PG 212
G
Sbjct: 62 EG 63
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 37.4 bits (85), Expect = 0.010
Identities = 32/119 (26%), Positives = 47/119 (39%), Gaps = 9/119 (7%)
Query: 58 GGNRPSALSPVAAEGPWLEVSSSGIGGAGRGQGLAGSQARSTCDPEAAQAMLTTWAPSYR 117
G PSA++P++ +G L + + +T P+ A A+ T + +
Sbjct: 863 GAPTPSAVTPLSPKGVTLPPKETPTPSVVNLP--FPKEGPATPAPKQAPALSMTSSSPKK 920
Query: 118 RQATPKLAGAPSLADPGLDVAVAAAKPGGLLGGGCTGAGTDPQPHPRWLRTAPGAAPTS 176
+ATP G P+ P AA P GG T P P+W T P A P S
Sbjct: 921 ARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPAT-------PSPKWAPTPPAATPPS 972
Score = 30.0 bits (66), Expect = 1.7
Identities = 32/126 (25%), Positives = 45/126 (35%), Gaps = 17/126 (13%)
Query: 66 SPVAAEGPWLEVSSS------------GIGGAGRGQGLAGSQARSTCDPEAAQAMLTT-W 112
+P + P L ++SS GI + +G A + P+ A + W
Sbjct: 902 TPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKW 961
Query: 113 APSYRRQATPKLAGAPSLADPGLDVAVAAAKPGGLLGGGCT----GAGTDPQPHPRWLRT 168
AP+ P G P+ P AA P GG T GA T P P +
Sbjct: 962 APTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKG 1021
Query: 169 APGAAP 174
+P A P
Sbjct: 1022 SPAATP 1027
>gi|239747812 PREDICTED: ankyrin repeat domain 36 [Homo sapiens]
Length = 753
Score = 37.0 bits (84), Expect = 0.014
Identities = 46/189 (24%), Positives = 65/189 (34%), Gaps = 35/189 (18%)
Query: 11 LQPPSVCRQQPPGNSRVRPHFPHLGTRARCPCGCGQARRSALQQLHGGGNRPSALSPVAA 70
+ PP C Q G+ V+ GCG + A + G P +
Sbjct: 10 IAPPHTCPSQDSGDRVVKS-------------GCGPS--GATRPKTGAQPHPRGCRVPSV 54
Query: 71 EGPWLEVSSSGIGGAGRGQGLAGSQARSTCDPE-----AAQAMLTTWAPSYRRQATPKLA 125
L + A + G G+ RS+ P AA A +TW+ R P A
Sbjct: 55 RSCALGAGQEQLARAAQPVGPLGAAGRSSGKPRQPTGAAAAAATSTWSRGPRGLGIPDQA 114
Query: 126 GAPSLADPGLDVAVAAAKPGGLLGGGCTGAGTDPQPHPRWLRTAPGAAPTSLRRRRGVGV 185
A S ADPG +A A+ + G G G PG R G +
Sbjct: 115 CASSRADPGASLAAASQ----AVCGRSAGHG-----------LPPGVQEARTLRPDGGAL 159
Query: 186 TARQALRRE 194
A++A+ RE
Sbjct: 160 RAQEAIPRE 168
>gi|169170823 PREDICTED: hypothetical protein [Homo sapiens]
Length = 205
Score = 37.0 bits (84), Expect = 0.014
Identities = 35/100 (35%), Positives = 41/100 (41%), Gaps = 13/100 (13%)
Query: 39 RCPCGCGQARRSALQQL-HGGGNRP---SALSPVAAEGPWLEVSSSG---------IGGA 85
RCP G SAL + H GG P SALSP E P ++S+ I
