Search of human proteins with 11128041

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|11128041 protocadherin gamma subfamily A, 10 isoform 1
precursor [Homo sapiens]
         (936 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precur...  1842   0.0  
gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precur...  1588   0.0  
gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precurs...  1450   0.0  
gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precurs...  1417   0.0  
gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precurs...  1403   0.0  
gi|14270484 protocadherin gamma subfamily A, 8 isoform 1 precurs...  1397   0.0  
gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precurs...  1389   0.0  
gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precurs...  1381   0.0  
gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precur...  1378   0.0  
gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precurs...  1378   0.0  
gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precurs...  1375   0.0  
gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precurs...  1371   0.0  
gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precurs...  1370   0.0  
gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precurs...  1196   0.0  
gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precur...  1164   0.0  
gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precurs...  1151   0.0  
gi|7662056 protocadherin gamma subfamily A, 8 isoform 2 precurso...  1150   0.0  
gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precurs...  1136   0.0  
gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precurs...  1134   0.0  
gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precur...  1131   0.0  
gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precurs...  1128   0.0  
gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precurs...  1127   0.0  
gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precurs...  1123   0.0  
gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precurs...  1121   0.0  
gi|11128037 protocadherin gamma subfamily B, 1 isoform 1 precurs...   921   0.0  
gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precurs...   919   0.0  
gi|11128027 protocadherin gamma subfamily B, 7 isoform 1 precurs...   914   0.0  
gi|11128029 protocadherin gamma subfamily B, 6 isoform 1 precurs...   904   0.0  
gi|11128031 protocadherin gamma subfamily B, 5 isoform 1 precurs...   895   0.0  
gi|11128033 protocadherin gamma subfamily B, 3 isoform 1 precurs...   892   0.0  

>gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precursor
           [Homo sapiens]
          Length = 936

 Score = 1842 bits (4772), Expect = 0.0
 Identities = 936/936 (100%), Positives = 936/936 (100%)

Query: 1   MAAQRNRSKESKDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAP 60
           MAAQRNRSKESKDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAP
Sbjct: 1   MAAQRNRSKESKDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAP 60

Query: 61  RELAERGVRIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKL 120
           RELAERGVRIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKL
Sbjct: 61  RELAERGVRIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKL 120

Query: 121 FGIEIEVTDINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNK 180
           FGIEIEVTDINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNK
Sbjct: 121 FGIEIEVTDINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNK 180

Query: 181 HFSLRVQSRANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDAN 240
           HFSLRVQSRANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDAN
Sbjct: 181 HFSLRVQSRANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDAN 240

Query: 241 DNAPVFTLPEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNK 300
           DNAPVFTLPEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNK
Sbjct: 241 DNAPVFTLPEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNK 300

Query: 301 YTGEIKISENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPV 360
           YTGEIKISENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPV
Sbjct: 301 YTGEIKISENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPV 360

Query: 361 TEDSPLGTVVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVS 420
           TEDSPLGTVVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVS
Sbjct: 361 TEDSPLGTVVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVS 420

Query: 421 SYNITVTATDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTA 480
           SYNITVTATDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTA
Sbjct: 421 SYNITVTATDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTA 480

Query: 481 LDPDSKENAQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASD 540
           LDPDSKENAQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASD
Sbjct: 481 LDPDSKENAQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASD 540

Query: 541 SGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDR 600
           SGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDR
Sbjct: 541 SGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDR 600

Query: 601 DSGQNAWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSA 660
           DSGQNAWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSA
Sbjct: 601 DSGQNAWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSA 660

Query: 661 TVTLTVAVADSIPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRL 720
           TVTLTVAVADSIPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRL
Sbjct: 661 TVTLTVAVADSIPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRL 720

Query: 721 RRWHKSRLLQASGGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYA 780
           RRWHKSRLLQASGGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYA
Sbjct: 721 RRWHKSRLLQASGGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYA 780

Query: 781 DTLISQESCEKNDPLSLLDDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTG 840
           DTLISQESCEKNDPLSLLDDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTG
Sbjct: 781 DTLISQESCEKNDPLSLLDDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTG 840

Query: 841 TWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVY 900
           TWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVY
Sbjct: 841 TWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVY 900

Query: 901 IPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 936
           IPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 901 IPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 936


>gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precursor
           [Homo sapiens]
          Length = 850

 Score = 1588 bits (4112), Expect = 0.0
 Identities = 812/812 (100%), Positives = 812/812 (100%)

Query: 1   MAAQRNRSKESKDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAP 60
           MAAQRNRSKESKDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAP
Sbjct: 1   MAAQRNRSKESKDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAP 60

Query: 61  RELAERGVRIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKL 120
           RELAERGVRIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKL
Sbjct: 61  RELAERGVRIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKL 120

Query: 121 FGIEIEVTDINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNK 180
           FGIEIEVTDINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNK
Sbjct: 121 FGIEIEVTDINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNK 180

Query: 181 HFSLRVQSRANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDAN 240
           HFSLRVQSRANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDAN
Sbjct: 181 HFSLRVQSRANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDAN 240

Query: 241 DNAPVFTLPEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNK 300
           DNAPVFTLPEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNK
Sbjct: 241 DNAPVFTLPEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNK 300

Query: 301 YTGEIKISENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPV 360
           YTGEIKISENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPV
Sbjct: 301 YTGEIKISENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPV 360

Query: 361 TEDSPLGTVVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVS 420
           TEDSPLGTVVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVS
Sbjct: 361 TEDSPLGTVVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVS 420

Query: 421 SYNITVTATDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTA 480
           SYNITVTATDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTA
Sbjct: 421 SYNITVTATDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTA 480

Query: 481 LDPDSKENAQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASD 540
           LDPDSKENAQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASD
Sbjct: 481 LDPDSKENAQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASD 540

Query: 541 SGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDR 600
           SGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDR
Sbjct: 541 SGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDR 600

Query: 601 DSGQNAWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSA 660
           DSGQNAWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSA
Sbjct: 601 DSGQNAWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSA 660

Query: 661 TVTLTVAVADSIPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRL 720
           TVTLTVAVADSIPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRL
Sbjct: 661 TVTLTVAVADSIPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRL 720

Query: 721 RRWHKSRLLQASGGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYA 780
           RRWHKSRLLQASGGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYA
Sbjct: 721 RRWHKSRLLQASGGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYA 780

Query: 781 DTLISQESCEKNDPLSLLDDSKFPIEDTPLVP 812
           DTLISQESCEKNDPLSLLDDSKFPIEDTPLVP
Sbjct: 781 DTLISQESCEKNDPLSLLDDSKFPIEDTPLVP 812


>gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1450 bits (3753), Expect = 0.0
 Identities = 737/920 (80%), Positives = 790/920 (85%)

Query: 17  LVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGRT 76
           LVLLC   G+ WEA A QI YS+PEE EKG  VGNISKDL L PRELAER VRIVSRGRT
Sbjct: 13  LVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGRT 72

Query: 77  QLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAPK 136
           QLFSLNPRSG+L+TAGRIDREELCAQS RC+V+F +LVEDRVKL+GIEIEVTDIND+APK
Sbjct: 73  QLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAPK 132

Query: 137 FQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKYP 196
           FQAE+L+VKINE    G R+PLPEAIDPDVGVNSLQSYQLSPN HFSL VQ+  NG   P
Sbjct: 133 FQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAINP 192

Query: 197 ELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSVP 256
           ELVLE +LDREE   HHLVLTASDGG+P RS TV + VTV D NDNAPVF    YRV V 
Sbjct: 193 ELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVL 252

Query: 257 ENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEET 316
           EN+P GT LLT TA+D DEG NG+V Y F K+ + Q L FQLN+ TGEI  +++LDYEE 
Sbjct: 253 ENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEEC 312

Query: 317 GFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNVH 376
            FYE+EIQAEDGG      KVLI+VEDVNDN PE+TITSLFSPV ED+P GTV+ L N H
Sbjct: 313 SFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAH 372

Query: 377 DLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPPL 436
           D DS +NGQV CSI   L F LE S + YYRL+  + LDRE+ S YNITVTATD G+PPL
Sbjct: 373 DRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPL 432

Query: 437 STEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSLA 496
           STE H  LQV DINDNPP FSQ SY  Y+PENNARG SIFSV A DPDS EN+++IYSLA
Sbjct: 433 STEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLA 492

Query: 497 EDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLFV 556
           EDTIQG PLS+Y+SINSDTGVLYAL SFDYEQF +LQMQVTASDSG PPLSSNVSL LFV
Sbjct: 493 EDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFV 552

Query: 557 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 616
           LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL KAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKAS 612

Query: 617 EPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 676
           EPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVA+ADSIP +L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDIL 672

Query: 677 ADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGL 736
           ADLGS + PA+ E SDLTLYLVVAVA VSCVFL FVI LLA RLR WH S LL+A+  GL
Sbjct: 673 ADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDGL 732

Query: 737 TGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKNDPLS 796
            GV  SHFVGVDGVRAFLQTYS E SLTADSRKSHLIFPQPNYADTLISQ+SCEKN+PL 
Sbjct: 733 AGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLISQQSCEKNEPLC 792

Query: 797 LLDDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 856
           +  DSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI
Sbjct: 793 VSVDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 852

Query: 857 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 916
           LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD
Sbjct: 853 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 912

Query: 917 GKAPAGGNGNKKKSGKKEKK 936
           GKAPAGGNGNKKKSGKKEKK
Sbjct: 913 GKAPAGGNGNKKKSGKKEKK 932


>gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1417 bits (3669), Expect = 0.0
 Identities = 720/925 (77%), Positives = 789/925 (85%)

Query: 12  KDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIV 71
           +D  GLVLL +  G  WE G  QI YS+PEELEKGS VG+IS+DLGL PRELAERGVRI+
Sbjct: 8   RDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRII 67

Query: 72  SRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDIN 131
            RGRTQLF+LNPRSGSL+TAGRIDREELC  + +C ++ +IL+ED+VK++G+E+EV DIN
Sbjct: 68  PRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDIN 127

Query: 132 DNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRAN 191
           DNAP F+   L++KI+EN A  MRFPLP A DPD+G NSLQSY+LSPN HFSL VQ+ A+
Sbjct: 128 DNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGAD 187

Query: 192 GVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEY 251
           G KYPELVL+ +LDREE+A HHLVLTASDGGDP+R+GT  + V V DANDNAP F  PEY
Sbjct: 188 GSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEY 247

Query: 252 RVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENL 311
           R SVPENL +GTQLL V ATD DEG N EV YSFR + D     F+L+  +G I     L
Sbjct: 248 RASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGEL 307

Query: 312 DYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVA 371
           D+EE+GFY++E+QA D   Y A AKVLITV DVNDN+PE+ +TSL S V E+SP GT++A
Sbjct: 308 DHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIA 367

Query: 372 LLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDG 431
           LLNV+D DSE+NGQV C I   LPFKLEKS  +YY LV    LDREQV SYNITVTATD 
Sbjct: 368 LLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDR 427

Query: 432 GSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQI 491
           G+PPLSTE H  L VAD NDNPP F Q SY  YIPENN RG S+ SVTA DPD +ENAQI
Sbjct: 428 GTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQI 487

Query: 492 IYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVS 551
            YSLAE+TIQG  LSSY+SINSDTGVLYAL SFDYEQF +LQ++V A D+G PPLSSNVS
Sbjct: 488 TYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVS 547

Query: 552 LSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR 611
           LSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR
Sbjct: 548 LSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR 607

Query: 612 LLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADS 671
           LLKASEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADS
Sbjct: 608 LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADS 667

Query: 672 IPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQA 731
           IPQVLADLGS ESPANSETSDLTLYLVVAVAAVSCVFLAFVI+LLA RLRRWHKSRLLQA
Sbjct: 668 IPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQA 727

Query: 732 SGGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK 791
           SGGGLTG   SHFVGVDGV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+SQES EK
Sbjct: 728 SGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEK 787

Query: 792 NDPLSLLDDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEM 851
           ++PL L  DS F  +   L+ QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEM
Sbjct: 788 SEPLLLSGDSVFSKDSHGLIEQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEM 847

Query: 852 LQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNA 911
           LQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNA
Sbjct: 848 LQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNA 907

Query: 912 AGKRDGKAPAGGNGNKKKSGKKEKK 936
           AGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 908 AGKRDGKAPAGGNGNKKKSGKKEKK 932


>gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1403 bits (3631), Expect = 0.0
 Identities = 713/924 (77%), Positives = 785/924 (84%)

Query: 13  DCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVS 72
           D  G  LL +  G PWEA A +I YS+ EE +KGSFVG+I+KDLGL PRELAERGVRI+S
Sbjct: 9   DYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIIS 68

