Guide to the Human Genome
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Search of human proteins with 169170942

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169170942 PREDICTED: hypothetical protein LOC256227 [Homo
sapiens]
         (450 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169171337 PREDICTED: similar to Six transmembrane epithelial ...   922   0.0  
gi|169170942 PREDICTED: hypothetical protein LOC256227 [Homo sap...   922   0.0  
gi|9558759 six transmembrane epithelial antigen of the prostate ...   501   e-142
gi|239749181 PREDICTED: hypothetical protein XP_002346944 [Homo ...   341   7e-94
gi|100913198 six transmembrane epithelial antigen of the prostat...   226   2e-59
gi|100913194 six transmembrane epithelial antigen of the prostat...   226   2e-59
gi|100913196 six transmembrane epithelial antigen of the prostat...   226   2e-59
gi|56549147 dudulin 2 isoform b [Homo sapiens]                        206   3e-53
gi|56549145 dudulin 2 isoform a [Homo sapiens]                        206   3e-53
gi|59853425 dudulin 2 isoform b [Homo sapiens]                        206   3e-53
gi|100815815 tumor necrosis factor, alpha-induced protein 9 [Hom...   184   1e-46
gi|239753758 PREDICTED: hypothetical protein LOC401106 [Homo sap...    36   0.081
gi|169166137 PREDICTED: hypothetical protein LOC401106 [Homo sap...    36   0.081
gi|169165128 PREDICTED: hypothetical protein LOC401106 [Homo sap...    36   0.081
gi|239748061 PREDICTED: hypothetical protein XP_002346523 [Homo ...    35   0.18 
gi|239741954 PREDICTED: hypothetical protein XP_002342361 [Homo ...    35   0.18 
gi|5032169 telomeric repeat binding factor 2 [Homo sapiens]            35   0.18 
gi|55741571 leucine rich repeat and fibronectin type III domain ...    34   0.24 
gi|42544153 leukocyte receptor tyrosine kinase isoform 1 precurs...    34   0.24 
gi|134142824 forkhead box D2 [Homo sapiens]                            34   0.24 
gi|27436957 membrane associated guanylate kinase, WW and PDZ dom...    34   0.31 
gi|169167967 PREDICTED: hypothetical protein [Homo sapiens]            33   0.40 
gi|169167681 PREDICTED: hypothetical protein [Homo sapiens]            33   0.40 
gi|153792074 proline rich 12 [Homo sapiens]                            33   0.53 
gi|182507165 thymus expressed gene 3-like [Homo sapiens]               33   0.69 
gi|171184447 myozenin 3 [Homo sapiens]                                 32   0.90 
gi|171184445 myozenin 3 [Homo sapiens]                                 32   0.90 
gi|29570782 additional sex combs like 1 [Homo sapiens]                 32   0.90 
gi|150418009 transforming, acidic coiled-coil containing protein...    32   0.90 
gi|56549129 transmembrane anchor protein 1 isoform 3 [Homo sapiens]    32   0.90 

>gi|169171337 PREDICTED: similar to Six transmembrane epithelial
           antigen of prostate [Homo sapiens]
          Length = 450

 Score =  922 bits (2383), Expect = 0.0
 Identities = 450/450 (100%), Positives = 450/450 (100%)

Query: 1   MLNSKHSLSTHQSPTGEKAKAGGRFGATSWCQSHLHTAWSKGIARVPWSQFLPEASSPRA 60
           MLNSKHSLSTHQSPTGEKAKAGGRFGATSWCQSHLHTAWSKGIARVPWSQFLPEASSPRA
Sbjct: 1   MLNSKHSLSTHQSPTGEKAKAGGRFGATSWCQSHLHTAWSKGIARVPWSQFLPEASSPRA 60

Query: 61  PLSHSQQEEAAMNMKDVPEPCGRGAPAGGAGRATDKEAGPAAGLEASRSGGSGAAWGRHL 120
           PLSHSQQEEAAMNMKDVPEPCGRGAPAGGAGRATDKEAGPAAGLEASRSGGSGAAWGRHL
Sbjct: 61  PLSHSQQEEAAMNMKDVPEPCGRGAPAGGAGRATDKEAGPAAGLEASRSGGSGAAWGRHL 120

Query: 121 PAAAAAETHGQATARSGWLKPYYFIELMESRKDITNQEEIWKMKPRRNLEDNDYLHEDTG 180
           PAAAAAETHGQATARSGWLKPYYFIELMESRKDITNQEEIWKMKPRRNLEDNDYLHEDTG
Sbjct: 121 PAAAAAETHGQATARSGWLKPYYFIELMESRKDITNQEEIWKMKPRRNLEDNDYLHEDTG 180

Query: 181 ETSMLKRPVLLHLQQTAHADEFDCPSELQHAQELFPQWHLPIKIAAVMASLTFLYTLLRE 240
           ETSMLKRPVLLHLQQTAHADEFDCPSELQHAQELFPQWHLPIKIAAVMASLTFLYTLLRE
Sbjct: 181 ETSMLKRPVLLHLQQTAHADEFDCPSELQHAQELFPQWHLPIKIAAVMASLTFLYTLLRE 240

Query: 241 VIHPLATSHQQYFYKIPILVINKVLPMVSITLLALVYLPGVIAAIVQVHNGTKYKKFPHW 300
           VIHPLATSHQQYFYKIPILVINKVLPMVSITLLALVYLPGVIAAIVQVHNGTKYKKFPHW
Sbjct: 241 VIHPLATSHQQYFYKIPILVINKVLPMVSITLLALVYLPGVIAAIVQVHNGTKYKKFPHW 300