Sbjct: 99 RCPPDGGATPVSALSAVPHDGGAAPVSLSALSPTTEEPPQSQLSALSPTTEELPQHIQRH 158
Query: 86 GRGQGLAGSQARSTCDPEAAQAMLTTWAPSYRRQATPKLA 125
GRG L GS RS DP +L R Q P L+
Sbjct: 159 GRGTILGGSGHRSYLDPAGETQLLLREQLLRRMQPNPPLS 198
>gi|4885075 atonal homolog 1 [Homo sapiens]
Length = 354
Score = 35.8 bits (81), Expect = 0.030
Identities = 20/53 (37%), Positives = 24/53 (45%)
Query: 11 LQPPSVCRQQPPGNSRVRPHFPHLGTRARCPCGCGQARRSALQQLHGGGNRPS 63
LQ PS Q PP + + HL T A G G A + QQ GG RP+
Sbjct: 215 LQTPSGGEQPPPPPASCKSDHHHLRTAASYEGGAGNATAAGAQQASGGSQRPT 267
>gi|4557489 cone-rod homeobox protein [Homo sapiens]
Length = 299
Score = 35.8 bits (81), Expect = 0.030
Identities = 50/166 (30%), Positives = 67/166 (40%), Gaps = 22/166 (13%)
Query: 18 RQQPPGN-SRVRPHFPHLGTRAR-----CPCGCGQARRSALQQLHGGGNRPSALSPVAAE 71
+QQPPG ++ RP GT R CP G + S L G P+ + VA
Sbjct: 104 QQQPPGGQAKARPAKRKAGTSPRPSTDVCPDPLGISD-SYSPPLPGPSGSPT--TAVATV 160
Query: 72 GPWLEVSSSGIGGAGRGQGLAGSQARSTCDPEAAQAMLTTWAPSYRRQATPKLAGAPSLA 131
W S S + A R GL S T P A T+AP+ ++P G+PS
Sbjct: 161 SIWSPASESPLPEAQRA-GLVASGPSLTSAPYAM-----TYAPASAFCSSPSAYGSPSSY 214
Query: 132 DPGLDVAVAAAKPGGLLGGGCTGAGTDPQPHPRWLRTAPGAAPTSL 177
GLD ++ P LGG + P P + +PTSL
Sbjct: 215 FSGLDPYLSPMVP--QLGGPALSPLSGPSVGP-----SLAQSPTSL 253
>gi|169171345 PREDICTED: hypothetical protein [Homo sapiens]
Length = 249
Score = 35.4 bits (80), Expect = 0.039
Identities = 47/165 (28%), Positives = 60/165 (36%), Gaps = 21/165 (12%)
Query: 6 AWAPKLQPPSVCRQQPPGNSRVRPHFPHLGTRARCPCGCGQARRSALQQLHGGGNRPSAL 65
AW+P P QPPG L TRA P G +A ++ H +P
Sbjct: 22 AWSPAPAPARPPLNQPPGGKA-------LSTRALQPGGALEAGTRGGREGHRRLRQPP-- 72
Query: 66 SPVAAEGPWLEVS--------SSGIGGAGRGQGLAGSQARSTCDPEAAQAMLTTWAPSYR 117
+P A G L SS G+GLAG + + L W R
Sbjct: 73 TPSAPPGSPLHEGFLLIALFPSSQNRHRSAGRGLAGRLQQVRPGAAGPRGRLP-WVTGPR 131
Query: 118 RQATPKLAGAPSLAD-PGLDVAVAAAKPGGLLGGGCTGAGTDPQP 161
+ A +P A+ PG D A A+ G GGC A PQP
Sbjct: 132 PAGSLPAAQSPPPAERPGRDAA--GARVCGTQRGGCARAAEAPQP 174
>gi|169172205 PREDICTED: hypothetical protein [Homo sapiens]
Length = 249
Score = 35.4 bits (80), Expect = 0.039
Identities = 47/165 (28%), Positives = 60/165 (36%), Gaps = 21/165 (12%)
Query: 6 AWAPKLQPPSVCRQQPPGNSRVRPHFPHLGTRARCPCGCGQARRSALQQLHGGGNRPSAL 65
AW+P P QPPG L TRA P G +A ++ H +P