Query: 73  RGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDIND 132
           RGRTQLF+LN RSGSL+TAGRIDREE+CAQSARC+V+FNIL+ED++ L+ I++E+ DIND
Sbjct: 69  RGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDIND 128

Query: 133 NAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANG 192
           N P+F  E ++VKI EN A G+RFPL EA DPDVG NSLQSYQLSPN+HFSL VQS  + 
Sbjct: 129 NVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDE 188

Query: 193 VKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYR 252
            KYPELVLE  LDREEE +HHLVLTASDGGDP RS T  + VTV D ND+ PVF+LP+Y+
Sbjct: 189 TKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQ 248

Query: 253 VSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLD 312
           V+VPEN+PVGT+LLTV A D DEG NGEVTYSFRK+       F LN  TGEI   E LD
Sbjct: 249 VTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLD 308

Query: 313 YEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVAL 372
           YEET FYE+E+QA+DG   L  AKVLITV DVNDN+PE+T+TSL S + ED+PLGTV+AL
Sbjct: 309 YEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIAL 368

Query: 373 LNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGG 432
             + D DS +NG+VTC+I   LPFKLEKSID+YYRLV  + LDRE +S YNIT+ ATDGG
Sbjct: 369 FYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGG 428

Query: 433 SPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQII 492
           +PPLS E H  +QVAD NDNPPTF   SY  YI ENN RGASIF VTA D DS++NAQI 
Sbjct: 429 TPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQIT 488

Query: 493 YSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSL 552
           YSLAEDTIQG P+SSY+SINSDTGVLYAL+SFDYEQ  ELQ++VTA DSGDPPLSSN+SL
Sbjct: 489 YSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSL 548

Query: 553 SLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL 612
           SLFVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQNAWLSY L
Sbjct: 549 SLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLL 608

Query: 613 LKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI 672
           LKASEPGLFAVG +TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI
Sbjct: 609 LKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI 668

Query: 673 PQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQAS 732
           P+VLADLGS E        DLTLYLVVAVA VSCVFLAFV+VLLA RLRRWHKSRLLQAS
Sbjct: 669 PEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQAS 728

Query: 733 GGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKN 792
            GGL  V  SHFVG+DGV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D LISQESCEKN
Sbjct: 729 EGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKN 788

Query: 793 DPLSLLDDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEML 852
           D L    D +   E+ P + QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEML
Sbjct: 789 DSLLTSVDFQECKENLPSIQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEML 848

Query: 853 QAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAA 912
           QAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAA
Sbjct: 849 QAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAA 908

Query: 913 GKRDGKAPAGGNGNKKKSGKKEKK 936
           GKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 909 GKRDGKAPAGGNGNKKKSGKKEKK 932


>gi|14270484 protocadherin gamma subfamily A, 8 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1397 bits (3615), Expect = 0.0
 Identities = 721/936 (77%), Positives = 784/936 (83%), Gaps = 4/936 (0%)

Query: 1   MAAQRNRSKESKDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAP 60
           MAA ++R +  +    L+LLC   G  WE G  QI YS+PEE +KGSFVGNISKDLGL P
Sbjct: 1   MAAPQSRPRRGE----LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDP 56

Query: 61  RELAERGVRIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKL 120
           R+LA+ GVRIVSRGRTQLF+LNPRSGSLITAGRIDREELCAQS RC+++ N LVED+ KL
Sbjct: 57  RKLAKHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKL 116

Query: 121 FGIEIEVTDINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNK 180
           FG+EIE+ DINDN PKFQ E+L+VKINE    G R+PLPEA+DPDVGVNSLQSYQLSPN 
Sbjct: 117 FGVEIEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNH 176

Query: 181 HFSLRVQSRANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDAN 240
           HFSL VQ+  NG   PELVLE +LDREEEA HHLVLTASDGG P RS TV + VTV D N
Sbjct: 177 HFSLDVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTN 236

Query: 241 DNAPVFTLPEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNK 300
           DNAPVF  P YRV V EN+P GT+LLTVTA+D DEG NG+V Y FRK+ + Q   FQLN+
Sbjct: 237 DNAPVFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNE 296

Query: 301 YTGEIKISENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPV 360
            TGEI I+++LDYEE  FYE+EIQAED GA L   K+LI+VEDVNDN PE+ ITSLFSPV
Sbjct: 297 NTGEISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPV 356

Query: 361 TEDSPLGTVVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVS 420
            E+S  GTV+A L+VHD DS +NGQV C     LPFKLEKSI +YYRLV  + LDRE VS
Sbjct: 357 LENSLPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVS 416

Query: 421 SYNITVTATDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTA 480
            YNITV A+D G+PPLSTE    L VADINDNPPTF   SY  YI ENN RGASIFS+TA
Sbjct: 417 IYNITVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTA 476

Query: 481 LDPDSKENAQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASD 540
            DPDS+ENAQ+ YS+ EDT+QG PLSSYISINSDTGVLYAL+SFDYEQ  +LQ+ VTASD
Sbjct: 477 HDPDSQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASD 536

Query: 541 SGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDR 600
           SGDPPLSSN+SLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVDR
Sbjct: 537 SGDPPLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDR 596

Query: 601 DSGQNAWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSA 660
           DSGQNAWLSYRLLKASEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSA
Sbjct: 597 DSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSA 656

Query: 661 TVTLTVAVADSIPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRL 720
           TVTLTVAVADSIP+VL +LGS +   +   S LTLYLVVAVAA+SCVFLAFV VLL  RL
Sbjct: 657 TVTLTVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRL 716

Query: 721 RRWHKSRLLQASGGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYA 780
           RRWHKSRLLQ SGG L GV  SHFVGV+ V+AFLQTYS EVSLTADSRKSHLIFPQPNYA
Sbjct: 717 RRWHKSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYA 776

Query: 781 DTLISQESCEKNDPLSLLDDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTG 840
           D LISQE CEKND L    D      +     QAPPNTDWRFSQAQRPGTSGSQNGDDTG
Sbjct: 777 DMLISQEGCEKNDSLLTSVDFHEYKNEADHGQQAPPNTDWRFSQAQRPGTSGSQNGDDTG 836

Query: 841 TWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVY 900
           TWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVY
Sbjct: 837 TWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVY 896

Query: 901 IPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 936
           IPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 897 IPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932


>gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1389 bits (3594), Expect = 0.0
 Identities = 703/921 (76%), Positives = 778/921 (84%)

Query: 16  GLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGR 75
           GL LLC   G   E G+ QI YS+ EEL+KGSFVGNI+ DLGL PRELAERGVRIVSRGR
Sbjct: 12  GLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGR 71

Query: 76  TQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAP 135
           TQLFSLNP+SGSL+TA RIDREELCAQ   C+V  NILVED++K+F +EIE+ DINDNAP
Sbjct: 72  TQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAP 131

Query: 136 KFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKY 195
            F  E L++KI E    G RFP+  A DPDVG+NSLQ+Y+LSPN +FSL V S + G KY
Sbjct: 132 NFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKY 191

Query: 196 PELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSV 255
           PELVLE +LDRE++ IH LVL ASDGGDP+ SG + + V V DANDN P+FT PEYRVSV
Sbjct: 192 PELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSV 251

Query: 256 PENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEE 315
            EN+PVGT+LLTV ATD DEG N +V+Y   K+P      F LN  +GE+ I ++LDYE+
Sbjct: 252 WENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYED 311

Query: 316 TGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNV 375
             FYEI+I+A+DG   L+ AK+L+TV DVNDN+PE+TITSL S V E+  +G  +AL++V
Sbjct: 312 AMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDV 371

Query: 376 HDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPP 435
           HD DS QNGQV   +L  LPFKLEKSID YYRLV   +LDREQ+S YNI++ A+DGGSPP
Sbjct: 372 HDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPP 431

Query: 436 LSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSL 495
           LSTE H  L V DINDNPPTF  +SY  YIPENN RGASIFSVTA DPDS  NA+I Y+L
Sbjct: 432 LSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYAL 491

Query: 496 AEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLF 555
            EDT+QG PLSS++SINS+TGVLYALRSFDYEQF +L++ VTASDSG+PPLSSNVSL+LF
Sbjct: 492 TEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLF 551

Query: 556 VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA 615
           VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA
Sbjct: 552 VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA 611

Query: 616 SEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQV 675
           SEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP +
Sbjct: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDI 671

Query: 676 LADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGG 735
           LADLGS E  A    SDLTLYLVVAVAAVSCVFLAFVIVLLA RLRRWHKSRLLQASGGG
Sbjct: 672 LADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGG 731

Query: 736 LTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKNDPL 795
           L    GSHFVG DGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK++PL
Sbjct: 732 LASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPL 791

Query: 796 SLLDDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAM 855
            +  D      D+ L+ QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAM
Sbjct: 792 LITQDLLEMKGDSNLLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAM 851

Query: 856 ILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKR 915
           ILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKR
Sbjct: 852 ILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKR 911

Query: 916 DGKAPAGGNGNKKKSGKKEKK 936
           DGKAPAGGNGNKKKSGKKEKK
Sbjct: 912 DGKAPAGGNGNKKKSGKKEKK 932


>gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1381 bits (3575), Expect = 0.0
 Identities = 703/927 (75%), Positives = 779/927 (84%), Gaps = 8/927 (0%)

Query: 14  CSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSR 73
           C  LVLLC      WEA A QI YS+ EE+++GSFVGNI+KDLGL P  LAE+GVRIVSR
Sbjct: 10  CRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQGVRIVSR 69

Query: 74  GRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDN 133
           GR+QLF+LNPRSGSL+TA RIDREELCAQSA C+++FNIL+ED++ ++ +E+E+TDINDN
Sbjct: 70  GRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVEITDINDN 129

Query: 134 APKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGV 193
           AP+F  E L++KI+E    G R PL  A D DVG N+LQ Y L+PN HFSL V+  A+G 
Sbjct: 130 APRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVRRGADGN 189

Query: 194 KYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRV 253
           KYPELVLE SLDREEEA+HHLVL ASDGGDP+ SGT  + V V DANDNAPVFT PEYR+
Sbjct: 190 KYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRI 249

Query: 254 SVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDY 313
           S+PEN  VGT++LTVTATD DEG   +V Y   K P      F+L   +GE+ I ++LDY
Sbjct: 250 SIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDY 309

Query: 314 EETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALL 373
           E+  F+EI+I+A+DG   L  AKV++TV DVNDN+PE  +TS  S V+EDS  GT++ L 
Sbjct: 310 EDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPGTIIGLF 369

Query: 374 NVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGS 433
           NVHD DS QN   TCS+   LPFKLEKS+D+YYRLV  RALDREQ S YNIT+TA DGG+
Sbjct: 370 NVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITLTAKDGGN 429

Query: 434 PPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIY 493
           P LST+AH +LQVADINDN P FS+ SY TYIPENN RGAS+FSVTA DPDS +NA + Y
Sbjct: 430 PSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSNDNAHVTY 489

Query: 494 SLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLS 553
           S AEDT+QG PLSSYISINSDTGVLYALRSFDYEQ  +LQ+ V A DSG+PPLSSNVSLS
Sbjct: 490 SFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLSSNVSLS 549

Query: 554 LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLL 613
           LFVLDQNDNAPEILYPA PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSY LL
Sbjct: 550 LFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLL 609

Query: 614 KASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIP 673
           KASEPGLF+VG HTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTLTVAVAD IP
Sbjct: 610 KASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTVAVADRIP 669

Query: 674 QVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASG 733
            +LADLGS E  A    SDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASG
Sbjct: 670 DILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASG 729

Query: 734 GGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKND 793
           G LTG+  SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK D
Sbjct: 730 GSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKD 789

Query: 794 ----PLSLLDDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDT 849
               P SLL++ +   E+T    QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDT
Sbjct: 790 FLSAPQSLLEEER---EET-FSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDT 845

Query: 850 EMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLT 909
           EMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLT
Sbjct: 846 EMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLT 905

Query: 910 NAAGKRDGKAPAGGNGNKKKSGKKEKK 936
           NAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 906 NAAGKRDGKAPAGGNGNKKKSGKKEKK 932


>gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precursor
           [Homo sapiens]
          Length = 935

 Score = 1378 bits (3566), Expect = 0.0
 Identities = 698/933 (74%), Positives = 785/933 (84%), Gaps = 2/933 (0%)

Query: 6   NRSKESKDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAE 65
           NR +       L+LLC+F G      ARQI YS+PEE EKGSFVGNISKDLGL PRELA+
Sbjct: 3   NRLQRGDRSRLLLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAK 62