Query: 301 LDKWMLTRKQFGLLSLFFAVLHAIYTLSYAMRRSYRYKLLNWAYQQVQQNKEDAWIEHDV 360
           LDKWMLTRKQFGLLSLFFAVLHAIYTLSYAMRRSYRYKLLNWAYQQVQQNKEDAWIEHDV
Sbjct: 301 LDKWMLTRKQFGLLSLFFAVLHAIYTLSYAMRRSYRYKLLNWAYQQVQQNKEDAWIEHDV 360

Query: 361 WRMEIYVSLGIVGLAILALLAVTSIPSVSDSLTWREFHYIQGGEYSFTDTFLGKALSELR 420
           WRMEIYVSLGIVGLAILALLAVTSIPSVSDSLTWREFHYIQGGEYSFTDTFLGKALSELR
Sbjct: 361 WRMEIYVSLGIVGLAILALLAVTSIPSVSDSLTWREFHYIQGGEYSFTDTFLGKALSELR 420

Query: 421 RLSQESESVGCHHPQGSLSEGPETGSTRKG 450
           RLSQESESVGCHHPQGSLSEGPETGSTRKG
Sbjct: 421 RLSQESESVGCHHPQGSLSEGPETGSTRKG 450


>gi|169170942 PREDICTED: hypothetical protein LOC256227 [Homo
           sapiens]
          Length = 450

 Score =  922 bits (2383), Expect = 0.0
 Identities = 450/450 (100%), Positives = 450/450 (100%)

Query: 1   MLNSKHSLSTHQSPTGEKAKAGGRFGATSWCQSHLHTAWSKGIARVPWSQFLPEASSPRA 60
           MLNSKHSLSTHQSPTGEKAKAGGRFGATSWCQSHLHTAWSKGIARVPWSQFLPEASSPRA
Sbjct: 1   MLNSKHSLSTHQSPTGEKAKAGGRFGATSWCQSHLHTAWSKGIARVPWSQFLPEASSPRA 60

Query: 61  PLSHSQQEEAAMNMKDVPEPCGRGAPAGGAGRATDKEAGPAAGLEASRSGGSGAAWGRHL 120
           PLSHSQQEEAAMNMKDVPEPCGRGAPAGGAGRATDKEAGPAAGLEASRSGGSGAAWGRHL
Sbjct: 61  PLSHSQQEEAAMNMKDVPEPCGRGAPAGGAGRATDKEAGPAAGLEASRSGGSGAAWGRHL 120

Query: 121 PAAAAAETHGQATARSGWLKPYYFIELMESRKDITNQEEIWKMKPRRNLEDNDYLHEDTG 180
           PAAAAAETHGQATARSGWLKPYYFIELMESRKDITNQEEIWKMKPRRNLEDNDYLHEDTG
Sbjct: 121 PAAAAAETHGQATARSGWLKPYYFIELMESRKDITNQEEIWKMKPRRNLEDNDYLHEDTG 180

Query: 181 ETSMLKRPVLLHLQQTAHADEFDCPSELQHAQELFPQWHLPIKIAAVMASLTFLYTLLRE 240
           ETSMLKRPVLLHLQQTAHADEFDCPSELQHAQELFPQWHLPIKIAAVMASLTFLYTLLRE
Sbjct: 181 ETSMLKRPVLLHLQQTAHADEFDCPSELQHAQELFPQWHLPIKIAAVMASLTFLYTLLRE 240

Query: 241 VIHPLATSHQQYFYKIPILVINKVLPMVSITLLALVYLPGVIAAIVQVHNGTKYKKFPHW 300
           VIHPLATSHQQYFYKIPILVINKVLPMVSITLLALVYLPGVIAAIVQVHNGTKYKKFPHW
Sbjct: 241 VIHPLATSHQQYFYKIPILVINKVLPMVSITLLALVYLPGVIAAIVQVHNGTKYKKFPHW 300

Query: 301 LDKWMLTRKQFGLLSLFFAVLHAIYTLSYAMRRSYRYKLLNWAYQQVQQNKEDAWIEHDV 360
           LDKWMLTRKQFGLLSLFFAVLHAIYTLSYAMRRSYRYKLLNWAYQQVQQNKEDAWIEHDV
Sbjct: 301 LDKWMLTRKQFGLLSLFFAVLHAIYTLSYAMRRSYRYKLLNWAYQQVQQNKEDAWIEHDV 360

Query: 361 WRMEIYVSLGIVGLAILALLAVTSIPSVSDSLTWREFHYIQGGEYSFTDTFLGKALSELR 420
           WRMEIYVSLGIVGLAILALLAVTSIPSVSDSLTWREFHYIQGGEYSFTDTFLGKALSELR
Sbjct: 361 WRMEIYVSLGIVGLAILALLAVTSIPSVSDSLTWREFHYIQGGEYSFTDTFLGKALSELR 420

Query: 421 RLSQESESVGCHHPQGSLSEGPETGSTRKG 450
           RLSQESESVGCHHPQGSLSEGPETGSTRKG
Sbjct: 421 RLSQESESVGCHHPQGSLSEGPETGSTRKG 450


>gi|9558759 six transmembrane epithelial antigen of the prostate
           [Homo sapiens]
          Length = 339