Sbjct: 22 AWSPAPAPARPPLNQPPGGKA-------LSTRALQPGGALEAGTRGGREGHRRLRQPP-- 72
Query: 66 SPVAAEGPWLEVS--------SSGIGGAGRGQGLAGSQARSTCDPEAAQAMLTTWAPSYR 117
+P A G L SS G+GLAG + + L W R
Sbjct: 73 TPSAPPGSPLHEGFLLIALFPSSQNRHRSAGRGLAGRLQQVRPGAAGPRGRLP-WVTGPR 131
Query: 118 RQATPKLAGAPSLAD-PGLDVAVAAAKPGGLLGGGCTGAGTDPQP 161
+ A +P A+ PG D A A+ G GGC A PQP
Sbjct: 132 PAGSLPAAQSPPPAERPGRDAA--GARVCGTQRGGCARAAEAPQP 174
>gi|169170949 PREDICTED: hypothetical protein [Homo sapiens]
Length = 249
Score = 35.4 bits (80), Expect = 0.039
Identities = 47/165 (28%), Positives = 60/165 (36%), Gaps = 21/165 (12%)
Query: 6 AWAPKLQPPSVCRQQPPGNSRVRPHFPHLGTRARCPCGCGQARRSALQQLHGGGNRPSAL 65
AW+P P QPPG L TRA P G +A ++ H +P
Sbjct: 22 AWSPAPAPARPPLNQPPGGKA-------LSTRALQPGGALEAGTRGGREGHRRLRQPP-- 72
Query: 66 SPVAAEGPWLEVS--------SSGIGGAGRGQGLAGSQARSTCDPEAAQAMLTTWAPSYR 117
+P A G L SS G+GLAG + + L W R
Sbjct: 73 TPSAPPGSPLHEGFLLIALFPSSQNRHRSAGRGLAGRLQQVRPGAAGPRGRLP-WVTGPR 131
Query: 118 RQATPKLAGAPSLAD-PGLDVAVAAAKPGGLLGGGCTGAGTDPQP 161
+ A +P A+ PG D A A+ G GGC A PQP
Sbjct: 132 PAGSLPAAQSPPPAERPGRDAA--GARVCGTQRGGCARAAEAPQP 174
>gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo
sapiens]
Length = 647
Score = 35.0 bits (79), Expect = 0.051
Identities = 59/219 (26%), Positives = 71/219 (32%), Gaps = 45/219 (20%)
Query: 3 LQPAWAPKLQPPSVCRQQPPGNSRVRPHFPHLGT----RARCPCGCGQARRSALQQLHGG 58
L PAW P L P+ R LGT R CG R A +QL
Sbjct: 165 LGPAW-PALPAPAAGRA--------------LGTDEPLALRGQCGPAARRGCAQEQLRNA 209
Query: 59 GNRPSALSPVAAEGPWLEVSSSGIGGAGRGQGLAGSQARSTCDPEAAQAMLTTWAPSYRR 118
P A SP L G G AG G G + R A + + A R
Sbjct: 210 PWAPRAHSPAGRLALGLIAPRRGAGRAGAGAAACGRRGRIA----APLSGVVQKASYLRP 265
Query: 119 QATPKLAGAPSLADPGLDVAVAAA--------KPGGLLGGGCTG----------AGTDPQ 160
+ P+L PS A A+ + + G G G G GT PQ
Sbjct: 266 KNLPRLLSMPSAAARPCGAALPRSGFSGRPRGRGGAAAGRGSRGEHPACGVGLARGTAPQ 325
Query: 161 PHPRW-LRTAPGAAPTSLRR---RRGVGVTARQALRREG 195
P W L P A T R +RG Q R+G
Sbjct: 326 PASTWALAARPRAGGTWTSRFEAQRGCAHQDGQRRTRDG 364
Score = 28.5 bits (62), Expect = 4.8
Identities = 54/209 (25%), Positives = 72/209 (34%), Gaps = 46/209 (22%)
Query: 35 GTRARCP-CGCGQARRSALQQLHGGGNRPSALSPVAAE----GPWLEVSSSGIG-----G 84
G+R P CG G AR +A Q P++ +AA G W + G G