Query: 66  RGVRIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEI 125
           RGVRIVSRG+TQLF++NPRSGSLITAGRIDREELC   + C ++  +LVED +K++G+E+
Sbjct: 63  RGVRIVSRGKTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEV 122

Query: 126 EVTDINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLR 185
           E+ DINDNAP FQ + +++K++E+   G RF LP A DPDVGVNSLQSYQLSPN +FSL+
Sbjct: 123 EIIDINDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQ 182

Query: 186 VQSRANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPV 245
           ++ R +G K PELVLE SLDRE+EA H L+LTA DGGDP+R G V + V V D ND+ P+
Sbjct: 183 LRGRTDGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPM 242

Query: 246 FTLPEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEI 305
           FT   YRVSVPEN+  GT++L V ATD DEG NGEV YSFR +       FQL+  TGE+
Sbjct: 243 FTQSVYRVSVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEV 302

Query: 306 KISENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSP 365
           ++  +LD+E+  FYE+EIQ +DGG    T  +LITV DVNDN+PE+TITS  + + E+SP
Sbjct: 303 QVRGSLDFEKYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSP 362

Query: 366 LGTVVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNIT 425
            GTV+ALLNV D DS +NGQV+C I  +LPFKLEK+  +YY+L+  R LDRE V SYNIT
Sbjct: 363 PGTVIALLNVQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNIT 422

Query: 426 VTATDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDS 485
           +TATD GSPPLS E H  L VAD NDNPP F   SY  YIPENN RGASIFSVTALDPDS
Sbjct: 423 LTATDQGSPPLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDS 482

Query: 486 KENAQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPP 545
           K+NA + YSL +DT+QGVPLSSY+SINS+TGVLYAL+SFDYEQF +L+++V A DSGDPP
Sbjct: 483 KQNALVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPP 542

Query: 546 LSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQN 605
           LSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQN
Sbjct: 543 LSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQN 602

Query: 606 AWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT 665
           AWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT
Sbjct: 603 AWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT 662

Query: 666 VAVADSIPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHK 725
           VAVADSIP+VLADLGS ES ANSETSDL+LYLVVAVAAVSC+FL FVIVLLA RL RWHK
Sbjct: 663 VAVADSIPEVLADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHK 722

Query: 726 SRLLQASGGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLIS 785
           SRLLQAS GGL G+  SHFVGVDGV+AFLQTYSHEVSL ADS+KSHLIFPQPNY DTLIS
Sbjct: 723 SRLLQASEGGLAGMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTLIS 782

Query: 786 QESCEKNDPLSLLDDSKFPIE--DTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWP 843
           QESCEK++PL + +DS   +   D     QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWP
Sbjct: 783 QESCEKSEPLLIAEDSAIILGKCDPTSNQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWP 842

Query: 844 NNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPG 903
           NNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPG
Sbjct: 843 NNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPG 902

Query: 904 SNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 936
           SNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 903 SNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 935


>gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score = 1378 bits (3566), Expect = 0.0
 Identities = 698/923 (75%), Positives = 786/923 (85%), Gaps = 1/923 (0%)

Query: 14  CSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSR 73
           C  L+L  +  G   E G+ QI YS+PEEL+KGSFVGNI+KDLGL P+ELAERGVRIVSR
Sbjct: 10  CGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSR 69

Query: 74  GRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDN 133
           GRTQLF+LNPRSGSL+TAGRIDREELCAQS  CVV+FNILVE+++K++G+E+E+ DINDN
Sbjct: 70  GRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDN 129

Query: 134 APKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGV 193
            P+F+ E L VK+NEN AAG R  LP A D DVGVNSL+SYQLS N HFSL V S  +G 
Sbjct: 130 FPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQ 189

Query: 194 KYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRV 253
           KYPELVLE  LDRE+E +H L+LTA DGGDP+ SGT  + VTV DANDNAP+FT  EY V
Sbjct: 190 KYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSV 249

Query: 254 SVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDY 313
           SVPEN+PVGT+LL +TATD DEG NG++TYSFR   +     FQL+   GEI   ++LDY
Sbjct: 250 SVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDY 309

Query: 314 EETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALL 373
           EE+ FY +E+ A+DGGA +A+AKV++TV+DVNDN+PE+ +TSL S ++ED   GTV+AL 
Sbjct: 310 EESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALF 369

Query: 374 NVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGS 433
           +VHD DS +NG++ CSI   LPFKLEKS+D+YY L+  R LDRE+ S YNIT+T  D G+
Sbjct: 370 SVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGT 429

Query: 434 PPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIY 493
           PPLSTE+H  L+VAD+NDNPP F Q SY T + ENN RG SIFSVTA DPDS +NA++ Y
Sbjct: 430 PPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTY 489

Query: 494 SLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLS 553
           SLAEDT QG PLSSY+SINSDTGVLYALRSFDYEQ  +LQ+ VTASDSG+PPLSSNVSLS
Sbjct: 490 SLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLS 549

Query: 554 LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLL 613
           LFVLDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSYRLL
Sbjct: 550 LFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLL 609

Query: 614 KASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIP 673
           KASEPGLFAVG HTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+TVAVAD IP
Sbjct: 610 KASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIP 669

Query: 674 QVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASG 733
            +LADLGS ++P + E  DLTLYLVVAVAAVSCVFLAFVIVLL  RLRRWHKSRLLQA G
Sbjct: 670 DILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEG 729

Query: 734 GGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKND 793
             L GV  SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL+S+ESCEK++
Sbjct: 730 SRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEESCEKSE 789

Query: 794 PLSLLDDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQ 853
           PL L+ D     ++   V QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQ
Sbjct: 790 PL-LMSDKVDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQ 848

Query: 854 AMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAG 913
           AMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAG
Sbjct: 849 AMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAG 908

Query: 914 KRDGKAPAGGNGNKKKSGKKEKK 936
           KRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 909 KRDGKAPAGGNGNKKKSGKKEKK 931


>gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1375 bits (3559), Expect = 0.0
 Identities = 705/919 (76%), Positives = 769/919 (83%)

Query: 18  VLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGRTQ 77
           VLL    G  W A A QI YSIPEELEKGSFVGNI KDLGL P+ELAE GVRIVSRGR Q
Sbjct: 14  VLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSRGRMQ 73

Query: 78  LFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAPKF 137
           LFSLNPR+GSL+TAGRIDREELCAQS RC+VSFNILVED++ L+ +E+E+ DINDN P+F
Sbjct: 74  LFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDNTPRF 133

Query: 138 QAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKYPE 197
             E L+VKI EN A   RFPL E  DPDVG+NSLQ ++LS N HFS+ VQS A+G KYPE
Sbjct: 134 LKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGPKYPE 193

Query: 198 LVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSVPE 257
           LVLE +LDRE EA++ LVLTA DGGDP+RS    + VTV D NDN P+FT P YRVSVPE
Sbjct: 194 LVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRVSVPE 253

Query: 258 NLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEETG 317
           NLPVGT +L VTATD+DEG +GEVTYSF K+ +     F LN  TGEI  S NLDYE++ 
Sbjct: 254 NLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDYEDSS 313

Query: 318 FYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNVHD 377
           FYE+ ++A DG      AKVLIT+ DVNDN PE+ +TS    + E +P GTV+AL  V D
Sbjct: 314 FYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQVFD 373

Query: 378 LDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPPLS 437
            DS  NG VTCSI   LPF+LEKS+ +YYRLV + ALDRE+V  YNITVTATD G+PPLS
Sbjct: 374 RDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGTPPLS 433

Query: 438 TEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSLAE 497
           TE    L VAD NDNPPTF   SY  Y+ ENN RGASIFSV ALDPD  +NAQ+ YSLAE
Sbjct: 434 TETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYSLAE 493

Query: 498 DTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLFVL 557
           DT+QG PLSSY+SINSDTG+LYALRSFDYEQ  +LQ+ VTASDSGDPPLSSNVSLSLFVL
Sbjct: 494 DTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSLFVL 553

Query: 558 DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASE 617
           DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASE
Sbjct: 554 DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASE 613

Query: 618 PGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVLA 677
           PGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP +LA
Sbjct: 614 PGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILA 673

Query: 678 DLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLT 737
           DLGS E  A    SDLTLYLVVAVAAVSCVFLAFVIVLLA RL+RWHKSRLLQASGGGL 
Sbjct: 674 DLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQASGGGLA 733

Query: 738 GVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKNDPLSL 797
            + GSHFVGV+GVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI+QES EK++PL +
Sbjct: 734 SMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLINQESYEKSEPLLI 793

Query: 798 LDDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMIL 857
             D      +   + QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMIL
Sbjct: 794 TQDLLETKGEPRQLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMIL 853

Query: 858 ASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDG 917
           ASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDG
Sbjct: 854 ASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDG 913

Query: 918 KAPAGGNGNKKKSGKKEKK 936
           KAPAGGNGNKKKSGKKEKK
Sbjct: 914 KAPAGGNGNKKKSGKKEKK 932


>gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score = 1371 bits (3549), Expect = 0.0
 Identities = 703/932 (75%), Positives = 773/932 (82%), Gaps = 9/932 (0%)

Query: 9   KESKDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGV 68
           K+   CS L+LLCL   +  EAGA  I YS+PEE +KGSFVGNI+KDLGL P+ELA+ GV
Sbjct: 5   KKLTGCSRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGV 64

Query: 69  RIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVT 128
           RIVSRGR  LF+LNPRSGSLITA RIDREELCAQS  C+VSFNILVED++KLF +E+E+ 
Sbjct: 65  RIVSRGRMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEII 124

Query: 129 DINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQS 188
           DINDN P+FQ E L+ K+NE    G R  LP   D DVG+NSLQSYQLS N HFSL VQ 
Sbjct: 125 DINDNTPQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQ 184

Query: 189 RANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTL 248
            A+G ++PE+VL+  LDREEEA+HHL+LTASDGG+P+RSGT+ + + V DANDN P FT 
Sbjct: 185 GADGPQHPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQ 244

Query: 249 PEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKIS 308
            +Y ++VPEN+P+GTQLL V ATD DEGANGEVTYSF  +       F+L+ YTGEI   
Sbjct: 245 AQYHINVPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNK 304

Query: 309 ENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGT 368
           E LD+EE   Y +E+QA+DG   +A  KVLI V DVNDN+PE+TITS+ + V E+ P GT
Sbjct: 305 EPLDFEEYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGT 364

Query: 369 VVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTA 428
           ++AL++VHD DS  NG  TC I   LPFKLEK +D+YYRLV  R LDRE +S YNIT+TA
Sbjct: 365 IIALISVHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITA 424

Query: 429 TDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKEN 488
            D G+P LSTE H  L V DINDN P F Q SY  YIPENN RGASIFSV A D DS EN
Sbjct: 425 IDQGTPALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNEN 484

Query: 489 AQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSS 548
           AQI YSL EDTIQG PLS+Y+SINSDTGVLYALRSFDYEQF ++Q++V A DSGDPPLSS
Sbjct: 485 AQITYSLIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSS 544

Query: 549 NVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWL 608
           NVSLSLF+LDQNDNAPEILYPALPTDGSTGVELAP SAEPGYLVTKVVAVDRDSGQNAWL
Sbjct: 545 NVSLSLFLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWL 604

Query: 609 SYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAV 668
           SYRLLKASEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAV
Sbjct: 605 SYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAV 664

Query: 669 ADSIPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRL 728
           AD I  +LADLGS E  A    SDLTLYLVVA AAVSCVFLAFVIVLLAHRLRRWHKSRL
Sbjct: 665 ADRISDILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRL 724

Query: 729 LQASGGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQES 788
           LQASGGGL  + GSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQES
Sbjct: 725 LQASGGGLASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQES 784

Query: 789 CEK----NDPLSLLDDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 844
           CEK    + P SLL+D K P        QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
Sbjct: 785 CEKKGFLSAPQSLLEDKKEPFSQ-----QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 839

Query: 845 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 904
           NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
Sbjct: 840 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 899

Query: 905 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 936
           NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 900 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931


>gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score = 1370 bits (3546), Expect = 0.0
 Identities = 697/924 (75%), Positives = 773/924 (83%), Gaps = 1/924 (0%)

Query: 13  DCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVS 72
           D + L+ +CL  G+  E  A QI YS+ EE E+GS VGNI+KDLGLAPRELAERGVRIVS
Sbjct: 9   DHTRLLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELAERGVRIVS 68

Query: 73  RGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDIND 132
           RGRTQLF+LNPRSG+L+TAGRIDREELC +S  CV +  IL+ED VK+  +E+E+ D+ND
Sbjct: 69  RGRTQLFALNPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVEVEIIDVND 128

