Guide to the Human Genome
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Name: ALDH1A3 Sequence: fasta or formatted (512aa) NCBI GI: 153266822
Description:

aldehyde dehydrogenase 1A3

Referenced in:

Alcohol and Aldehyde Dehydrogenases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.6         49           2
 C cysteine            2.7         14           2
 D aspartate           4.7         24           2
 E glutamate           7.6         39           2
 F phenylalanine       5.1         26           2
 G glycine             8.0         41           2
 H histidine           1.2          6           1
 I isoleucine          5.3         27           1
 K lysine              7.8         40           2
 L leucine             8.4         43           2
 M methionine          1.4          7           1
 N asparagine          4.1         21           2
 P proline             5.9         30           2
 Q glutamine           3.5         18           1
 R arginine            4.5         23           2
 S serine              4.3         22           2
 T threonine           5.9         30           1
 V valine              7.2         37           2
 W tryptophan          1.2          6           1
 Y tyrosine            1.8          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   aldehyde dehydrogenase 1A3 
ALDH1A2               0.713   aldehyde dehydrogenase 1A2 isoform 1 
ALDH1A1               0.701   aldehyde dehydrogenase 1A1 
ALDH2                 0.643   mitochondrial aldehyde dehydrogenase 2 precursor [Ho...
ALDH1A2               0.632   aldehyde dehydrogenase 1A2 isoform 2 
ALDH1B1               0.627   aldehyde dehydrogenase 1B1 precursor 
ALDH1A2               0.618   aldehyde dehydrogenase 1A2 isoform 3 
ALDH1L2               0.434   aldehyde dehydrogenase 1 family, member L2 
ALDH1L1               0.428   aldehyde dehydrogenase 1 family, member L1 
ALDH8A1               0.304   aldehyde dehydrogenase 8A1 isoform 1 
ALDH9A1               0.296   aldehyde dehydrogenase 9A1 
ALDH8A1               0.241   aldehyde dehydrogenase 8A1 isoform 2 
ALDH5A1               0.233   aldehyde dehydrogenase 5A1 isoform 2 precursor 
ALDH5A1               0.223   aldehyde dehydrogenase 5A1 isoform 1 precursor [Homo...
ALDH6A1               0.196   aldehyde dehydrogenase 6A1 precursor 
ALDH7A1               0.179   aldehyde dehydrogenase 7 family, member A1 
ALDH16A1              0.135   aldehyde dehydrogenase 16 family, member A1 isoform...
ALDH3A1               0.132   aldehyde dehydrogenase 3A1 
ALDH3A1               0.132   aldehyde dehydrogenase 3A1 
ALDH3A1               0.132   aldehyde dehydrogenase 3A1 
ALDH4A1               0.129   aldehyde dehydrogenase 4A1 isoform a precursor [Homo...
ALDH4A1               0.129   aldehyde dehydrogenase 4A1 isoform b 
ALDH4A1               0.129   aldehyde dehydrogenase 4A1 isoform a precursor [Homo...
ALDH3A2               0.122   aldehyde dehydrogenase 3A2 isoform 2 
ALDH3A2               0.122   aldehyde dehydrogenase 3A2 isoform 1 
ALDH3B1               0.115   aldehyde dehydrogenase 3B1 isoform a 
ALDH3B1               0.115   aldehyde dehydrogenase 3B1 isoform b 
ALDH3B1               0.115   aldehyde dehydrogenase 3B1 isoform a 
ALDH3B2               0.115   aldehyde dehydrogenase 3B2 
ALDH3B2               0.115   aldehyde dehydrogenase 3B2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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