 Score =  501 bits (1291), Expect = e-142
 Identities = 242/254 (95%), Positives = 250/254 (98%)

Query: 148 MESRKDITNQEEIWKMKPRRNLEDNDYLHEDTGETSMLKRPVLLHLQQTAHADEFDCPSE 207
           MESRKDITNQEE+WKMKPRRNLE++DYLH+DTGETSMLKRPVLLHL QTAHADEFDCPSE
Sbjct: 1   MESRKDITNQEELWKMKPRRNLEEDDYLHKDTGETSMLKRPVLLHLHQTAHADEFDCPSE 60

Query: 208 LQHAQELFPQWHLPIKIAAVMASLTFLYTLLREVIHPLATSHQQYFYKIPILVINKVLPM 267
           LQH QELFPQWHLPIKIAA++ASLTFLYTLLREVIHPLATSHQQYFYKIPILVINKVLPM
Sbjct: 61  LQHTQELFPQWHLPIKIAAIIASLTFLYTLLREVIHPLATSHQQYFYKIPILVINKVLPM 120

Query: 268 VSITLLALVYLPGVIAAIVQVHNGTKYKKFPHWLDKWMLTRKQFGLLSLFFAVLHAIYTL 327
           VSITLLALVYLPGVIAAIVQ+HNGTKYKKFPHWLDKWMLTRKQFGLLS FFAVLHAIY+L
Sbjct: 121 VSITLLALVYLPGVIAAIVQLHNGTKYKKFPHWLDKWMLTRKQFGLLSFFFAVLHAIYSL 180

Query: 328 SYAMRRSYRYKLLNWAYQQVQQNKEDAWIEHDVWRMEIYVSLGIVGLAILALLAVTSIPS 387
           SY MRRSYRYKLLNWAYQQVQQNKEDAWIEHDVWRMEIYVSLGIVGLAILALLAVTSIPS
Sbjct: 181 SYPMRRSYRYKLLNWAYQQVQQNKEDAWIEHDVWRMEIYVSLGIVGLAILALLAVTSIPS 240

Query: 388 VSDSLTWREFHYIQ 401
           VSDSLTWREFHYIQ
Sbjct: 241 VSDSLTWREFHYIQ 254


>gi|239749181 PREDICTED: hypothetical protein XP_002346944 [Homo
           sapiens]
          Length = 317

 Score =  341 bits (875), Expect = 7e-94
 Identities = 163/175 (93%), Positives = 168/175 (96%)

Query: 1   MLNSKHSLSTHQSPTGEKAKAGGRFGATSWCQSHLHTAWSKGIARVPWSQFLPEASSPRA 60
           MLNSKHSLSTH+SPTGEKAKAG RFGATSWCQSHLHTAWSKGIARVPW QFLPEASSPRA
Sbjct: 1   MLNSKHSLSTHRSPTGEKAKAGSRFGATSWCQSHLHTAWSKGIARVPWIQFLPEASSPRA 60

Query: 61  PLSHSQQEEAAMNMKDVPEPCGRGAPAGGAGRATDKEAGPAAGLEASRSGGSGAAWGRHL 120
           P SHSQQEEAAMNMKDVPEPCGRGAPAGGAGRATDKEAGPAAGLEA RSGGSGAAWG HL
Sbjct: 61  PPSHSQQEEAAMNMKDVPEPCGRGAPAGGAGRATDKEAGPAAGLEAPRSGGSGAAWGPHL 120

Query: 121 PAAAAAETHGQATARSGWLKPYYFIELMESRKDITNQEEIWKMKPRRNLEDNDYL 175
            AAAAAETHGQA A+SGWLKPYYFIELMESRKDITNQEE+WKMKPRRNLE++DYL
Sbjct: 121 WAAAAAETHGQAKAKSGWLKPYYFIELMESRKDITNQEELWKMKPRRNLEEDDYL 175



 Score =  114 bits (286), Expect = 1e-25
 Identities = 55/56 (98%), Positives = 56/56 (100%)

Query: 346 QVQQNKEDAWIEHDVWRMEIYVSLGIVGLAILALLAVTSIPSVSDSLTWREFHYIQ 401
           +VQQNKEDAWIEHDVWRMEIYVSLGIVGLAILALLAVTSIPSVSDSLTWREFHYIQ
Sbjct: 177 KVQQNKEDAWIEHDVWRMEIYVSLGIVGLAILALLAVTSIPSVSDSLTWREFHYIQ 232


>gi|100913198 six transmembrane epithelial antigen of the prostate 2
           isoform b [Homo sapiens]
          Length = 454

 Score =  226 bits (577), Expect = 2e-59
 Identities = 106/188 (56%), Positives = 142/188 (75%)

Query: 214 LFPQWHLPIKIAAVMASLTFLYTLLREVIHPLATSHQQYFYKIPILVINKVLPMVSITLL 273
           LF  W  P+ +A  +A+  FLY+ +R+VIHP A + Q  FYKIPI ++NK LP+V+ITLL
Sbjct: 208 LFTLWRGPVVVAISLATFFFLYSFVRDVIHPYARNQQSDFYKIPIEIVNKTLPIVAITLL 267

Query: 274 ALVYLPGVIAAIVQVHNGTKYKKFPHWLDKWMLTRKQFGLLSLFFAVLHAIYTLSYAMRR 333
           +LVYL G++AA  Q++ GTKY++FP WL+ W+  RKQ GLLS FFA++H  Y+L   MRR
Sbjct: 268 SLVYLAGLLAAAYQLYYGTKYRRFPPWLETWLQCRKQLGLLSFFFAMVHVAYSLCLPMRR 327