Query: 133 NAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANG 192
           N P F  E  ++K+ EN   G RFPLPEA DPDVGVNSLQ YQL+ N +FSL VQS A+G
Sbjct: 129 NPPSFGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSLDVQSGADG 188

Query: 193 VKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYR 252
           +KYPELVLE +LDREEEA+HHLVLTA DGGDP+RSGT  + + + D NDNAPVFT PEY 
Sbjct: 189 IKYPELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAPVFTQPEYH 248

Query: 253 VSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLD 312
           VSV EN+PVGT+LLTV ATD DEGANG+VTYSFRK+ D     FQLN  +G+I I   LD
Sbjct: 249 VSVRENVPVGTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGDITILGGLD 308

Query: 313 YEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVAL 372
           YE++GFY+I+++A DG    A +KVL+TV D NDN+PE+T+TSL S V E S  GTV+AL
Sbjct: 309 YEDSGFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESSSPGTVIAL 368

Query: 373 LNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGG 432
            NVHD DS  NG VTCSI   LPF LEK+  +YYRL+ HR LDRE+VS YNITVTATD G
Sbjct: 369 FNVHDSDSGGNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNITVTATDQG 428

Query: 433 SPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQII 492
           +PPLSTE H  LQV DINDNPPTF   SY  YIPENN RGASI S+TA DPDS +NA+I 
Sbjct: 429 TPPLSTETHISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPDSGDNARIT 488

Query: 493 YSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSL 552
           YSLAEDT QG PLSSY+SINS+TG+LYAL SFDYEQF +LQ+ +TASDSGDPPLSSNVSL
Sbjct: 489 YSLAEDTFQGAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDPPLSSNVSL 548

Query: 553 SLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL 612
           SLFVLDQNDN PEILYP  PTDGSTGVELAPRSA+ GYLVTKVVAVDRDSGQNAWLSY L
Sbjct: 549 SLFVLDQNDNVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQNAWLSYSL 608

Query: 613 LKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI 672
           LK+SEPGLFAVG HTGEVRTARALLDRDALKQ LVV VQDHGQPPLSATVTLTVAVADSI
Sbjct: 609 LKSSEPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTLTVAVADSI 668

Query: 673 PQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQAS 732
           P VLADLGS +  A+ + S LTLYLVVAVAAVSCVFLAFV VLLA +LRRWHKSRLL A 
Sbjct: 669 PDVLADLGSLKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWHKSRLLHAE 728

Query: 733 GGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKN 792
           G  L GV  SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIF QP+YADTLIS+ESCEK+
Sbjct: 729 GSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQPSYADTLISRESCEKS 788

Query: 793 DPLSLLDDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEML 852
           +PL L+       +  P + QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEML
Sbjct: 789 EPL-LITQDLLETKGDPNLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEML 847

Query: 853 QAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAA 912
           QAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAA
Sbjct: 848 QAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAA 907

Query: 913 GKRDGKAPAGGNGNKKKSGKKEKK 936
           GKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 908 GKRDGKAPAGGNGNKKKSGKKEKK 931


>gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precursor
           [Homo sapiens]
          Length = 828

 Score = 1196 bits (3093), Expect = 0.0
 Identities = 613/796 (77%), Positives = 666/796 (83%)

Query: 17  LVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGRT 76
           LVLLC   G+ WEA A QI YS+PEE EKG  VGNISKDL L PRELAER VRIVSRGRT
Sbjct: 13  LVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGRT 72

Query: 77  QLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAPK 136
           QLFSLNPRSG+L+TAGRIDREELCAQS RC+V+F +LVEDRVKL+GIEIEVTDIND+APK
Sbjct: 73  QLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAPK 132

Query: 137 FQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKYP 196
           FQAE+L+VKINE    G R+PLPEAIDPDVGVNSLQSYQLSPN HFSL VQ+  NG   P
Sbjct: 133 FQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAINP 192

Query: 197 ELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSVP 256
           ELVLE +LDREE   HHLVLTASDGG+P RS TV + VTV D NDNAPVF    YRV V 
Sbjct: 193 ELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVL 252

Query: 257 ENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEET 316
           EN+P GT LLT TA+D DEG NG+V Y F K+ + Q L FQLN+ TGEI  +++LDYEE 
Sbjct: 253 ENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEEC 312

Query: 317 GFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNVH 376
            FYE+EIQAEDGG      KVLI+VEDVNDN PE+TITSLFSPV ED+P GTV+ L N H
Sbjct: 313 SFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAH 372

Query: 377 DLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPPL 436
           D DS +NGQV CSI   L F LE S + YYRL+  + LDRE+ S YNITVTATD G+PPL
Sbjct: 373 DRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPL 432

Query: 437 STEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSLA 496
           STE H  LQV DINDNPP FSQ SY  Y+PENNARG SIFSV A DPDS EN+++IYSLA
Sbjct: 433 STEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLA 492

Query: 497 EDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLFV 556
           EDTIQG PLS+Y+SINSDTGVLYAL SFDYEQF +LQMQVTASDSG PPLSSNVSL LFV
Sbjct: 493 EDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFV 552

Query: 557 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 616
           LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL KAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKAS 612

Query: 617 EPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 676
           EPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVA+ADSIP +L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDIL 672

Query: 677 ADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGL 736
           ADLGS + PA+ E SDLTLYLVVAVA VSCVFL FVI LLA RLR WH S LL+A+  GL
Sbjct: 673 ADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDGL 732

Query: 737 TGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKNDPLS 796
            GV  SHFVGVDGVRAFLQTYS E SLTADSRKSHLIFPQPNYADTLISQ+SCEKN+PL 
Sbjct: 733 AGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLISQQSCEKNEPLC 792

Query: 797 LLDDSKFPIEDTPLVP 812
           +  DSKFPIEDTPLVP
Sbjct: 793 VSVDSKFPIEDTPLVP 808


>gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precursor
           [Homo sapiens]
          Length = 820

 Score = 1164 bits (3010), Expect = 0.0
 Identities = 596/800 (74%), Positives = 665/800 (83%)

Query: 12  KDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIV 71
           +D  GLVLL +  G  WE G  QI YS+PEELEKGS VG+IS+DLGL PRELAERGVRI+
Sbjct: 8   RDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRII 67

Query: 72  SRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDIN 131
            RGRTQLF+LNPRSGSL+TAGRIDREELC  + +C ++ +IL+ED+VK++G+E+EV DIN
Sbjct: 68  PRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDIN 127

Query: 132 DNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRAN 191
           DNAP F+   L++KI+EN A  MRFPLP A DPD+G NSLQSY+LSPN HFSL VQ+ A+
Sbjct: 128 DNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGAD 187

Query: 192 GVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEY 251
           G KYPELVL+ +LDREE+A HHLVLTASDGGDP+R+GT  + V V DANDNAP F  PEY
Sbjct: 188 GSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEY 247

Query: 252 RVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENL 311
           R SVPENL +GTQLL V ATD DEG N EV YSFR + D     F+L+  +G I     L
Sbjct: 248 RASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGEL 307

Query: 312 DYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVA 371
           D+EE+GFY++E+QA D   Y A AKVLITV DVNDN+PE+ +TSL S V E+SP GT++A
Sbjct: 308 DHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIA 367

Query: 372 LLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDG 431
           LLNV+D DSE+NGQV C I   LPFKLEKS  +YY LV    LDREQV SYNITVTATD 
Sbjct: 368 LLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDR 427

Query: 432 GSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQI 491
           G+PPLSTE H  L VAD NDNPP F Q SY  YIPENN RG S+ SVTA DPD +ENAQI
Sbjct: 428 GTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQI 487

Query: 492 IYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVS 551
            YSLAE+TIQG  LSSY+SINSDTGVLYAL SFDYEQF +LQ++V A D+G PPLSSNVS
Sbjct: 488 TYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVS 547

Query: 552 LSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR 611
           LSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR
Sbjct: 548 LSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR 607

Query: 612 LLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADS 671
           LLKASEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADS
Sbjct: 608 LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADS 667

Query: 672 IPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQA 731
           IPQVLADLGS ESPANSETSDLTLYLVVAVAAVSCVFLAFVI+LLA RLRRWHKSRLLQA
Sbjct: 668 IPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQA 727

Query: 732 SGGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK 791
           SGGGLTG   SHFVGVDGV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+SQES EK
Sbjct: 728 SGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEK 787

Query: 792 NDPLSLLDDSKFPIEDTPLV 811
           ++PL L  DS F  +   L+
Sbjct: 788 SEPLLLSGDSVFSKDSHGLI 807


>gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precursor
           [Homo sapiens]
          Length = 817

 Score = 1151 bits (2977), Expect = 0.0
 Identities = 590/803 (73%), Positives = 663/803 (82%)

Query: 13  DCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVS 72
           D  G  LL +  G PWEA A +I YS+ EE +KGSFVG+I+KDLGL PRELAERGVRI+S
Sbjct: 9   DYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIIS 68

Query: 73  RGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDIND 132
           RGRTQLF+LN RSGSL+TAGRIDREE+CAQSARC+V+FNIL+ED++ L+ I++E+ DIND
Sbjct: 69  RGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDIND 128

Query: 133 NAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANG 192
           N P+F  E ++VKI EN A G+RFPL EA DPDVG NSLQSYQLSPN+HFSL VQS  + 
Sbjct: 129 NVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDE 188

Query: 193 VKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYR 252
            KYPELVLE  LDREEE +HHLVLTASDGGDP RS T  + VTV D ND+ PVF+LP+Y+
Sbjct: 189 TKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQ 248

Query: 253 VSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLD 312
           V+VPEN+PVGT+LLTV A D DEG NGEVTYSFRK+       F LN  TGEI   E LD
Sbjct: 249 VTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLD 308

Query: 313 YEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVAL 372
           YEET FYE+E+QA+DG   L  AKVLITV DVNDN+PE+T+TSL S + ED+PLGTV+AL
Sbjct: 309 YEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIAL 368

Query: 373 LNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGG 432
             + D DS +NG+VTC+I   LPFKLEKSID+YYRLV  + LDRE +S YNIT+ ATDGG
Sbjct: 369 FYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGG 428

Query: 433 SPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQII 492
           +PPLS E H  +QVAD NDNPPTF   SY  YI ENN RGASIF VTA D DS++NAQI 
Sbjct: 429 TPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQIT 488

Query: 493 YSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSL 552
           YSLAEDTIQG P+SSY+SINSDTGVLYAL+SFDYEQ  ELQ++VTA DSGDPPLSSN+SL
Sbjct: 489 YSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSL 548

Query: 553 SLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL 612
           SLFVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQNAWLSY L
Sbjct: 549 SLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLL 608

Query: 613 LKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI 672
           LKASEPGLFAVG +TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI
Sbjct: 609 LKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI 668

Query: 673 PQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQAS 732
           P+VLADLGS E        DLTLYLVVAVA VSCVFLAFV+VLLA RLRRWHKSRLLQAS
Sbjct: 669 PEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQAS 728

Query: 733 GGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKN 792
            GGL  V  SHFVG+DGV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D LISQESCEKN
Sbjct: 729 EGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKN 788

Query: 793 DPLSLLDDSKFPIEDTPLVPQAP 815
           D L    D +   E+ P +  +P
Sbjct: 789 DSLLTSVDFQECKENLPSIQVSP 811


>gi|7662056 protocadherin gamma subfamily A, 8 isoform 2 precursor
           [Homo sapiens]
          Length = 820

 Score = 1150 bits (2975), Expect = 0.0
 Identities = 596/795 (74%), Positives = 658/795 (82%), Gaps = 4/795 (0%)

Query: 1   MAAQRNRSKESKDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAP 60
           MAA ++R +  +    L+LLC   G  WE G  QI YS+PEE +KGSFVGNISKDLGL P
Sbjct: 1   MAAPQSRPRRGE----LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDP 56

Query: 61  RELAERGVRIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKL 120
           R+LA+ GVRIVSRGRTQLF+LNPRSGSLITAGRIDREELCAQS RC+++ N LVED+ KL
Sbjct: 57  RKLAKHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKL 116

Query: 121 FGIEIEVTDINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNK 180
           FG+EIE+ DINDN PKFQ E+L+VKINE    G R+PLPEA+DPDVGVNSLQSYQLSPN 
Sbjct: 117 FGVEIEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNH 176

Query: 181 HFSLRVQSRANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDAN 240
           HFSL VQ+  NG   PELVLE +LDREEEA HHLVLTASDGG P RS TV + VTV D N
Sbjct: 177 HFSLDVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTN 236

