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Name: ALDH5A1 Sequence: fasta or formatted (548aa) NCBI GI: 25777721
Description:

aldehyde dehydrogenase 5A1 isoform 1 precursor

Referenced in:

Alcohol and Aldehyde Dehydrogenases
GABA and Glycine
Mitochondria

Other entries for this name:
alt prot [535aa] aldehyde dehydrogenase 5A1 isoform 2 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.8         70           3
 C cysteine            2.7         15           1
 D aspartate           3.6         20           2
 E glutamate           6.2         34           3
 F phenylalanine       4.4         24           2
 G glycine             9.7         53           2
 H histidine           1.3          7           2
 I isoleucine          4.4         24           2
 K lysine              5.1         28           2
 L leucine             8.9         49           3
 M methionine          1.6          9           1
 N asparagine          3.3         18           1
 P proline             4.9         27           1
 Q glutamine           3.3         18           1
 R arginine            5.7         31           2
 S serine              5.7         31           2
 T threonine           4.7         26           3
 V valine              8.2         45           3
 W tryptophan          1.3          7           1
 Y tyrosine            2.2         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   aldehyde dehydrogenase 5A1 isoform 1 precursor [Homo... 
ALDH5A1               0.967   aldehyde dehydrogenase 5A1 isoform 2 precursor 
ALDH8A1               0.234   aldehyde dehydrogenase 8A1 isoform 1 
ALDH1L1               0.227   aldehyde dehydrogenase 1 family, member L1 
ALDH1A2               0.224   aldehyde dehydrogenase 1A2 isoform 1 
ALDH1L2               0.219   aldehyde dehydrogenase 1 family, member L2 
ALDH9A1               0.218   aldehyde dehydrogenase 9A1 
ALDH1A1               0.212   aldehyde dehydrogenase 1A1 
ALDH1A3               0.211   aldehyde dehydrogenase 1A3 
ALDH1B1               0.209   aldehyde dehydrogenase 1B1 precursor 
ALDH2                 0.208   mitochondrial aldehyde dehydrogenase 2 precursor [Ho...
ALDH1A2               0.203   aldehyde dehydrogenase 1A2 isoform 3 
ALDH1A2               0.184   aldehyde dehydrogenase 1A2 isoform 2 
ALDH8A1               0.181   aldehyde dehydrogenase 8A1 isoform 2 
ALDH6A1               0.153   aldehyde dehydrogenase 6A1 precursor 
ALDH7A1               0.140   aldehyde dehydrogenase 7 family, member A1 
ALDH16A1              0.104   aldehyde dehydrogenase 16 family, member A1 isoform...
ALDH3A1               0.102   aldehyde dehydrogenase 3A1 
ALDH3A1               0.102   aldehyde dehydrogenase 3A1 
ALDH3A1               0.102   aldehyde dehydrogenase 3A1 
ALDH3B2               0.102   aldehyde dehydrogenase 3B2 
ALDH3B2               0.102   aldehyde dehydrogenase 3B2 
ALDH3B1               0.096   aldehyde dehydrogenase 3B1 isoform b 
ALDH3B1               0.095   aldehyde dehydrogenase 3B1 isoform a 
ALDH3B1               0.095   aldehyde dehydrogenase 3B1 isoform a 
ALDH3A2               0.093   aldehyde dehydrogenase 3A2 isoform 2 
ALDH3A2               0.093   aldehyde dehydrogenase 3A2 isoform 1 
ALDH16A1              0.070   aldehyde dehydrogenase 16 family, member A1 isoform...
ALDH4A1               0.060   aldehyde dehydrogenase 4A1 isoform a precursor [Homo...
ALDH4A1               0.060   aldehyde dehydrogenase 4A1 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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