Guide to the Human Genome
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Name: ALDH4A1 Sequence: fasta or formatted (563aa) NCBI GI: 25777736
Description:

aldehyde dehydrogenase 4A1 isoform a precursor

Referenced in:

Amino Acid Catabolism
Alcohol and Aldehyde Dehydrogenases
Mitochondria

Other entries for this name:
alt prot [503aa] aldehyde dehydrogenase 4A1 isoform b
alt mRNA [563aa] aldehyde dehydrogenase 4A1 isoform a precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.1         57           3
 C cysteine            1.4          8           1
 D aspartate           5.2         29           2
 E glutamate           5.3         30           2
 F phenylalanine       5.0         28           2
 G glycine             8.0         45           2
 H histidine           2.3         13           1
 I isoleucine          4.8         27           2
 K lysine              6.4         36           2
 L leucine             8.3         47           2
 M methionine          1.4          8           1
 N asparagine          2.8         16           1
 P proline             6.2         35           2
 Q glutamine           3.9         22           2
 R arginine            4.6         26           2
 S serine              7.3         41           2
 T threonine           4.8         27           2
 V valine              7.3         41           2
 W tryptophan          1.8         10           1
 Y tyrosine            3.0         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   aldehyde dehydrogenase 4A1 isoform a precursor [Homo... 
ALDH4A1               1.000   aldehyde dehydrogenase 4A1 isoform a precursor [Homo...
ALDH4A1               0.894   aldehyde dehydrogenase 4A1 isoform b 
ALDH1A3               0.117   aldehyde dehydrogenase 1A3 
ALDH1A1               0.115   aldehyde dehydrogenase 1A1 
ALDH9A1               0.112   aldehyde dehydrogenase 9A1 
ALDH1A2               0.110   aldehyde dehydrogenase 1A2 isoform 1 
ALDH1B1               0.102   aldehyde dehydrogenase 1B1 precursor 
ALDH2                 0.100   mitochondrial aldehyde dehydrogenase 2 precursor [Ho...
ALDH1A2               0.100   aldehyde dehydrogenase 1A2 isoform 3 
ALDH8A1               0.098   aldehyde dehydrogenase 8A1 isoform 1 
ALDH1L2               0.098   aldehyde dehydrogenase 1 family, member L2 
ALDH1L1               0.091   aldehyde dehydrogenase 1 family, member L1 
ALDH7A1               0.079   aldehyde dehydrogenase 7 family, member A1 
ALDH1A2               0.073   aldehyde dehydrogenase 1A2 isoform 2 
ALDH8A1               0.066   aldehyde dehydrogenase 8A1 isoform 2 
ALDH5A1               0.065   aldehyde dehydrogenase 5A1 isoform 2 precursor 
ALDH5A1               0.057   aldehyde dehydrogenase 5A1 isoform 1 precursor [Homo...
ALDH6A1               0.053   aldehyde dehydrogenase 6A1 precursor 
ALDH3A1               0.048   aldehyde dehydrogenase 3A1 
ALDH3A1               0.048   aldehyde dehydrogenase 3A1 
ALDH3A1               0.048   aldehyde dehydrogenase 3A1 
ALDH3B1               0.041   aldehyde dehydrogenase 3B1 isoform a 
ALDH3B1               0.041   aldehyde dehydrogenase 3B1 isoform b 
ALDH3B1               0.041   aldehyde dehydrogenase 3B1 isoform a 
ALDH16A1              0.035   aldehyde dehydrogenase 16 family, member A1 isoform...
ALDH3A2               0.035   aldehyde dehydrogenase 3A2 isoform 2 
ALDH3A2               0.035   aldehyde dehydrogenase 3A2 isoform 1 
ALDH3B2               0.034   aldehyde dehydrogenase 3B2 
ALDH3B2               0.034   aldehyde dehydrogenase 3B2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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