Query: 241 DNAPVFTLPEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNK 300
           DNAPVF  P YRV V EN+P GT+LLTVTA+D DEG NG+V Y FRK+ + Q   FQLN+
Sbjct: 237 DNAPVFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNE 296

Query: 301 YTGEIKISENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPV 360
            TGEI I+++LDYEE  FYE+EIQAED GA L   K+LI+VEDVNDN PE+ ITSLFSPV
Sbjct: 297 NTGEISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPV 356

Query: 361 TEDSPLGTVVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVS 420
            E+S  GTV+A L+VHD DS +NGQV C     LPFKLEKSI +YYRLV  + LDRE VS
Sbjct: 357 LENSLPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVS 416

Query: 421 SYNITVTATDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTA 480
            YNITV A+D G+PPLSTE    L VADINDNPPTF   SY  YI ENN RGASIFS+TA
Sbjct: 417 IYNITVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTA 476

Query: 481 LDPDSKENAQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASD 540
            DPDS+ENAQ+ YS+ EDT+QG PLSSYISINSDTGVLYAL+SFDYEQ  +LQ+ VTASD
Sbjct: 477 HDPDSQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASD 536

Query: 541 SGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDR 600
           SGDPPLSSN+SLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVDR
Sbjct: 537 SGDPPLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDR 596

Query: 601 DSGQNAWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSA 660
           DSGQNAWLSYRLLKASEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSA
Sbjct: 597 DSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSA 656

Query: 661 TVTLTVAVADSIPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRL 720
           TVTLTVAVADSIP+VL +LGS +   +   S LTLYLVVAVAA+SCVFLAFV VLL  RL
Sbjct: 657 TVTLTVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRL 716

Query: 721 RRWHKSRLLQASGGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYA 780
           RRWHKSRLLQ SGG L GV  SHFVGV+ V+AFLQTYS EVSLTADSRKSHLIFPQPNYA
Sbjct: 717 RRWHKSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYA 776

Query: 781 DTLISQESCEKNDPL 795
           D LISQE CEKND L
Sbjct: 777 DMLISQEGCEKNDSL 791


>gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precursor
           [Homo sapiens]
          Length = 829

 Score = 1136 bits (2939), Expect = 0.0
 Identities = 577/785 (73%), Positives = 650/785 (82%)

Query: 16  GLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGR 75
           GL LLC   G   E G+ QI YS+ EEL+KGSFVGNI+ DLGL PRELAERGVRIVSRGR
Sbjct: 12  GLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGR 71

Query: 76  TQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAP 135
           TQLFSLNP+SGSL+TA RIDREELCAQ   C+V  NILVED++K+F +EIE+ DINDNAP
Sbjct: 72  TQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAP 131

Query: 136 KFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKY 195
            F  E L++KI E    G RFP+  A DPDVG+NSLQ+Y+LSPN +FSL V S + G KY
Sbjct: 132 NFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKY 191

Query: 196 PELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSV 255
           PELVLE +LDRE++ IH LVL ASDGGDP+ SG + + V V DANDN P+FT PEYRVSV
Sbjct: 192 PELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSV 251

Query: 256 PENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEE 315
            EN+PVGT+LLTV ATD DEG N +V+Y   K+P      F LN  +GE+ I ++LDYE+
Sbjct: 252 WENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYED 311

Query: 316 TGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNV 375
             FYEI+I+A+DG   L+ AK+L+TV DVNDN+PE+TITSL S V E+  +G  +AL++V
Sbjct: 312 AMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDV 371

Query: 376 HDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPP 435
           HD DS QNGQV   +L  LPFKLEKSID YYRLV   +LDREQ+S YNI++ A+DGGSPP
Sbjct: 372 HDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPP 431

Query: 436 LSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSL 495
           LSTE H  L V DINDNPPTF  +SY  YIPENN RGASIFSVTA DPDS  NA+I Y+L
Sbjct: 432 LSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYAL 491

Query: 496 AEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLF 555
            EDT+QG PLSS++SINS+TGVLYALRSFDYEQF +L++ VTASDSG+PPLSSNVSL+LF
Sbjct: 492 TEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLF 551

Query: 556 VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA 615
           VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA
Sbjct: 552 VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA 611

Query: 616 SEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQV 675
           SEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP +
Sbjct: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDI 671

Query: 676 LADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGG 735
           LADLGS E  A    SDLTLYLVVAVAAVSCVFLAFVIVLLA RLRRWHKSRLLQASGGG
Sbjct: 672 LADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGG 731

Query: 736 LTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKNDPL 795
           L    GSHFVG DGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK++PL
Sbjct: 732 LASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPL 791

Query: 796 SLLDD 800
            +  D
Sbjct: 792 LITQD 796


>gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precursor
           [Homo sapiens]
          Length = 823

 Score = 1134 bits (2932), Expect = 0.0
 Identities = 577/793 (72%), Positives = 652/793 (82%), Gaps = 4/793 (0%)

Query: 14  CSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSR 73
           C  LVLLC      WEA A QI YS+ EE+++GSFVGNI+KDLGL P  LAE+GVRIVSR
Sbjct: 10  CRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQGVRIVSR 69

Query: 74  GRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDN 133
           GR+QLF+LNPRSGSL+TA RIDREELCAQSA C+++FNIL+ED++ ++ +E+E+TDINDN
Sbjct: 70  GRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVEITDINDN 129

Query: 134 APKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGV 193
           AP+F  E L++KI+E    G R PL  A D DVG N+LQ Y L+PN HFSL V+  A+G 
Sbjct: 130 APRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVRRGADGN 189

Query: 194 KYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRV 253
           KYPELVLE SLDREEEA+HHLVL ASDGGDP+ SGT  + V V DANDNAPVFT PEYR+
Sbjct: 190 KYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRI 249

Query: 254 SVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDY 313
           S+PEN  VGT++LTVTATD DEG   +V Y   K P      F+L   +GE+ I ++LDY
Sbjct: 250 SIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDY 309

Query: 314 EETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALL 373
           E+  F+EI+I+A+DG   L  AKV++TV DVNDN+PE  +TS  S V+EDS  GT++ L 
Sbjct: 310 EDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPGTIIGLF 369

Query: 374 NVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGS 433
           NVHD DS QN   TCS+   LPFKLEKS+D+YYRLV  RALDREQ S YNIT+TA DGG+
Sbjct: 370 NVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITLTAKDGGN 429

Query: 434 PPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIY 493
           P LST+AH +LQVADINDN P FS+ SY TYIPENN RGAS+FSVTA DPDS +NA + Y
Sbjct: 430 PSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSNDNAHVTY 489

Query: 494 SLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLS 553
           S AEDT+QG PLSSYISINSDTGVLYALRSFDYEQ  +LQ+ V A DSG+PPLSSNVSLS
Sbjct: 490 SFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLSSNVSLS 549

Query: 554 LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLL 613
           LFVLDQNDNAPEILYPA PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSY LL
Sbjct: 550 LFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLL 609

Query: 614 KASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIP 673
           KASEPGLF+VG HTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTLTVAVAD IP
Sbjct: 610 KASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTVAVADRIP 669

Query: 674 QVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASG 733
            +LADLGS E  A    SDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASG
Sbjct: 670 DILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASG 729

Query: 734 GGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKND 793
           G LTG+  SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK D
Sbjct: 730 GSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKD 789

Query: 794 ----PLSLLDDSK 802
               P SLL++ +
Sbjct: 790 FLSAPQSLLEEER 802


>gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precursor
           [Homo sapiens]
          Length = 837

 Score = 1131 bits (2925), Expect = 0.0
 Identities = 573/796 (71%), Positives = 659/796 (82%)

Query: 6   NRSKESKDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAE 65
           NR +       L+LLC+F G      ARQI YS+PEE EKGSFVGNISKDLGL PRELA+
Sbjct: 3   NRLQRGDRSRLLLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAK 62

Query: 66  RGVRIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEI 125
           RGVRIVSRG+TQLF++NPRSGSLITAGRIDREELC   + C ++  +LVED +K++G+E+
Sbjct: 63  RGVRIVSRGKTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEV 122

Query: 126 EVTDINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLR 185
           E+ DINDNAP FQ + +++K++E+   G RF LP A DPDVGVNSLQSYQLSPN +FSL+
Sbjct: 123 EIIDINDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQ 182

Query: 186 VQSRANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPV 245
           ++ R +G K PELVLE SLDRE+EA H L+LTA DGGDP+R G V + V V D ND+ P+
Sbjct: 183 LRGRTDGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPM 242

Query: 246 FTLPEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEI 305
           FT   YRVSVPEN+  GT++L V ATD DEG NGEV YSFR +       FQL+  TGE+
Sbjct: 243 FTQSVYRVSVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEV 302

Query: 306 KISENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSP 365
           ++  +LD+E+  FYE+EIQ +DGG    T  +LITV DVNDN+PE+TITS  + + E+SP
Sbjct: 303 QVRGSLDFEKYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSP 362

Query: 366 LGTVVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNIT 425
            GTV+ALLNV D DS +NGQV+C I  +LPFKLEK+  +YY+L+  R LDRE V SYNIT
Sbjct: 363 PGTVIALLNVQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNIT 422

Query: 426 VTATDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDS 485
           +TATD GSPPLS E H  L VAD NDNPP F   SY  YIPENN RGASIFSVTALDPDS
Sbjct: 423 LTATDQGSPPLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDS 482

Query: 486 KENAQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPP 545
           K+NA + YSL +DT+QGVPLSSY+SINS+TGVLYAL+SFDYEQF +L+++V A DSGDPP
Sbjct: 483 KQNALVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPP 542

Query: 546 LSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQN 605
           LSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQN
Sbjct: 543 LSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQN 602

Query: 606 AWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT 665
           AWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT
Sbjct: 603 AWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT 662

Query: 666 VAVADSIPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHK 725
           VAVADSIP+VLADLGS ES ANSETSDL+LYLVVAVAAVSC+FL FVIVLLA RL RWHK
Sbjct: 663 VAVADSIPEVLADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHK 722

Query: 726 SRLLQASGGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLIS 785
           SRLLQAS GGL G+  SHFVGVDGV+AFLQTYSHEVSL ADS+KSHLIFPQPNY DTLIS
Sbjct: 723 SRLLQASEGGLAGMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTLIS 782

Query: 786 QESCEKNDPLSLLDDS 801
           QESCEK++PL + +DS
Sbjct: 783 QESCEKSEPLLIAEDS 798


>gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precursor
           [Homo sapiens]
          Length = 813

 Score = 1128 bits (2918), Expect = 0.0
 Identities = 572/786 (72%), Positives = 658/786 (83%)

Query: 14  CSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSR 73
           C  L+L  +  G   E G+ QI YS+PEEL+KGSFVGNI+KDLGL P+ELAERGVRIVSR
Sbjct: 10  CGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSR 69

Query: 74  GRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDN 133
           GRTQLF+LNPRSGSL+TAGRIDREELCAQS  CVV+FNILVE+++K++G+E+E+ DINDN
Sbjct: 70  GRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDN 129

Query: 134 APKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGV 193
            P+F+ E L VK+NEN AAG R  LP A D DVGVNSL+SYQLS N HFSL V S  +G 
Sbjct: 130 FPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQ 189

Query: 194 KYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRV 253
           KYPELVLE  LDRE+E +H L+LTA DGGDP+ SGT  + VTV DANDNAP+FT  EY V
Sbjct: 190 KYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSV 249

Query: 254 SVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDY 313
           SVPEN+PVGT+LL +TATD DEG NG++TYSFR   +     FQL+   GEI   ++LDY
Sbjct: 250 SVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDY 309

Query: 314 EETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALL 373
           EE+ FY +E+ A+DGGA +A+AKV++TV+DVNDN+PE+ +TSL S ++ED   GTV+AL 
Sbjct: 310 EESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALF 369

Query: 374 NVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGS 433
           +VHD DS +NG++ CSI   LPFKLEKS+D+YY L+  R LDRE+ S YNIT+T  D G+
Sbjct: 370 SVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGT 429

Query: 434 PPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIY 493
           PPLSTE+H  L+VAD+NDNPP F Q SY T + ENN RG SIFSVTA DPDS +NA++ Y
Sbjct: 430 PPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTY 489

Query: 494 SLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLS 553
           SLAEDT QG PLSSY+SINSDTGVLYALRSFDYEQ  +LQ+ VTASDSG+PPLSSNVSLS
Sbjct: 490 SLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLS 549

Query: 554 LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLL 613
           LFVLDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSYRLL
Sbjct: 550 LFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLL 609

Query: 614 KASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIP 673
           KASEPGLFAVG HTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+TVAVAD IP
Sbjct: 610 KASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIP 669

