Guide to the Human Genome
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Name: ALDH1A2 Sequence: fasta or formatted (422aa) NCBI GI: 25777728
Description:

aldehyde dehydrogenase 1A2 isoform 3

Referenced in:

Alcohol and Aldehyde Dehydrogenases
Stem Cells and Early Development

Other entries for this name:
alt prot [518aa] aldehyde dehydrogenase 1A2 isoform 1
alt prot [480aa] aldehyde dehydrogenase 1A2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.0         38           2
 C cysteine            1.7          7           2
 D aspartate           4.5         19           2
 E glutamate           6.9         29           2
 F phenylalanine       5.9         25           2
 G glycine            10.2         43           2
 H histidine           0.9          4           1
 I isoleucine          7.3         31           2
 K lysine              5.9         25           2
 L leucine             6.9         29           2
 M methionine          2.4         10           1
 N asparagine          4.3         18           2
 P proline             4.7         20           2
 Q glutamine           4.0         17           1
 R arginine            4.7         20           2
 S serine              4.7         20           2
 T threonine           5.2         22           2
 V valine              7.1         30           2
 W tryptophan          0.9          4           1
 Y tyrosine            2.6         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   aldehyde dehydrogenase 1A2 isoform 3 
ALDH1A2               1.000   aldehyde dehydrogenase 1A2 isoform 1 
ALDH1A2               0.885   aldehyde dehydrogenase 1A2 isoform 2 
ALDH1A1               0.777   aldehyde dehydrogenase 1A1 
ALDH1A3               0.758   aldehyde dehydrogenase 1A3 
ALDH2                 0.727   mitochondrial aldehyde dehydrogenase 2 precursor [Ho...
ALDH1B1               0.723   aldehyde dehydrogenase 1B1 precursor 
ALDH1L1               0.495   aldehyde dehydrogenase 1 family, member L1 
ALDH1L2               0.485   aldehyde dehydrogenase 1 family, member L2 
ALDH9A1               0.364   aldehyde dehydrogenase 9A1 
ALDH8A1               0.340   aldehyde dehydrogenase 8A1 isoform 1 
ALDH5A1               0.277   aldehyde dehydrogenase 5A1 isoform 2 precursor 
ALDH5A1               0.265   aldehyde dehydrogenase 5A1 isoform 1 precursor [Homo...
ALDH8A1               0.258   aldehyde dehydrogenase 8A1 isoform 2 
ALDH7A1               0.200   aldehyde dehydrogenase 7 family, member A1 
ALDH6A1               0.189   aldehyde dehydrogenase 6A1 precursor 
ALDH16A1              0.153   aldehyde dehydrogenase 16 family, member A1 isoform...
ALDH4A1               0.136   aldehyde dehydrogenase 4A1 isoform a precursor [Homo...
ALDH4A1               0.136   aldehyde dehydrogenase 4A1 isoform b 
ALDH4A1               0.136   aldehyde dehydrogenase 4A1 isoform a precursor [Homo...
ALDH3A1               0.135   aldehyde dehydrogenase 3A1 
ALDH3A1               0.135   aldehyde dehydrogenase 3A1 
ALDH3A1               0.135   aldehyde dehydrogenase 3A1 
ALDH3A2               0.131   aldehyde dehydrogenase 3A2 isoform 2 
ALDH3A2               0.131   aldehyde dehydrogenase 3A2 isoform 1 
ALDH3B1               0.124   aldehyde dehydrogenase 3B1 isoform a 
ALDH3B1               0.124   aldehyde dehydrogenase 3B1 isoform b 
ALDH3B1               0.124   aldehyde dehydrogenase 3B1 isoform a 
ALDH3B2               0.118   aldehyde dehydrogenase 3B2 
ALDH3B2               0.118   aldehyde dehydrogenase 3B2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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