Query: 334 SYRYKLLNWAYQQVQQNKEDAWIEHDVWRMEIYVSLGIVGLAILALLAVTSIPSVSDSLT 393
           S RY  LN AYQQV  N E++W E +VWR+E+Y+S GI+ L +L+LLAVTSIPSVS++L 
Sbjct: 328 SERYLFLNMAYQQVHANIENSWNEEEVWRIEMYISFGIMSLGLLSLLAVTSIPSVSNALN 387

Query: 394 WREFHYIQ 401
           WREF +IQ
Sbjct: 388 WREFSFIQ 395


>gi|100913194 six transmembrane epithelial antigen of the prostate 2
           isoform a [Homo sapiens]
          Length = 490

 Score =  226 bits (577), Expect = 2e-59
 Identities = 106/188 (56%), Positives = 142/188 (75%)

Query: 214 LFPQWHLPIKIAAVMASLTFLYTLLREVIHPLATSHQQYFYKIPILVINKVLPMVSITLL 273
           LF  W  P+ +A  +A+  FLY+ +R+VIHP A + Q  FYKIPI ++NK LP+V+ITLL
Sbjct: 208 LFTLWRGPVVVAISLATFFFLYSFVRDVIHPYARNQQSDFYKIPIEIVNKTLPIVAITLL 267

Query: 274 ALVYLPGVIAAIVQVHNGTKYKKFPHWLDKWMLTRKQFGLLSLFFAVLHAIYTLSYAMRR 333
           +LVYL G++AA  Q++ GTKY++FP WL+ W+  RKQ GLLS FFA++H  Y+L   MRR
Sbjct: 268 SLVYLAGLLAAAYQLYYGTKYRRFPPWLETWLQCRKQLGLLSFFFAMVHVAYSLCLPMRR 327

Query: 334 SYRYKLLNWAYQQVQQNKEDAWIEHDVWRMEIYVSLGIVGLAILALLAVTSIPSVSDSLT 393
           S RY  LN AYQQV  N E++W E +VWR+E+Y+S GI+ L +L+LLAVTSIPSVS++L 
Sbjct: 328 SERYLFLNMAYQQVHANIENSWNEEEVWRIEMYISFGIMSLGLLSLLAVTSIPSVSNALN 387

Query: 394 WREFHYIQ 401
           WREF +IQ
Sbjct: 388 WREFSFIQ 395


>gi|100913196 six transmembrane epithelial antigen of the prostate 2
           isoform a [Homo sapiens]
          Length = 490

 Score =  226 bits (577), Expect = 2e-59
 Identities = 106/188 (56%), Positives = 142/188 (75%)

Query: 214 LFPQWHLPIKIAAVMASLTFLYTLLREVIHPLATSHQQYFYKIPILVINKVLPMVSITLL 273
           LF  W  P+ +A  +A+  FLY+ +R+VIHP A + Q  FYKIPI ++NK LP+V+ITLL
Sbjct: 208 LFTLWRGPVVVAISLATFFFLYSFVRDVIHPYARNQQSDFYKIPIEIVNKTLPIVAITLL 267

Query: 274 ALVYLPGVIAAIVQVHNGTKYKKFPHWLDKWMLTRKQFGLLSLFFAVLHAIYTLSYAMRR 333
           +LVYL G++AA  Q++ GTKY++FP WL+ W+  RKQ GLLS FFA++H  Y+L   MRR
Sbjct: 268 SLVYLAGLLAAAYQLYYGTKYRRFPPWLETWLQCRKQLGLLSFFFAMVHVAYSLCLPMRR 327

Query: 334 SYRYKLLNWAYQQVQQNKEDAWIEHDVWRMEIYVSLGIVGLAILALLAVTSIPSVSDSLT 393
           S RY  LN AYQQV  N E++W E +VWR+E+Y+S GI+ L +L+LLAVTSIPSVS++L 
Sbjct: 328 SERYLFLNMAYQQVHANIENSWNEEEVWRIEMYISFGIMSLGLLSLLAVTSIPSVSNALN 387

Query: 394 WREFHYIQ 401
           WREF +IQ
Sbjct: 388 WREFSFIQ 395


>gi|56549147 dudulin 2 isoform b [Homo sapiens]
          Length = 488

 Score =  206 bits (525), Expect = 3e-53
 Identities = 93/188 (49%), Positives = 131/188 (69%)

Query: 214 LFPQWHLPIKIAAVMASLTFLYTLLREVIHPLATSHQQYFYKIPILVINKVLPMVSITLL 273
           L P W +P  +A  +    + Y  +R+V+ P     Q  F+K+P+ V+N  LP V+  LL
Sbjct: 208 LLPAWKVPTLLALGLFVCFYAYNFVRDVLQPYVQESQNKFFKLPVSVVNTTLPCVAYVLL 267

Query: 274 ALVYLPGVIAAIVQVHNGTKYKKFPHWLDKWMLTRKQFGLLSLFFAVLHAIYTLSYAMRR 333
           +LVYLPGV+AA +Q+  GTKY++FP WLD W+  RKQ GLLS F A LHA+Y+    +RR
Sbjct: 268 SLVYLPGVLAAALQLRRGTKYQRFPDWLDHWLQHRKQIGLLSFFCAALHALYSFCLPLRR 327