Query: 674 QVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASG 733
            +LADLGS ++P + E  DLTLYLVVAVAAVSCVFLAFVIVLL  RLRRWHKSRLLQA G
Sbjct: 670 DILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEG 729

Query: 734 GGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKND 793
             L GV  SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL+S+ESCEK++
Sbjct: 730 SRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEESCEKSE 789

Query: 794 PLSLLD 799
           PL + D
Sbjct: 790 PLLMSD 795


>gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precursor
           [Homo sapiens]
          Length = 818

 Score = 1127 bits (2915), Expect = 0.0
 Identities = 581/783 (74%), Positives = 643/783 (82%)

Query: 18  VLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGRTQ 77
           VLL    G  W A A QI YSIPEELEKGSFVGNI KDLGL P+ELAE GVRIVSRGR Q
Sbjct: 14  VLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSRGRMQ 73

Query: 78  LFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAPKF 137
           LFSLNPR+GSL+TAGRIDREELCAQS RC+VSFNILVED++ L+ +E+E+ DINDN P+F
Sbjct: 74  LFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDNTPRF 133

Query: 138 QAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKYPE 197
             E L+VKI EN A   RFPL E  DPDVG+NSLQ ++LS N HFS+ VQS A+G KYPE
Sbjct: 134 LKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGPKYPE 193

Query: 198 LVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSVPE 257
           LVLE +LDRE EA++ LVLTA DGGDP+RS    + VTV D NDN P+FT P YRVSVPE
Sbjct: 194 LVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRVSVPE 253

Query: 258 NLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEETG 317
           NLPVGT +L VTATD+DEG +GEVTYSF K+ +     F LN  TGEI  S NLDYE++ 
Sbjct: 254 NLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDYEDSS 313

Query: 318 FYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNVHD 377
           FYE+ ++A DG      AKVLIT+ DVNDN PE+ +TS    + E +P GTV+AL  V D
Sbjct: 314 FYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQVFD 373

Query: 378 LDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPPLS 437
            DS  NG VTCSI   LPF+LEKS+ +YYRLV + ALDRE+V  YNITVTATD G+PPLS
Sbjct: 374 RDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGTPPLS 433

Query: 438 TEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSLAE 497
           TE    L VAD NDNPPTF   SY  Y+ ENN RGASIFSV ALDPD  +NAQ+ YSLAE
Sbjct: 434 TETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYSLAE 493

Query: 498 DTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLFVL 557
           DT+QG PLSSY+SINSDTG+LYALRSFDYEQ  +LQ+ VTASDSGDPPLSSNVSLSLFVL
Sbjct: 494 DTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSLFVL 553

Query: 558 DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASE 617
           DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASE
Sbjct: 554 DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASE 613

Query: 618 PGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVLA 677
           PGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP +LA
Sbjct: 614 PGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILA 673

Query: 678 DLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLT 737
           DLGS E  A    SDLTLYLVVAVAAVSCVFLAFVIVLLA RL+RWHKSRLLQASGGGL 
Sbjct: 674 DLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQASGGGLA 733

Query: 738 GVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKNDPLSL 797
            + GSHFVGV+GVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI+QES EK++PL +
Sbjct: 734 SMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLINQESYEKSEPLLI 793

Query: 798 LDD 800
             D
Sbjct: 794 TQD 796


>gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precursor
           [Homo sapiens]
          Length = 823

 Score = 1123 bits (2905), Expect = 0.0
 Identities = 579/800 (72%), Positives = 649/800 (81%), Gaps = 4/800 (0%)

Query: 9   KESKDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGV 68
           K+   CS L+LLCL   +  EAGA  I YS+PEE +KGSFVGNI+KDLGL P+ELA+ GV
Sbjct: 5   KKLTGCSRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGV 64

Query: 69  RIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVT 128
           RIVSRGR  LF+LNPRSGSLITA RIDREELCAQS  C+VSFNILVED++KLF +E+E+ 
Sbjct: 65  RIVSRGRMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEII 124

Query: 129 DINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQS 188
           DINDN P+FQ E L+ K+NE    G R  LP   D DVG+NSLQSYQLS N HFSL VQ 
Sbjct: 125 DINDNTPQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQ 184

Query: 189 RANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTL 248
            A+G ++PE+VL+  LDREEEA+HHL+LTASDGG+P+RSGT+ + + V DANDN P FT 
Sbjct: 185 GADGPQHPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQ 244

Query: 249 PEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKIS 308
            +Y ++VPEN+P+GTQLL V ATD DEGANGEVTYSF  +       F+L+ YTGEI   
Sbjct: 245 AQYHINVPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNK 304

Query: 309 ENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGT 368
           E LD+EE   Y +E+QA+DG   +A  KVLI V DVNDN+PE+TITS+ + V E+ P GT
Sbjct: 305 EPLDFEEYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGT 364

Query: 369 VVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTA 428
           ++AL++VHD DS  NG  TC I   LPFKLEK +D+YYRLV  R LDRE +S YNIT+TA
Sbjct: 365 IIALISVHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITA 424

Query: 429 TDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKEN 488
            D G+P LSTE H  L V DINDN P F Q SY  YIPENN RGASIFSV A D DS EN
Sbjct: 425 IDQGTPALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNEN 484

Query: 489 AQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSS 548
           AQI YSL EDTIQG PLS+Y+SINSDTGVLYALRSFDYEQF ++Q++V A DSGDPPLSS
Sbjct: 485 AQITYSLIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSS 544

Query: 549 NVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWL 608
           NVSLSLF+LDQNDNAPEILYPALPTDGSTGVELAP SAEPGYLVTKVVAVDRDSGQNAWL
Sbjct: 545 NVSLSLFLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWL 604

Query: 609 SYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAV 668
           SYRLLKASEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAV
Sbjct: 605 SYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAV 664

Query: 669 ADSIPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRL 728
           AD I  +LADLGS E  A    SDLTLYLVVA AAVSCVFLAFVIVLLAHRLRRWHKSRL
Sbjct: 665 ADRISDILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRL 724

Query: 729 LQASGGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQES 788
           LQASGGGL  + GSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQES
Sbjct: 725 LQASGGGLASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQES 784

Query: 789 CEK----NDPLSLLDDSKFP 804
           CEK    + P SLL+D K P
Sbjct: 785 CEKKGFLSAPQSLLEDKKEP 804


>gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precursor
           [Homo sapiens]
          Length = 820

 Score = 1121 bits (2899), Expect = 0.0
 Identities = 572/788 (72%), Positives = 646/788 (81%)

Query: 13  DCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVS 72
           D + L+ +CL  G+  E  A QI YS+ EE E+GS VGNI+KDLGLAPRELAERGVRIVS
Sbjct: 9   DHTRLLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELAERGVRIVS 68

Query: 73  RGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDIND 132
           RGRTQLF+LNPRSG+L+TAGRIDREELC +S  CV +  IL+ED VK+  +E+E+ D+ND
Sbjct: 69  RGRTQLFALNPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVEVEIIDVND 128

Query: 133 NAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANG 192
           N P F  E  ++K+ EN   G RFPLPEA DPDVGVNSLQ YQL+ N +FSL VQS A+G
Sbjct: 129 NPPSFGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSLDVQSGADG 188

Query: 193 VKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYR 252
           +KYPELVLE +LDREEEA+HHLVLTA DGGDP+RSGT  + + + D NDNAPVFT PEY 
Sbjct: 189 IKYPELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAPVFTQPEYH 248

Query: 253 VSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLD 312
           VSV EN+PVGT+LLTV ATD DEGANG+VTYSFRK+ D     FQLN  +G+I I   LD
Sbjct: 249 VSVRENVPVGTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGDITILGGLD 308

Query: 313 YEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVAL 372
           YE++GFY+I+++A DG    A +KVL+TV D NDN+PE+T+TSL S V E S  GTV+AL
Sbjct: 309 YEDSGFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESSSPGTVIAL 368

Query: 373 LNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGG 432
            NVHD DS  NG VTCSI   LPF LEK+  +YYRL+ HR LDRE+VS YNITVTATD G
Sbjct: 369 FNVHDSDSGGNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNITVTATDQG 428

Query: 433 SPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQII 492
           +PPLSTE H  LQV DINDNPPTF   SY  YIPENN RGASI S+TA DPDS +NA+I 
Sbjct: 429 TPPLSTETHISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPDSGDNARIT 488

Query: 493 YSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSL 552
           YSLAEDT QG PLSSY+SINS+TG+LYAL SFDYEQF +LQ+ +TASDSGDPPLSSNVSL
Sbjct: 489 YSLAEDTFQGAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDPPLSSNVSL 548

Query: 553 SLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL 612
           SLFVLDQNDN PEILYP  PTDGSTGVELAPRSA+ GYLVTKVVAVDRDSGQNAWLSY L
Sbjct: 549 SLFVLDQNDNVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQNAWLSYSL 608

Query: 613 LKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI 672
           LK+SEPGLFAVG HTGEVRTARALLDRDALKQ LVV VQDHGQPPLSATVTLTVAVADSI
Sbjct: 609 LKSSEPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTLTVAVADSI 668

Query: 673 PQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQAS 732
           P VLADLGS +  A+ + S LTLYLVVAVAAVSCVFLAFV VLLA +LRRWHKSRLL A 
Sbjct: 669 PDVLADLGSLKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWHKSRLLHAE 728

Query: 733 GGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKN 792
           G  L GV  SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIF QP+YADTLIS+ESCEK+
Sbjct: 729 GSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQPSYADTLISRESCEKS 788

Query: 793 DPLSLLDD 800
           +PL +  D
Sbjct: 789 EPLLITQD 796


>gi|11128037 protocadherin gamma subfamily B, 1 isoform 1 precursor
           [Homo sapiens]
          Length = 927

 Score =  921 bits (2381), Expect = 0.0
 Identities = 493/935 (52%), Positives = 636/935 (68%), Gaps = 15/935 (1%)

Query: 7   RSKESKDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAER 66
           R++E++     VL      +   A ++QI Y+IPEEL  GS VG ++KDLGL+ REL  R
Sbjct: 3   RAREAEMMKSQVLFPFLLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTR 62

Query: 67  GVRIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIE 126
            +R+ +      F+++  SG L+  GRIDRE++C +   C + F  + E+ + +F + + 
Sbjct: 63  KLRVSAE---DYFNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVV 119

Query: 127 VTDINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRV 186
           + DINDNAP+F A+ +D++I E+   G++F L  A D DV  NSL+ Y ++PN++FSL  
Sbjct: 120 IQDINDNAPRFVAKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLST 179

Query: 187 QSRANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVF 246
           +   +G KYP L+LE  LDRE ++ H L+LTA DGGDP  SGT  + + V DANDNAPVF
Sbjct: 180 KESPDGSKYPVLLLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVF 239

Query: 247 TLPEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIK 306
           +   YRVS+ EN+P GT +L V ATD+DEG N E+TY+F   P +  L F LN  TG+I 
Sbjct: 240 SQEVYRVSLQENVPWGTSVLRVMATDQDEGINAEITYAFLNSPISTSL-FNLNPNTGDIT 298

Query: 307 ISENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPL 366
            +  LD+EET  Y + ++A+DGG + A   V I + D NDN+PE+T  S  + + EDS L
Sbjct: 299 TNGTLDFEETSRYVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDL 358

Query: 367 GTVVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITV 426
           GTV+AL+ V D DS QNG VTC     +PFKLE +  +YY+LVI  AL+REQ + YN+T+
Sbjct: 359 GTVIALIKVRDKDSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTI 418

Query: 427 TATDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSK 486
            ATD G P LS+     L ++DINDN P F Q SY  ++ ENN  GASI  V+A DPD  
Sbjct: 419 IATDKGKPALSSRTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLG 478

Query: 487 ENAQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPL 546
            N ++ YS+    ++   L SY+S++  +GV++A R+FD+EQ    ++ + A D G P L
Sbjct: 479 PNGRVSYSILASDLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPAL 538

Query: 547 SSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNA 606
           S+NVSL + V D NDNAP +LYPAL  DGS   ++ PR+AEPGYLVTKVVAVD DSG NA
Sbjct: 539 SANVSLRVLVGDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNA 598

Query: 607 WLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTV 666
           WLSY +L+ASEPGLF++G  TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL +
Sbjct: 599 WLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHL 658

Query: 667 AVADSIPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKS 726
             ADS+ +VL DL     P++ +T +L  YLVVA+A +S +FL  VI+ +A RLRR   S
Sbjct: 659 IFADSLQEVLPDLSDRPEPSDPQT-ELQFYLVVALALISVLFLLAVILAIALRLRR---S 714