Sbjct: 306 GSRGEHPACGVGLARGTAPQ--------PASTWALAARPRAGGTWTSRFEAQRGCAHQDG 357
Query: 85 AGRGQGLAGSQARSTCDPEAAQAMLTTWAPSYRRQATPKLAGA--------------PSL 130
R + AG+ A W+P RRQ +L A PS
Sbjct: 358 QRRTRDGAGNHASEPA---------RVWSPPPRRQRPRRLPRASLQEEPKRRPPCARPSG 408
Query: 131 ADPGLDVAVAAAKPGGLLG---GGCTGAGTDPQPHPRWLRTAPGAAPTSLRRRRGVGVTA 187
A P + AA PGG TG DP+P PR R P ++ G G
Sbjct: 409 AGPAREGP--AAWPGGAPTPPHARPTGRRQDPEPGPRAPRGGPASSGWHAGSAAGRGWDP 466
Query: 188 RQALRREGMRACDSGTYRASPGEPGSQQL 216
R A G R++ P ++ L
Sbjct: 467 GGGSRARRRAARGRGCLRSARSSPHARPL 495
>gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo
sapiens]
Length = 647
Score = 35.0 bits (79), Expect = 0.051
Identities = 59/219 (26%), Positives = 71/219 (32%), Gaps = 45/219 (20%)
Query: 3 LQPAWAPKLQPPSVCRQQPPGNSRVRPHFPHLGT----RARCPCGCGQARRSALQQLHGG 58
L PAW P L P+ R LGT R CG R A +QL
Sbjct: 165 LGPAW-PALPAPAAGRA--------------LGTDEPLALRGQCGPAARRGCAQEQLRNA 209
Query: 59 GNRPSALSPVAAEGPWLEVSSSGIGGAGRGQGLAGSQARSTCDPEAAQAMLTTWAPSYRR 118
P A SP L G G AG G G + R A + + A R
Sbjct: 210 PWAPRAHSPAGRLALGLIAPRRGAGRAGAGAAACGRRGRIA----APLSGVVQKASYLRP 265
Query: 119 QATPKLAGAPSLADPGLDVAVAAA--------KPGGLLGGGCTG----------AGTDPQ 160
+ P+L PS A A+ + + G G G G GT PQ
Sbjct: 266 KNLPRLLSMPSAAARPCGAALPRSGFSGRPRGRGGAAAGRGSRGEHPACGVGLARGTAPQ 325
Query: 161 PHPRW-LRTAPGAAPTSLRR---RRGVGVTARQALRREG 195
P W L P A T R +RG Q R+G
Sbjct: 326 PASTWALAARPRAGGTWTSRFEAQRGCAHQDGQRRTRDG 364
Score = 28.5 bits (62), Expect = 4.8
Identities = 54/209 (25%), Positives = 72/209 (34%), Gaps = 46/209 (22%)
Query: 35 GTRARCP-CGCGQARRSALQQLHGGGNRPSALSPVAAE----GPWLEVSSSGIG-----G 84
G+R P CG G AR +A Q P++ +AA G W + G G
Sbjct: 306 GSRGEHPACGVGLARGTAPQ--------PASTWALAARPRAGGTWTSRFEAQRGCAHQDG 357
Query: 85 AGRGQGLAGSQARSTCDPEAAQAMLTTWAPSYRRQATPKLAGA--------------PSL 130
R + AG+ A W+P RRQ +L A PS
Sbjct: 358 QRRTRDGAGNHASEPA---------RVWSPPPRRQRPRRLPRASLQEEPKRRPPCARPSG 408
Query: 131 ADPGLDVAVAAAKPGGLLG---GGCTGAGTDPQPHPRWLRTAPGAAPTSLRRRRGVGVTA 187
A P + AA PGG TG DP+P PR R P ++ G G
Sbjct: 409 AGPAREGP--AAWPGGAPTPPHARPTGRRQDPEPGPRAPRGGPASSGWHAGSAAGRGWDP 466
Query: 188 RQALRREGMRACDSGTYRASPGEPGSQQL 216
R A G R++ P ++ L
Sbjct: 467 GGGSRARRRAARGRGCLRSARSSPHARPL 495