Query: 334 SYRYKLLNWAYQQVQQNKEDAWIEHDVWRMEIYVSLGIVGLAILALLAVTSIPSVSDSLT 393
           ++RY L+N A +QV  NK   W+E +VWRMEIY+SLG++ L  L+LLAVTS+PS+++SL 
Sbjct: 328 AHRYDLVNLAVKQVLANKSHLWVEEEVWRMEIYLSLGVLALGTLSLLAVTSLPSIANSLN 387

Query: 394 WREFHYIQ 401
           WREF ++Q
Sbjct: 388 WREFSFVQ 395


>gi|56549145 dudulin 2 isoform a [Homo sapiens]
          Length = 498

 Score =  206 bits (525), Expect = 3e-53
 Identities = 93/188 (49%), Positives = 131/188 (69%)

Query: 214 LFPQWHLPIKIAAVMASLTFLYTLLREVIHPLATSHQQYFYKIPILVINKVLPMVSITLL 273
           L P W +P  +A  +    + Y  +R+V+ P     Q  F+K+P+ V+N  LP V+  LL
Sbjct: 218 LLPAWKVPTLLALGLFVCFYAYNFVRDVLQPYVQESQNKFFKLPVSVVNTTLPCVAYVLL 277

Query: 274 ALVYLPGVIAAIVQVHNGTKYKKFPHWLDKWMLTRKQFGLLSLFFAVLHAIYTLSYAMRR 333
           +LVYLPGV+AA +Q+  GTKY++FP WLD W+  RKQ GLLS F A LHA+Y+    +RR
Sbjct: 278 SLVYLPGVLAAALQLRRGTKYQRFPDWLDHWLQHRKQIGLLSFFCAALHALYSFCLPLRR 337

Query: 334 SYRYKLLNWAYQQVQQNKEDAWIEHDVWRMEIYVSLGIVGLAILALLAVTSIPSVSDSLT 393
           ++RY L+N A +QV  NK   W+E +VWRMEIY+SLG++ L  L+LLAVTS+PS+++SL 
Sbjct: 338 AHRYDLVNLAVKQVLANKSHLWVEEEVWRMEIYLSLGVLALGTLSLLAVTSLPSIANSLN 397

Query: 394 WREFHYIQ 401
           WREF ++Q
Sbjct: 398 WREFSFVQ 405


>gi|59853425 dudulin 2 isoform b [Homo sapiens]
          Length = 488

 Score =  206 bits (525), Expect = 3e-53
 Identities = 93/188 (49%), Positives = 131/188 (69%)

Query: 214 LFPQWHLPIKIAAVMASLTFLYTLLREVIHPLATSHQQYFYKIPILVINKVLPMVSITLL 273
           L P W +P  +A  +    + Y  +R+V+ P     Q  F+K+P+ V+N  LP V+  LL
Sbjct: 208 LLPAWKVPTLLALGLFVCFYAYNFVRDVLQPYVQESQNKFFKLPVSVVNTTLPCVAYVLL 267

Query: 274 ALVYLPGVIAAIVQVHNGTKYKKFPHWLDKWMLTRKQFGLLSLFFAVLHAIYTLSYAMRR 333
           +LVYLPGV+AA +Q+  GTKY++FP WLD W+  RKQ GLLS F A LHA+Y+    +RR
Sbjct: 268 SLVYLPGVLAAALQLRRGTKYQRFPDWLDHWLQHRKQIGLLSFFCAALHALYSFCLPLRR 327

Query: 334 SYRYKLLNWAYQQVQQNKEDAWIEHDVWRMEIYVSLGIVGLAILALLAVTSIPSVSDSLT 393
           ++RY L+N A +QV  NK   W+E +VWRMEIY+SLG++ L  L+LLAVTS+PS+++SL 
Sbjct: 328 AHRYDLVNLAVKQVLANKSHLWVEEEVWRMEIYLSLGVLALGTLSLLAVTSLPSIANSLN 387

Query: 394 WREFHYIQ 401
           WREF ++Q
Sbjct: 388 WREFSFVQ 395


>gi|100815815 tumor necrosis factor, alpha-induced protein 9 [Homo
           sapiens]
          Length = 459

 Score =  184 bits (467), Expect = 1e-46
 Identities = 84/189 (44%), Positives = 126/189 (66%)

Query: 213 ELFPQWHLPIKIAAVMASLTFLYTLLREVIHPLATSHQQYFYKIPILVINKVLPMVSITL 272
           +LFP W  P  ++AV+    F Y ++R+VI+P     +   +++ I + N++ P+ ++TL
Sbjct: 195 QLFPMWRFPFYLSAVLCVFLFFYCVIRDVIYPYVYEKKDNTFRMAISIPNRIFPITALTL 254

Query: 273 LALVYLPGVIAAIVQVHNGTKYKKFPHWLDKWMLTRKQFGLLSLFFAVLHAIYTLSYAMR 332
           LALVYLPGVIAAI+Q++ GTKY++FP WLD WML RKQ GL++L FA LH +YTL   +R
Sbjct: 255 LALVYLPGVIAAILQLYRGTKYRRFPDWLDHWMLCRKQLGLVALGFAFLHVLYTLVIPIR 314