Query: 727 RLLQASGGGLTGVSGSHFVGVDGVRA-FLQTYSHEVSLTADSRKSHLIFPQPNYADTLIS 785
             L   G   TG+      GV    +     YS+ + + + S K+   F   N    +  
Sbjct: 715 SSLDTEGCFQTGLCSKSGPGVPPNHSEGTLPYSYNLCIASHSAKTE--FNSLNLTPEMAP 772

Query: 786 QESCEKNDPLSLL----DDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGT 841
            +    +DP  ++    +D K   + +    QAPPNTDWRFSQAQRPGTSGSQNGDDTGT
Sbjct: 773 PQDLLCDDPSMVVCASNEDHKIAYDPSLSSHQAPPNTDWRFSQAQRPGTSGSQNGDDTGT 832

Query: 842 WPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYI 901
           WPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYI
Sbjct: 833 WPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYI 892

Query: 902 PGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 936
           PGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 893 PGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 927


>gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score =  919 bits (2374), Expect = 0.0
 Identities = 481/908 (52%), Positives = 624/908 (68%), Gaps = 13/908 (1%)

Query: 34  QISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGRTQLFSLNPRSGSLITAGR 93
           QI YSIPEEL K S VGN++KDLGL+ R+L  R +R+ +    + F++NP SG L+ + R
Sbjct: 32  QIRYSIPEELAKNSVVGNLAKDLGLSVRDLPARKLRVSAE--KEYFTVNPESGDLLVSDR 89

Query: 94  IDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAPKFQAENLDVKINENVAAG 153
           IDRE++C +   CV+ F+ + E+ + +F I + V DINDN P F+   +++KI E+   G
Sbjct: 90  IDREQICGKQPLCVLDFDTVAENPLNIFYIAVIVQDINDNTPLFKQTKINLKIGESTKPG 149

Query: 154 MRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKYPELVLEHSLDREEEAIHH 213
             FPL  A+D DVG NSLQ Y L+ N++F L  +   +G KYPEL+L+HSLDREE ++H 
Sbjct: 150 TTFPLDPALDSDVGPNSLQRYHLNDNEYFDLAEKQTPDGRKYPELILKHSLDREEHSLHQ 209

Query: 214 LVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSVPENLPVGTQLLTVTATDR 273
           LVLTA DGGDP +SGT  + + V DANDN PVF+   YRV++ E++P G  +L VTATDR
Sbjct: 210 LVLTAVDGGDPPQSGTTQIRIKVTDANDNPPVFSQDVYRVTLREDVPPGFFVLQVTATDR 269

Query: 274 DEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEETGFYEIEIQAEDGGAYLA 333
           DEG N E+TYSF  + +     F LN+ TGEI   ++LD+E    Y + I+A+D G   A
Sbjct: 270 DEGINAEITYSFHNVDEQVKHFFNLNEKTGEITTKDDLDFEIASSYTLSIEAKDPGDLAA 329

Query: 334 TAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNVHDLDSEQNGQVTCSILAY 393
              + + + D ND +PE+ +TS+ +P+ EDSP GTV+AL+   D DS +NG+V C +L  
Sbjct: 330 HCSIQVEILDDNDCAPEVIVTSVSTPLPEDSPPGTVIALIKTRDRDSGENGEVYCQVLGN 389

Query: 394 LPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPPLSTEAHFMLQVADINDNP 453
             F L+ S  +YY+LV   ALDRE++  YN+T+TATDGG PPLS+     L ++D+NDN 
Sbjct: 390 AKFILKSSSKNYYKLVTDGALDREEIPEYNLTITATDGGKPPLSSSIIVTLHISDVNDNA 449

Query: 454 PTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSLAEDTIQGVPLSSYISINS 513
           P F Q SY  ++ ENN  GASI  ++A DPD   + Q+ YS+    ++   + SY+S+++
Sbjct: 450 PVFQQTSYMVHVAENNPPGASIAQISASDPDLGPSGQVSYSIVASDLKPREILSYVSVSA 509

Query: 514 DTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLFVLDQNDNAPEILYPALPT 573
            +GV++A R+FD+EQ    ++ + A D G P LS+NVSL + V D NDNAP +LYPAL  
Sbjct: 510 QSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGDLNDNAPRVLYPALGP 569

Query: 574 DGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFAVGEHTGEVRTA 633
           DGS   ++ PR+AEPGYLVTKVVAVD DSG NAWLSY +L+ASEPGLF++G  TGEVRTA
Sbjct: 570 DGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGLFSLGLRTGEVRTA 629

Query: 634 RALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVLADLGSFESPANSETSDL 693
           RAL DRDA +Q L+VAV+D GQPPLSAT TL +  ADS+ +VL DL     P++ + + L
Sbjct: 630 RALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLPDLSDRREPSDPQ-AKL 688

Query: 694 TLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLTGVSGSHFVGVDGVRAF 753
             YLVVA+A +S +F   VI+ ++ RLR   +S        GL+   G     +      
Sbjct: 689 QFYLVVALALISVLFFLAVILAISLRLRLSSRSDAWDCFQPGLSSKPGPGV--LPNYSEG 746

Query: 754 LQTYSHEVSLTADSRKSHLIF----PQPNYADTLI-SQESCEKNDPLSLLDDSKFPIEDT 808
              YS+ + + + S K+   F    P+   A  L+    S E+N        +  P    
Sbjct: 747 TLPYSYNLCVASQSAKTEFNFLNITPELVPAQDLVCDNASWEQNTNHGA---AGVPFASD 803

Query: 809 PLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSS 868
            ++ QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSS
Sbjct: 804 TILKQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSS 863

Query: 869 TLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKK 928
           TLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKK
Sbjct: 864 TLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKK 923

Query: 929 KSGKKEKK 936
           KSGKKEKK
Sbjct: 924 KSGKKEKK 931


>gi|11128027 protocadherin gamma subfamily B, 7 isoform 1 precursor
           [Homo sapiens]
          Length = 929

 Score =  914 bits (2362), Expect = 0.0
 Identities = 488/940 (51%), Positives = 638/940 (67%), Gaps = 22/940 (2%)

Query: 3   AQRNRSKESKDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRE 62
           AQR R+   +     VL  L   + +      I YSIPEEL KGS VGN++KDLGL+  +
Sbjct: 6   AQRRRAGPRQ-----VLFPLLLPLFYPTLCEPIRYSIPEELAKGSVVGNLAKDLGLSVLD 60

Query: 63  LAERGVRIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFG 122
           ++ R +R+ +      FS++ +SG L+   RIDRE++C +  RC +    +VE+ + +F 
Sbjct: 61  VSARELRVSAEKLH--FSVDAQSGDLLVKDRIDREQICKERRRCELQLEAVVENPLNIFH 118

Query: 123 IEIEVTDINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHF 182
           + + + D+ND+AP+F+ + ++++I+E+V+ GM   L  A DPD+ +NSL  YQLSPN++F
Sbjct: 119 VIVVIEDVNDHAPQFRKDEINLEISESVSLGMGTILESAEDPDISMNSLSKYQLSPNEYF 178

Query: 183 SLRVQSRANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDN 242
           SL  +   +G KYPELVL+ +LDRE ++ HHLVLTA DGGDP RSGT  + + V DANDN
Sbjct: 179 SLVEKDNPDGGKYPELVLQKTLDRETQSAHHLVLTALDGGDPPRSGTAQIRILVIDANDN 238

Query: 243 APVFTLPEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYT 302
            PVF+   YRVS+ E++P GT +L V ATD+DEG N E+TYSF  + D     F L+  T
Sbjct: 239 PPVFSQDVYRVSLREDVPPGTSILRVKATDQDEGINSEITYSFFGVADKAQHVFSLDYTT 298

Query: 303 GEIKISENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTE 362
           G I   + LD+EE   Y I I+A+D G+     KV++ V D NDNSPE+ ITSL   + E
Sbjct: 299 GNILTQQPLDFEEVERYTINIEAKDRGSLSTRCKVIVEVVDENDNSPEIIITSLSDQIME 358

Query: 363 DSPLGTVVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSY 422
           DSP G VVAL    D DS +NG+V CS+   +PFK+  S ++YY+LV   ALDREQ   Y
Sbjct: 359 DSPPGVVVALFKTRDQDSGENGEVRCSLSRGVPFKIHSSSNNYYKLVTDEALDREQTPEY 418

Query: 423 NITVTATDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALD 482
           N+T+ ATD G PPLS+     L + D+NDN P F Q +Y  ++PENN  GASI  V+A D
Sbjct: 419 NVTIAATDRGKPPLSSSKTITLHITDVNDNAPVFGQSAYLVHVPENNQPGASIAQVSASD 478

Query: 483 PDSKENAQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSG 542
           PD   N ++ YSL    ++   LSSY+S+++ +GV++A R+FD+EQ    ++ + A D G
Sbjct: 479 PDFGLNGRVSYSLIASDLESRTLSSYVSVSAQSGVVFAQRAFDHEQLRTFELTLQARDQG 538

Query: 543 DPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDS 602
            P LS+NVSL + V D+NDNAP +LYPAL  DGS   +  PR+A+PGYLVTKVVAVD DS
Sbjct: 539 SPALSANVSLRVLVGDRNDNAPRVLYPALGPDGSALFDTVPRAAQPGYLVTKVVAVDADS 598

Query: 603 GQNAWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATV 662
           G NAWLSY +++ASEPGLF++G  TGEVR  RAL D+D+++Q L+VAV+D GQPPLSAT 
Sbjct: 599 GHNAWLSYHVVQASEPGLFSLGLRTGEVRMVRALGDKDSVRQRLLVAVRDGGQPPLSATA 658

Query: 663 TLTVAVADSIPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRR 722
           TL +  ADS+ +VL D     +P++S+ +++  YLVVA+A +S +FL  VI+ +A RLR+
Sbjct: 659 TLHLVFADSLQEVLPDFSDHPTPSDSQ-AEMQFYLVVALALISVLFLLAVILAIALRLRQ 717

Query: 723 WHKSRLLQASGGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADT 782
                        L   SG   VG          Y++   +  D        P+ N+  +
Sbjct: 718 SFSPTAGDCFESVLCSKSGP--VGPPNYSEGTLPYAYNFCVPGDQMN-----PEFNFFTS 770

Query: 783 L----ISQESCEKNDPL--SLLDDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNG 836
           +     +Q++  K+  L  S+L  S    +   L  QAPPNTDWRFSQAQRPGTSGSQNG
Sbjct: 771 VDHCPATQDNLNKDSMLLASILTPS-VEADKKILKQQAPPNTDWRFSQAQRPGTSGSQNG 829

Query: 837 DDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYR 896
           DDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYR
Sbjct: 830 DDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYR 889

Query: 897 QNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 936
           QNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 890 QNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 929


>gi|11128029 protocadherin gamma subfamily B, 6 isoform 1 precursor
           [Homo sapiens]
          Length = 930

 Score =  904 bits (2336), Expect = 0.0
 Identities = 488/939 (51%), Positives = 627/939 (66%), Gaps = 19/939 (2%)

Query: 3   AQRNRSKESKDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRE 62
           AQR R+   +     VL  L   + +   +  I YSIPEEL KGS VGN++KDLGL+  +
Sbjct: 6   AQRRRAGPRQ-----VLFPLLLPLFYPTLSEPIRYSIPEELAKGSVVGNLAKDLGLSVLD 60

Query: 63  LAERGVRIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFG 122
           ++ R +R+ +      FS++  SG L+   RIDRE++C +  RC +    +VE+ + +F 
Sbjct: 61  VSARKLRVSAEKLH--FSVDAESGDLLVKNRIDREQICKERRRCELQLEAVVENPLNIFH 118

Query: 123 IEIEVTDINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHF 182
           + + + D+ND+AP+F  + + ++I E+ +AG R  L  A DPD+ +NS++ Y+++ N +F
Sbjct: 119 VIVVIEDVNDHAPQFDKKEIHLEIFESASAGTRLSLDPATDPDININSIKDYKINSNPYF 178

Query: 183 SLRVQSRANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDN 242
           SL V+  ++G KYPEL LE  LDREE+  H L+LTA DGGDP RS T  + ++V D NDN
Sbjct: 179 SLMVRVNSDGGKYPELSLEKLLDREEQRSHSLILTALDGGDPPRSATAHIEISVKDTNDN 238

Query: 243 APVFTLPEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYT 302
            PVF+  EYR+S+ ENLP G+ +L VTATD+DEG N E+ Y FR    +    F L++ T
Sbjct: 239 PPVFSRDEYRISLSENLPPGSPVLQVTATDQDEGVNAEINYYFRSTAQSTKHMFSLDEKT 298