>gi|169171580 PREDICTED: hypothetical protein [Homo sapiens]
Length = 197
Score = 34.7 bits (78), Expect = 0.067
Identities = 39/121 (32%), Positives = 51/121 (42%), Gaps = 8/121 (6%)
Query: 86 GRGQGLAGSQARSTCDPEAAQAMLTTWAPSYR-RQATPKLAG--APSLADPGLDVAVAAA 142
G+ GL G + PEA L + R R ATP +P A P AA
Sbjct: 59 GQQAGLRGKRRARRVAPEARPPFLAGYEHQPRPRAATPGFLSFRSPGAAVPSCFPTAAAH 118
Query: 143 KPGGLLGGGCTGA-GTDPQPHPRWLRTAP---GAAPTSLRRRRGVGVTARQALRREGMRA 198
+ G G G + + + P PR P G+ P S RR RG AR+AL RE ++
Sbjct: 119 RDLGEPGRGPSPSQASGPSRSPRVPPAHPELSGSRPRSPRRPRGSIAAAREAL-RELLKP 177
Query: 199 C 199
C
Sbjct: 178 C 178
>gi|113419324 PREDICTED: hypothetical protein [Homo sapiens]
Length = 197
Score = 34.7 bits (78), Expect = 0.067
Identities = 39/121 (32%), Positives = 51/121 (42%), Gaps = 8/121 (6%)
Query: 86 GRGQGLAGSQARSTCDPEAAQAMLTTWAPSYR-RQATPKLAG--APSLADPGLDVAVAAA 142
G+ GL G + PEA L + R R ATP +P A P AA
Sbjct: 59 GQQAGLRGKRRARRVAPEARPPFLAGYEHQPRPRAATPGFLSFRSPGAAVPSCFPTAAAH 118
Query: 143 KPGGLLGGGCTGA-GTDPQPHPRWLRTAP---GAAPTSLRRRRGVGVTARQALRREGMRA 198
+ G G G + + + P PR P G+ P S RR RG AR+AL RE ++
Sbjct: 119 RDLGEPGRGPSPSQASGPSRSPRVPPAHPELSGSRPRSPRRPRGSIAAAREAL-RELLKP 177
Query: 199 C 199
C
Sbjct: 178 C 178
>gi|113418864 PREDICTED: hypothetical protein [Homo sapiens]
Length = 197
Score = 34.7 bits (78), Expect = 0.067
Identities = 39/121 (32%), Positives = 51/121 (42%), Gaps = 8/121 (6%)
Query: 86 GRGQGLAGSQARSTCDPEAAQAMLTTWAPSYR-RQATPKLAG--APSLADPGLDVAVAAA 142
G+ GL G + PEA L + R R ATP +P A P AA
Sbjct: 59 GQQAGLRGKRRARRVAPEARPPFLAGYEHQPRPRAATPGFLSFRSPGAAVPSCFPTAAAH 118
Query: 143 KPGGLLGGGCTGA-GTDPQPHPRWLRTAP---GAAPTSLRRRRGVGVTARQALRREGMRA 198
+ G G G + + + P PR P G+ P S RR RG AR+AL RE ++
Sbjct: 119 RDLGEPGRGPSPSQASGPSRSPRVPPAHPELSGSRPRSPRRPRGSIAAAREAL-RELLKP 177
Query: 199 C 199
C
Sbjct: 178 C 178
>gi|239509076 PREDICTED: hypothetical protein [Homo sapiens]
Length = 197
Score = 34.7 bits (78), Expect = 0.067
Identities = 39/121 (32%), Positives = 51/121 (42%), Gaps = 8/121 (6%)
Query: 86 GRGQGLAGSQARSTCDPEAAQAMLTTWAPSYR-RQATPKLAG--APSLADPGLDVAVAAA 142
G+ GL G + PEA L + R R ATP +P A P AA
Sbjct: 59 GQQAGLRGKRRARRVAPEARPPFLAGYEHQPRPRAATPGFLSFRSPGAAVPSCFPTAAAH 118
Query: 143 KPGGLLGGGCTGA-GTDPQPHPRWLRTAP---GAAPTSLRRRRGVGVTARQALRREGMRA 198