Query: 333 RSYRYKLLNWAYQQVQQNKEDAWIEHDVWRMEIYVSLGIVGLAILALLAVTSIPSVSDSL 392
              R++L N    Q    KE+ +     W  + YV+LGI+G  +  LL +TS+PSVS+++
Sbjct: 315 YYVRWRLGNLTVTQAILKKENPFSTSSAWLSDSYVALGILGFFLFVLLGITSLPSVSNAV 374

Query: 393 TWREFHYIQ 401
            WREF ++Q
Sbjct: 375 NWREFRFVQ 383


>gi|239753758 PREDICTED: hypothetical protein LOC401106 [Homo
           sapiens]
          Length = 297

 Score = 35.8 bits (81), Expect = 0.081
 Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 6/87 (6%)

Query: 58  PRAPLSHSQQEEAAMNMKDVPEPCGRGAPAGGAGRATDKEAGPAAGLEASRSGGSGAAWG 117
           PR P++ +  E A    +  P P  +      +         PAAG      GG G A  
Sbjct: 142 PRPPIAFATLERAKERKRQPPSPPPKQTDKKLSFSYDHGLCAPAAG------GGQGGAHT 195

Query: 118 RHLPAAAAAETHGQATARSGWLKPYYF 144
           R LP A A+   G+   R  W++  YF
Sbjct: 196 RKLPRARASPPTGRRLFRPSWMQIKYF 222


>gi|169166137 PREDICTED: hypothetical protein LOC401106 [Homo
           sapiens]
          Length = 297

 Score = 35.8 bits (81), Expect = 0.081
 Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 6/87 (6%)

Query: 58  PRAPLSHSQQEEAAMNMKDVPEPCGRGAPAGGAGRATDKEAGPAAGLEASRSGGSGAAWG 117
           PR P++ +  E A    +  P P  +      +         PAAG      GG G A  
Sbjct: 142 PRPPIAFATLERAKERKRQPPSPPPKQTDKKLSFSYDHGLCAPAAG------GGQGGAHT 195

Query: 118 RHLPAAAAAETHGQATARSGWLKPYYF 144
           R LP A A+   G+   R  W++  YF
Sbjct: 196 RKLPRARASPPTGRRLFRPSWMQIKYF 222


>gi|169165128 PREDICTED: hypothetical protein LOC401106 [Homo
           sapiens]
          Length = 297

 Score = 35.8 bits (81), Expect = 0.081
 Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 6/87 (6%)

Query: 58  PRAPLSHSQQEEAAMNMKDVPEPCGRGAPAGGAGRATDKEAGPAAGLEASRSGGSGAAWG 117
           PR P++ +  E A    +  P P  +      +         PAAG      GG G A  
Sbjct: 142 PRPPIAFATLERAKERKRQPPSPPPKQTDKKLSFSYDHGLCAPAAG------GGQGGAHT 195

Query: 118 RHLPAAAAAETHGQATARSGWLKPYYF 144
           R LP A A+   G+   R  W++  YF
Sbjct: 196 RKLPRARASPPTGRRLFRPSWMQIKYF 222


>gi|239748061 PREDICTED: hypothetical protein XP_002346523 [Homo
           sapiens]
          Length = 182

 Score = 34.7 bits (78), Expect = 0.18
 Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 10/69 (14%)

Query: 53  PEASSPRAPLSHSQQEEAAMNMKDVP----EPCGRGAPAGGAGRATDKEAGPAAGLEASR 108
           P+A +P  P S      A  N + +P    +P     P    G+ T  EA P  G +A+ 
Sbjct: 101 PQAETPEEPHS------AVPNRRQLPAASEDPFSSHTPLASCGQVTPPEAAPGNGSQATS 154

Query: 109 SGGSGAAWG 117
            GGS  A G
Sbjct: 155 HGGSALAAG 163


>gi|239741954 PREDICTED: hypothetical protein XP_002342361 [Homo
           sapiens]
          Length = 152

 Score = 34.7 bits (78), Expect = 0.18
 Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 10/69 (14%)

Query: 53  PEASSPRAPLSHSQQEEAAMNMKDVP----EPCGRGAPAGGAGRATDKEAGPAAGLEASR 108
           P+A +P  P S      A  N + +P    +P     P    G+ T  EA P  G +A+ 
Sbjct: 71  PQAETPEEPHS------AVPNRRQLPAASEDPFSSHTPLASCGQVTPPEAAPGNGSQATS 124

Query: 109 SGGSGAAWG 117
            GGS  A G
Sbjct: 125 HGGSALAAG 133


>gi|5032169 telomeric repeat binding factor 2 [Homo sapiens]
          Length = 500

 Score = 34.7 bits (78), Expect = 0.18
 Identities = 25/69 (36%), Positives = 32/69 (46%), Gaps = 8/69 (11%)

Query: 87  AGGAGRATDKEAGPAAGLEASRSGGSGAAWGRHLPAAAAAETHGQATAR-----SGWLKP 141
           AGG G +    +G AAG  ASRS G  A  GRH P        G   AR     + W+  
Sbjct: 2   AGGGGSSDG--SGRAAGRRASRSSGR-ARRGRHEPGLGGPAERGAGEARLEEAVNRWVLK 58

Query: 142 YYFIELMES 150
           +YF E + +
Sbjct: 59  FYFHEALRA 67


>gi|55741571 leucine rich repeat and fibronectin type III domain
           containing 2 [Homo sapiens]
          Length = 789

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 11/85 (12%)