Query: 303 GEIKISENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTE 362
           G IK +++ D+E+   Y +E++A+DGG      KV+I + D NDNSPE+ ITSL   + E
Sbjct: 299 GMIKNNQSFDFEDVERYTMEVEAKDGGGLSTQCKVIIEILDENDNSPEIIITSLSDQILE 358

Query: 363 DSPLGTVVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSY 422
           +SP G VVAL    DLD   NG+V C+I   +PFK+  S ++YY+LV   ALDREQ   Y
Sbjct: 359 NSPPGMVVALFKTRDLDFGGNGEVRCNIETDIPFKIYSSSNNYYKLVTDGALDREQTPEY 418

Query: 423 NITVTATDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALD 482
           N+T+ ATD G PPLS+     L VADINDN P F Q SY  ++ ENN  GASI  V+A D
Sbjct: 419 NVTIVATDRGKPPLSSSRSITLYVADINDNAPVFDQTSYVVHVAENNPPGASIAQVSASD 478

Query: 483 PDSKENAQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSG 542
           PD   N  I YS+    ++ + +SSY+S+++ +GV++A R+FD+EQ     + + A D G
Sbjct: 479 PDLGLNGHISYSIVASDLEPLAVSSYVSVSAQSGVVFAQRAFDHEQLRAFALTLQARDHG 538

Query: 543 DPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDS 602
            P LS+NVSL + V D+NDNAP +LYPAL  DGS   ++ PRSAEPGYLVTKVVAVD DS
Sbjct: 539 SPTLSANVSLRVLVGDRNDNAPRVLYPALGPDGSAFFDMVPRSAEPGYLVTKVVAVDADS 598

Query: 603 GQNAWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATV 662
           G NAWLSY +L+ASEPGLF++G  TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT 
Sbjct: 599 GHNAWLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATA 658

Query: 663 TLTVAVADSIPQVLADLGSFESPANSE-TSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLR 721
           TL +  AD++ ++L DL   + P  S+  ++L  YLVVA+A +S +FL  VI+ +A RLR
Sbjct: 659 TLHLVFADNLQEILPDLS--DRPVLSDPQAELQFYLVVALALISVLFLLAVILAIALRLR 716

Query: 722 RWHKSRLLQASGGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIF----PQP 777
           R            GL   SG   V           YS+ + +     K         P  
Sbjct: 717 RSLSPATWDCFHPGLCVKSGP--VVPPNYSEGTLPYSYNLCIAHTGTKEFNFLKCSVPLH 774

Query: 778 NYADTLISQESCEKNDPLSLLDDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGD 837
           +  D + S        P    D +  P     L  QAPPNTDWRFSQAQRPGTSGSQNGD
Sbjct: 775 SNEDMVCSVSPGALIPPHGGEDLTSHP---ETLTSQAPPNTDWRFSQAQRPGTSGSQNGD 831

Query: 838 DTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQ 897
           DTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQ
Sbjct: 832 DTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQ 891

Query: 898 NVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 936
           NVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 892 NVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 930


>gi|11128031 protocadherin gamma subfamily B, 5 isoform 1 precursor
           [Homo sapiens]
          Length = 923

 Score =  895 bits (2313), Expect = 0.0
 Identities = 478/920 (51%), Positives = 615/920 (66%), Gaps = 13/920 (1%)

Query: 18  VLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGRTQ 77
           VL      +   A   QI Y IPEE+ KGS VGN++ DLG + +EL  R +R+ S     
Sbjct: 16  VLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRVSSE--KP 73

Query: 78  LFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAPKF 137
            F+++  SG L+ + R+DREE+C +   C + F  + E+ +  + + +E+ DIND+ PKF
Sbjct: 74  YFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPKF 133

Query: 138 QAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKYPE 197
              + +++I+E+   G RF L  A D D+G+NSLQ Y+LS N  FSL ++ + +G KYPE
Sbjct: 134 TQNSFELQISESAQPGTRFILEVAEDADIGLNSLQKYKLSLNPSFSLIIKEKQDGSKYPE 193

Query: 198 LVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSVPE 257
           L LE +LDRE+++ H LVLTA DGG P  SGT  + + V DANDN PVF    YRVS+ E
Sbjct: 194 LALEKTLDREQQSYHRLVLTALDGGHPPLSGTTELRIQVTDANDNPPVFNRDVYRVSLRE 253

Query: 258 NLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEETG 317
           N+P GT +L V+ATD+DEG N E+TYSF +        F LN  +GEI   + LD+EET 
Sbjct: 254 NVPPGTTVLQVSATDQDEGINSEITYSFYRTGQI----FSLNSKSGEITTQKKLDFEETK 309

Query: 318 FYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNVHD 377
            Y + ++  DGG  +A   V I ++D NDNSPE+T  SL   + E++  GT++AL+ +HD
Sbjct: 310 EYSMVVEGRDGGGLVAQCTVEINIQDENDNSPEVTFHSLLEMILENAVPGTLIALIKIHD 369

Query: 378 LDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPPLS 437
            DS +NG+V C +   +PFK+  S  + Y+LV    LDREQ   YN+T+TATD G PPLS
Sbjct: 370 QDSGENGEVNCQLQGEVPFKIISSSKNSYKLVTDGTLDREQTPEYNVTITATDRGKPPLS 429

Query: 438 TEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSLAE 497
           +    +L + D+NDN P F Q SY   +PENN  GASI  V A D D   N Q+ YS+  
Sbjct: 430 SSISVILHIRDVNDNAPVFHQASYLVSVPENNPPGASIAQVCASDLDLGLNGQVSYSIMA 489

Query: 498 DTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLFVL 557
             ++ + L+SY+S+++ +GV++A R+FDYEQ    ++ + A D G P LS+NVSL + V 
Sbjct: 490 SDLEPLALASYVSMSAQSGVVFAQRAFDYEQLRTFELTLQARDQGSPALSANVSLRVLVG 549

Query: 558 DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASE 617
           D+NDNAP +LYPAL  DGS   ++ PR+AEPGYLVTKVVAVD DSG NAWLSY +L+ASE
Sbjct: 550 DRNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASE 609

Query: 618 PGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVLA 677
           PGLF++G  TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL +  ADS+ +VL 
Sbjct: 610 PGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLP 669

Query: 678 DLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLT 737
           D+     P++ + ++L  YLVVA+A +S +FL  VI+ +A RLRR            GL 
Sbjct: 670 DITDRPVPSDPQ-AELQFYLVVALALISVLFLLAVILAVALRLRRSSSPAAWSCFQPGLC 728

Query: 738 GVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHL-IFPQPNYADTLISQESCEKNDPLS 796
             SG              +Y+  V+ T  +  + L    Q +    ++  +S     PL 
Sbjct: 729 VKSGPVVPPNYSQGTLPYSYNLCVAHTGKTEFNFLKCSEQLSSGQDILCGDSSGALFPLC 788

Query: 797 LLDDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 856
              +S    E      QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI
Sbjct: 789 NSSESTSHPE-----LQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 843

Query: 857 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 916
           LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD
Sbjct: 844 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 903

Query: 917 GKAPAGGNGNKKKSGKKEKK 936
           GKAPAGGNGNKKKSGKKEKK
Sbjct: 904 GKAPAGGNGNKKKSGKKEKK 923


>gi|11128033 protocadherin gamma subfamily B, 3 isoform 1 precursor
           [Homo sapiens]
          Length = 929

 Score =  892 bits (2306), Expect = 0.0
 Identities = 479/909 (52%), Positives = 613/909 (67%), Gaps = 19/909 (2%)

Query: 35  ISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGRTQLFSLNPRSGSLITAGRI 94
           I Y+IPEEL++GS VGN++KDLG    +L  R +R+++  +   F+++P +G+L+ + RI
Sbjct: 33  IRYAIPEELDRGSLVGNLAKDLGFGVGDLPTRNLRVIAEKK--FFTVSPENGNLLVSDRI 90

Query: 95  DREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAPKFQAENLDVKINENVAAGM 154
           DREE+C + + CV+ F ++ E  +  F + + + DINDN P F     +++I+E    G 
Sbjct: 91  DREEICGKKSTCVLEFEMVAEKPLNFFHVTVLIQDINDNPPTFSQNITELEISELALTGA 150

Query: 155 RFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKYPELVLEHSLDREEEAIHHL 214
            F L  A DPDVGVNSLQ Y LSP+ HFSL  +   +G +YPELVL+  LDREE+  HHL
Sbjct: 151 TFALESAQDPDVGVNSLQQYYLSPDPHFSLIQKENLDGSRYPELVLKAPLDREEQPHHHL 210

Query: 215 VLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSVPENLPVGTQLLTVTATDRD 274
           VLTA DGG+P RS T  + V V DANDN PVFT   YRV+V ENLP G+ +L V A D D
Sbjct: 211 VLTAVDGGEPSRSCTTQIRVIVADANDNPPVFTQDMYRVNVAENLPAGSSVLKVMAIDMD 270

Query: 275 EGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEETGFYEIEIQAEDGGAYLAT 334
           EG N E+ Y+F  +       F+L+  TGE+     LD+EE   Y I ++A+DGG + A 
Sbjct: 271 EGINAEIIYAFINIGKEVRQLFKLDSKTGELTTIGELDFEERDSYTIGVEAKDGGHHTAY 330

Query: 335 AKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNVHDLDSEQNGQVTCSILAYL 394
            KV I + D NDN+PE+T+ S    + ED+ LGT VAL+  HDLDS  NG++ C +    
Sbjct: 331 CKVQIDISDENDNAPEITLASESQHIQEDAELGTAVALIKTHDLDSGFNGEILCQLKGNF 390

Query: 395 PFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPPLSTEAHFMLQVADINDNPP 454
           PFK+ +   + YRLV   ALDREQ+  YN+T+TATD G+PPLS+     L + D+NDN P
Sbjct: 391 PFKIVQDTKNTYRLVTDGALDREQIPEYNVTITATDKGNPPLSSSKTITLHILDVNDNVP 450

Query: 455 TFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSLAEDTIQGVPLSSYISINSD 514
            F Q SY  ++ ENN  GASI  V A DPD   N  + Y +    ++   LSSY+S+++ 
Sbjct: 451 VFHQASYTVHVAENNPPGASIAHVRASDPDLGPNGLVSYYIVASDLEPRELSSYVSVSAR 510

Query: 515 TGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTD 574
           +GV++A R+FD+EQ    ++ + A D G P LS+NVSL + V D+NDNAP +LYPAL  +
Sbjct: 511 SGVVFAQRAFDHEQLRAFELTLQARDQGSPTLSANVSLRVLVDDRNDNAPLVLYPALGPE 570

Query: 575 GSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFAVGEHTGEVRTAR 634
           GS   ++ PRSAEPGYLVTKVVAVD DSG NAWLSY +++ASEPGLF++G  TGEVRTAR
Sbjct: 571 GSALFDMVPRSAEPGYLVTKVVAVDADSGYNAWLSYHIVQASEPGLFSLGLRTGEVRTAR 630

Query: 635 ALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVLADLGSFESPANSETSDLT 694
            L DR+A +Q L+V V+D GQ PLSATV L +  ADS+ ++  DL    +P++ + ++L 
Sbjct: 631 TLGDREAARQRLLVTVRDGGQQPLSATVMLHLIFADSLQEIQPDLSDRPTPSDPQ-AELQ 689

Query: 695 LYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLTGVSGSHFVGVDGVRAFL 754
            +LVVA+A +S +FL  VI+ ++ RLR    S      G    GV    F  V GV   L
Sbjct: 690 FHLVVALALISVLFLLAVILAISLRLR---CSSRPATEGYFQPGVC---FKTVPGV---L 740

Query: 755 QTYS-----HEVSLTADSRKSHLIFPQPNY-ADTLISQE-SCEKNDPLSLLDDSKFPIED 807
            TYS     +  +  A S  S+  F   N  A+    Q+  C++       D+ + P   
Sbjct: 741 PTYSERTLPYSYNPCAASHSSNTEFKFLNIKAENAAPQDLLCDEASWFESNDNPEMPSNS 800

Query: 808 TPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGS 867
             L  QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGS
Sbjct: 801 GNLQKQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGS 860

Query: 868 STLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNK 927
           STLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNK
Sbjct: 861 STLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNK 920

Query: 928 KKSGKKEKK 936
           KKSGKKEKK
Sbjct: 921 KKSGKKEKK 929


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.132    0.375 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,206,218
Number of Sequences: 37866
Number of extensions: 1605184
Number of successful extensions: 10325
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 185
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 3084
Number of HSP's gapped (non-prelim): 662
length of query: 936
length of database: 18,247,518
effective HSP length: 112
effective length of query: 824
effective length of database: 14,006,526
effective search space: 11541377424
effective search space used: 11541377424
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 67 (30.4 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.

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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.