+ G G G + + + P PR P G+ P S RR RG AR+AL RE ++
Sbjct: 119 RDLGEPGRGPSPSQASGPSRSPRVPPAHPELSGSRPRSPRRPRGSIAAAREAL-RELLKP 177
Query: 199 C 199
C
Sbjct: 178 C 178
>gi|7657307 LIM domains containing 1 [Homo sapiens]
Length = 676
Score = 34.7 bits (78), Expect = 0.067
Identities = 33/105 (31%), Positives = 45/105 (42%), Gaps = 17/105 (16%)
Query: 62 PSALSPVAAEGP---WLEVSSSGIGGAGRGQGLAGSQARSTCDPEAAQAMLTTWAPSYRR 118
PS +P+A P L S+SG+GG ++G ++ DP Q SY
Sbjct: 295 PSVSAPLALSCPRQGGLPRSNSGLGGE-----VSGVMSKPNVDP---QPWFQDGPKSYLS 346
Query: 119 QATPKLAGAPSLADPGLDVAVAAAKPGGLLGGGCTGAGTDPQPHP 163
+ APS + GLD + A PG GCT GT P+ P
Sbjct: 347 SS------APSSSPAGLDGSQQGAVPGLGPKPGCTDLGTGPKLSP 385
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 34.7 bits (78), Expect = 0.067
Identities = 57/239 (23%), Positives = 79/239 (33%), Gaps = 56/239 (23%)
Query: 15 SVCRQQPPGNSRVRPHFPHLGTRARCPCGCGQARRSALQQLHGGGNRPSALSPVAAEGPW 74
S C+++ + RPH G R+ G + +L + PS LSP +
Sbjct: 229 SKCKRKEKNKEKKRPHTESPGRRSHRHSS-GSSHSPSLSSHYSDSRSPSRLSPKHRD--- 284
Query: 75 LEVSSSGIGGAGRGQGLAGSQARSTCDPEAAQAMLTTWAPSYRRQATPKLAGA------- 127
GR G S + P W R + + +GA
Sbjct: 285 ----------EGRKTGSQRSSGSRSPSPSGGSG----WGSPQRNGGSGQRSGAHGGRPGS 330
Query: 128 -------PSLADPGL-DVAVAAAKPGGLLGGGCTGAGTDPQPHPRWLRTAPGAAPTS-LR 178
PS P + D A AAA G + P R R A GA R
Sbjct: 331 AHSPPDKPSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRR 390
Query: 179 RRRGVGVTARQALRREGMR-------------------ACDSGTYRASPG---EPGSQQ 215
RRR ++ A RR G R + DSG+ R +PG EPGS++
Sbjct: 391 RRRRRSRSSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGAPGPGPEPGSER 449
>gi|239757729 PREDICTED: hypothetical protein [Homo sapiens]
Length = 329
Score = 34.3 bits (77), Expect = 0.088
Identities = 55/225 (24%), Positives = 77/225 (34%), Gaps = 39/225 (17%)
Query: 5 PAWAPKLQPPSVCRQQPPGNSRVRPHFPHLGTRARCPCGCGQARRSALQQLHGGGNRPSA 64
PA P QP C P G + RPH G R C G R AL L RP A
Sbjct: 91 PAPGPCAQPAGTCPPPPTGEKQPRPH----GFR----CSHGSKRAPAL--LGAPARRPPA 140
Query: 65 LSPVAAEGPWLEVSSSGIGGAGRGQGLAGSQARSTCDPEAAQAMLTTWAPSYRRQATPKL 124
P P L+ + GL G+ ++ P +AP R ++
Sbjct: 141 HIPAQPRWPRLQPVAKR-RARPVPPGLPGAPKQAALTPGRRPLTPAAFAPKASRD--QQV 197
Query: 125 AGAPSLADPGL-----------DVAVAAAKPGGLLGGGCTG--AGTDPQPHPRWLRTAP- 170