Query: 33  SHLHTAWSKGIARVPWSQFLPEASSPRAPLSHSQQEEAAMNMK--------DVPEPCGRG 84
           S L +  + G+ R PW +  P A  P+  L       A++++K        D   P GRG
Sbjct: 625 SSLGSGEAAGLGRAPW-RIPPSAPRPKPSLDRLMGAFASLDLKSQRKEELLDSRTPAGRG 683

Query: 85  APAGGAGRATDKEAGPAAGLEASRS 109
           A     G  +D+E  P  G  A+R+
Sbjct: 684 AGTSARGHHSDRE--PLLGPPAARA 706


>gi|42544153 leukocyte receptor tyrosine kinase isoform 1 precursor
           [Homo sapiens]
          Length = 864

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 25/73 (34%), Positives = 29/73 (39%), Gaps = 4/73 (5%)

Query: 69  EAAMNMKDVPEPCGRGAPAGGAGRATDKEAGPAAG--LEASRSGGSGA--AWGRHLPAAA 124
           E   N  + P   GRG  AGG G  T +   P AG  L+    GG G   AW     AAA
Sbjct: 253 EKLENRSEAPGSGGRGGAAGGGGGWTSRAPSPQAGRSLQEGAEGGQGCSEAWATLGWAAA 312

Query: 125 AAETHGQATARSG 137
                G     +G
Sbjct: 313 GGFGGGGGACTAG 325


>gi|134142824 forkhead box D2 [Homo sapiens]
          Length = 495

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 33/98 (33%), Positives = 39/98 (39%), Gaps = 12/98 (12%)

Query: 52  LPEASSPRAP---LSHSQQ---EEAAMNMKDVPEPCGRGAPAGGAGRATDKEAGPAAGLE 105
           LP  S PRAP   L H  +   EEA  ++ +  E  G G   G       + A  AAG  
Sbjct: 39  LPARSGPRAPRDVLPHGHEPPAEEAEADLAEDEEESG-GCSDGEPRALASRGAAAAAG-- 95

Query: 106 ASRSGGSGAAWGRHLPAAAAAETHGQATARSGWLKPYY 143
              S G GAA  R           G A  RS  +KP Y
Sbjct: 96  ---SPGPGAAAARGAAGPGPGPPSGGAATRSPLVKPPY 130


>gi|27436957 membrane associated guanylate kinase, WW and PDZ domain
            containing 2 [Homo sapiens]
          Length = 1455

 Score = 33.9 bits (76), Expect = 0.31
 Identities = 30/99 (30%), Positives = 38/99 (38%), Gaps = 19/99 (19%)

Query: 43   IARVPWSQFLPEASSP----RAPLSHSQQEEAAMNMKDVPEPCGRGAPAGGAGRATDKEA 98
            +   P  Q  PEA  P    RAP        AA +  D     G+ AP   AG    +  
Sbjct: 1328 LEEAPGGQGRPEAGRPASEARAP------GLAAADAADAARAGGKEAPRAAAGSELCRRE 1381

Query: 99   GPAAGLEASRSGGSGAAWGRHLPAAAAAETHGQATARSG 137
            GP A    +  GG G         + A E  G+A AR+G
Sbjct: 1382 GPGAAPAFAGPGGGG---------SGALEAEGRAGARAG 1411


>gi|169167967 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 460

 Score = 33.5 bits (75), Expect = 0.40
 Identities = 17/60 (28%), Positives = 21/60 (35%)

Query: 82  GRGAPAGGAGRATDKEAGPAAGLEASRSGGSGAAWGRHLPAAAAAETHGQATARSGWLKP 141
           G+G  A GA R  D   GP + L     G     W R    A  +    Q      W +P
Sbjct: 241 GKGQRAAGAERVLDNGRGPRSRLPGLAGGVEPPGWSRERAGAGLSRDSPQVPRSGSWARP 300


>gi|169167681 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 460

 Score = 33.5 bits (75), Expect = 0.40
 Identities = 17/60 (28%), Positives = 21/60 (35%)

Query: 82  GRGAPAGGAGRATDKEAGPAAGLEASRSGGSGAAWGRHLPAAAAAETHGQATARSGWLKP 141
           G+G  A GA R  D   GP + L     G     W R    A  +    Q      W +P
Sbjct: 241 GKGQRAAGAERVLDNGRGPRSRLPGLAGGVEPPGWSRERAGAGLSRDSPQVPRSGSWARP 300


>gi|153792074 proline rich 12 [Homo sapiens]
          Length = 2036

 Score = 33.1 bits (74), Expect = 0.53
 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 11/67 (16%)

Query: 80  PCGRGAPAGGAGR--------ATDKEAGPAAGLEASRSGGSGAAWGRHLPAAAAAETHGQ 131
           P G G P+ GAG         AT   +G A G EA+  GG+G   G + P     ++ G 
Sbjct: 333 PLGGGEPSPGAGEPSKAGPSGATAGASGRATGPEAAGGGGAGGGGGGYRP---IIQSPGY 389

Query: 132 ATARSGW 138
            T + G+
Sbjct: 390 KTGKGGY 396


>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
          Length = 629

 Score = 32.7 bits (73), Expect = 0.69
 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 9/82 (10%)

Query: 80  PCGRGAPAGGAG--------RATDKEAGPAAGLEASRSGGSGAAWGRHLPAAAAAETHGQ 131
           P GR  PAGG G         A++ E+   +   +   G  G  W + L AA AA   G 
Sbjct: 531 PLGRRGPAGGVGGGYGESESSASEGESPAFSSASSDSDGSGGLVWPQQLVAATAASGGGA 590

Query: 132 -ATARSGWLKPYYFIELMESRK 152
            A A +G  K +  I+   + K
Sbjct: 591 GAGAPAGPAKVFVKIKASHALK 612


>gi|171184447 myozenin 3 [Homo sapiens]
          Length = 251

 Score = 32.3 bits (72), Expect = 0.90
 Identities = 29/91 (31%), Positives = 34/91 (37%), Gaps = 6/91 (6%)

Query: 36  HTAWSKGIARVPWSQFLPEASSPRAPLSHSQQEEAAMNMKDVPEPCGRGAPAGGAGR-AT 94
           HTA SKG  R PW +F+          SH+       N    P P G     G   R  T
Sbjct: 157 HTAISKGY-RCPWQEFVSYRDYQSDGRSHTPSPNDYRNFNKTPVPFGGPLVGGTFPRPGT 215

Query: 95  DKEAGPAAGLEASRSGGS----GAAWGRHLP 121
                P +GLE  R   S       W R+LP
Sbjct: 216 PFIPEPLSGLELLRLRPSFNRVAQGWVRNLP 246


>gi|171184445 myozenin 3 [Homo sapiens]
          Length = 251

 Score = 32.3 bits (72), Expect = 0.90
 Identities = 29/91 (31%), Positives = 34/91 (37%), Gaps = 6/91 (6%)

Query: 36  HTAWSKGIARVPWSQFLPEASSPRAPLSHSQQEEAAMNMKDVPEPCGRGAPAGGAGR-AT 94
           HTA SKG  R PW +F+          SH+       N    P P G     G   R  T
Sbjct: 157 HTAISKGY-RCPWQEFVSYRDYQSDGRSHTPSPNDYRNFNKTPVPFGGPLVGGTFPRPGT 215

Query: 95  DKEAGPAAGLEASRSGGS----GAAWGRHLP 121
                P +GLE  R   S       W R+LP
Sbjct: 216 PFIPEPLSGLELLRLRPSFNRVAQGWVRNLP 246


>gi|29570782 additional sex combs like 1 [Homo sapiens]
          Length = 1541

 Score = 32.3 bits (72), Expect = 0.90
 Identities = 24/64 (37%), Positives = 28/64 (43%), Gaps = 9/64 (14%)

Query: 82  GRGAPAGGAGRATDKEAGPAAGLEASRSGGSGAAWGRHLPAAAAAETHGQATA---RSGW 138
           G G P GG G ATD+  G       S SG  G A G H        T G+ T+   R+  
Sbjct: 643 GGGGPGGGGGGATDEGGG-----RGSSSGDGGEACG-HPEPRGGPSTPGKCTSDLQRTQL 696

Query: 139 LKPY 142
           L PY
Sbjct: 697 LPPY 700


>gi|150418009 transforming, acidic coiled-coil containing protein 2
           isoform a [Homo sapiens]
          Length = 2948

 Score = 32.3 bits (72), Expect = 0.90
 Identities = 41/140 (29%), Positives = 54/140 (38%), Gaps = 12/140 (8%)

Query: 12  QSPTGEKA-KAGGRFGATSWCQSHLHTAWSKGIARVPWS--QFLPEASSPRAPLSHSQQE 68
           QSP  E A  A G   A    +    T + + IA VP +  +  P+    ++  S S   
Sbjct: 136 QSPRREPAPNAPGDIAAAFPAERDSSTPYQE-IAAVPSAGRERQPKEEGQKSSFSFSSGI 194

Query: 69  EAAMNMKDVP--EP-----CGRGAPAGGAGRATDKEAGPAAGLEASRSGGSGAAWGRHLP 121
           + +  M  VP  EP     CG G   GG   + +KEA        SR G +        P
Sbjct: 195 DQSPGMSPVPLREPMKAPLCGEGDQPGGF-ESQEKEAAGGFPPAESRQGVASVQVTPEAP 253

Query: 122 AAAAAETHGQATARSGWLKP 141
           AAA   T   A      LKP
Sbjct: 254 AAAQQGTESSAVLEKSPLKP 273


>gi|56549129 transmembrane anchor protein 1 isoform 3 [Homo sapiens]
          Length = 170

 Score = 32.3 bits (72), Expect = 0.90
 Identities = 31/82 (37%), Positives = 34/82 (41%), Gaps = 8/82 (9%)

Query: 55  ASSP---RAPLSHSQQEEAAMNMKDVPEPCGRGAPAGGAGRATDKEAGPAAGL-EASRSG 110
           A+SP   RAP   +   EA       P P    AP   A  A  +E G  AGL E     
Sbjct: 32  AASPEPARAPPEPAPPAEAT----GAPAPSRPCAPEPAASPAGPEEPGEPAGLGELGEPA 87

Query: 111 GSGAAWGRHLPAAAAAETHGQA 132
           G G   G   PAAA AE   QA
Sbjct: 88  GPGEPEGPGDPAAAPAEAEEQA 109


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.132    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,397,855
Number of Sequences: 37866
Number of extensions: 868404
Number of successful extensions: 4021
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 116
Number of HSP's that attempted gapping in prelim test: 3847
Number of HSP's gapped (non-prelim): 264
length of query: 450
length of database: 18,247,518
effective HSP length: 106
effective length of query: 344
effective length of database: 14,233,722
effective search space: 4896400368
effective search space used: 4896400368
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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