+ ++ GL D+ + G GGC A + Q H L +P
Sbjct: 198 TDSTTICQRGLIEETGPARQISDLCEVSQGVGAFRAGGCPSSLASSREQTHSPHLYPSPS 257
Query: 171 GAAPTSLRRRRGVGVTARQALRREGMRA---------CDSGTYRA 206
++P+S VT R R G+ A C TY++
Sbjct: 258 SSSPSSWEAPPANSVTPR---GRPGIPAHKLGASSAVCQEATYKS 299
>gi|169204930 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 34.3 bits (77), Expect = 0.088
Identities = 54/201 (26%), Positives = 69/201 (34%), Gaps = 33/201 (16%)
Query: 1 MHLQPAWAPKLQPPSVCRQQPPGNSRVRPHFPHLGTRARCPCGCGQARRSALQQLHGGGN 60
+ Q + +P +P SV R P R P G P R A+ + GG
Sbjct: 78 LRTQLSGSPPRRPTSVLRLASPAGDLPRRPRPRAGGGRHSP-------RPAVGTIFRGGR 130
Query: 61 RPSALSPVAAEGPWLEVSSSGIGGAG--RGQGLAGSQARSTCDPEAAQAMLTTWAPSYRR 118
+ L + G+G RG GL + RS A +
Sbjct: 131 KGR-----------LREGRGAVRGSGKRRGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGG 179
Query: 119 QATPKLAGAPSLADPGLDVAVAAAKPGGLLGGGCTGAGTDPQPHPRWLRTAPGAAPTSLR 178
Q +L + PGL AA GG GGG G G +P P R P P R
Sbjct: 180 QGAERLG----VHQPGLPTH--AALRGG--GGGSEGGGGGARPSPPRARQPPSGRPRP-R 230
Query: 179 RRRGVGV----TARQALRREG 195
R R +G T R AL R G
Sbjct: 231 RTRLLGSAERHTGRAALARHG 251
>gi|169172081 PREDICTED: hypothetical protein [Homo sapiens]
Length = 205
Score = 34.3 bits (77), Expect = 0.088
Identities = 34/100 (34%), Positives = 40/100 (40%), Gaps = 13/100 (13%)
Query: 39 RCPCGCGQARRSALQQL-HGGGNRP---SALSPVAAEGPWLEVSSSG---------IGGA 85
RCP G SAL + H GG P SALSP E P ++S+ I
Sbjct: 99 RCPPDGGATPVSALSAVPHDGGAAPVSLSALSPTTEEPPQSQLSALSPTTEELPQHIQRH 158
Query: 86 GRGQGLAGSQARSTCDPEAAQAMLTTWAPSYRRQATPKLA 125
GRG GS RS DP +L R Q P L+
Sbjct: 159 GRGTIPGGSGHRSYLDPAGETQLLLREQLLRRMQPNPPLS 198
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,614,504
Number of Sequences: 37866
Number of extensions: 667383
Number of successful extensions: 3537
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 210
Number of HSP's that attempted gapping in prelim test: 3343
Number of HSP's gapped (non-prelim): 404
length of query: 223
length of database: 18,247,518
effective HSP length: 98
effective length of query: 125
effective length of database: 14,536,650
effective search space: 1817081250
effective search space used: 1817081250
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.